Pregenerated sensors for RPH3AL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020847Ensembl transcript IDs: ENSMUST00000021208.11, ENSMUST00000066504.11, ENSMUST00000108420.9, ENSMUST00000121287.8, ENSMUST00000152035.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAAGCCCTCCAAGGACGAAGGGACTGGTCAGGAGGGATGGAACTaGCCTCAGGGAAGGAAGGGCATTGGACACCTCCCCACCCCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: RKPSKDEGTGQEGWN*PQGRKGIGHLPTPG Trigger: CCCTGGGGTGGGGAGGTGTCCAATGCCCTTCCTTCCCTGAGGCCAGTTCCATCCCTCCTGACCAGTCCCTTCGTCCTTGGAGGGCTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CCA 90 bp | TTGGAGAGAAAGCCCTCCAAGGACGAAGGGACTGGTCAGGAGGGATaGAACTGGCCTCAGGGAAGGAAGGGCATTGGACACCTCCCCACC | + |
|
Preference number: 1 (lower is better) Translates to: LERKPSKDEGTGQEG*NWPQGRKGIGHLPT Trigger: GGTGGGGAGGTGTCCAATGCCCTTCCTTCCCTGAGGCCAGTTCCATCCCTCCTGACCAGTCCCTTCGTCCTTGGAGGGCTTTCTCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CCA 90 bp | AGCTTGGGAAGCCTCAAGAACCTTCAGAGGGGCGCTCTGCGAGGCTaGCCCCGTTGTCCCTCTCTGAATCTTCCTCTGGAAGAGTTTGCC | + |
|
Preference number: 1 (lower is better) Translates to: SLGSLKNLQRGALRG*PRCPSLNLPLEEFA Trigger: GGCAAACTCTTCCAGAGGAAGATTCAGAGAGGGACAACGGGGCCAGCCTCGCAGAGCGCCCCTCTGAAGGTTCTTGAGGCTTCCCAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR GCA 90 bp | CTGGTCCAATCCTCTGATCCTAACAACAGGAGCCAAGTCAATTCCTaGCAAACAGCCTTGGTGACAGGCGAGCTGCCTGAGCGGGCCCCT | + |
|
Preference number: 1 (lower is better) Translates to: LVQSSDPNNRSQVNS*QTALVTGELPERAP Trigger: AGGGGCCCGCTCAGGCAGCTCGCCTGTCACCAAGGCTGTTTGGCAGGAATTGACTTGGCTCCTGTTGTTAGGATCAGAGGATTGGACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR GCA 90 bp | GTGGGCTCTAGGCAGCAGGGCTCGTGTGCCTTAATGGAGATGTTCTaGTTGCCAACCCCAGGCGAGGTGGATGTTCCAAGATACAGCTTG | + |
|
Preference number: 1 (lower is better) Translates to: VGSRQQGSCALMEMF*LPTPGEVDVPRYSL Trigger: CAAGCTGTATCTTGGAACATCCACCTCGCCTGGGGTTGGCAAGCAGAACATCTCCATTAAGGCACACGAGCCCTGCTGCCTAGAGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR GCA 90 bp | CCTCACAAAGTCATGCTGAACTACTGTGGGATGCAGCTATGCCACTaGTGGGCATTTACTCCCAGGGGATTGGAAGCGGGATCTCAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: PHKVMLNYCGMQLCH*WAFTPRGLEAGSQR Trigger: TCTCTGAGATCCCGCTTCCAATCCCCTGGGAGTAAATGCCCAGCAGTGGCATAGCTGCATCCCACAGTAGTTCAGCATGACTTTGTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CCA 90 bp | TCTGCTTGCCAACCCCAGGCGAGGTGGATGTTCCAAGATACAGCTTaGTGTCTGGTCCAATCCTCTGATCCTAACAACAGGAGCCAAGTC | + |
|
Preference number: 1 (lower is better) Translates to: SACQPQARWMFQDTA*CLVQSSDPNNRSQV Trigger: GACTTGGCTCCTGTTGTTAGGATCAGAGGATTGGACCAGACACCAAGCTGTATCTTGGAACATCCACCTCGCCTGGGGTTGGCAAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CCA 90 bp | CACAAAGTCATGCTGAACTACTGTGGGATGCAGCTATGCCACTGCTaGGCATTTACTCCCAGGGGATTGGAAGCGGGATCTCAGAGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: HKVMLNYCGMQLCHC*AFTPRGLEAGSQRD Trigger: ATCTCTCTGAGATCCCGCTTCCAATCCCCTGGGAGTAAATGCCCAGCAGTGGCATAGCTGCATCCCACAGTAGTTCAGCATGACTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CCA 90 bp | GCCAACCCCAGGCGAGGTGGATGTTCCAAGATACAGCTTGGTGTCTaGTCCAATCCTCTGATCCTAACAACAGGAGCCAAGTCAATTCCT | + |
|
Preference number: 1 (lower is better) Translates to: ANPRRGGCSKIQLGV*SNPLILTTGAKSIP Trigger: AGGAATTGACTTGGCTCCTGTTGTTAGGATCAGAGGATTGGACCAGACACCAAGCTGTATCTTGGAACATCCACCTCGCCTGGGGTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CCA 90 bp | CCACCGCTTTCCCAACACAGGTCGGAGCGTGGGGATTGTGGTCTTTaGAAGAGAGAGAGACTCCGTGTGAAAATTCTCGTGTTTATAATG | + |
|
Preference number: 1 (lower is better) Translates to: PPLSQHRSERGDCGL*KRERLRVKILVFIM Trigger: CATTATAAACACGAGAATTTTCACACGGAGTCTCTCTCTCTTCCAAAGACCACAATCCCCACGCTCCGACCTGTGTTGGGAAAGCGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR TCA 90 bp | TTACAAGAGCTAAATTGTGGGAGCGCTCGGGGTGTCCATCACAGATaGGTGGACCAGCAGAAGTATGGTCAAAGAGTCACCTTGAAATGT | + |
|
Preference number: 1 (lower is better) Translates to: LQELNCGSARGVHHR*VDQQKYGQRVTLKC Trigger: ACATTTCAAGGTGACTCTTTGACCATACTTCTGCTGGTCCACTCATCTGTGATGGACACCCCGAGCGCTCCCACAATTTAGCTCTTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CCA 90 bp | CTGGCTGGTTTCTCTTGCTCAGGCTTTAGAAAGGTTTCAGTGAATTaGCGCTACCTATTTCAATCCATCCACCGCTTTCCCAACACAGGT | + |
|
Preference number: 1 (lower is better) Translates to: LAGFSCSGFRKVSVN*RYLFQSIHRFPNTG Trigger: ACCTGTGTTGGGAAAGCGGTGGATGGATTGAAATAGGTAGCGCCAATTCACTGAAACCTTTCTAAAGCCTGAGCAAGAGAAACCAGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR TCA 90 bp | ATCACAGATGAGTGGACCAGCAGAAGTATGGTCAAAGAGTCACCTTaGAATGTTAGTCCCTTCATAAAGGAGAGGATGGCACTTGAAGAC | + |
|
Preference number: 1 (lower is better) Translates to: ITDEWTSRSMVKESP*NVSPFIKERMALED Trigger: GTCTTCAAGTGCCATCCTCTCCTTTATGAAGGGACTAACATTTCAAGGTGACTCTTTGACCATACTTCTGCTGGTCCACTCATCTGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR-3UTR GCA 90 bp | GCTTGGAGAGAAAGCCCTCCAAGGACGAAGGGACTGGTCAGGAGGGATGGAACTTTCAGAGGGGCGCTCTaGGAGGCTGGCCCCGTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: AWRESPPRTKGLVRRDGTFRGAL*EAGPVV Trigger: GACAACGGGGCCAGCCTCGCAGAGCGCCCCTCTGAA...AGTTCCATCCCTCCTGACCAGTCCCTTCGTCCTTGGAGGGCTTTCTCTCCAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CAA 90 bp | AAGCCTCAAGAACCTTCAGAGGGGCGCTCTGCGAGGCTGGCCCCGTaGTCCCTCTCTGAATCTTCCTCTGGAAGAGTTTGCCTCAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: KPQEPSEGRSARLAP*SLSESSSGRVCLSL Trigger: CAGGCTGAGGCAAACTCTTCCAGAGGAAGATTCAGAGAGGGACAACGGGGCCAGCCTCGCAGAGCGCCCCTCTGAAGGTTCTTGAGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTCTGCTTGCCAACCCCAGGCGAGGTGGATGTTCCAAGATACAGCTTGGTGGCAGGAGGTGGTCTCTaGGGACTAGCTGGGGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: MFCLPTPGEVDVPRYSLVAGGGL*GLAGEH Trigger: GTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGC...CACCAAGCTGTATCTTGGAACATCCACCTCGCCTGGGGTTGGCAAGCAGAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CAA 90 bp | GGCTCTAGGCAGCAGGGCTCGTGTGCCTTAATGGAGATGTTCTGCTaGCCAACCCCAGGCGAGGTGGATGTTCCAAGATACAGCTTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GSRQQGSCALMEMFC*PTPGEVDVPRYSLV Trigger: CACCAAGCTGTATCTTGGAACATCCACCTCGCCTGGGGTTGGCAAGCAGAACATCTCCATTAAGGCACACGAGCCCTGCTGCCTAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CAA 90 bp | CGTCTGTGCCTCTGGTCCTCCGTCTGTACTTTGCGTAGCTGGCACTaGAGTTCTTTGACTCCTCTGGTGTCTCCATCTGCAGGAGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RLCLWSSVCTLRSWH*SSLTPLVSPSAGGG Trigger: ACCACCTCCTGCAGATGGAGACACCAGAGGAGTCAAAGAACTCAAGTGCCAGCTACGCAAAGTACAGACGGAGGACCAGAGGCACAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR-3UTR CCA 90 bp | AGTCATGCTGAACTACTGTGGGATGCAGCTATGCCACTGCTGGGCATTTACTCCGGACGTCTGTGCCTCTaGTCCTCCGTCTGTACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SHAELLWDAAMPLLGIYSGRLCL*SSVCTL Trigger: CAAAGTACAGACGGAGGACCAGAGGCACAGACGTCC...GGAGTAAATGCCCAGCAGTGGCATAGCTGCATCCCACAGTAGTTCAGCATGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CAA 90 bp | TGTGGGATGCAGCTATGCCACTGCTGGGCATTTACTCCCAGGGGATaGGAAGCGGGATCTCAGAGAGATCAGCACAACCACACATATAGT | + |
