Pregenerated sensors for RPL37A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046330

Ensembl transcript IDs: ENSMUST00000059980.11, ENSMUST00000212335.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	GTGACTGCAGAGGTGGTGCTAACAAGACCAGTGCTGATGTCACACTaGCATGGTGGCACCCTTCAAAAGCCAAGACTTGGGGCACTCTCA	+
Preference number: 1 (lower is better) Translates to: VTAEVVLTRPVLMSH*HGGTLQKPRLGALS Trigger: TGAGAGTGCCCCAAGTCTTGGCTTTTGAAGGGTGCCACCATGCCAGTGTGACATCAGCACTGGTCTTGTTAGCACCACCTCTGCAGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212335.2
3UTR CCA 90 bp	TGCAGAGGTGGTGCTAACAAGACCAGTGCTGATGTCACACTGGCATaGTGGCACCCTTCAAAAGCCAAGACTTGGGGCACTCTCACTATT	+
Preference number: 1 (lower is better) Translates to: CRGGANKTSADVTLA*WHPSKAKTWGTLTI Trigger: AATAGTGAGAGTGCCCCAAGTCTTGGCTTTTGAAGGGTGCCACCATGCCAGTGTGACATCAGCACTGGTCTTGTTAGCACCACCTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212335.2
3UTR CCA 72 bp	GGTGCTAACAAGACCAGTGCTGATGTCACACTGGCATaGTGGCACCCTTCAAAAGCCAAGACTTGGGGCACT	+
Preference number: 3 (lower is better) Translates to: GANKTSADVTLA*WHPSKAKTWGT Trigger: AGTGCCCCAAGTCTTGGCTTTTGAAGGGTGCCACCATGCCAGTGTGACATCAGCACTGGTCTTGTTAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212335.2
CDS-3UTR GCA 90 bp	GGCAGACTTCACTGTGACTGCAGAGGTGGTGCTAACAAGACCAGTGCTGATGTCATGCAGGAACCACAGTaGCAGATGCCGACGGCTCGT	+
Preference number: 4 (lower is better) Translates to: GRLHCDCRGGANKTSADVMQEPQ*QMPTAR Trigger: ACGAGCCGTCGGCATCTGGCACTGTGGTTCCTGCAT...GACATCAGCACTGGTCTTGTTAGCACCACCTCTGCAGTCACAGTGAAGTCTGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212335.2
CDS-3UTR GCA 90 bp	TGTATCTACACTTGTAAGGAGAACCAGGCACTCAAGGCCAGCCAGGGTCACACAATGCAGGAACCACAGTaGCAGATGCCGACGGCTCGT	+
Preference number: 4 (lower is better) Translates to: CIYTCKENQALKASQGHTMQEPQ*QMPTAR Trigger: ACGAGCCGTCGGCATCTGGCACTGTGGTTCCTGCAT...TGTGTGACCCTGGCTGGCCTTGAGTGCCTGGTTCTCCTTACAAGTGTAGATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059980.11
CDS-3UTR GCA 90 bp	ACTCAAGGCCAGCCAGGGTCACACAGTATGTCTCAAAACAAGCATCTTTCGAAAAGACTTCACTGTGACTaGAGAGGTGGTGTTGTAGGT	+
Preference number: 4 (lower is better) Translates to: TQGQPGSHSMSQNKHLSKRLHCD*RGGVVG Trigger: ACCTACAACACCACCTCTGCAGTCACAGTGAAGTCT...TTTCGAAAGATGCTTGTTTTGAGACATACTGTGTGACCCTGGCTGGCCTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059980.11

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