Pregenerated sensors for RPGRIP1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033282Ensembl transcript IDs: ENSMUST00000047783.14, ENSMUST00000132757.2, ENSMUST00000139113.8, ENSMUST00000209564.2
Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GCAGTTACTGAGAGCTGCAAGTTCTCCTCCAGGGCTGTGTCTGTGTaGGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCT | + |
Preference number: 1 (lower is better) Translates to: AVTESCKFSSRAVSV*VEPPLPSHPLQSKP Trigger: AGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCCTGGAGGAGAACTTGCAGCTCTCAGTAACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR GCA 90 bp | GCAAGGTCAACATGGGCAACCCCAATGTCCTCACATTCTAGGTCCTaGTCGTCCTCGGGAGGATCACTGACCACGGTGAAGCGCACACTT | + |
Preference number: 1 (lower is better) Translates to: ARSTWATPMSSHSRS*SSSGGSLTTVKRTL Trigger: AAGTGTGCGCTTCACCGTGGTCAGTGATCCTCCCGAGGACGAGCAGGACCTAGAATGTGAGGACATTGGGGTTGCCCATGTTGACCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR GCA 90 bp | AGGCGCTCCTCTACTCTCCTTTCTGAAAACCTCACCGAGTGCAGCTaGTTCTCAAGGCTGCAGCACTTCAGACGCTGCTCCTTAAGCTGC | + |
Preference number: 1 (lower is better) Translates to: RRSSTLLSENLTECS*FSRLQHFRRCSLSC Trigger: GCAGCTTAAGGAGCAGCGTCTGAAGTGCTGCAGCCTTGAGAAGCAGCTGCACTCGGTGAGGTTTTCAGAAAGGAGAGTAGAGGAGCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CCA 90 bp | TTACTGAGAGCTGCAAGTTCTCCTCCAGGGCTGTGTCTGTGTGAGTaGAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTT | + |
Preference number: 1 (lower is better) Translates to: LLRAASSPPGLCLCE*NPHFPAILYRASLV Trigger: AACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCCTGGAGGAGAACTTGCAGCTCTCAGTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR TCA 90 bp | TCAGCATTGATGTCACTCTCCTGGTTGAAGAACTTCAGGCGGCTCTaGAGCTCATGCAGCCGCTGCTTTTGCTGCAGACACTGCAGCTGT | + |
Preference number: 1 (lower is better) Translates to: SALMSLSWLKNFRRL*SSCSRCFCCRHCSC Trigger: ACAGCTGCAGTGTCTGCAGCAAAAGCAGCGGCTGCATGAGCTTCAGAGCCGCCTGAAGTTCTTCAACCAGGAGAGTGACATCAATGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR GCA 90 bp | AGCTGCTTCTCAAGGCTGCAGCACTTCAGACGCTGCTCCTTAAGCTaGTTGTTCAGCTCATCTCCATTGGCCATCAAGGCATCATGGCTG | + |
Preference number: 1 (lower is better) Translates to: SCFSRLQHFRRCSLS*LFSSSPLAIKASWL Trigger: CAGCCATGATGCCTTGATGGCCAATGGAGATGAGCTGAACAAGCAGCTTAAGGAGCAGCGTCTGAAGTGCTGCAGCCTTGAGAAGCAGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR TCA 90 bp | TCATCTGCTGCTCCTTTAACTTCCACTGCTCTTCATGGGCAGCACTaGAGGCGCTCCTCTACTCTCCTTTCTGAAAACCTCACCGAGTGC | + |
Preference number: 1 (lower is better) Translates to: SSAAPLTSTALHGQH*RRSSTLLSENLTEC Trigger: GCACTCGGTGAGGTTTTCAGAAAGGAGAGTAGAGGAGCGCCTTCAGTGCTGCCCATGAAGAGCAGTGGAAGTTAAAGGAGCAGCAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR GCA 90 bp | GTTGCCGTCTGTGGACTCTGCTGGGCTGATCTGAGCAGTTGTGGCTaGTTGCTGACTCGACAATTGCATTTTCTCTGGCTTCTTAAAATT | + |
Preference number: 1 (lower is better) Translates to: VAVCGLCWADLSSCG*LLTRQLHFLWLLKI Trigger: AATTTTAAGAAGCCAGAGAAAATGCAATTGTCGAGTCAGCAAGCAGCCACAACTGCTCAGATCAGCCCAGCAGAGTCCACAGACGGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CCA 90 bp | AGGACAGGGGTGCCCAGTGGTACAGACAGAATTTATAGAGTTCTGTaGTCAGATCATACTCTACTGGTCCCACAGAGTGCGCCAACAAAT | + |
Preference number: 1 (lower is better) Translates to: RTGVPSGTDRIYRVL*SDHTLLVPQSAPTN Trigger: ATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAACTCTATAAATTCTGTCTGTACCACTGGGCACCCCTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR TCA 90 bp | TGCCACCGTCTGTTCGGGCATCGAGAACATCAATATCTTGCTCTATaGTGTCTCTTCCTTTCTGAAACAGGTCAGCAAGGTCAACATGGG | + |
Preference number: 1 (lower is better) Translates to: CHRLFGHREHQYLAL*CLFLSETGQQGQHG Trigger: CCCATGTTGACCTTGCTGACCTGTTTCAGAAAGGAAGAGACATCATAGAGCAAGATATTGATGTTCTCGATGCCCGAACAGACGGTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR GCA 90 bp | TTTTACTGTAACATGAAGTTCATTCAAGTTGCCGTCTGTGGACTCTaGTGGGCTGATCTGAGCAGTTGTGGCTGCTTGCTGACTCGACAA | + |
Preference number: 1 (lower is better) Translates to: FYCNMKFIQVAVCGL*WADLSSCGCLLTRQ Trigger: TTGTCGAGTCAGCAAGCAGCCACAACTGCTCAGATCAGCCCAGCAGAGTCCACAGACGGCAACTTGAATGAACTTCATGTTACAGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CCA 90 bp | ATCCATATTCATCGGCACTGGGAAACACATGTGGTCATCAAACTGTaGGTCATTGCTACTGGGAACGATGGCGGTATCATGGTCTGGAAA | + |
Preference number: 1 (lower is better) Translates to: IHIHRHWETHVVIKL*VIATGNDGGIMVWK Trigger: TTTCCAGACCATGATACCGCCATCGTTCCCAGTAGCAATGACCCACAGTTTGATGACCACATGTGTTTCCCAGTGCCGATGAATATGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR TCA 90 bp | ATCTCTGCCAAGTGCTCTAACTCTTCTATCTGGCCTCTCTGTGACTaGATAACATTTTCCCTCTCCTTGTCTGGCAGCATCCTAATGCAG | + |
Preference number: 1 (lower is better) Translates to: ISAKCSNSSIWPLCD*ITFSLSLSGSILMQ Trigger: CTGCATTAGGATGCTGCCAGACAAGGAGAGGGAAAATGTTATTCAGTCACAGAGAGGCCAGATAGAAGAGTTAGAGCACTTGGCAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR GCA 90 bp | TCATCGGCACTGGGAAACACATGTGGTCATCAAACTGTGGGTCATTaGTACTGGGAACGATGGCGGTATCATGGTCTGGAAAATCAAAAA | + |
Preference number: 1 (lower is better) Translates to: SSALGNTCGHQTVGH*YWERWRYHGLENQK Trigger: TTTTTGATTTTCCAGACCATGATACCGCCATCGTTCCCAGTAGCAATGACCCACAGTTTGATGACCACATGTGTTTCCCAGTGCCGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CCA 90 bp | ATCCTTGAGCTTTCATGCGAGCATTTTCTTAGAAGCGGATGCCTCTaGAACAGGTTCTTTCAGGCCTCCAAGTCCTTTCTATTTTGCTCG | + |
Preference number: 1 (lower is better) Translates to: ILELSCEHFLRSGCL*NRFFQASKSFLFCS Trigger: CGAGCAAAATAGAAAGGACTTGGAGGCCTGAAAGAACCTGTTCCAGAGGCATCCGCTTCTAAGAAAATGCTCGCATGAAAGCTCAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR TCA 90 bp | TTTTGTTGTGGGAACATTGGTGCACGCAGAGTCTCCCAAATCACATaGCCACGTCTCAGCCCACACTTCTTCATGACACATAGAAATTAT | + |
Preference number: 1 (lower is better) Translates to: FCCGNIGARRVSQIT*PRLSPHFFMTHRNY Trigger: ATAATTTCTATGTGTCATGAAGAAGTGTGGGCTGAGACGTGGTCATGTGATTTGGGAGACTCTGCGTGCACCAATGTTCCCACAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR GCA 90 bp | AATCTCATCCTTGAGCTTTCATGCGAGCATTTTCTTAGAAGCGGATaGCTCTGGAACAGGTTCTTTCAGGCCTCCAAGTCCTTTCTATTT | + |
Preference number: 1 (lower is better) Translates to: NLILELSCEHFLRSG*LWNRFFQASKSFLF Trigger: AAATAGAAAGGACTTGGAGGCCTGAAAGAACCTGTTCCAGAGGCATCCGCTTCTAAGAAAATGCTCGCATGAAAGCTCAAGGATGAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CCA 90 bp | AAGCCTCCCAAGGAGGAGTCATCACCGAAGCTGTTGGAGCACAGATaGTTCAGCTATACGCTGATATTCATACTTGCATTTTTGCATTAT | + |
Preference number: 1 (lower is better) Translates to: KPPKEESSPKLLEHR*FSYTLIFILAFLHY Trigger: ATAATGCAAAAATGCAAGTATGAATATCAGCGTATAGCTGAACCATCTGTGCTCCAACAGCTTCGGTGATGACTCCTCCTTGGGAGGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR TCA 90 bp | AGTTCCTGCAGCATGCTTTTCCTTATCCATCAACTCAAATATTCCTaGGATACACTTGTCATGTGCCAGGGAAATCAGAGGCACATTGAC | + |
