Pregenerated sensors for RPL34 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062006

Ensembl transcript IDs: ENSMUST00000133802.6

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	CAATCTTTTCTACCTTTGTCTGTCACCTCCTCAATCAGCCACCCAAACCAACACAGCTCACATGCCGTGTaGCAAACACCCAGCTTGCCT	+
Preference number: 2 (lower is better) Translates to: QSFLPLSVTSSISHPNQHSSHAV*QTPSLP Trigger: AGGCAAGCTGGGTGTTTGTCACACGGCATGTGAGCT...GTGTTGGTTTGGGTGGCTGATTGAGGAGGTGACAGACAAAGGTAGAAAAGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133802.6
CDS-3UTR GCA 90 bp	CCCCAGCTGCCTACGAGCGATCAAACACTAACTCAGCATCTCTTTCCTGTCTGCGGTAAACAATCCTGTTaGCAGGGGTTCGAGACAGCC	+
Preference number: 4 (lower is better) Translates to: PQLPTSDQTLTQHLFPVCGKQSC*QGFETA Trigger: GGCTGTCTCGAACCCCTGGCAACAGGATTGTTTACC...GCAGACAGGAAAGAGATGCTGAGTTAGTGTTTGATCGCTCGTAGGCAGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133802.6
3UTR CAA 72 bp	CTGCCTAAAAGCATCTGTATATCCCAGACCTTCATCTaGTCAAGCCGGACCCTCAGTTTTGCTTCGAGTCAC	+
Preference number: 4 (lower is better) Translates to: LPKSICISQTFI*SSRTLSFASSH Trigger: GTGACTCGAAGCAAAACTGAGGGTCCGGCTTGACAAGATGAAGGTCTGGGATATACAGATGCTTTTAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133802.6

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