|
Preference number: 2 (lower is better) Translates to: CGMQLCHCWAFTPRG*EAGSQRDQHNHTYS Trigger: ACTATATGTGTGGTTGTGCTGATCTCTCTGAGATCCCGCTTCCAATCCCCTGGGAGTAAATGCCCAGCAGTGGCATAGCTGCATCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR-3UTR TCA 90 bp | GTTGGGAGGTGCACTGAGACACTGATCTGGCTGGTTTCTCTTGCTCAGGCTTTACCCGTTGTCCCTCTCTaGATCTTCCTCTGGAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: VGRCTETLIWLVSLAQALPVVPL*IFLWKS Trigger: ACTCTTCCAGAGGAAGATTCAGAGAGGGACAACGGG...TAAAGCCTGAGCAAGAGAAACCAGCCAGATCAGTGTCTCAGTGCACCTCCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCACGCTAATGAATCTGATGAAATGCAGACTCTGGCTCAGGAGGTTCCAGGGTCTGGTGTCTCCATCTaGAGGAGGTGGTCTCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: HHANESDEMQTLAQEVPGSGVSI*RRWSLR Trigger: CCTCAGAGACCACCTCCTGCAGATGGAGACACCAGA...CCCTGGAACCTCCTGAGCCAGAGTCTGCATTTCATCAGATTCATTAGCGTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR-3UTR CCA 90 bp | GTGCATATAGGAAGGCCTTCTCAGCCCAACCCAAGACCCAAGCAAATAGAGATGGAGTTTGCCTCAGCCTaGAGATGTCAGCTGGCCACT | + |
|
Preference number: 2 (lower is better) Translates to: VHIGRPSQPNPRPKQIEMEFASA*RCQLAT Trigger: AGTGGCCAGCTGACATCTCCAGGCTGAGGCAAACTC...CATCTCTATTTGCTTGGGTCTTGGGTTGGGCTGAGAAGGCCTTCCTATATGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGCTTGCCAACCCCAGGCGAGGTGGATGTTCCAAGATACAGCTTGGTGTCTGGACCAGCAGAAGTATaGTCAAAGAGTCACCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: FCLPTPGEVDVPRYSLVSGPAEV*SKSHLE Trigger: TTCAAGGTGACTCTTTGACCATACTTCTGCTGGTCC...AGACACCAAGCTGTATCTTGGAACATCCACCTCGCCTGGGGTTGGCAAGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGTATAGATGGACTTGATTTAGTGTTAGGGTTGGGAGGTGCACTGAGACACCAAGGACGAAGGGACTaGTCAGGAGGGATGGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: FCIDGLDLVLGLGGALRHQGRRD*SGGMEL Trigger: CAGTTCCATCCCTCCTGACCAGTCCCTTCGTCCTTG...GTGTCTCAGTGCACCTCCCAACCCTAACACTAAATCAAGTCCATCTATACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGTTCCAAGATACAGCTTGGTGTCTGGTCCAATCCTCTGATCCTAACAACAGGATTATTCAGCCCCTGTaGAGAACAGTATGGCGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: MFQDTAWCLVQSSDPNNRIIQPL*RTVWRL Trigger: GAGCCGCCATACTGTTCTGCACAGGGGCTGAATAAT...CCTGTTGTTAGGATCAGAGGATTGGACCAGACACCAAGCTGTATCTTGGAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR-3UTR CCA 90 bp | GCTTGGAAAGGGAGGTCAGGATGGGAGCCATTAAGGACTTCCGGCATATTCCAATGTACTTTGCGTAGCTaGCACTTGAGTTCTTTGACT | + |
|
Preference number: 2 (lower is better) Translates to: AWKGRSGWEPLRTSGIFQCTLRS*HLSSLT Trigger: AGTCAAAGAACTCAAGTGCCAGCTACGCAAAGTACA...TTGGAATATGCCGGAAGTCCTTAATGGCTCCCATCCTGACCTCCCTTTCCAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR-3UTR TCA 90 bp | CTGAAGAACAAAAAGCGCTTTAATGTCTTAGAGGAAGCTGTGTTTCAGGGTGGAATAGTCGATAAGGCATaGCAGGGTGGGGGCAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: LKNKKRFNVLEEAVFQGGIVDKA*QGGGKH Trigger: ATGCTTGCCCCCACCCTGTCATGCCTTATCGACTAT...TCCACCCTGAAACACAGCTTCCTCTAAGACATTAAAGCGCTTTTTGTTCTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCAGGGTGGGAGCCTTGTTTTCCACTGAAGAACAAAAAGCGCTTTAATGTCAAGCAAATAGAGATGTaGCTGGGATGGGAGAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: EAGWEPCFPLKNKKRFNVKQIEM*LGWEKN Trigger: GTTCTTCTCCCATCCCAGTCACATCTCTATTTGCTT...GACATTAAAGCGCTTTTTGTTCTTCAGTGGAAAACAAGGCTCCCACCCTGCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR TCA 72 bp | GGGGCGCTCTGCGAGGCTGGCCCCGTTGTCCCTCTCTaGATCTTCCTCTGGAAGAGTTTGCCTCAGCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GALCEAGPVVPL*IFLWKSLPQPG Trigger: TCCAGGCTGAGGCAAACTCTTCCAGAGGAAGATTCAGAGAGGGACAACGGGGCCAGCCTCGCAGAGCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGGCTGGTTTCTCTTGCTCAGGCTTTAGAAAGGTTTCAGTGAATTGGCGCGGGGGCGGGGGTGGGTaGCTCAGCTCTACAGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: DLAGFSCSGFRKVSVNWRGGGGG*LSSTGS Trigger: TGACCCTGTAGAGCTGAGCAACCCACCCCCGCCCCC...GCGCCAATTCACTGAAACCTTTCTAAAGCCTGAGCAAGAGAAACCAGCCAGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR GCA 72 bp | GAATCTGCTCTTCCAGCCAGCACTGAAGGACGTCTGTaGCTCTGGTCCTCCGTCTGTACTTTGCGTAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ESALPASTEGRL*LWSSVCTLRSW Trigger: CCAGCTACGCAAAGTACAGACGGAGGACCAGAGGCACAGACGTCCTTCAGTGCTGGCTGGAAGAGCAGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR GCA 72 bp | AGGCAGCAGGGCTCGTGTGCCTTAATGGAGATGTTCTaGTTGCCAACCCCAGGCGAGGTGGATGTTCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RQQGSCALMEMF*LPTPGEVDVPR Trigger: TCTTGGAACATCCACCTCGCCTGGGGTTGGCAAGCAGAACATCTCCATTAAGGCACACGAGCCCTGCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CCA 72 bp | TCCTGGACAAGCCTCGGGGCAAATAGGACCCTGTTCTaGCCTCCAACAGTTGAAGGAAGAGGGAAAGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SWTSLGANRTLF*PPTVEGRGKGV Trigger: CACCCCTTTCCCTCTTCCTTCAACTGTTGGAGGCCAGAACAGGGTCCTATTTGCCCCGAGGCTTGTCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR GCA 72 bp | GCACTTGAGTTCTTTGACTCCTCTGGTGTCTCCATCTaGAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ALEFFDSSGVSI*RRWSLRTSWGA Trigger: TGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGACACCAGAGGAGTCAAAGAACTCAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR GCA 72 bp | GTCATGCTGAACTACTGTGGGATGCAGCTATGCCACTaGTGGGCATTTACTCCCAGGGGATTGGAAGCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VMLNYCGMQLCH*WAFTPRGLEAG Trigger: TCCCGCTTCCAATCCCCTGGGAGTAAATGCCCAGCAGTGGCATAGCTGCATCCCACAGTAGTTCAGCATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR TCA 72 bp | TGCAGAACAGTATGGCGGCTCCTCACAAAGTCATGCTaGACTACTGTGGGATGCAGCTATGCCACTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CRTVWRLLTKSC*TTVGCSYATAG Trigger: CCCAGCAGTGGCATAGCTGCATCCCACAGTAGTTCAGCATGACTTTGTGAGGAGCCGCCATACTGTTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR TCA 72 bp | GGGGCAAGCATGCTCAGTCCCCAAACACTGGCTTGTTaGGTAGCACGTCAAGGTATCAAGGAGCTTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GASMLSPQTLAC*VARQGIKELGK Trigger: CTTCCCAAGCTCCTTGATACCTTGACGTGCTACTCAACAAGCCAGTGTTTGGGGACTGAGCATGCTTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CCA 72 bp | AGCTATGCCACTGCTGGGCATTTACTCCCAGGGGATTaGAAGCGGGATCTCAGAGAGATCAGCACAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: SYATAGHLLPGD*KRDLREISTTT Trigger: TGTGGTTGTGCTGATCTCTCTGAGATCCCGCTTCCAATCCCCTGGGAGTAAATGCCCAGCAGTGGCATAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CCA 72 bp | ATGCTGAACTACTGTGGGATGCAGCTATGCCACTGCTaGGCATTTACTCCCAGGGGATTGGAAGCGGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: MLNYCGMQLCHC*AFTPRGLEAGS Trigger: AGATCCCGCTTCCAATCCCCTGGGAGTAAATGCCCAGCAGTGGCATAGCTGCATCCCACAGTAGTTCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTTGGGGGAAGAAAGGCTGTCTGTGGGCTCTAGGCAGCAGGGCTCGTGTGTTGCGTAGCTGGCACTaGAGTTCTTTGACTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FIWGKKGCLWALGSRARVLRSWH*SSLTPL Trigger: CAGAGGAGTCAAAGAACTCAAGTGCCAGCTACGCAA...CACACGAGCCCTGCTGCCTAGAGCCCACAGACAGCCTTTCTTCCCCCAAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR TCA 72 bp | CTAAATTGTGGGAGCGCTCGGGGTGTCCATCACAGATaGGTGGACCAGCAGAAGTATGGTCAAAGAGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: LNCGSARGVHHR*VDQQKYGQRVT Trigger: GGTGACTCTTTGACCATACTTCTGCTGGTCCACTCATCTGTGATGGACACCCCGAGCGCTCCCACAATTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR TCA 72 bp | TCAGAATTTGAAACTCCCAGGCAGGGCCAGCAAGCATaGGGCAGGGTGGGAGCCTTGTTTTCCACTGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SEFETPRQGQQA*GRVGALFSTEE Trigger: TTCTTCAGTGGAAAACAAGGCTCCCACCCTGCCTCATGCTTGCTGGCCCTGCCTGGGAGTTTCAAATTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CCA 72 bp | CAACCCCAGGCGAGGTGGATGTTCCAAGATACAGCTTaGTGTCTGGTCCAATCCTCTGATCCTAACAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: QPQARWMFQDTA*CLVQSSDPNNR Trigger: CCTGTTGTTAGGATCAGAGGATTGGACCAGACACCAAGCTGTATCTTGGAACATCCACCTCGCCTGGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CCA 72 bp | TCCCAACACAGGTCGGAGCGTGGGGATTGTGGTCTTTaGAAGAGAGAGAGACTCCGTGTGAAAATTCTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SQHRSERGDCGL*KRERLRVKILV Trigger: CACGAGAATTTTCACACGGAGTCTCTCTCTCTTCCAAAGACCACAATCCCCACGCTCCGACCTGTGTTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CCA 72 bp | ACCGCTTTCCCAACACAGGTCGGAGCGTGGGGATTGTaGTCTTTGGAAGAGAGAGAGACTCCGTGTGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TAFPTQVGAWGL*SLEERETPCEN Trigger: ATTTTCACACGGAGTCTCTCTCTCTTCCAAAGACCACAATCCCCACGCTCCGACCTGTGTTGGGAAAGCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGTATAGATGGACTTGATTTAGTGTTAGGGTTGGGAGGTGCACTGAGACACGCGAGGCTGGCCCCGTaGTCCCTCTCTGAATCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FCIDGLDLVLGLGGALRHARLAP*SLSESS Trigger: GGAAGATTCAGAGAGGGACAACGGGGCCAGCCTCGC...GTGTCTCAGTGCACCTCCCAACCCTAACACTAAATCAAGTCCATCTATACAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGCTATCACTCAAGGTGGCTGGCGGCTATCTCTATGCTTTCTCTCCCCTCTCTGGCACTTGAGTTCTTaGACTCCTCTGGTGTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: YAITQGGWRLSLCFLSPLWHLSS*TPLVSP Trigger: TGGAGACACCAGAGGAGTCAAAGAACTCAAGTGCCA...GAGAGGGGAGAGAAAGCATAGAGATAGCCGCCAGCCACCTTGAGTGATAGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR GCA 72 bp | CACAAAGTCATGCTGAACTACTGTGGGATGCAGCTATaGCACTGCTGGGCATTTACTCCCAGGGGATTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HKVMLNYCGMQL*HCWAFTPRGLE Trigger: TTCCAATCCCCTGGGAGTAAATGCCCAGCAGTGGCATAGCTGCATCCCACAGTAGTTCAGCATGACTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CCA 72 bp | AGGCGAGGTGGATGTTCCAAGATACAGCTTGGTGTCTaGTCCAATCCTCTGATCCTAACAACAGGAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RRGGCSKIQLGV*SNPLILTTGAK Trigger: CTTGGCTCCTGTTGTTAGGATCAGAGGATTGGACCAGACACCAAGCTGTATCTTGGAACATCCACCTCGCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCCTTCTCAGCCCAACCCAAGACCCAAGCAAATAGAGATGTGACTGGGATGAAGGTATCAAGGAGCTaGGGAAGCCTCAAGAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: KAFSAQPKTQANRDVTGMKVSRS*GSLKNL Trigger: AAGGTTCTTGAGGCTTCCCAAGCTCCTTGATACCTT...CATCCCAGTCACATCTCTATTTGCTTGGGTCTTGGGTTGGGCTGAGAAGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR GCA 72 bp | CATTGGTGGCGGCAATGTAAAATTATTCAGCCCCTGTaGAGAACAGTATGGCGGCTCCTCACAAAGTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: HWWRQCKIIQPL*RTVWRLLTKSC Trigger: GCATGACTTTGTGAGGAGCCGCCATACTGTTCTGCACAGGGGCTGAATAATTTTACATTGCCGCCACCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGTATAGATGGACTTGATTTAGTGTTAGGGTTGGGAGGTGCACTGAGACACTCTGGCCTCCAACAGTaGAAGGAAGAGGGAAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FCIDGLDLVLGLGGALRHSGLQQ*KEEGKG Trigger: CCCCTTTCCCTCTTCCTTCAACTGTTGGAGGCCAGA...GTGTCTCAGTGCACCTCCCAACCCTAACACTAAATCAAGTCCATCTATACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CCA 72 bp | ACACATATAGTCACACGGTTTACAAGAGCTAAATTGTaGGAGCGCTCGGGGTGTCCATCACAGATGAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: THIVTRFTRAKL*ERSGCPSQMSG Trigger: TCCACTCATCTGTGATGGACACCCCGAGCGCTCCCACAATTTAGCTCTTGTAAACCGTGTGACTATATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CCA 72 bp | GGGTGTCCATCACAGATGAGTGGACCAGCAGAAGTATaGTCAAAGAGTCACCTTGAAATGTTAGTCCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GCPSQMSGPAEV*SKSHLEMLVPS Trigger: TGAAGGGACTAACATTTCAAGGTGACTCTTTGACCATACTTCTGCTGGTCCACTCATCTGTGATGGACACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR TCA 72 bp | CTGGTTTCTCTTGCTCAGGCTTTAGAAAGGTTTCAGTaGATTGGCGCTACCTATTTCAATCCATCCACCGCT | + |
|