Preference number: 1 (lower is better) Translates to: SSCSMLFLIHQLKYS*DTLVMCQGNQRHID Trigger: GTCAATGTGCCTCTGATTTCCCTGGCACATGACAAGTGTATCTCAGGAATATTTGAGTTGATGGATAAGGAAAAGCATGCTGCAGGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR TCA 90 bp | GCTCCCTCCCAGCAACCGATGAATTATAGATTACACACATCAGAGTaGTTACTCAAAATCTCATCCTTGAGCTTTCATGCGAGCATTTTC | + |
Preference number: 1 (lower is better) Translates to: APSQQPMNYRLHTSE*LLKISSLSFHASIF Trigger: GAAAATGCTCGCATGAAAGCTCAAGGATGAGATTTTGAGTAATCACTCTGATGTGTGTAATCTATAATTCATCGGTTGCTGGGAGGGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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3UTR TCA 90 bp | CTCTATTTATATTTCCAAACTAAAAGCATTACAGCTCTAGAGTGCTaGGTGTACTGTGCAGTTACTGAGAGCTGCAAGTTCTCCTCCAGG | + |
Preference number: 1 (lower is better) Translates to: LYLYFQTKSITALEC*VYCAVTESCKFSSR Trigger: CCTGGAGGAGAACTTGCAGCTCTCAGTAACTGCACAGTACACTCAGCACTCTAGAGCTGTAATGCTTTTAGTTTGGAAATATAAATAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR TCA 90 bp | CTCCTGGGTATCACTATCATCAAAAACATAGAAACTCAGAGACTCTaGCTTAAGGTAGCGATCCAAATCCATATTCATCGGCACTGGGAA | + |
Preference number: 1 (lower is better) Translates to: LLGITIIKNIETQRL*LKVAIQIHIHRHWE Trigger: TTCCCAGTGCCGATGAATATGGATTTGGATCGCTACCTTAAGTCAGAGTCTCTGAGTTTCTATGTTTTTGATGATAGTGATACCCAGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CCA 90 bp | GTACAGACAGAATTTATAGAGTTCTGTGGTCAGATCATACTCTACTaGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCA | + |
Preference number: 1 (lower is better) Translates to: VQTEFIEFCGQIILY*SHRVRQQINIVRMS Trigger: TGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAACTCTATAAATTCTGTCTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR TCA 90 bp | TTTCTTCTGATGGCTGTTTGGTATTTGTGGAGACAGAACTTGGAATaGTACAGTCATCACTGTCTGAAGCTGATCTGTCTTCATCTTCTG | + |
Preference number: 1 (lower is better) Translates to: FLLMAVWYLWRQNLE*YSHHCLKLICLHLL Trigger: CAGAAGATGAAGACAGATCAGCTTCAGACAGTGATGACTGTATCATTCCAAGTTCTGTCTCCACAAATACCAAACAGCCATCAGAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR GCA 90 bp | ATAGAAAGCGTAGGTACAGAAAGTGACAAGTTCTTTATCACCAGATaGCCGAAGGACTTCAGAAGAAAAGGTGACTTTGTTGATGTGGAT | + |
Preference number: 1 (lower is better) Translates to: IESVGTESDKFFITR*PKDFRRKGDFVDVD Trigger: ATCCACATCAACAAAGTCACCTTTTCTTCTGAAGTCCTTCGGGCATCTGGTGATAAAGAACTTGTCACTTTCTGTACCTACGCTTTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR TCA 90 bp | AGAATCATTAAGGTTCAGAGCTATGATCTCAATCCGAATTTCTTCTaGTGGCTGTTTGGTATTTGTGGAGACAGAACTTGGAATGATACA | + |
Preference number: 1 (lower is better) Translates to: RIIKVQSYDLNPNFF*WLFGICGDRTWNDT Trigger: TGTATCATTCCAAGTTCTGTCTCCACAAATACCAAACAGCCATCAGAAGAAATTCGGATTGAGATCATAGCTCTGAACCTTAATGATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | CTGCTCGTCCTCGGGAGGATCACTGACCACGGTGAAGCGCACACTTCTGTGAGGGGAAGCCACACTTCCTaGGGCAAGCTGGCCCTCAGA | + |
Preference number: 2 (lower is better) Translates to: LLVLGRITDHGEAHTSVRGSHTS*GKLALR Trigger: TCTGAGGGCCAGCTTGCCTCAGGAAGTGTGGCTTCC...CCTCACAGAAGTGTGCGCTTCACCGTGGTCAGTGATCCTCCCGAGGACGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAAACTTCAGGCGGCTCTaGAGCTCATGCAGCCGCTGC | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWINFRRL*SSCSRC Trigger: GCAGCGGCTGCATGAGCTTCAGAGCCGCCTGAAGTT...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATACAGTACCGGGAACGCTaGCAGGAGTCTGAGGCTGAG | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIQYRER*QESEAE Trigger: CTCAGCCTCAGACTCCTGCCAGCGTTCCCGGTACTG...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR TCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCAGTGAGGACACTCACTTaGTCTCTCTCTTCAGAACCC | + |
Preference number: 2 (lower is better) Translates to: GLCLCEWNPHFPAILYRAVRTLT*SLSSEP Trigger: GGGTTCTGAAGAGAGAGATCAAGTGAGTGTCCTCAC...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR GCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAGCCGTCTGTGGACTCTaGTGGGCTGATCTGAGCAGT | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIAVCGL*WADLSS Trigger: ACTGCTCAGATCAGCCCAGCAGAGTCCACAGACGGC...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCACAGATCATACTCTACTaGTCCCACAGAGTGCGCCAA | + |
Preference number: 2 (lower is better) Translates to: GLCLCEWNPHFPAILYRAQIILY*SHRVRQ Trigger: TTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTG...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR CCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATATTCCACTGCTCTTCATaGGCAGCACTGAAGGCGCTC | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIFHCSS*AALKAL Trigger: GAGCGCCTTCAGTGCTGCCCATGAAGAGCAGTGGAA...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | CTGCTCGTCCTCGGGAGGATCACTGACCACGGTGAAGCGCACACTTCTGTGAGGGACTCGGGTGTGATATaGTATCTGCAAAAGAGACCT | + |
Preference number: 2 (lower is better) Translates to: LLVLGRITDHGEAHTSVRDSGVI*YLQKRP Trigger: AGGTCTCTTTTGCAGATACCATATCACACCCGAGTC...CCTCACAGAAGTGTGCGCTTCACCGTGGTCAGTGATCCTCCCGAGGACGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | GAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTTCACAGAGGACATGGAGAGCCTTTGTCTaGAGATGTTTGTGGTCACTG | + |
Preference number: 2 (lower is better) Translates to: EPPLPSHPLQSKPGSQRTWRAFV*RCLWSL Trigger: CAGTGACCACAAACATCTGCAGACAAAGGCTCTCCA...TGTCCTCTGTGAACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR GCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAGAAAACCTCACCGAGTaGAGCTGCTTCTCAAGGCTG | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIENLTE*SCFSRL Trigger: CAGCCTTGAGAAGCAGCTGCACTCGGTGAGGTTTTC...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | GAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTTCACAGAGGACAGTCTGCAGATGTTTGTaGTCACTGGAAGGTTCCAGA | + |
Preference number: 2 (lower is better) Translates to: EPPLPSHPLQSKPGSQRTVCRCL*SLEGSR Trigger: TCTGGAACCTTCCAGTGACCACAAACATCTGCAGAC...TGTCCTCTGTGAACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR CCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAAGAAGCGGATGCCTCTaGAACAGGTTCTTTCAGGCC | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIRSGCL*NRFFQA Trigger: GGCCTGAAAGAACCTGTTCCAGAGGCATCCGCTTCT...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CAA 90 bp | TGCTTCTCAAGGCTGCAGCACTTCAGACGCTGCTCCTTAAGCTGCTaGTTCAGCTCATCTCCATTGGCCATCAAGGCATCATGGCTGATC | + |
Preference number: 2 (lower is better) Translates to: CFSRLQHFRRCSLSC*FSSSPLAIKASWLI Trigger: GATCAGCCATGATGCCTTGATGGCCAATGGAGATGAGCTGAACAAGCAGCTTAAGGAGCAGCGTCTGAAGTGCTGCAGCCTTGAGAAGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCACCTCCCAGCAACCGATaGATTATAGATTACACACAT | + |
