Pregenerated sensors for RPL17 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062328

Ensembl transcript IDs: ENSMUST00000079716.6, ENSMUST00000237431.2

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 72 bp	GTGGTTTTGAACCATCTATTTCACTGTTTAATAACATaGTTCTCCATGTTAAAGCACCTCACTCCCAACAGG	+
Preference number: 3 (lower is better) Translates to: VVLNHLFHCLIT*FSMLKHLTPNR Trigger: CCTGTTGGGAGTGAGGTGCTTTAACATGGAGAAGCATGTTATTAAACAGTGAAATAGATGGTTCAAAACCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079716.6 ENSMUST00000237431.2
CDS-3UTR CAA 90 bp	AATAACATGCTTCTCCATGTTAAAGCACCTCACTCCCAACAGGGCTCATTAAAGACATCCTTCAGATACTaGGTGGCTTTGCGGATATGC	+
Preference number: 5 (lower is better) Translates to: NNMLLHVKAPHSQQGSLKTSFRY*VALRIC Trigger: GCATATCCGCAAAGCCACCAAGTATCTGAAGGATGT...CTTTAATGAGCCCTGTTGGGAGTGAGGTGCTTTAACATGGAGAAGCATGTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079716.6 ENSMUST00000237431.2

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