Preference number: 3 (lower is better) Translates to: LVSLAQALERFQ*IGATYFNPSTA Trigger: AGCGGTGGATGGATTGAAATAGGTAGCGCCAATTCACTGAAACCTTTCTAAAGCCTGAGCAAGAGAAACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CCA 72 bp | TTCTCTTGCTCAGGCTTTAGAAAGGTTTCAGTGAATTaGCGCTACCTATTTCAATCCATCCACCGCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FSCSGFRKVSVN*RYLFQSIHRFP Trigger: GGGAAAGCGGTGGATGGATTGAAATAGGTAGCGCCAATTCACTGAAACCTTTCTAAAGCCTGAGCAAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGGGCGCTCTGCGAGGCTGGCCCCGTTGTCCCTCTCTGAATCTTCCTCTGGGCAGGCCCCAGCCTaGGTGACTCCATGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SEGRSARLAPLSLSESSSGQAPA*VTPCWH Trigger: GTGCCAGCATGGAGTCACCCAGGCTGGGGCCTGCCC...AGAGGAAGATTCAGAGAGGGACAACGGGGCCAGCCTCGCAGAGCGCCCCTCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATCCGGGGCTCAGGCACTaGCTCCTCCTCTGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSICRRWSLRTSWGALPDPGLRH*LLLCFS Trigger: GGAGAAGCAGAGGAGGAGCCAGTGCCTGAGCCCCGG...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCTCCTGGACAAGCCTCGGGGCAAATAGGACCCTGTTCTGGCCTCCAACAGCCGGGGCTCAGGCACTaGCTCCTCCTCTGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAPGQASGQIGPCSGLQQPGLRH*LLLCFS Trigger: GGAGAAGCAGAGGAGGAGCCAGTGCCTGAGCCCCGG...CTGTTGGAGGCCAGAACAGGGTCCTATTTGCCCCGAGGCTTGTCCAGGAGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCCCCGTTGTCCCTCTCTGAATCTTCCTCTGGAAGAGTTTGCCTCAGCCGGCAGAGGTCGGAAGTaGGGATCATCAGCCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GWPRCPSLNLPLEEFASAGRGRK*GSSARP Trigger: TGGCCGGGCTGATGATCCCCACTTCCGACCTCTGCC...GGCTGAGGCAAACTCTTCCAGAGGAAGATTCAGAGAGGGACAACGGGGCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTGGAGAGAAAGCCCTCCAAGGACGAAGGGACTGGTCAGGAGGGATGGATGGGGTGCCTCCCTGTaGCTCTGTAGCACCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WAWRESPPRTKGLVRRDGWGASL*LCSTCP Trigger: GGGACAGGTGCTACAGAGCCACAGGGAGGCACCCCA...TCCATCCCTCCTGACCAGTCCCTTCGTCCTTGGAGGGCTTTCTCTCCAAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATTCCGTCTGGTACGTGTaGACAGACCAGCCCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSICRRWSLRTSWGALPDSVWYV*TDQPVC Trigger: GCAGACGGGCTGGTCTGTGCACACGTACCAGACGGA...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTGGAGAGAAAGCCCTCCAAGGACGAAGGGACTGGTCAGGAGGGATGGACTGTCCCAGCCTCACTaGCTAGGCTGCTCTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: WAWRESPPRTKGLVRRDGLSQPH*LGCSDC Trigger: GCAGTCAGAGCAGCCTAGGCAGTGAGGCTGGGACAG...TCCATCCCTCCTGACCAGTCCCTTCGTCCTTGGAGGGCTTTCTCTCCAAGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATAGCCCGTCTGCAGCTTaGCTCTCAGAGCAAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSICRRWSLRTSWGALPDSPSAA*LSEQAA Trigger: GGCAGCTTGCTCTGAGAGCCAAGCTGCAGACGGGCT...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR CCA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATCCGCAGAGCAGACACTaGGAGAGACCGTTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSICRRWSLRTSWGALPDPQSRH*ERPLPI Trigger: GATGGGCAACGGTCTCTCCCAGTGTCTGCTCTGCGG...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTGTCCCTCTCTGAATCTTCCTCTGGAAGAGTTTGCCTCAGCCTGGAGATGACCCTGGGCTCAGGCTaGGCTGGGGTGCCTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLSLSESSSGRVCLSLEMTLGSG*AGVPPC Trigger: ACAGGGAGGCACCCCAGCCCAGCCTGAGCCCAGGGT...CATCTCCAGGCTGAGGCAAACTCTTCCAGAGGAAGATTCAGAGAGGGACAACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CAA 72 bp | GAACCTTCAGAGGGGCGCTCTGCGAGGCTGGCCCCGTaGTCCCTCTCTGAATCTTCCTCTGGAAGAGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EPSEGRSARLAP*SLSESSSGRVC Trigger: GCAAACTCTTCCAGAGGAAGATTCAGAGAGGGACAACGGGGCCAGCCTCGCAGAGCGCCCCTCTGAAGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATCCCATCACGTTCCTCTaGATTGTCTCCAGCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSICRRWSLRTSWGALPDPITFL*IVSSRS Trigger: GGAGCGGCTGGAGACAATGCAGAGGAACGTGATGGG...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGGGCGCTCTGCGAGGCTGGCCCCGTTGTCCCTCTCTGAATCTTCCTCTTCAGTAGCGGGGAGTTaGCCATGTGTGTCTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEGRSARLAPLSLSESSSSVAGS*PCVSFA Trigger: GGCAAAAGACACACATGGGCAACTCCCCGCTACTGA...AGAGGAAGATTCAGAGAGGGACAACGGGGCCAGCCTCGCAGAGCGCCCCTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | GGGCGCTCTGCGAGGCTGGCCCCGTTGTCCCTCTCTGAATCTTCCTCTGGAAGACAAGCTGCCGATCGTTaGGGCAAACCCACTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRSARLAPLSLSESSSGRQAADR*GKPTDH Trigger: ATGATCAGTGGGTTTGCCCCAACGATCGGCAGCTTG...TCTTCCAGAGGAAGATTCAGAGAGGGACAACGGGGCCAGCCTCGCAGAGCGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCCTTAATGGAGATGTTCTGCTTGCCAACCCCAGGCGAGGTGGATGTTCCACCGGGGCTCAGGCACTaGCTCCTCCTCTGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CALMEMFCLPTPGEVDVPPGLRH*LLLCFS Trigger: GGAGAAGCAGAGGAGGAGCCAGTGCCTGAGCCCCGG...TGGAACATCCACCTCGCCTGGGGTTGGCAAGCAGAACATCTCCATTAAGGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGAGAAAGCCCTCCAAGGACGAAGGGACTGGTCAGGAGGGATGGAACTGCCGCAGAGCAGACACTaGGAGAGACCGTTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LGEKALQGRRDWSGGMELPQSRH*ERPLPI Trigger: GATGGGCAACGGTCTCTCCCAGTGTCTGCTCTGCGG...CAGTTCCATCCCTCCTGACCAGTCCCTTCGTCCTTGGAGGGCTTTCTCTCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATCGCCCAATTCTCTGCTaGTCCAGGATGTCTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSICRRWSLRTSWGALPDRPILC*SRMSSL Trigger: GAGGCTAGACATCCTGGAGCAGCAGAGAATTGGGCG...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATACTGGGAGAGACCGTTaGCCATCACGTTCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSICRRWSLRTSWGALPDTGRDR*PSRSSA Trigger: TGCAGAGGAACGTGATGGGCAACGGTCTCTCCCAGT...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGGGCGCTCTGCGAGGCTGGCCCCGTTGTCCCTCTCTGAATCTTCCTCTTCTTCCTGCAGTCTTTaGAGAATACGGAGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SEGRSARLAPLSLSESSSSSCSL*RIRRSC Trigger: GCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGA...AGAGGAAGATTCAGAGAGGGACAACGGGGCCAGCCTCGCAGAGCGCCCCTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATCTCTGCTTCTCCGTCTaGTACGTGTGCACAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSICRRWSLRTSWGALPDLCFSV*YVCTDQ Trigger: CTGGTCTGTGCACACGTACCAGACGGAGAAGCAGAG...