Preference number: 2 (lower is better) Translates to: GLCLCEWNPHFPAILYRAPPSNR*IIDYTH Trigger: ATGTGTGTAATCTATAATTCATCGGTTGCTGGGAGG...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR TCA 90 bp | GGCGGCTCTGAAGCTCATGCAGCCGCTGCTTTTGCTGCAGACACTGCAGCTGTATATCTGGCCTCTCTGTaGCTGAATAACATTTTCCCT | + |
Preference number: 2 (lower is better) Translates to: GGSEAHAAAAFAADTAAVYLASL*LNNIFP Trigger: AGGGAAAATGTTATTCAGTCACAGAGAGGCCAGATA...TACAGCTGCAGTGTCTGCAGCAAAAGCAGCGGCTGCATGAGCTTCAGAGCCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | CTGCTCGTCCTCGGGAGGATCACTGACCACGGTGAAGCGCACACTTCTGTGAGGCAACTCAAATATTCCTaGGATACACTTGTCATGTGC | + |
Preference number: 2 (lower is better) Translates to: LLVLGRITDHGEAHTSVRQLKYS*DTLVMC Trigger: GCACATGACAAGTGTATCTCAGGAATATTTGAGTTG...CCTCACAGAAGTGTGCGCTTCACCGTGGTCAGTGATCCTCCCGAGGACGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | GGCGGCTCTGAAGCTCATGCAGCCGCTGCTTTTGCTGCAGACACTGCAGCTGTAATCTGCACTTTCATCTaGTGCTCCTTTAACTTCCAC | + |
Preference number: 2 (lower is better) Translates to: GGSEAHAAAAFAADTAAVICTFI*CSFNFH Trigger: GTGGAAGTTAAAGGAGCAGCAGATGAAAGTGCAGAT...TACAGCTGCAGTGTCTGCAGCAAAAGCAGCGGCTGCATGAGCTTCAGAGCCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | CTCCGGGTAAAGGCCTCGCACTATGGGAGTAGTCTGCAGTTCAAAGTCATAGAATGCAGCCGCTGCTTTTaGTGCAGACACTGCAGCTGT | + |
Preference number: 2 (lower is better) Translates to: LRVKASHYGSSLQFKVIECSRCF*CRHCSC Trigger: ACAGCTGCAGTGTCTGCAGCAAAAGCAGCGGCTGCA...TTCTATGACTTTGAACTGCAGACTACTCCCATAGTGCGAGGCCTTTACCCGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATATCTACAGAGCAAGCCTaGTTCACAGAGGACAGCACA | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWISTEQA*FTEDST Trigger: TGTGCTGTCCTCTGTGAACCAGGCTTGCTCTGTAGA...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR CCA 90 bp | CTGCTCGTCCTCGGGAGGATCACTGACCACGGTGAAGCGCACACTTCTGTGAGGTACTGTGCCAAAATTTaGGATGTCTCCTTTAGTTCC | + |
Preference number: 2 (lower is better) Translates to: LLVLGRITDHGEAHTSVRYCAKI*DVSFSS Trigger: GGAACTAAAGGAGACATCCCAAATTTTGGCACAGTA...CCTCACAGAAGTGTGCGCTTCACCGTGGTCAGTGATCCTCCCGAGGACGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | AGCTGCTTCTCAAGGCTGCAGCACTTCAGACGCTGCTCCTTAAGCTGCTTGTTCAGCATCCTAATGCAGTaGGCCTTGGGAAAACTGCTA | + |
Preference number: 2 (lower is better) Translates to: SCFSRLQHFRRCSLSCLFSILMQ*ALGKLL Trigger: TAGCAGTTTTCCCAAGGCTCACTGCATTAGGATGCT...GAACAAGCAGCTTAAGGAGCAGCGTCTGAAGTGCTGCAGCCTTGAGAAGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | CTGCTCGTCCTCGGGAGGATCACTGACCACGGTGAAGCGCACACTTCTGTGAGGAATCCGAATTTCTTCTaGTGGCTGTTTGGTATTTGT | + |
Preference number: 2 (lower is better) Translates to: LLVLGRITDHGEAHTSVRNPNFF*WLFGIC Trigger: ACAAATACCAAACAGCCATCAGAAGAAATTCGGATT...CCTCACAGAAGTGTGCGCTTCACCGTGGTCAGTGATCCTCCCGAGGACGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAGATACACTTGTCATGTaGCAGGGAAATCAGAGGCAC | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIDTLVM*QGNQRH Trigger: GTGCCTCTGATTTCCCTGGCACATGACAAGTGTATC...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | AGCTGCTTCTCAAGGCTGCAGCACTTCAGACGCTGCTCCTTAAGCTGCTTGTTCGCCATCAAGGCATCATaGCTGATCCTGAGTGTTCTT | + |
Preference number: 2 (lower is better) Translates to: SCFSRLQHFRRCSLSCLFAIKAS*LILSVL Trigger: AAGAACACTCAGGATCAGCCATGATGCCTTGATGGC...GAACAAGCAGCTTAAGGAGCAGCGTCTGAAGTGCTGCAGCCTTGAGAAGCAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CAA 90 bp | CACTTCAGACGCTGCTCCTTAAGCTGCTTGTTCAGCTCATCTCCATaGGCCATCAAGGCATCATGGCTGATCCTGAGTGTTCTTTGCTTC | + |
Preference number: 2 (lower is better) Translates to: HFRRCSLSCLFSSSP*AIKASWLILSVLCF Trigger: GAAGCAAAGAACACTCAGGATCAGCCATGATGCCTTGATGGCCAATGGAGATGAGCTGAACAAGCAGCTTAAGGAGCAGCGTCTGAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CAA 90 bp | GCCGATGGTGCCACCGTCTGTTCGGGCATCGAGAACATCAATATCTaGCTCTATGATGTCTCTTCCTTTCTGAAACAGGTCAGCAAGGTC | + |
Preference number: 2 (lower is better) Translates to: ADGATVCSGIENINI*LYDVSSFLKQVSKV Trigger: GACCTTGCTGACCTGTTTCAGAAAGGAAGAGACATCATAGAGCAAGATATTGATGTTCTCGATGCCCGAACAGACGGTGGCACCATCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAACGTGGACCAGATACTaGGAAGTGAAGTTATACTCC | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWITWTRY*EVKLYS Trigger: GGAGTATAACTTCACTTCTCAGTATCTGGTCCACGT...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAGAAACTCAGAGACTCTaGCTTAAGGTAGCGATCCAA | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIETQRL*LKVAIQ Trigger: TTGGATCGCTACCTTAAGTCAGAGTCTCTGAGTTTC...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAAGGATACGCAACAGCTaGCAGACCATTTTCTGGTTT | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIRIRNS*QTIFWF Trigger: AAACCAGAAAATGGTCTGTCAGCTGTTGCGTATCCT...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CAA 90 bp | TCTCAACTGACACGCTGCAATTGTTTCGTAATCTGTGCTGTGGGCTaGGTGGAGCTCCAGCGTGACAGTGTTCTTCTGAATGTACTGCAA | + |
Preference number: 2 (lower is better) Translates to: SQLTRCNCFVICAVG*VELQRDSVLLNVLQ Trigger: TTGCAGTACATTCAGAAGAACACTGTCACGCTGGAGCTCCACCAAGCCCACAGCACAGATTACGAAACAATTGCAGCGTGTCAGTTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAATGGAGATGGCAGGCCTaGGGACAGGGGTGCCCAGTG | + |
Preference number: 2 (lower is better) Translates to: NIMGLNDTVAAQSQRKLEWRWQA*GQGCPV Trigger: CACTGGGCACCCCTGTCCTCAGGCCTGCCATCTCCA...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR TCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATATCTTTTCTCTTCAACTaGGTTTTCAGGATCTCTGCC | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWISFLFN*VFRISA Trigger: GGCAGAGATCCTGAAAACTCAGTTGAAGAGAAAAGA...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | AAGTCTCGGGACTCGGGTGTGATATGGTATCTGCAAAAGAGACCTTTTTGTCCAGGTGGAGCTCCAGCGTaGCAGTGTTCTTCTGAATGT | + |
Preference number: 2 (lower is better) Translates to: KSRDSGVIWYLQKRPFCPGGAPA*QCSSEC Trigger: ACATTCAGAAGAACACTGTCACGCTGGAGCTCCACC...TGGACAAAAAGGTCTCTTTTGCAGATACCATATCACACCCGAGTCCCGAGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | GAGATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTATCTGCTGGGCTGATCTaGGCAGTTGTGGCTGCTTGC | + |
Preference number: 2 (lower is better) Translates to: EMSSSFPCCISPTFSSTLSAGLI*AVVAAC Trigger: GCAAGCAGCCACAACTGCTCAGATCAGCCCAGCAGA...TAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | TTAAGATGTCTCTCACCGCTGGGTTGTTTTCTTTATCCAGGTAGATCACATTGGTGGACTCTGCTGGGCTaGTCTGAGCAGTTGTGGCTG | + |
Preference number: 2 (lower is better) Translates to: LRCLSPLGCFLYPGRSHWWTLLG*SEQLWL Trigger: CAGCCACAACTGCTCAGATCAGCCCAGCAGAGTCCA...CCAATGTGATCTACCTGGATAAAGAAAACAACCCAGCGGTGAGAGACATCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | TGGGAACTCTTAATCGGAACCAGTATTCTACTGTGCCAAAATTTGGGATGTCTCTCTGTGCTGTGGGCTTaGTGGAGCTCCAGCGTGACA | + |
Preference number: 2 (lower is better) Translates to: WELLIGTSILLCQNLGCLSVLWA*WSSSVT Trigger: TGTCACGCTGGAGCTCCACCAAGCCCACAGCACAGA...GAGACATCCCAAATTTTGGCACAGTAGAATACTGGTTCCGATTAAGAGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | TTAAGATGTCTCTCACCGCTGGGTTGTTTTCTTTATCCAGGTAGATCACATTGGAGCTCATGCAGCCGCTaGTTTTGCTGCAGACACTGC | + |
