Pregenerated sensors for RPL10L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060499Ensembl transcript IDs: ENSMUST00000081908.8
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTAATTCTCTATAAAGAACTTCTCACACGTCTTCCAACTTCTCTAGCCACTCTTCCTCGCATGCCGGTCTaGAGCCTGTCGGCACCTGCG | + |
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Preference number: 4 (lower is better) Translates to: LILYKELLTRLPTSLATLPRMPV*SLSAPA Trigger: CGCAGGTGCCGACAGGCTCCAGACCGGCATGCGAGG...AAGAGTGGCTAGAGAAGTTGGAAGACGTGTGAGAAGTTCTTTATAGAGAATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081908.8 |
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| CDS-3UTR GCA 90 bp | GTACCATTTATACCGTCACCACAAAACATTTGCTACACTGCAGTATACACCAAAACTTGTTGGCGCAGATaGGTGCGGCCTCCAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPFIPSPQNICYTAVYTKTCWRR*VRPPGL Trigger: AAGCCCTGGAGGCCGCACGCATCTGCGCCAACAAGT...TTTGGTGTATACTGCAGTGTAGCAAATGTTTTGTGGTGACGGTATAAATGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081908.8 |
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| CDS-3UTR CAA 90 bp | AGTACCATTTATACCGTCACCACAAAACATTTGCTACACTGCAGTATACACCAATTCACCATGTACTTGTaGGCGCAGATGCGTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: STIYTVTTKHLLHCSIHQFTMYL*AQMRAA Trigger: GGCCGCACGCATCTGCGCCAACAAGTACATGGTGAA...TTGGTGTATACTGCAGTGTAGCAAATGTTTTGTGGTGACGGTATAAATGGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081908.8 |
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| CDS-3UTR CAA 90 bp | ATTCTCTATAAAGAACTTCTCACACGTCTTCCAACTTCTCTAGCCACTCTTAATTGCAGGGCTCGCCACTaGTCCAGAGGACCTCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILYKELLTRLPTSLATLNCRARH*SRGPRS Trigger: TGAACGAGGTCCTCTGGACAAGTGGCGAGCCCTGCA...ATTAAGAGTGGCTAGAGAAGTTGGAAGACGTGTGAGAAGTTCTTTATAGAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081908.8 |
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| CDS-3UTR CAA 90 bp | TCTTGTTTCTTAAGGCAGGTACTTTCCATTGTAATGGTCTATACTATGCAAAGTTCAGGGATGAGGCGCTaGGCCGCCACCTTGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SCFLRQVLSIVMVYTMQSSGMRR*AATLSS Trigger: TGAAGACAAGGTGGCGGCCAAGCGCCTCATCCCTGA...ACTTTGCATAGTATAGACCATTACAATGGAAAGTACCTGCCTTAAGAAACAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081908.8 |
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