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGAGAAAGCCCTCCAAGGACGAAGGGACTGGTCAGGAGGGATGGAACTGGAGGCTGTGTTTCTGTaGGCTCCACAGGCAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGEKALQGRRDWSGGMELEAVFL*APQAEV Trigger: GACCTCTGCCTGTGGAGCCCACAGAAACACAGCCTC...CAGTTCCATCCCTCCTGACCAGTCCCTTCGTCCTTGGAGGGCTTTCTCTCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATGCTCTCTGGATGACCTaGAGGATGATCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSICRRWSLRTSWGALPDALWMT*RMISSS Trigger: AGAGCTGGAGATCATCCTTCAGGTCATCCAGAGAGC...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR TCA 90 bp | GGCTGGCCCCGTTGTCCCTCTCTGAATCTTCCTCTGGAAGAGTTTGCCTCAGCCGGAGGAGCTGAGATCTaGGTCACTGTCACTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GWPRCPSLNLPLEEFASAGGAEI*VTVTVT Trigger: AGTGACAGTGACAGTGACTCAGATCTCAGCTCCTCC...GGCTGAGGCAAACTCTTCCAGAGGAAGATTCAGAGAGGGACAACGGGGCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGGATGCAGCTATGCCACTGCTGGGCATTTACTCCCAGGGGATTGGAAGCGCGCCCAATTCTCTGCTaGTCCAGGATGTCTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGMQLCHCWAFTPRGLEARPILC*SRMSSL Trigger: GAGGCTAGACATCCTGGAGCAGCAGAGAATTGGGCG...CGCTTCCAATCCCCTGGGAGTAAATGCCCAGCAGTGGCATAGCTGCATCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR GCA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATGCTTCCTGCAGTCTTTaGAGAATACGGAGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSICRRWSLRTSWGALPDASCSL*RIRRSC Trigger: GCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGC...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR GCA 90 bp | AAGGCCTTCTCAGCCCAACCCAAGACCCAAGCAAATAGAGATGTGACTGGGATGGCCTGGGTGACTCCATaGTGGCACCTGAGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAFSAQPKTQANRDVTGMAWVTP*WHLSPL Trigger: GAGGGGACTCAGGTGCCAGCATGGAGTCACCCAGGC...CATCCCAGTCACATCTCTATTTGCTTGGGTCTTGGGTTGGGCTGAGAAGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATCAAGCTGCCGATCGTTaGGGCAAACCCACTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSICRRWSLRTSWGALPDQAADR*GKPTDH Trigger: ATGATCAGTGGGTTTGCCCCAACGATCGGCAGCTTG...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR CCA 90 bp | AACTACTGTGGGATGCAGCTATGCCACTGCTGGGCATTTACTCCCAGGGGATTGAGCCCGTCTGCAGCTTaGCTCTCAGAGCAAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NYCGMQLCHCWAFTPRGLSPSAA*LSEQAA Trigger: GGCAGCTTGCTCTGAGAGCCAAGCTGCAGACGGGCT...CAATCCCCTGGGAGTAAATGCCCAGCAGTGGCATAGCTGCATCCCACAGTAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR CCA 90 bp | AAAACCCAGAGGCCAATAGGGGGCTTCAGGGAAACCTCAAAGCTGGATTTAACTCACAGGGGCCGCTTCTaGCCGGGGGAAGCCTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: KTQRPIGGFRETSKLDLTHRGRF*PGEASI Trigger: GATCGAGGCTTCCCCCGGCCAGAAGCGGCCCCTGTG...AGTTAAATCCAGCTTTGAGGTTTCCCTGAAGCCCCCTATTGGCCTCTGGGTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | GTGCATATAGGAAGGCCTTCTCAGCCCAACCCAAGACCCAAGCAAATAGAGATGTTTTGCCGGGTACCCTaGGCTCAGGCTGGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHIGRPSQPNPRPKQIEMFCRVP*AQAGLG Trigger: CCCCAGCCCAGCCTGAGCCCAGGGTACCCGGCAAAA...CATCTCTATTTGCTTGGGTCTTGGGTTGGGCTGAGAAGGCCTTCCTATATGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CAA 72 bp | CCAGCAGCAACAGGCAAAAGGTTAACGGTGGTGGGCTaGGAGAGAAAGCCCTCCAAGGACGAAGGGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAATGKRLTVVG*ERKPSKDEGTG Trigger: ACCAGTCCCTTCGTCCTTGGAGGGCTTTCTCTCCAAGCCCACCACCGTTAACCTTTTGCCTGTTGCTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR TCA 90 bp | ACCAAGAAAGCCCTGTGTGGTCCCACCCAAACTTCAGTGCATATAGGAAGGCCTCTCCATGCTGGCACCTaGGTCCCCTCTAGGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKKALCGPTQTSVHIGRPLHAGT*VPSRLV Trigger: GACAAGCCTAGAGGGGACTCAGGTGCCAGCATGGAG...AGGCCTTCCTATATGCACTGAAGTTTGGGTGGGACCACACAGGGCTTTCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR GCA 90 bp | TATGCTATCACTCAAGGTGGCTGGCGGCTATCTCTATGCTTTCTCTCCCCTCTCTCCGTCTGGTACGTGTaGACAGACCAGCCCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YAITQGGWRLSLCFLSPLSVWYV*TDQPVC Trigger: GCAGACGGGCTGGTCTGTGCACACGTACCAGACGGA...GAGAGGGGAGAGAAAGCATAGAGATAGCCGCCAGCCACCTTGAGTGATAGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR GCA 90 bp | GTTGGGAGGTGCACTGAGACACTGATCTGGCTGGTTTCTCTTGCTCAGGCTTTATCCGTCTGGTACGTGTaGACAGACCAGCCCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGRCTETLIWLVSLAQALSVWYV*TDQPVC Trigger: GCAGACGGGCTGGTCTGTGCACACGTACCAGACGGA...TAAAGCCTGAGCAAGAGAAACCAGCCAGATCAGTGTCTCAGTGCACCTCCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CAA 72 bp | CAGCAGGGCTCGTGTGCCTTAATGGAGATGTTCTGCTaGCCAACCCCAGGCGAGGTGGATGTTCCAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: QQGSCALMEMFC*PTPGEVDVPRY Trigger: GTATCTTGGAACATCCACCTCGCCTGGGGTTGGCAAGCAGAACATCTCCATTAAGGCACACGAGCCCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CAA 72 bp | GGTGGGGGCAAGCATGCTCAGTCCCCAAACACTGGCTaGTTGAGTAGCACGTCAAGGTATCAAGGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGGKHAQSPNTG*LSSTSRYQGAW Trigger: CCAAGCTCCTTGATACCTTGACGTGCTACTCAACAAGCCAGTGTTTGGGGACTGAGCATGCTTGCCCCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CAA 72 bp | TCCACCGCTTTCCCAACACAGGTCGGAGCGTGGGGATaGTGGTCTTTGGAAGAGAGAGAGACTCCGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: STAFPTQVGAWG*WSLEERETPCE Trigger: TTCACACGGAGTCTCTCTCTCTTCCAAAGACCACAATCCCCACGCTCCGACCTGTGTTGGGAAAGCGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR GCA 90 bp | ACCAAGAAAGCCCTGTGTGGTCCCACCCAAACTTCAGTGCATATAGGAAGGCCTCCCATCACGTTCCTCTaGATTGTCTCCAGCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKKALCGPTQTSVHIGRPPITFL*IVSSRS Trigger: GGAGCGGCTGGAGACAATGCAGAGGAACGTGATGGG...AGGCCTTCCTATATGCACTGAAGTTTGGGTGGGACCACACAGGGCTTTCTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR GCA 90 bp | AACTACTGTGGGATGCAGCTATGCCACTGCTGGGCATTTACTCCCAGGGGATTGACTGGGAGAGACCGTTaGCCATCACGTTCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NYCGMQLCHCWAFTPRGLTGRDR*PSRSSA Trigger: TGCAGAGGAACGTGATGGGCAACGGTCTCTCCCAGT...CAATCCCCTGGGAGTAAATGCCCAGCAGTGGCATAGCTGCATCCCACAGTAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR GCA 90 bp | GCTTGGAGAGAAAGCCCTCCAAGGACGAAGGGACTGGTCAGGAGGGATGGAACTCCTCTCTCTGCTCACTaGAGATCTTACACAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AWRESPPRTKGLVRRDGTPLSAH*RSYTAT Trigger: TGTGGCTGTGTAAGATCTGCAGTGAGCAGAGAGAGG...AGTTCCATCCCTCCTGACCAGTCCCTTCGTCCTTGGAGGGCTTTCTCTCCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTTGGGGGAAGAAAGGCTGTCTGTGGGCTCTAGGCAGCAGGGCTCGTGTGCAAGCTGCCGATCGTTaGGGCAAACCCACTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FIWGKKGCLWALGSRARVQAADR*GKPTDH Trigger: ATGATCAGTGGGTTTGCCCCAACGATCGGCAGCTTG...CACACGAGCCCTGCTGCCTAGAGCCCACAGACAGCCTTTCTTCCCCCAAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR CCA 90 bp | ATGGCGGCTCCTCACAAAGTCATGCTGAACTACTGTGGGATGCAGCTATGCCACCTCTGCTTCTCCGTCTaGTACGTGTGCACAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: MAAPHKVMLNYCGMQLCHLCFSV*YVCTDQ Trigger: CTGGTCTGTGCACACGTACCAGACGGAGAAGCAGAG...GTGGCATAGCTGCATCCCACAGTAGTTCAGCATGACTTTGTGAGGAGCCGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| 3UTR CAA 72 bp | GAAGGACGTCTGTGCCTCTGGTCCTCCGTCTGTACTTaGCGTAGCTGGCACTTGAGTTCTTTGACTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGRLCLWSSVCT*RSWHLSSLTPL Trigger: CAGAGGAGTCAAAGAACTCAAGTGCCAGCTACGCAAAGTACAGACGGAGGACCAGAGGCACAGACGTCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR GCA 90 bp | GTTGGGAGGTGCACTGAGACACTGATCTGGCTGGTTTCTCTTGCTCAGGCTTTAACTGGGAGAGACCGTTaGCCATCACGTTCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGRCTETLIWLVSLAQALTGRDR*PSRSSA Trigger: TGCAGAGGAACGTGATGGGCAACGGTCTCTCCCAGT...TAAAGCCTGAGCAAGAGAAACCAGCCAGATCAGTGTCTCAGTGCACCTCCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTATCACTCAAGGTGGCTGGCGGCTATCTCTATGCTTTCTCTCCCCTCTCCGCTTCCTGCAGTCTTTaGAGAATACGGAGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MLSLKVAGGYLYAFSPLSASCSL*RIRRSC Trigger: GCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGC...GGAGAGGGGAGAGAAAGCATAGAGATAGCCGCCAGCCACCTTGAGTGATAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR GCA 90 bp | TCAGCTCCTGGACAAGCCTCGGGGCAAATAGGACCCTGTTCTGGCCTCCAACAGTGCAGACTTTCTTCCTaGAGTCTTTGCAGAATACGG | + |
|
Preference number: 4 (lower is better) Translates to: SAPGQASGQIGPCSGLQQCRLSS*SLCRIR Trigger: CCGTATTCTGCAAAGACTGCAGGAAGAAAGTCTGCA...CTGTTGGAGGCCAGAACAGGGTCCTATTTGCCCCGAGGCTTGTCCAGGAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGAGAAAGCCCTCCAAGGACGAAGGGACTGGTCAGGAGGGATGGAACTGTTCCAGACCTCTCTCTaGTCACTGCAGATCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: LGEKALQGRRDWSGGMELFQTSL*SLQILH Trigger: GTGTAAGATCTGCAGTGAGCAGAGAGAGGTCTGGAA...CAGTTCCATCCCTCCTGACCAGTCCCTTCGTCCTTGGAGGGCTTTCTCTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCGGGATCTCAGAGAGATCAGCACAACCACACATATAGTCACACGGTTTACCCGCAGAGCAGACACTaGGAGAGACCGTTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EAGSQRDQHNHTYSHTVYPQSRH*ERPLPI Trigger: GATGGGCAACGGTCTCTCCCAGTGTCTGCTCTGCGG...GTAAACCGTGTGACTATATGTGTGGTTGTGCTGATCTCTCTGAGATCCCGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR CCA 90 bp | CCGTTGTCCCTCTCTGAATCTTCCTCTGGAAGAGTTTGCCTCAGCCTGGAGATGGGGGCAAGATGTACTTaGGGAGCCCTTTGTAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLSESSSGRVCLSLEMGARCT*GALCRT Trigger: GGTTCTACAAAGGGCTCCCCAAGTACATCTTGCCCC...CATCTCCAGGCTGAGGCAAACTCTTCCAGAGGAAGATTCAGAGAGGGACAACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| 3UTR CAA 72 bp | CTCTGGTCCTCCGTCTGTACTTTGCGTAGCTGGCACTaGAGTTCTTTGACTCCTCTGGTGTCTCCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWSSVCTLRSWH*SSLTPLVSPSA Trigger: TGCAGATGGAGACACCAGAGGAGTCAAAGAACTCAAGTGCCAGCTACGCAAAGTACAGACGGAGGACCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR TCA 90 bp | AAGGCCTTCTCAGCCCAACCCAAGACCCAAGCAAATAGAGATGTGACTGGGATGGCTCTCTGGATGACCTaGAGGATGATCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAFSAQPKTQANRDVTGMALWMT*RMISSS Trigger: AGAGCTGGAGATCATCCTTCAGGTCATCCAGAGAGC...CATCCCAGTCACATCTCTATTTGCTTGGGTCTTGGGTTGGGCTGAGAAGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR TCA 90 bp | CACAAAGTCATGCTGAACTACTGTGGGATGCAGCTATGCCACTGCTGGGCATTTGCTCTCTGGATGACCTaGAGGATGATCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKVMLNYCGMQLCHCWAFALWMT*RMISSS Trigger: AGAGCTGGAGATCATCCTTCAGGTCATCCAGAGAGC...AAATGCCCAGCAGTGGCATAGCTGCATCCCACAGTAGTTCAGCATGACTTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR TCA 90 bp | TTCTGTATAGATGGACTTGATTTAGTGTTAGGGTTGGGAGGTGCACTGAGACACCACCTTTTGTGCCCTTaGCCCCAGAGGGCAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FCIDGLDLVLGLGGALRHHLLCP*PQRARV Trigger: GACCCTTGCCCTCTGGGGTCAAGGGCACAAAAGGTG...GTGTCTCAGTGCACCTCCCAACCCTAACACTAAATCAAGTCCATCTATACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGTTAGGTTTCTCATCATTAGTACCAAGAAAGCCCTGTGTGGTCCCACCCCTCGATCCCACACTTaGTGCAGACTTTCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRVRFLIISTKKALCGPTPRSHT*CRLSSC Trigger: GCAGGAAGAAAGTCTGCACCAAGTGTGGGATCGAGG...GGTGGGACCACACAGGGCTTTCTTGGTACTAATGATGAGAAACCTAACCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTGCTGATGGGTTACGTGTCACAGGGACATGGTAAGTTTGTCTTCTGCCAGCACTGTCACTGTCACTaGAAACCACTCTCCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLMGYVSQGHGKFVFCQHCHCH*KPLSLG Trigger: CCCGAGGGAGAGTGGTTTCCAGTGACAGTGACAGTG...CTGGCAGAAGACAAACTTACCATGTCCCTGTGACACGTAACCCATCAGCACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACTGGGATGGGAGAAGAACAATAAATAAAGGTGGGGTGCTGAGTGAGATAGTAGAACCAGGCCCCTaGCCTCTTCCAGACCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CDWDGRRTINKGGVLSEIVEPGP*PLPDLS Trigger: AGAGAGGTCTGGAAGAGGTCAGGGGCCTGGTTCTAC...TATCTCACTCAGCACCCCACCTTTATTTATTGTTCTTCTCCCATCCCAGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR GCA 90 bp | TGTGACTGGGATGGGAGAAGAACAATAAATAAAGGTGGGGTGCTGAGTGAGATACGATCCCACACTTGGTaGAGACTTTCTTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CDWDGRRTINKGGVLSEIRSHTW*RLSSCS Trigger: ACTGCAGGAAGAAAGTCTGCACCAAGTGTGGGATCG...TATCTCACTCAGCACCCCACCTTTATTTATTGTTCTTCTCCCATCCCAGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CCA 90 bp | AAGAACAAAAAGCGCTTTAATGTCTTAGAGGAAGCTGTGTTTCAGGGTGGAACACTCTGCTTCTCCGTCTaGTACGTGTGCACAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KNKKRFNVLEEAVFQGGTLCFSV*YVCTDQ Trigger: CTGGTCTGTGCACACGTACCAGACGGAGAAGCAGAG...TGTTCCACCCTGAAACACAGCTTCCTCTAAGACATTAAAGCGCTTTTTGTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS CCA 90 bp | TCCCAGCCTCACTGCCTAGGCTGCTCTGACTGCCCGAGAGATGGCTaGGTGGACGGGCAGGCCCCAGCCTGGGTGACTCCATGCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQPHCLGCSDCPRDG*VDGQAPAWVTPCWH Trigger: GTGCCAGCATGGAGTCACCCAGGCTGGGGCCTGCCCGTCCACCCAGCCATCTCTCGGGCAGTCAGAGCAGCCTAGGCAGTGAGGCTGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS GCA 90 bp | GGAATCCCAGCACCTCCCCGCAGAGCAGACACTGGGAGAGACCGTTaGCCATCACGTTCCTCTGCATTGTCTCCAGCCGCTCCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GIPAPPRRADTGRDR*PSRSSALSPAAPPA Trigger: GGCTGGTGGAGCGGCTGGAGACAATGCAGAGGAACGTGATGGGCAACGGTCTCTCCCAGTGTCTGCTCTGCGGGGAGGTGCTGGGATTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021208.11 ENSMUST00000066504.11 ENSMUST00000108420.9 ENSMUST00000121287.8 |