Preference number: 2 (lower is better) Translates to: LRCLSPLGCFLYPGRSHWSSCSR*FCCRHC Trigger: GCAGTGTCTGCAGCAAAAGCAGCGGCTGCATGAGCT...CCAATGTGATCTACCTGGATAAAGAAAACAACCCAGCGGTGAGAGACATCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATATTCTTGTACTGTTTCTaGATGAGTTGCTTGAAGCTC | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIFLYCF*MSCLKL Trigger: GAGCTTCAAGCAACTCATGCAGAAACAGTACAAGAA...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAGTGGTAACAAATGAATaGCAGGAACAGCAGAATTTC | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIVVTNE*QEQQNF Trigger: GAAATTCTGCTGTTCCTGCCATTCATTTGTTACCAC...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR CCA 90 bp | AAGTCTCGGGACTCGGGTGTGATATGGTATCTGCAAAAGAGACCTTTTTGTCCATTCCCTCTCCTTGTCTaGCAGCATCCTAATGCAGTG | + |
Preference number: 2 (lower is better) Translates to: KSRDSGVIWYLQKRPFCPFPLLV*QHPNAV Trigger: CACTGCATTAGGATGCTGCCAGACAAGGAGAGGGAA...TGGACAAAAAGGTCTCTTTTGCAGATACCATATCACACCCGAGTCCCGAGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CAA 90 bp | GATGTCATTTCAAAGCCTCCCAAGGAGGAGTCATCACCGAAGCTGTaGGAGCACAGATGGTTCAGCTATACGCTGATATTCATACTTGCA | + |
Preference number: 2 (lower is better) Translates to: DVISKPPKEESSPKL*EHRWFSYTLIFILA Trigger: TGCAAGTATGAATATCAGCGTATAGCTGAACCATCTGTGCTCCAACAGCTTCGGTGATGACTCCTCCTTGGGAGGCTTTGAAATGACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR CAA 90 bp | TTCATCGGCACTGGGAAACACATGTGGTCATCAAACTGTGGGTCATaGCTACTGGGAACGATGGCGGTATCATGGTCTGGAAAATCAAAA | + |
Preference number: 2 (lower is better) Translates to: FIGTGKHMWSSNCGS*LLGTMAVSWSGKSK Trigger: TTTTGATTTTCCAGACCATGATACCGCCATCGTTCCCAGTAGCAATGACCCACAGTTTGATGACCACATGTGTTTCCCAGTGCCGATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | ATATCCTTTAACTGGGCTTCAAGCTTTTGGATGCGTGCAGCCCTGATATCGAGATGGCCTCTCTGTGACTaGATAACATTTTCCCTCTCC | + |
Preference number: 2 (lower is better) Translates to: ISFNWASSFWMRAALISRWPLCD*ITFSLS Trigger: GGAGAGGGAAAATGTTATTCAGTCACAGAGAGGCCA...TCTCGATATCAGGGCTGCACGCATCCAAAAGCTTGAAGCCCAGTTAAAGGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | GATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCCTCTACTCTCCTTTCTaGAAACCTCACCGAGTGCAG | + |
Preference number: 2 (lower is better) Translates to: DVVFFPLLHFPHIFFYLSLYSPF*KPHRVQ Trigger: CTGCACTCGGTGAGGTTTTCAGAAAGGAGAGTAGAG...GCTAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATACTGATATCGAGAAGATaGACATATTGTTCCACTTTG | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWILISRR*TYCSTL Trigger: CAAAGTGGAACAATATGTTCATCTTCTCGATATCAG...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | GATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCCGCTGCTCCTTAAGCTaGTTGTTCAGCTCATCTCCA | + |
Preference number: 2 (lower is better) Translates to: DVVFFPLLHFPHIFFYLSRCSLS*LFSSSP Trigger: TGGAGATGAGCTGAACAAGCAGCTTAAGGAGCAGCG...GCTAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | ATATCCTTTAACTGGGCTTCAAGCTTTTGGATGCGTGCAGCCCTGATATCGAGATCCTTTAACTTCCACTaGTCTTCATGGGCAGCACTG | + |
Preference number: 2 (lower is better) Translates to: ISFNWASSFWMRAALISRSFNFH*SSWAAL Trigger: CAGTGCTGCCCATGAAGAGCAGTGGAAGTTAAAGGA...TCTCGATATCAGGGCTGCACGCATCCAAAAGCTTGAAGCCCAGTTAAAGGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | AAGTCTCGGGACTCGGGTGTGATATGGTATCTGCAAAAGAGACCTTTTTGTCCAAAGCTTTTGGATGCGTaGAGCCCTGATATCGAGAAG | + |
Preference number: 2 (lower is better) Translates to: KSRDSGVIWYLQKRPFCPKLLDA*SPDIEK Trigger: CTTCTCGATATCAGGGCTGCACGCATCCAAAAGCTT...TGGACAAAAAGGTCTCTTTTGCAGATACCATATCACACCCGAGTCCCGAGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATCACCGAAGCTGTTaGAGCACAGATGGTTCAGCT | + |
Preference number: 2 (lower is better) Translates to: SYSTGPTECANKLISYGCHHRSC*STDGSA Trigger: AGCTGAACCATCTGTGCTCCAACAGCTTCGGTGATG...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR CCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATACATTTCAATATAACTTaGATAGTTCCTGCAGCATGC | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIHFNIT*IVPAAC Trigger: GCATGCTGCAGGAACTATCCAAGTTATATTGAAATG...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | CTCCGGGTAAAGGCCTCGCACTATGGGAGTAGTCTGCAGTTCAAAGTCATAGAAATTCCTTTGCAGCACTaGTTCACAGCTCCATTAAAA | + |
Preference number: 2 (lower is better) Translates to: LRVKASHYGSSLQFKVIEIPLQH*FTAPLK Trigger: TTTTAATGGAGCTGTGAATCAGTGCTGCAAAGGAAT...TTCTATGACTTTGAACTGCAGACTACTCCCATAGTGCGAGGCCTTTACCCGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | TTAAGATGTCTCTCACCGCTGGGTTGTTTTCTTTATCCAGGTAGATCACATTGGGGATGCGTGCAGCCCTaGTATCGAGAAGATGAACAT | + |
Preference number: 2 (lower is better) Translates to: LRCLSPLGCFLYPGRSHWGCVQP*YREDEH Trigger: ATGTTCATCTTCTCGATATCAGGGCTGCACGCATCC...CCAATGTGATCTACCTGGATAAAGAAAACAACCCAGCGGTGAGAGACATCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAGCTGTTTTAAATTACTaGAGGGAATATTATGGGTCT | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIAVLNY*REYYGS Trigger: AGACCCATAATATTCCCTGCAGTAATTTAAAACAGC...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR GCA 90 bp | AAGTCTCGGGACTCGGGTGTGATATGGTATCTGCAAAAGAGACCTTTTTGTCCAAGGATCTCTGCCAAGTaGTCTAACTCTTCTATCTGG | + |
Preference number: 2 (lower is better) Translates to: KSRDSGVIWYLQKRPFCPRISAK*SNSSIW Trigger: CCAGATAGAAGAGTTAGAGCACTTGGCAGAGATCCT...TGGACAAAAAGGTCTCTTTTGCAGATACCATATCACACCCGAGTCCCGAGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAAGAACATCAATATCTTaGTCTATGATGTCTCTTCCT | + |
Preference number: 2 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIRTSIS*SMMSLP Trigger: AGGAAGAGACATCATAGAGCAAGATATTGATGTTCT...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | GAGATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGTGGGTCATTGCTACTaGGAACGATGGCGGTATCAT | + |
Preference number: 2 (lower is better) Translates to: EMSSSFPCCISPTFSSTLVGHCY*ERWRYH Trigger: ATGATACCGCCATCGTTCCCAGTAGCAATGACCCAC...TAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | AAGTCTCGGGACTCGGGTGTGATATGGTATCTGCAAAAGAGACCTTTTTGTCCACATATTCATCGGCACTaGGAAACACATGTGGTCATC | + |
Preference number: 2 (lower is better) Translates to: KSRDSGVIWYLQKRPFCPHIHRH*ETHVVI Trigger: GATGACCACATGTGTTTCCCAGTGCCGATGAATATG...TGGACAAAAAGGTCTCTTTTGCAGATACCATATCACACCCGAGTCCCGAGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | ATATCCTTTAACTGGGCTTCAAGCTTTTGGATGCGTGCAGCCCTGATATCGAGACCTCCCAGCAACCGATaGATTATAGATTACACACAT | + |
Preference number: 2 (lower is better) Translates to: ISFNWASSFWMRAALISRPPSNR*IIDYTH Trigger: ATGTGTGTAATCTATAATTCATCGGTTGCTGGGAGG...TCTCGATATCAGGGCTGCACGCATCCAAAAGCTTGAAGCCCAGTTAAAGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | GATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCATTGTCCCGAATATTTaGCCTCTGATCTGTAGCCTG | + |
