Pregenerated sensors for RPL19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017404Ensembl transcript IDs: ENSMUST00000017548.7, ENSMUST00000092425.11
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGACTGATCCACATGAGGCCACAGCCAGGCCGCTATGTACAGACACGAGGGAAGCTATGCCCATATGCCTaGCCTTCCGTCGGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLIHMRPQPGRYVQTRGKLCPYA*PSVGPG Trigger: CCCTGGCCCGACGGAAGGGCAGGCATATGGGCATAG...CTTCCCTCGTGTCTGTACATAGCGGCCTGGCTGTGGCCTCATGTGGATCAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017548.7 ENSMUST00000092425.11 |
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| CDS-3UTR GCA 90 bp | TGTTTTATTTTAAAGACTGATCCACATGAGGCCACAGCCAGGCCGCTATGTACACTATGCCCATATGCCTaGCCTTCCGTCGGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFILKTDPHEATARPLCTLCPYA*PSVGPG Trigger: CCCTGGCCCGACGGAAGGGCAGGCATATGGGCATAG...TGTACATAGCGGCCTGGCTGTGGCCTCATGTGGATCAGTCTTTAAAATAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017548.7 ENSMUST00000092425.11 |
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