||
| CDS GCA 90 bp | CCGCAGAGCAGACACTGGGAGAGACCGTTGCCCATCACGTTCCTCTaGATTGTCTCCAGCCGCTCCACCAGCCGCCCAATTCTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQSRHWERPLPITFL*IVSSRSTSRPILCC Trigger: GCAGCAGAGAATTGGGCGGCTGGTGGAGCGGCTGGAGACAATGCAGAGGAACGTGATGGGCAACGGTCTCTCCCAGTGTCTGCTCTGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021208.11 ENSMUST00000066504.11 ENSMUST00000108420.9 ENSMUST00000121287.8 ENSMUST00000152035.2 |
||
| CDS TCA 90 bp | CCCAGAGGGCAAGGGTCTGTCCTCCAGGCTGGAGGAGCTGAGATCTaGGTCACTGTCACTGTCACTGGAAACCACTCTCCCTCGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRGQGSVLQAGGAEI*VTVTVTGNHSPSGP Trigger: TGGGCCCGAGGGAGAGTGGTTTCCAGTGACAGTGACAGTGACTCAGATCTCAGCTCCTCCAGCCTGGAGGACAGACCCTTGCCCTCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS GCA 90 bp | CTAGGAAGTGCTGCAGCCAGCGGATCCCAAGCTTCCTGCAGTCTTTaGAGAATACGGAGGAGCTGCCCAGGAATCCCAGCACCTCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSAAASGSQASCSL*RIRRSCPGIPAPPR Trigger: GCGGGGAGGTGCTGGGATTCCTGGGCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGCTTGGGATCCGCTGGCTGCAGCACTTCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR CAA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATCAGCCCGTCTGCAGCTaGGCTCTCAGAGCAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSICRRWSLRTSWGALPDQPVCS*ALRASC Trigger: GCAGCTTGCTCTGAGAGCCAAGCTGCAGACGGGCTG...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS GCA 90 bp | AGCGGATCCCAAGCTTCCTGCAGTCTTTGCAGAATACGGAGGAGCTaGCCAGGAATCCCAGCACCTCCCCGCAGAGCAGACACTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGSQASCSLCRIRRS*PGIPAPPRRADTGR Trigger: TCTCCCAGTGTCTGCTCTGCGGGGAGGTGCTGGGATTCCTGGGCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGCTTGGGATCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS CCA 90 bp | ATGTGTAGACACGGCTGGTTTCAGCACTCGGAGGCTGTGTTTCTGTaGGCTCCACAGGCAGAGGTCGGAAGTGGGGATCATCAGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: MCRHGWFQHSEAVFL*APQAEVGSGDHQPG Trigger: GCCGGGCTGATGATCCCCACTTCCGACCTCTGCCTGTGGAGCCCACAGAAACACAGCCTCCGAGTGCTGAAACCAGCCGTGTCTACACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS CCA 90 bp | TCTCTCTGCTCACTGCAGATCTTACACAGCCACAGGGGCCGCTTCTaGCCGGGGGAAGCCTCGATCCCACACTTGGTGCAGACTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLCSLQILHSHRGRF*PGEASIPHLVQTFF Trigger: GAAGAAAGTCTGCACCAAGTGTGGGATCGAGGCTTCCCCCGGCCAGAAGCGGCCCCTGTGGCTGTGTAAGATCTGCAGTGAGCAGAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS GCA 90 bp | GCAGGCTTTCTAGGAAGTGCTGCAGCCAGCGGATCCCAAGCTTCCTaGAGTCTTTGCAGAATACGGAGGAGCTGCCCAGGAATCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGFLGSAAASGSQAS*SLCRIRRSCPGIPA Trigger: TGCTGGGATTCCTGGGCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGCTTGGGATCCGCTGGCTGCAGCACTTCCTAGAAAGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS GCA 90 bp | TGGTGCAGACTTTCTTCCTGCAGTCTTTGCAGAATACGGAGGAGCTaGCCAGGAATCCCAGCACCTCCCCGCAGAGCAGACACTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WCRLSSCSLCRIRRS*PGIPAPPRRADTGR Trigger: TCTCCCAGTGTCTGCTCTGCGGGGAGGTGCTGGGATTCCTGGGCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGAAAGTCTGCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAGGGGCGCTCTGCGAGGCTGGCCCCGTTGTCCCTCTCTGAATCTTCCTCTTTCTTCCTGCAGTCTTaGCAGAATACGGAGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SEGRSARLAPLSLSESSSFFLQS*QNTEEL Trigger: CAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGAA...AGAGGAAGATTCAGAGAGGGACAACGGGGCCAGCCTCGCAGAGCGCCCCTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGGAGCACTCCCAGATAGCTTCCTGCAGTCTTaGCAGAATACGGAGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSICRRWSLRTSWGALPDSFLQS*QNTEEL Trigger: CAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGCT...ATCTGGGAGTGCTCCCCAGCTAGTCCTCAGAGACCACCTCCTGCAGATGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR CAA 90 bp | ATGTTCCAAGATACAGCTTGGTGTCTGGTCCAATCCTCTGATCCTAACAACAGGCAGCCCGTCTGCAGCTaGGCTCTCAGAGCAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MFQDTAWCLVQSSDPNNRQPVCS*ALRASC Trigger: GCAGCTTGCTCTGAGAGCCAAGCTGCAGACGGGCTG...CCTGTTGTTAGGATCAGAGGATTGGACCAGACACCAAGCTGTATCTTGGAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS GCA 90 bp | CACGTGAGATCTCTGTTCAGAATCAGCAGGCTTTCTAGGAAGTGCTaGAGCCAGCGGATCCCAAGCTTCCTGCAGTCTTTGCAGAATACG | + |
|
Preference number: 5 (lower is better) Translates to: HVRSLFRISRLSRKC*SQRIPSFLQSLQNT Trigger: CGTATTCTGCAAAGACTGCAGGAAGCTTGGGATCCGCTGGCTGCAGCACTTCCTAGAAAGCCTGCTGATTCTGAACAGAGATCTCACGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS-3UTR CAA 90 bp | TTCTGTATAGATGGACTTGATTTAGTGTTAGGGTTGGGAGGTGCACTGAGACACCAGCCCGTCTGCAGCTaGGCTCTCAGAGCAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FCIDGLDLVLGLGGALRHQPVCS*ALRASC Trigger: GCAGCTTGCTCTGAGAGCCAAGCTGCAGACGGGCTG...GTGTCTCAGTGCACCTCCCAACCCTAACACTAAATCAAGTCCATCTATACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTCCAAGATACAGCTTGGTGTCTGGTCCAATCCTCTGATCCTAACAACAGGAGCTTCCTGCAGTCTTaGCAGAATACGGAGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MFQDTAWCLVQSSDPNNRSFLQS*QNTEEL Trigger: CAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGCT...CCTGTTGTTAGGATCAGAGGATTGGACCAGACACCAAGCTGTATCTTGGAACAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021208.11 |
||
| CDS-3UTR CAA 90 bp | CTGAAGAACAAAAAGCGCTTTAATGTCTTAGAGGAAGCTGTGTTTCAGGGTGGAGCCTCGATCCCACACTaGGTGCAGACTTTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKNKKRFNVLEEAVFQGGASIPH*VQTFFL Trigger: CAGGAAGAAAGTCTGCACCAAGTGTGGGATCGAGGC...TCCACCCTGAAACACAGCTTCCTCTAAGACATTAAAGCGCTTTTTGTTCTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121287.8 |