Preference number: 2 (lower is better) Translates to: DVVFFPLLHFPHIFFYLSIVPNI*PLICSL Trigger: CAGGCTACAGATCAGAGGTCAAATATTCGGGACAAT...GCTAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCAGAGACAATTCCTTTaGAGCACTGATTCACAGCTC | + |
Preference number: 2 (lower is better) Translates to: SYSTGPTECANKLISYGCQRQFL*STDSQL Trigger: GAGCTGTGAATCAGTGCTGCAAAGGAATTGTCTCTG...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR GCA 90 bp | GATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCCAGAGACAATTCCTTTaGAGCACTGATTCACAGCTC | + |
Preference number: 2 (lower is better) Translates to: DVVFFPLLHFPHIFFYLSQRQFL*STDSQL Trigger: GAGCTGTGAATCAGTGCTGCAAAGGAATTGTCTCTG...GCTAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGATGCTTTCTGAGGGTCTaGATATCCAGATACATCCCA | + |
Preference number: 2 (lower is better) Translates to: ERWQESEAENFKASRYKRCFLRV*ISRYIP Trigger: TGGGATGTATCTGGATATCCAGACCCTCAGAAAGCA...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR CCA 90 bp | TTAAGATGTCTCTCACCGCTGGGTTGTTTTCTTTATCCAGGTAGATCACATTGGGTGGTCATCAAACTGTaGGTCATTGCTACTGGGAAC | + |
Preference number: 2 (lower is better) Translates to: LRCLSPLGCFLYPGRSHWVVIKL*VIATGN Trigger: GTTCCCAGTAGCAATGACCCACAGTTTGATGACCAC...CCAATGTGATCTACCTGGATAAAGAAAACAACCCAGCGGTGAGAGACATCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | GATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCACTGGGAAACACATGTaGTCATCAAACTGTGGGTCA | + |
Preference number: 2 (lower is better) Translates to: DVVFFPLLHFPHIFFYLSTGKHM*SSNCGS Trigger: TGACCCACAGTTTGATGACCACATGTGTTTCCCAGT...GCTAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGACCTGTTTGCAAACAGTaGAAACCCACAGCCTATAAA | + |
Preference number: 2 (lower is better) Translates to: ERWQESEAENFKASRYKRPVCKQ*KPTAYK Trigger: TTTATAGGCTGTGGGTTTTCACTGTTTGCAAACAGG...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR TCA 90 bp | TTAAGATGTCTCTCACCGCTGGGTTGTTTTCTTTATCCAGGTAGATCACATTGGTGCTGTTCTCGAAGCTaGAGAAGAGATAGCTCGATT | + |
Preference number: 2 (lower is better) Translates to: LRCLSPLGCFLYPGRSHWCCSRS*RRDSSI Trigger: AATCGAGCTATCTCTTCTTCAGCTTCGAGAACAGCA...CCAATGTGATCTACCTGGATAAAGAAAACAACCCAGCGGTGAGAGACATCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | TGGGAACTCTTAATCGGAACCAGTATTCTACTGTGCCAAAATTTGGGATGTCTCTGCACTTTCATCTGCTaGTCCTTTAACTTCCACTGC | + |
Preference number: 2 (lower is better) Translates to: WELLIGTSILLCQNLGCLCTFIC*SFNFHC Trigger: GCAGTGGAAGTTAAAGGAGCAGCAGATGAAAGTGCA...GAGACATCCCAAATTTTGGCACAGTAGAATACTGGTTCCGATTAAGAGTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | GATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCTTCTTTATCACCAGATaGCCGAAGGACTTCAGAAGA | + |
Preference number: 2 (lower is better) Translates to: DVVFFPLLHFPHIFFYLSFFITR*PKDFRR Trigger: TCTTCTGAAGTCCTTCGGGCATCTGGTGATAAAGAA...GCTAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR GCA 90 bp | GAGATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTACCTCTGGTTCTTCTCTaGAAACGAACTTTCCAAGGT | + |
Preference number: 2 (lower is better) Translates to: EMSSSFPCCISPTFSSTLPLVLL*KRTFQG Trigger: ACCTTGGAAAGTTCGTTTGCAGAGAAGAACCAGAGG...TAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR CCA 90 bp | TGGGAACTCTTAATCGGAACCAGTATTCTACTGTGCCAAAATTTGGGATGTCTCTGCTTTCTGAGGGTCTaGATATCCAGATACATCCCA | + |
Preference number: 2 (lower is better) Translates to: WELLIGTSILLCQNLGCLCFLRV*ISRYIP Trigger: TGGGATGTATCTGGATATCCAGACCCTCAGAAAGCA...GAGACATCCCAAATTTTGGCACAGTAGAATACTGGTTCCGATTAAGAGTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR CCA 90 bp | TTAAGATGTCTCTCACCGCTGGGTTGTTTTCTTTATCCAGGTAGATCACATTGGTCTCTGAACAGCCTCTaGTTCTTCTCTGCAAACGAA | + |
Preference number: 2 (lower is better) Translates to: LRCLSPLGCFLYPGRSHWSLNSL*FFSANE Trigger: TTCGTTTGCAGAGAAGAACCAGAGGCTGTTCAGAGA...CCAATGTGATCTACCTGGATAAAGAAAACAACCCAGCGGTGAGAGACATCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR CAA 90 bp | TCTTTATCACCAGATGCCCGAAGGACTTCAGAAGAAAAGGTGACTTaGTTGATGTGGATTTCAAAGAGATTTTCTCCTCGTTCTAGGTGG | + |
Preference number: 2 (lower is better) Translates to: SLSPDARRTSEEKVT*LMWISKRFSPRSRW Trigger: CCACCTAGAACGAGGAGAAAATCTCTTTGAAATCCACATCAACAAAGTCACCTTTTCTTCTGAAGTCCTTCGGGCATCTGGTGATAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR CAA 90 bp | GCATGCTTTTCCTTATCCATCAACTCAAATATTCCTGAGATACACTaGTCATGTGCCAGGGAAATCAGAGGCACATTGACTTTTCCCATG | + |
Preference number: 2 (lower is better) Translates to: ACFSLSINSNIPEIH*SCAREIRGTLTFPM Trigger: CATGGGAAAAGTCAATGTGCCTCTGATTTCCCTGGCACATGACAAGTGTATCTCAGGAATATTTGAGTTGATGGATAAGGAAAAGCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR CAA 90 bp | CCGGCACTCAATGAAGAGTCGCTGAATAGTATCCTCCCTGGTTATTaGAGAATCATTAAGGTTCAGAGCTATGATCTCAATCCGAATTTC | + |
Preference number: 2 (lower is better) Translates to: PALNEESLNSILPGY*RIIKVQSYDLNPNF Trigger: GAAATTCGGATTGAGATCATAGCTCTGAACCTTAATGATTCTCAAATAACCAGGGAGGATACTATTCAGCGACTCTTCATTGAGTGCCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR TCA 90 bp | ATATCCTTTAACTGGGCTTCAAGCTTTTGGATGCGTGCAGCCCTGATATCGAGATTACACACATCAGAGTaGTTACTCAAAATCTCATCC | + |
Preference number: 2 (lower is better) Translates to: ISFNWASSFWMRAALISRLHTSE*LLKISS Trigger: GGATGAGATTTTGAGTAATCACTCTGATGTGTGTAA...TCTCGATATCAGGGCTGCACGCATCCAAAAGCTTGAAGCCCAGTTAAAGGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR TCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGAATTCCTTTGCAGCACTaGTTCACAGCTCCATTAAAA | + |
Preference number: 2 (lower is better) Translates to: ERWQESEAENFKASRYKRIPLQH*FTAPLK Trigger: TTTTAATGGAGCTGTGAATCAGTGCTGCAAAGGAAT...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR-3UTR TCA 90 bp | GAGATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTACCTGTTTGCAAACAGTaGAAACCCACAGCCTATAAA | + |
Preference number: 2 (lower is better) Translates to: EMSSSFPCCISPTFSSTLPVCKQ*KPTAYK Trigger: TTTATAGGCTGTGGGTTTTCACTGTTTGCAAACAGG...TAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR TCA 90 bp | AAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCAAGGAGGAGTCATCACCTGCTTTTCCCCCTGTTaGACTGTAATGAATTGTCTC | + |
Preference number: 2 (lower is better) Translates to: KLISYGCHFKASQGGVITCFSPC*TVMNCL Trigger: GAGACAATTCATTACAGTTCAACAGGGGGAAAAGCA...GGTGATGACTCCTCCTTGGGAGGCTTTGAAATGACATCCGTACGATATTAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR-3UTR TCA 90 bp | GAGATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCAAAAATAAGTCATTaGCGTGGACCAGATACTGAG | + |
Preference number: 2 (lower is better) Translates to: EMSSSFPCCISPTFSSTLAKISH*RGPDTE Trigger: CTCAGTATCTGGTCCACGTCAATGACTTATTTTTGC...TAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR GCA 90 bp | AAGTCTCGGGACTCGGGTGTGATATGGTATCTGCAAAAGAGACCTTTTTGTCCAGCAAATGCAAATAGATaGTTCATGCTATCATGTTGC | + |
