Pregenerated sensors for RPL14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025794Ensembl transcript IDs: ENSMUST00000165532.3, ENSMUST00000216990.2
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GCCTGCAGCCTTCTTGCCTGGTCCTGTGGCCTTCTTGGCTGGGACTTTAGCTTTAGCAGCAGCAGCAGCTaGAGCCGCCGCAATGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ACSLLAWSCGLLGWDFSFSSSSS*SRRNGS Trigger: GCTGCCATTGCGGCGGCTGCAGCTGCTGCTGCTGCT...AAAGCTAAAGTCCCAGCCAAGAAGGCCACAGGACCAGGCAAGAAGGCTGCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216990.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGCCTTCTTGCCTGGTCCTGTGGCCTTCTTGGCTGGGACTTTAGCTTTAGCAGGATAGCAGCTCTTTaGAGTTTCTTTACTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: CSLLAWSCGLLGWDFSFSRIAAL*SFFTSV Trigger: GACTGAAGTAAAGAAACTTCAAAGAGCTGCTATCCT...GCTAAAGCTAAAGTCCCAGCCAAGAAGGCCACAGGACCAGGCAAGAAGGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216990.2 |
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| 3UTR CAA 90 bp | TCCACCCGTTGGTGGGAAATTTATTTGTTAGGGTTAACGACACTGTaGTACTGTCATGGTACCCCCTGTATAAAGGATCAGTTTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: STRWWEIYLLGLTTL*YCHGTPCIKDQFDS Trigger: AGAGTCAAACTGATCCTTTATACAGGGGGTACCATGACAGTACAACAGTGTCGTTAACCCTAACAAATAAATTTCCCACCAACGGGTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| 3UTR GCA 72 bp | CTTGGCTGGGACTTTAGCTTTAGCAGCAGCAGCAGCTaGAGCCGCCGCAATGGCAGCTTTGGCCACAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LGWDFSFSSSSS*SRRNGSFGHSC Trigger: GCAGCTGTGGCCAAAGCTGCCATTGCGGCGGCTGCAGCTGCTGCTGCTGCTAAAGCTAAAGTCCCAGCCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216990.2 |
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| 3UTR-3UTR CAA 90 bp | TGCAGCCTTCTTGCCTGGTCCTGTGGCCTTCTTGGCTGGGACTTTAGCTTTAGCCAGGATAGCAGCTCTTaGAAGTTTCTTTACTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: CSLLAWSCGLLGWDFSFSQDSSS*KFLYFS Trigger: ACTGAAGTAAAGAAACTTCAAAGAGCTGCTATCCTG...GCTAAAGCTAAAGTCCCAGCCAAGAAGGCCACAGGACCAGGCAAGAAGGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216990.2 |
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| 3UTR CAA 72 bp | TGGCCTGCAGCCTTCTTGCCTGGTCCTGTGGCCTTCTaGGCTGGGACTTTAGCTTTAGCAGCAGCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: WPAAFLPGPVAF*AGTLALAAAAA Trigger: AGCTGCTGCTGCTGCTAAAGCTAAAGTCCCAGCCAAGAAGGCCACAGGACCAGGCAAGAAGGCTGCAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216990.2 |
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| CDS-3UTR TCA 90 bp | CCATCCTATCTACAATCCCACCAGTCTATTTCCCACTTGGCGACAAGCTTAGAGTGGCCTGCAGCCTTCTaGGCAGGAGCCTTCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PSYLQSHQSISHLATSLEWPAAF*AGAFWP Trigger: AGGCCAGAAGGCTCCTGCTCAGAAGGCTGCAGGCCA...CTCTAAGCTTGTCGCCAAGTGGGAAATAGACTGGTGGGATTGTAGATAGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR TCA 90 bp | CCTGGTCCTGTGGCCTTCTTGGCTGGGACTTTAGCTTTAGCAGCAGCAGCAGCTGGCGGGCACCTGTTCTaGTCAATGACATCTACAATT | + |
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Preference number: 4 (lower is better) Translates to: PGPVAFLAGTLALAAAAAGGHLF*SMTSTI Trigger: AATTGTAGATGTCATTGATCAGAACAGGTGCCCGCC...AGCTGCTGCTGCTGCTAAAGCTAAAGTCCCAGCCAAGAAGGCCACAGGACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216990.2 |