||
| CDS CCA 72 bp | CATGTGTGTCTTTTGCCGGGTACCCTGGGCTCAGGCTaGGCTGGGGTGCCTCCCTGTGGCTCTGTAGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: HVCLLPGTLGSG*AGVPPCGSVAP Trigger: AGGTGCTACAGAGCCACAGGGAGGCACCCCAGCCCAGCCTGAGCCCAGGGTACCCGGCAAAAGACACACATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS CAA 90 bp | AGGAATCCCAGCACCTCCCCGCAGAGCAGACACTGGGAGAGACCGTaGCCCATCACGTTCCTCTGCATTGTCTCCAGCCGCTCCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RNPSTSPQSRHWERP*PITFLCIVSSRSTS Trigger: GCTGGTGGAGCGGCTGGAGACAATGCAGAGGAACGTGATGGGCAACGGTCTCTCCCAGTGTCTGCTCTGCGGGGAGGTGCTGGGATTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021208.11 ENSMUST00000066504.11 ENSMUST00000108420.9 ENSMUST00000121287.8 |
||
| CDS CCA 72 bp | TCACTGCAGATCTTACACAGCCACAGGGGCCGCTTCTaGCCGGGGGAAGCCTCGATCCCACACTTGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLQILHSHRGRF*PGEASIPHLVQ Trigger: CTGCACCAAGTGTGGGATCGAGGCTTCCCCCGGCCAGAAGCGGCCCCTGTGGCTGTGTAAGATCTGCAGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS CAA 72 bp | AGCACCTCCCCGCAGAGCAGACACTGGGAGAGACCGTaGCCCATCACGTTCCTCTGCATTGTCTCCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: STSPQSRHWERP*PITFLCIVSSR Trigger: GCGGCTGGAGACAATGCAGAGGAACGTGATGGGCAACGGTCTCTCCCAGTGTCTGCTCTGCGGGGAGGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021208.11 ENSMUST00000066504.11 ENSMUST00000108420.9 ENSMUST00000121287.8 |
||
| CDS GCA 72 bp | GTCTCCAGCCGCTCCACCAGCCGCCCAATTCTCTGCTaGTCCAGGATGTCTAGCCTCTCTGCTCTCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: VSSRSTSRPILC*SRMSSLSALWM Trigger: CATCCAGAGAGCAGAGAGGCTAGACATCCTGGAGCAGCAGAGAATTGGGCGGCTGGTGGAGCGGCTGGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021208.11 ENSMUST00000066504.11 ENSMUST00000108420.9 ENSMUST00000121287.8 ENSMUST00000152035.2 |
||
| CDS CAA 90 bp | TCTAGGAAGTGCTGCAGCCAGCGGATCCCAAGCTTCCTGCAGTCTTaGCAGAATACGGAGGAGCTGCCCAGGAATCCCAGCACCTCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SRKCCSQRIPSFLQS*QNTEELPRNPSTSP Trigger: CGGGGAGGTGCTGGGATTCCTGGGCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGCTTGGGATCCGCTGGCTGCAGCACTTCCTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS GCA 72 bp | TTCTCCGTCTGGTACGTGTGCACAGACCAGCCCGTCTaGAGCTTGGCTCTCAGAGCAAGCTGCCGATCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSVWYVCTDQPV*SLALRASCRSL Trigger: CAACGATCGGCAGCTTGCTCTGAGAGCCAAGCTGCAGACGGGCTGGTCTGTGCACACGTACCAGACGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021208.11 ENSMUST00000066504.11 ENSMUST00000108420.9 ENSMUST00000121287.8 ENSMUST00000152035.2 |
||
| CDS GCA 72 bp | AGACACTGGGAGAGACCGTTGCCCATCACGTTCCTCTaGATTGTCTCCAGCCGCTCCACCAGCCGCCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: RHWERPLPITFL*IVSSRSTSRPI Trigger: AATTGGGCGGCTGGTGGAGCGGCTGGAGACAATGCAGAGGAACGTGATGGGCAACGGTCTCTCCCAGTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021208.11 ENSMUST00000066504.11 ENSMUST00000108420.9 ENSMUST00000121287.8 ENSMUST00000152035.2 |
||
| CDS GCA 72 bp | CAAGCTTCCTGCAGTCTTTGCAGAATACGGAGGAGCTaGCCAGGAATCCCAGCACCTCCCCGCAGAGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: QASCSLCRIRRS*PGIPAPPRRAD Trigger: GTCTGCTCTGCGGGGAGGTGCTGGGATTCCTGGGCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS GCA 72 bp | GCTGCAGCCAGCGGATCCCAAGCTTCCTGCAGTCTTTaGAGAATACGGAGGAGCTGCCCAGGAATCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAASGSQASCSL*RIRRSCPGIPA Trigger: TGCTGGGATTCCTGGGCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGCTTGGGATCCGCTGGCTGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS GCA 72 bp | CTAGGAAGTGCTGCAGCCAGCGGATCCCAAGCTTCCTaGAGTCTTTGCAGAATACGGAGGAGCTGCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGSAAASGSQAS*SLCRIRRSCPG Trigger: TCCTGGGCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGCTTGGGATCCGCTGGCTGCAGCACTTCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||
| CDS GCA 72 bp | CTTTCTTCCTGCAGTCTTTGCAGAATACGGAGGAGCTaGCCAGGAATCCCAGCACCTCCCCGCAGAGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LSSCSLCRIRRS*PGIPAPPRRAD Trigger: GTCTGCTCTGCGGGGAGGTGCTGGGATTCCTGGGCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS CCA 72 bp | AAACCACTCTCCCTCGGGCCCATGTGTAGACACGGCTaGTTTCAGCACTCGGAGGCTGTGTTTCTGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KPLSLGPMCRHG*FQHSEAVFLWA Trigger: AGCCCACAGAAACACAGCCTCCGAGTGCTGAAACCAGCCGTGTCTACACATGGGCCCGAGGGAGAGTGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS CAA 72 bp | GGCCGCTTCTGGCCGGGGGAAGCCTCGATCCCACACTaGGTGCAGACTTTCTTCCTGCAGTCTTTGCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GRFWPGEASIPH*VQTFFLQSLQN Trigger: ATTCTGCAAAGACTGCAGGAAGAAAGTCTGCACCAAGTGTGGGATCGAGGCTTCCCCCGGCCAGAAGCGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS CCA 72 bp | GCCGCTTCTGGCCGGGGGAAGCCTCGATCCCACACTTaGTGCAGACTTTCTTCCTGCAGTCTTTGCAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: AASGRGKPRSHT*CRLSSCSLCRI Trigger: TATTCTGCAAAGACTGCAGGAAGAAAGTCTGCACCAAGTGTGGGATCGAGGCTTCCCCCGGCCAGAAGCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS GCA 72 bp | TCCCACACTTGGTGCAGACTTTCTTCCTGCAGTCTTTaGAGAATACGGAGGAGCTGCCCAGGAATCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SHTWCRLSSCSL*RIRRSCPGIPA Trigger: TGCTGGGATTCCTGGGCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGAAAGTCTGCACCAAGTGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS CAA 72 bp | ATCCCACACTTGGTGCAGACTTTCTTCCTGCAGTCTTaGCAGAATACGGAGGAGCTGCCCAGGAATCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IPHLVQTFFLQS*QNTEELPRNPS Trigger: GCTGGGATTCCTGGGCAGCTCCTCCGTATTCTGCAAAGACTGCAGGAAGAAAGTCTGCACCAAGTGTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066504.11 ENSMUST00000121287.8 |
||
| CDS GCA 72 bp | TCTCTGTTCAGAATCAGCAGGCTTTCTAGGAAGTGCTaGAGCCAGCGGATCCCAAGCTTCCTGCAGTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLFRISRLSRKC*SQRIPSFLQSL Trigger: CAAAGACTGCAGGAAGCTTGGGATCCGCTGGCTGCAGCACTTCCTAGAAAGCCTGCTGATTCTGAACAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021208.11 ENSMUST00000108420.9 |
||