Preference number: 2 (lower is better) Translates to: KSRDSGVIWYLQKRPFCPANANR*FMLSCC Trigger: GCAACATGATAGCATGAAGCATCTATTTGCATTTGC...TGGACAAAAAGGTCTCTTTTGCAGATACCATATCACACCCGAGTCCCGAGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR TCA 90 bp | TTCTGTGGTCAGATCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATGGTTCAGCTATACGCTaGTATTCATACTTGCATTTT | + |
Preference number: 2 (lower is better) Translates to: FCGQIILYWSHRVRQQINGSAIR*YSYLHF Trigger: AAAATGCAAGTATGAATATCAGCGTATAGCTGAACC...ATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR-3UTR TCA 90 bp | GATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCTTTTCCTTCTATGACTaGAAGAGCATTGCTTTTCTC | + |
Preference number: 2 (lower is better) Translates to: DVVFFPLLHFPHIFFYLSFSFYD*KSIAFL Trigger: GAGAAAAGCAATGCTCTTTCAGTCATAGAAGGAAAA...GCTAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | AAACAAAATAGGACTGGGAGTAACTTAATAAGTTGGTGCCAAGTCTCCTTCTTTAAGGCAGTTTCGAGCTaGGCAATCTGCACTTTCATC | + |
Preference number: 2 (lower is better) Translates to: KQNRTGSNLISWCQVSFFKAVSS*AICTFI Trigger: GATGAAAGTGCAGATTGCTCAGCTCGAAACTGCCTT...AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACTCCCAGTCCTATTTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR GCA 90 bp | GAGATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAATAGTTCCTGCAGCATaGTTTTCCTTATCCATCAAC | + |
Preference number: 2 (lower is better) Translates to: EMSSSFPCCISPTFSSTLIVPAA*FSLSIN Trigger: GTTGATGGATAAGGAAAAGCATGCTGCAGGAACTAT...TAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR CCA 90 bp | GATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCCTTGAAGCTCTTTCATaGATCGGTCTAGATCTTTAT | + |
Preference number: 2 (lower is better) Translates to: DVVFFPLLHFPHIFFYLSLEALS*IGLDLY Trigger: ATAAAGATCTAGACCGATCCATGAAAGAGCTTCAAG...GCTAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | TGGGAACTCTTAATCGGAACCAGTATTCTACTGTGCCAAAATTTGGGATGTCTCGCAATATCCTTTAACTaGGCTTCAAGCTTTTGGATG | + |
Preference number: 2 (lower is better) Translates to: WELLIGTSILLCQNLGCLAISFN*ASSFWM Trigger: CATCCAAAAGCTTGAAGCCCAGTTAAAGGATATTGC...GAGACATCCCAAATTTTGGCACAGTAGAATACTGGTTCCGATTAAGAGTTCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CCA 90 bp | GAGATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTATCTCCTCGTTCTAGGTaGATGGTTTCATCAAATTCA | + |
Preference number: 2 (lower is better) Translates to: EMSSSFPCCISPTFSSTLSPRSR*MVSSNS Trigger: TGAATTTGATGAAACCATCCACCTAGAACGAGGAGA...TAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | GAGATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTACATTTTACTGTAACATaGAGTTCATTCAAGTTGCCG | + |
Preference number: 2 (lower is better) Translates to: EMSSSFPCCISPTFSSTLHFTVT*SSFKLP Trigger: CGGCAACTTGAATGAACTTCATGTTACAGTAAAATG...TAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR TCA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTGCATCAAAAATGCACTaGTACCACATAACCTGGAAC | + |
Preference number: 2 (lower is better) Translates to: LFLSTASHDSGWEFDISTASKMH*YHITWN Trigger: GTTCCAGGTTATGTGGTATCAGTGCATTTTTGATGC...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR CCA 90 bp | AAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCAAGGAGGAGTCATCACCAGTAACTTAATAAGTTaGTGCCAAGTCTCCTTCTTT | + |
Preference number: 2 (lower is better) Translates to: KLISYGCHFKASQGGVITSNLIS*CQVSFF Trigger: AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACT...GGTGATGACTCCTCCTTGGGAGGCTTTGAAATGACATCCGTACGATATTAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR TCA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAATTACACACATCAGAGTaGTTACTCAAAATCTCATCC | + |
Preference number: 2 (lower is better) Translates to: NIMGLNDTVAAQSQRKLELHTSE*LLKISS Trigger: GGATGAGATTTTGAGTAATCACTCTGATGTGTGTAA...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR GCA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTGCAAATGCAAATAGATaGTTCATGCTATCATGTTGC | + |
Preference number: 2 (lower is better) Translates to: LFLSTASHDSGWEFDISTANANR*FMLSCC Trigger: GCAACATGATAGCATGAAGCATCTATTTGCATTTGC...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR CAA 90 bp | CTGCTCGTCCTCGGGAGGATCACTGACCACGGTGAAGCGCACACTTCTGTGAGGGCCACACCGCTTTCCTaGGAAGGATACGCAACAGCT | + |
Preference number: 3 (lower is better) Translates to: LLVLGRITDHGEAHTSVRATPLS*EGYATA Trigger: AGCTGTTGCGTATCCTTCCAAGGAAAGCGGTGTGGC...CCTCACAGAAGTGTGCGCTTCACCGTGGTCAGTGATCCTCCCGAGGACGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CCA 72 bp | GCTGCAAGTTCTCCTCCAGGGCTGTGTCTGTGTGAGTaGAACCCCCACTTCCCAGCCATCCTCTACAGAGCA | + |
Preference number: 3 (lower is better) Translates to: AASSPPGLCLCE*NPHFPAILYRA Trigger: TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCCTGGAGGAGAACTTGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR GCA 72 bp | ACATGGGCAACCCCAATGTCCTCACATTCTAGGTCCTaGTCGTCCTCGGGAGGATCACTGACCACGGTGAAG | + |
Preference number: 3 (lower is better) Translates to: TWATPMSSHSRS*SSSGGSLTTVK Trigger: CTTCACCGTGGTCAGTGATCCTCCCGAGGACGAGCAGGACCTAGAATGTGAGGACATTGGGGTTGCCCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CAA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATATGTCCACTCTGGGGTTaGGGCAGGGACATAGGAGTC | + |
Preference number: 3 (lower is better) Translates to: PLRSTEVLWGGSHGEDWICPLWG*GRDIGV Trigger: GACTCCTATGTCCCTGCCCAAACCCCAGAGTGGACA...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR GCA 72 bp | CGCTCCTCTACTCTCCTTTCTGAAAACCTCACCGAGTaGAGCTGCTTCTCAAGGCTGCAGCACTTCAGACGC | + |
Preference number: 3 (lower is better) Translates to: RSSTLLSENLTE*SCFSRLQHFRR Trigger: GCGTCTGAAGTGCTGCAGCCTTGAGAAGCAGCTGCACTCGGTGAGGTTTTCAGAAAGGAGAGTAGAGGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR GCA 72 bp | GTAGGGCATGAAGTGCTTCCACAGTCACCTTCAGTTTaGCGATGGTGCCACCGTCTGTTCGGGCATCGAGAA | + |
Preference number: 3 (lower is better) Translates to: VGHEVLPQSPSV*RWCHRLFGHRE Trigger: TTCTCGATGCCCGAACAGACGGTGGCACCATCGGCAAACTGAAGGTGACTGTGGAAGCACTTCATGCCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR TCA 72 bp | ATGTCACTCTCCTGGTTGAAGAACTTCAGGCGGCTCTaGAGCTCATGCAGCCGCTGCTTTTGCTGCAGACAC | + |
Preference number: 3 (lower is better) Translates to: MSLSWLKNFRRL*SSCSRCFCCRH Trigger: GTGTCTGCAGCAAAAGCAGCGGCTGCATGAGCTTCAGAGCCGCCTGAAGTTCTTCAACCAGGAGAGTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR GCA 72 bp | TCTACTCTCCTTTCTGAAAACCTCACCGAGTGCAGCTaGTTCTCAAGGCTGCAGCACTTCAGACGCTGCTCC | + |
Preference number: 3 (lower is better) Translates to: STLLSENLTECS*FSRLQHFRRCS Trigger: GGAGCAGCGTCTGAAGTGCTGCAGCCTTGAGAAGCAGCTGCACTCGGTGAGGTTTTCAGAAAGGAGAGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR TCA 72 bp | GGAGGATCACTGACCACGGTGAAGCGCACACTTCTGTaGGGCAGTTCTCGCCTTTGCAGTATGGCTTTTAAG | + |