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| CDS-3UTR GCA 90 bp | GCCTGCAGCCTTCTTGCCTGGTCCTGTGGCCTTCTTGGCTGGGACTTTAGCTTTGGCCCATCTTGTGGCTaGCCATTTCGTATTGATATC | + |
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Preference number: 4 (lower is better) Translates to: ACSLLAWSCGLLGWDFSFGPSCG*PFRIDI Trigger: GATATCAATACGAAATGGGCAGCCACAAGATGGGCC...AAAGCTAAAGTCCCAGCCAAGAAGGCCACAGGACCAGGCAAGAAGGCTGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216990.2 |
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| CDS-3UTR GCA 90 bp | GGTACCCCCTGTATAAAGGATCAGTTTGACTCTGGCTGTATGCTAAGTACTAAGAGCAGCAGCAGCAGCTaGAGCCGCCGCAATGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GTPCIKDQFDSGCMLSTKSSSSS*SRRNGS Trigger: GCTGCCATTGCGGCGGCTGCAGCTGCTGCTGCTGCT...CTTAGTACTTAGCATACAGCCAGAGTCAAACTGATCCTTTATACAGGGGGTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR CCA 90 bp | CCCTGTATAAAGGATCAGTTTGACTCTGGCTGTATGCTAAGTACTAAGGCCTGGCTGCAGCCGCCGCAATaGCAGCTTTGGCCACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PCIKDQFDSGCMLSTKAWLQPPQ*QLWPQL Trigger: CAGCTGTGGCCAAAGCTGCCATTGCGGCGGCTGCAG...CCAGGCCTTAGTACTTAGCATACAGCCAGAGTCAAACTGATCCTTTATACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR GCA 90 bp | GGTACCCCCTGTATAAAGGATCAGTTTGACTCTGGCTGTATGCTAAGTACTAAGGGCCTGCAGCCTTCTTaGCTGGTCCTGTGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GTPCIKDQFDSGCMLSTKGLQPS*LVLWPS Trigger: AGAAGGCCACAGGACCAGGCAAGAAGGCTGCAGGCC...CTTAGTACTTAGCATACAGCCAGAGTCAAACTGATCCTTTATACAGGGGGTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR GCA 90 bp | CTGTTGTACTGTCATGGTACCCCCTGTATAAAGGATCAGTTTGACTCTGGCTGTACCTTTAGCAGGAGGTaGTGCCTTCTGGCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLYCHGTPCIKDQFDSGCTFSRR*CLLACS Trigger: GCTGCAGGCCAGAAGGCAGCACCTCCTGCTAAAGGT...ACAGCCAGAGTCAAACTGATCCTTTATACAGGGGGTACCATGACAGTACAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR GCA 90 bp | TCCACCCGTTGGTGGGAAATTTATTTGTTAGGGTTAACGACACTGTTGTACTGTTTGAAGGGCATGGCCTaGCTCCTCACCCGAGTACAG | + |
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Preference number: 4 (lower is better) Translates to: STRWWEIYLLGLTTLLYCLKGMA*LLTRVQ Trigger: CTGTACTCGGGTGAGGAGGCAGGCCATGCCCTTCAA...ACAGTACAACAGTGTCGTTAACCCTAACAAATAAATTTCCCACCAACGGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR CCA 90 bp | TCCACCCGTTGGTGGGAAATTTATTTGTTAGGGTTAACGACACTGTTGTACTGTTCTTGCCTGGTCCTGTaGCCTTCTTGGCTGGGACTT | + |
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Preference number: 4 (lower is better) Translates to: STRWWEIYLLGLTTLLYCSCLVL*PSWLGL Trigger: AAGTCCCAGCCAAGAAGGCCACAGGACCAGGCAAGA...ACAGTACAACAGTGTCGTTAACCCTAACAAATAAATTTCCCACCAACGGGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR CCA 90 bp | ACCCGTTGGTGGGAAATTTATTTGTTAGGGTTAACGACACTGTTGTACTGTCATTGCAGCCTTCTTGCCTaGTCCTGTGGCCTTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TRWWEIYLLGLTTLLYCHCSLLA*SCGLLG Trigger: GCCAAGAAGGCCACAGGACCAGGCAAGAAGGCTGCA...ATGACAGTACAACAGTGTCGTTAACCCTAACAAATAAATTTCCCACCAACGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR GCA 90 bp | CCCTGTATAAAGGATCAGTTTGACTCTGGCTGTATGCTAAGTACTAAGGCCTGGGGCCCATCTTGTGGCTaGCCATTTCGTATTGATATC | + |
