Pregenerated sensors for RPL3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060036

Ensembl transcript IDs: ENSMUST00000187832.7

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TGCCGGCTTCTAAGGAGCCTTTTCCACCGGCAAGCGGAGCCTGGATaGAGCTCATCGGGCAGAGCCGAGCGGAGCAGTTCTTATAGAAGC	+
Preference number: 5 (lower is better) Translates to: CRLLRSLFHRQAEPG*SSSGRAERSSSYRS Trigger: GCTTCTATAAGAACTGCTCCGCTCGGCTCTGCCCGATGAGCTTCATCCAGGCTCCGCTTGCCGGTGGAAAAGGCTCCTTAGAAGCCGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187832.7
CDS CCA 90 bp	CCCTTGCAACAGGTGAGAGGAAGGCAGACTGGCACCATTTGGGGATaGGGCTCATTGCCGGCTTCTAAGGAGCCTTTTCCACCGGCAAGC	+
Preference number: 5 (lower is better) Translates to: PLQQVRGRQTGTIWG*GSLPASKEPFPPAS Trigger: GCTTGCCGGTGGAAAAGGCTCCTTAGAAGCCGGCAATGAGCCCCATCCCCAAATGGTGCCAGTCTGCCTTCCTCTCACCTGTTGCAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187832.7
CDS CCA 90 bp	TCATCACCCTTGCAACAGGTGAGAGGAAGGCAGACTGGCACCATTTaGGGATGGGGCTCATTGCCGGCTTCTAAGGAGCCTTTTCCACCG	+
Preference number: 5 (lower is better) Translates to: SSPLQQVRGRQTGTI*GWGSLPASKEPFPP Trigger: CGGTGGAAAAGGCTCCTTAGAAGCCGGCAATGAGCCCCATCCCCAAATGGTGCCAGTCTGCCTTCCTCTCACCTGTTGCAAGGGTGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187832.7
CDS CCA 72 bp	GCTTCTAAGGAGCCTTTTCCACCGGCAAGCGGAGCCTaGATGAAGCTCATCGGGCAGAGCCGAGCGGAGCAG	+
Preference number: 6 (lower is better) Translates to: ASKEPFPPASGA*MKLIGQSRAEQ Trigger: CTGCTCCGCTCGGCTCTGCCCGATGAGCTTCATCCAGGCTCCGCTTGCCGGTGGAAAAGGCTCCTTAGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187832.7
CDS TCA 72 bp	CTAAGGAGCCTTTTCCACCGGCAAGCGGAGCCTGGATaGAGCTCATCGGGCAGAGCCGAGCGGAGCAGTTCT	+
Preference number: 6 (lower is better) Translates to: LRSLFHRQAEPG*SSSGRAERSSS Trigger: AGAACTGCTCCGCTCGGCTCTGCCCGATGAGCTTCATCCAGGCTCCGCTTGCCGGTGGAAAAGGCTCCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187832.7
CDS CCA 72 bp	TTCATCACCCTTGCAACAGGTGAGAGGAAGGCAGACTaGCACCATTTGGGGATGGGGCTCATTGCCGGCTTC	+
Preference number: 6 (lower is better) Translates to: FITLATGERKAD*HHLGMGLIAGF Trigger: GAAGCCGGCAATGAGCCCCATCCCCAAATGGTGCCAGTCTGCCTTCCTCTCACCTGTTGCAAGGGTGATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187832.7

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