Preference number: 3 (lower is better) Translates to: GGSLTTVKRTLL*GSSRLCSMAFK Trigger: CTTAAAAGCCATACTGCAAAGGCGAGAACTGCCTCACAGAAGTGTGCGCTTCACCGTGGTCAGTGATCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CCA 72 bp | CATGAAGTGCTTCCACAGTCACCTTCAGTTTGCCGATaGTGCCACCGTCTGTTCGGGCATCGAGAACATCAA | + |
Preference number: 3 (lower is better) Translates to: HEVLPQSPSVCR*CHRLFGHREHQ Trigger: TTGATGTTCTCGATGCCCGAACAGACGGTGGCACCATCGGCAAACTGAAGGTGACTGTGGAAGCACTTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CAA 90 bp | CTCCGGGTAAAGGCCTCGCACTATGGGAGTAGTCTGCAGTTCAAAGTCATAGAACTGGGCTTCAAGCTTTaGGATGCGTGCAGCCCTGAT | + |
Preference number: 3 (lower is better) Translates to: LRVKASHYGSSLQFKVIELGFKL*DACSPD Trigger: ATCAGGGCTGCACGCATCCAAAAGCTTGAAGCCCAG...TTCTATGACTTTGAACTGCAGACTACTCCCATAGTGCGAGGCCTTTACCCGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CAA 90 bp | AAGTCTCGGGACTCGGGTGTGATATGGTATCTGCAAAAGAGACCTTTTTGTCCAATCTGTGCTGTGGGCTaGGTGGAGCTCCAGCGTGAC | + |
Preference number: 3 (lower is better) Translates to: KSRDSGVIWYLQKRPFCPICAVG*VELQRD Trigger: GTCACGCTGGAGCTCCACCAAGCCCACAGCACAGAT...TGGACAAAAAGGTCTCTTTTGCAGATACCATATCACACCCGAGTCCCGAGACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CAA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAACATTTTCCCTCTCCTaGTCTGGCAGCATCCTAATG | + |
Preference number: 3 (lower is better) Translates to: PLRSTEVLWGGSHGEDWITFSLS*SGSILM Trigger: CATTAGGATGCTGCCAGACAAGGAGAGGGAAAATGT...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR TCA 72 bp | TACAGCTCTAGAGTGCTGAGTGTACTGTGCAGTTACTaGGAGCTGCAAGTTCTCCTCCAGGGCTGTGTCTGT | + |
Preference number: 3 (lower is better) Translates to: YSSRVLSVLCSY*ELQVLLQGCVC Trigger: ACAGACACAGCCCTGGAGGAGAACTTGCAGCTCTCAGTAACTGCACAGTACACTCAGCACTCTAGAGCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR TCA 72 bp | GGGAACATTGGTGCACGCAGAGTCTCCCAAATCACATaGCCACGTCTCAGCCCACACTTCTTCATGACACAT | + |
Preference number: 3 (lower is better) Translates to: GNIGARRVSQIT*PRLSPHFFMTH Trigger: ATGTGTCATGAAGAAGTGTGGGCTGAGACGTGGTCATGTGATTTGGGAGACTCTGCGTGCACCAATGTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR TCA 72 bp | CGGGACTGGAGGCCGGTGCAGCATTTTACTGTAACATaGAGTTCATTCAAGTTGCCGTCTGTGGACTCTGCT | + |
Preference number: 3 (lower is better) Translates to: RDWRPVQHFTVT*SSFKLPSVDSA Trigger: AGCAGAGTCCACAGACGGCAACTTGAATGAACTTCATGTTACAGTAAAATGCTGCACCGGCCTCCAGTCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR CCA 72 bp | CATCGGCACTGGGAAACACATGTGGTCATCAAACTGTaGGTCATTGCTACTGGGAACGATGGCGGTATCATG | + |
Preference number: 3 (lower is better) Translates to: HRHWETHVVIKL*VIATGNDGGIM Trigger: CATGATACCGCCATCGTTCCCAGTAGCAATGACCCACAGTTTGATGACCACATGTGTTTCCCAGTGCCGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR GCA 72 bp | CTGGGAAACACATGTGGTCATCAAACTGTGGGTCATTaGTACTGGGAACGATGGCGGTATCATGGTCTGGAA | + |
Preference number: 3 (lower is better) Translates to: LGNTCGHQTVGH*YWERWRYHGLE Trigger: TTCCAGACCATGATACCGCCATCGTTCCCAGTAGCAATGACCCACAGTTTGATGACCACATGTGTTTCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR GCA 72 bp | CTTGAGCTTTCATGCGAGCATTTTCTTAGAAGCGGATaGCTCTGGAACAGGTTCTTTCAGGCCTCCAAGTCC | + |
Preference number: 3 (lower is better) Translates to: LELSCEHFLRSG*LWNRFFQASKS Trigger: GGACTTGGAGGCCTGAAAGAACCTGTTCCAGAGGCATCCGCTTCTAAGAAAATGCTCGCATGAAAGCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CAA 90 bp | GAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTTCACAGAGGACACAGTCATGGGGAGGATaGGATAGAAAAATAAACAAA | + |
Preference number: 3 (lower is better) Translates to: EPPLPSHPLQSKPGSQRTQSWGG*DRKINK Trigger: TTTGTTTATTTTTCTATCCAATCCTCCCCATGACTG...TGTCCTCTGTGAACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR CCA 72 bp | GTGCCCAGTGGTACAGACAGAATTTATAGAGTTCTGTaGTCAGATCATACTCTACTGGTCCCACAGAGTGCG | + |
Preference number: 3 (lower is better) Translates to: VPSGTDRIYRVL*SDHTLLVPQSA Trigger: CGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAACTCTATAAATTCTGTCTGTACCACTGGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR CCA 72 bp | GCACACTTCTGTGAGGCAGTTCTCGCCTTTGCAGTATaGCTTTTAAGATGTCTCTCACCGCTGGGTTGTTTT | + |
Preference number: 3 (lower is better) Translates to: AHFCEAVLAFAV*LLRCLSPLGCF Trigger: AAAACAACCCAGCGGTGAGAGACATCTTAAAAGCCATACTGCAAAGGCGAGAACTGCCTCACAGAAGTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CAA 90 bp | AAGTCTCGGGACTCGGGTGTGATATGGTATCTGCAAAAGAGACCTTTTTGTCCATGCTCCTTAAGCTGCTaGTTCAGCTCATCTCCATTG | + |
Preference number: 3 (lower is better) Translates to: KSRDSGVIWYLQKRPFCPCSLSC*FSSSPL Trigger: CAATGGAGATGAGCTGAACAAGCAGCTTAAGGAGCA...TGGACAAAAAGGTCTCTTTTGCAGATACCATATCACACCCGAGTCCCGAGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR CCA 72 bp | CTTTCATGCGAGCATTTTCTTAGAAGCGGATGCCTCTaGAACAGGTTCTTTCAGGCCTCCAAGTCCTTTCTA | + |
Preference number: 3 (lower is better) Translates to: LSCEHFLRSGCL*NRFFQASKSFL Trigger: TAGAAAGGACTTGGAGGCCTGAAAGAACCTGTTCCAGAGGCATCCGCTTCTAAGAAAATGCTCGCATGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR TCA 72 bp | AAAGATGCCAGTGCACTTCAAGTGAGGACACTCACTTaGTCTCTCTCTTCAGAACCCGTTAGTCACCGTTAT | + |
Preference number: 3 (lower is better) Translates to: KDASALQVRTLT*SLSSEPVSHRY Trigger: ATAACGGTGACTAACGGGTTCTGAAGAGAGAGATCAAGTGAGTGTCCTCACTTGAAGTGCACTGGCATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR TCA 72 bp | AAGTGCTCTAACTCTTCTATCTGGCCTCTCTGTGACTaGATAACATTTTCCCTCTCCTTGTCTGGCAGCATC | + |
Preference number: 3 (lower is better) Translates to: KCSNSSIWPLCD*ITFSLSLSGSI Trigger: GATGCTGCCAGACAAGGAGAGGGAAAATGTTATTCAGTCACAGAGAGGCCAGATAGAAGAGTTAGAGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR CCA 72 bp | AACACATGTGGTCATCAAACTGTGGGTCATTGCTACTaGGAACGATGGCGGTATCATGGTCTGGAAAATCAA | + |
Preference number: 3 (lower is better) Translates to: NTCGHQTVGHCY*ERWRYHGLENQ Trigger: TTGATTTTCCAGACCATGATACCGCCATCGTTCCCAGTAGCAATGACCCACAGTTTGATGACCACATGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR GCA 72 bp | TCTGTGGTCAGATCATACTCTACTGGTCCCACAGAGTaGGCCAACAAATTAATATCGTACGGATGTCATTTC | + |
Preference number: 3 (lower is better) Translates to: SVVRSYSTGPTE*ANKLISYGCHF Trigger: GAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR CCA 72 bp | AAGGAGGAGTCATCACCGAAGCTGTTGGAGCACAGATaGTTCAGCTATACGCTGATATTCATACTTGCATTT | + |
Preference number: 3 (lower is better) Translates to: KEESSPKLLEHR*FSYTLIFILAF Trigger: AAATGCAAGTATGAATATCAGCGTATAGCTGAACCATCTGTGCTCCAACAGCTTCGGTGATGACTCCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR CCA 72 bp | AAATATGACACAGCTGACTCACGTGTAGAAGGTCTTTaGATTGTAACTTCCTGTCTCCACTTAACGACGGAC | + |