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Preference number: 4 (lower is better) Translates to: PCIKDQFDSGCMLSTKAWGPSCG*PFRIDI Trigger: GATATCAATACGAAATGGGCAGCCACAAGATGGGCC...CCAGGCCTTAGTACTTAGCATACAGCCAGAGTCAAACTGATCCTTTATACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| 3UTR CAA 72 bp | CCATCCTATCTACAATCCCACCAGTCTATTTCCCACTaGGCGACAAGCTTAGAGTCCACACATGAGATTTAC | + |
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Preference number: 4 (lower is better) Translates to: PSYLQSHQSISH*ATSLESTHEIY Trigger: GTAAATCTCATGTGTGGACTCTAAGCTTGTCGCCAAGTGGGAAATAGACTGGTGGGATTGTAGATAGGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR CCA 90 bp | ACCCGTTGGTGGGAAATTTATTTGTTAGGGTTAACGACACTGTTGTACTGTCATTGTGGCCTTCTTGGCTaGGACTTTAGCTTTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TRWWEIYLLGLTTLLYCHCGLLG*DFSFSS Trigger: GCTGCTAAAGCTAAAGTCCCAGCCAAGAAGGCCACA...ATGACAGTACAACAGTGTCGTTAACCCTAACAAATAAATTTCCCACCAACGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| 3UTR CAA 72 bp | TGGTGGGAAATTTATTTGTTAGGGTTAACGACACTGTaGTACTGTCATGGTACCCCCTGTATAAAGGATCAG | + |
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Preference number: 4 (lower is better) Translates to: WWEIYLLGLTTL*YCHGTPCIKDQ Trigger: CTGATCCTTTATACAGGGGGTACCATGACAGTACAACAGTGTCGTTAACCCTAACAAATAAATTTCCCACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR TCA 90 bp | ATGAAGGAATTCCACCCGTTGGTGGGAAATTTATTTGTTAGGGTTAACGACACTAGGATAGCAGCTCTTTaGAGTTTCTTTACTTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: MKEFHPLVGNLFVRVNDTRIAAL*SFFTSV Trigger: GACTGAAGTAAAGAAACTTCAAAGAGCTGCTATCCT...AGTGTCGTTAACCCTAACAAATAAATTTCCCACCAACGGGTGGAATTCCTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR CAA 90 bp | CCCTGTATAAAGGATCAGTTTGACTCTGGCTGTATGCTAAGTACTAAGGCCTGGTGGCCTGCAGCCTTCTaGCCTGGTCCTGTGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PCIKDQFDSGCMLSTKAWWPAAF*PGPVAF Trigger: GAAGGCCACAGGACCAGGCAAGAAGGCTGCAGGCCA...CCAGGCCTTAGTACTTAGCATACAGCCAGAGTCAAACTGATCCTTTATACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR CAA 90 bp | CCATCCTATCTACAATCCCACCAGTCTATTTCCCACTTGGCGACAAGCTTAGAGGGTCCTGTGGCCTTCTaGGCTGGGACTTTAGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: PSYLQSHQSISHLATSLEGPVAF*AGTLAL Trigger: TAAAGCTAAAGTCCCAGCCAAGAAGGCCACAGGACC...CTCTAAGCTTGTCGCCAAGTGGGAAATAGACTGGTGGGATTGTAGATAGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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| CDS-3UTR CAA 90 bp | CACCCGTTGGTGGGAAATTTATTTGTTAGGGTTAACGACACTGTTGTACTGTCACAGGATAGCAGCTCTTaGAAGTTTCTTTACTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: HPLVGNLFVRVNDTVVLSQDSSS*KFLYFS Trigger: ACTGAAGTAAAGAAACTTCAAAGAGCTGCTATCCTG...TGACAGTACAACAGTGTCGTTAACCCTAACAAATAAATTTCCCACCAACGGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165532.3 |
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