Preference number: 3 (lower is better) Translates to: KYDTADSRVEGL*IVTSCLHLTTD Trigger: GTCCGTCGTTAAGTGGAGACAGGAAGTTACAATCCAAAGACCTTCTACACGTGAGTCAGCTGTGTCATATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR-3UTR CAA 90 bp | TTCTGTGGTCAGATCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATCTGCTTTTCCCCCTGTaGAACTGTAATGAATTGTCT | + |
Preference number: 3 (lower is better) Translates to: FCGQIILYWSHRVRQQINLLFPL*NCNELS Trigger: AGACAATTCATTACAGTTCAACAGGGGGAAAAGCAG...ATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR-3UTR CAA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTAGAGCAAGATTCTTCTaGGAGATGGCAGGCCTGAGG | + |
Preference number: 3 (lower is better) Translates to: LFLSTASHDSGWEFDISTRARFF*EMAGLR Trigger: CCTCAGGCCTGCCATCTCCAAGAAGAATCTTGCTCT...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR-3UTR CAA 90 bp | TTAAGATGTCTCTCACCGCTGGGTTGTTTTCTTTATCCAGGTAGATCACATTGGTTCTGCATGAGTTGCTaGAAGCTCTTTCATGGATCG | + |
Preference number: 3 (lower is better) Translates to: LRCLSPLGCFLYPGRSHWFCMSC*KLFHGS Trigger: CGATCCATGAAAGAGCTTCAAGCAACTCATGCAGAA...CCAATGTGATCTACCTGGATAAAGAAAACAACCCAGCGGTGAGAGACATCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR GCA 72 bp | AGAGTGATTACTCAAAATCTCATCCTTGAGCTTTCATaGGAGCATTTTCTTAGAAGCGGATGCCTCTGGAAC | + |
Preference number: 3 (lower is better) Translates to: RVITQNLILELS*EHFLRSGCLWN Trigger: GTTCCAGAGGCATCCGCTTCTAAGAAAATGCTCGCATGAAAGCTCAAGGATGAGATTTTGAGTAATCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
||
3UTR TCA 72 bp | CGAAGCTGTTGGAGCACAGATGGTTCAGCTATACGCTaGTATTCATACTTGCATTTTTGCATTATAGCTGCT | + |
Preference number: 3 (lower is better) Translates to: RSCWSTDGSAIR*YSYLHFCIIAA Trigger: AGCAGCTATAATGCAAAAATGCAAGTATGAATATCAGCGTATAGCTGAACCATCTGTGCTCCAACAGCTTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR TCA 72 bp | TATTTCCAAACTAAAAGCATTACAGCTCTAGAGTGCTaGGTGTACTGTGCAGTTACTGAGAGCTGCAAGTTC | + |
Preference number: 3 (lower is better) Translates to: YFQTKSITALEC*VYCAVTESCKF Trigger: GAACTTGCAGCTCTCAGTAACTGCACAGTACACTCAGCACTCTAGAGCTGTAATGCTTTTAGTTTGGAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
3UTR TCA 72 bp | AAGGTTCAGAGCTATGATCTCAATCCGAATTTCTTCTaGTGGCTGTTTGGTATTTGTGGAGACAGAACTTGG | + |
Preference number: 3 (lower is better) Translates to: KVQSYDLNPNFF*WLFGICGDRTW Trigger: CCAAGTTCTGTCTCCACAAATACCAAACAGCCATCAGAAGAAATTCGGATTGAGATCATAGCTCTGAACCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR GCA 72 bp | GTAGGTACAGAAAGTGACAAGTTCTTTATCACCAGATaGCCGAAGGACTTCAGAAGAAAAGGTGACTTTGTT | + |
Preference number: 3 (lower is better) Translates to: VGTESDKFFITR*PKDFRRKGDFV Trigger: AACAAAGTCACCTTTTCTTCTGAAGTCCTTCGGGCATCTGGTGATAAAGAACTTGTCACTTTCTGTACCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR-3UTR CAA 90 bp | TGGGAACTCTTAATCGGAACCAGTATTCTACTGTGCCAAAATTTGGGATGTCTCCAGTCATGGGGAGGATaGGATAGAAAAATAAACAAA | + |
Preference number: 3 (lower is better) Translates to: WELLIGTSILLCQNLGCLQSWGG*DRKINK Trigger: TTTGTTTATTTTTCTATCCAATCCTCCCCATGACTG...GAGACATCCCAAATTTTGGCACAGTAGAATACTGGTTCCGATTAAGAGTTCCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR CAA 90 bp | TGGGAACTCTTAATCGGAACCAGTATTCTACTGTGCCAAAATTTGGGATGTCTCTTAATCGTTTCTACATaGTCCCGAATATTTGACCTC | + |
Preference number: 3 (lower is better) Translates to: WELLIGTSILLCQNLGCLLIVST*SRIFDL Trigger: GAGGTCAAATATTCGGGACAATGTAGAAACGATTAA...GAGACATCCCAAATTTTGGCACAGTAGAATACTGGTTCCGATTAAGAGTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR CAA 90 bp | TTAAGATGTCTCTCACCGCTGGGTTGTTTTCTTTATCCAGGTAGATCACATTGGCGGTCTAGATCTTTATaGATTTTGCTGTCCACTTTT | + |
Preference number: 3 (lower is better) Translates to: LRCLSPLGCFLYPGRSHWRSRSL*ILLSTF Trigger: AAAAGTGGACAGCAAAATCAATAAAGATCTAGACCG...CCAATGTGATCTACCTGGATAAAGAAAACAACCCAGCGGTGAGAGACATCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
3UTR-3UTR CAA 90 bp | TTAAGATGTCTCTCACCGCTGGGTTGTTTTCTTTATCCAGGTAGATCACATTGGTGTCTTTTCAAGTTCTaGTACTGTTTCTGCATGAGT | + |
Preference number: 3 (lower is better) Translates to: LRCLSPLGCFLYPGRSHWCLFKF*YCFCMS Trigger: ACTCATGCAGAAACAGTACAAGAACTTGAAAAGACA...CCAATGTGATCTACCTGGATAAAGAAAACAACCCAGCGGTGAGAGACATCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR TCA 72 bp | ACAACCCTGGATCCAGCATCAGCATCAAAAATGCACTaGTACCACATAACCTGGAACAACTACAATGTTTAT | + |
Preference number: 3 (lower is better) Translates to: TTLDPASASKMH*YHITWNNYNVY Trigger: ATAAACATTGTAGTTGTTCCAGGTTATGTGGTATCAGTGCATTTTTGATGCTGATGCTGGATCCAGGGTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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3UTR CCA 72 bp | GAATTTATAGAGTTCTGTGGTCAGATCATACTCTACTaGTCCCACAGAGTGCGCCAACAAATTAATATCGTA | + |
Preference number: 3 (lower is better) Translates to: EFIEFCGQIILY*SHRVRQQINIV Trigger: TACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAACTCTATAAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR CAA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTCTCAAAATCTCATCCTaGAGCTTTCATGCGAGCATT | + |
Preference number: 3 (lower is better) Translates to: LFLSTASHDSGWEFDISTLKISS*SFHASI Trigger: AATGCTCGCATGAAAGCTCAAGGATGAGATTTTGAG...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR-3UTR CAA 90 bp | AAACAAAATAGGACTGGGAGTAACTTAATAAGTTGGTGCCAAGTCTCCTTCTTTCTCAAAATCTCATCCTaGAGCTTTCATGCGAGCATT | + |
Preference number: 3 (lower is better) Translates to: KQNRTGSNLISWCQVSFFLKISS*SFHASI Trigger: AATGCTCGCATGAAAGCTCAAGGATGAGATTTTGAG...AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACTCCCAGTCCTATTTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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3UTR TCA 72 bp | ATCACTATCATCAAAAACATAGAAACTCAGAGACTCTaGCTTAAGGTAGCGATCCAAATCCATATTCATCGG | + |
Preference number: 3 (lower is better) Translates to: ITIIKNIETQRL*LKVAIQIHIHR Trigger: CCGATGAATATGGATTTGGATCGCTACCTTAAGTCAGAGTCTCTGAGTTTCTATGTTTTTGATGATAGTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR TCA 72 bp | ACTGAAAGAGCATTGCTTTTCTCCACTAGTTGTTTATaGAGCTTAATCGTTTCTACATTGTCCCGAATATTT | + |
Preference number: 3 (lower is better) Translates to: TERALLFSTSCL*SLIVSTLSRIF Trigger: AAATATTCGGGACAATGTAGAAACGATTAAGCTTCATAAACAACTAGTGGAGAAAAGCAATGCTCTTTCAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR TCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCAGGAAGCCACACTTCCTaGGGCAAGCTGGCCCTCAGA | + |
Preference number: 4 (lower is better) Translates to: GLCLCEWNPHFPAILYRAGSHTS*GKLALR Trigger: TCTGAGGGCCAGCTTGCCTCAGGAAGTGTGGCTTCC...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | CTGCTCGTCCTCGGGAGGATCACTGACCACGGTGAAGCGCACACTTCTGTGAGGTTCCCAGGGCATTCCTaGGAGCCTGCACTGGCACTT | + |
Preference number: 4 (lower is better) Translates to: LLVLGRITDHGEAHTSVRFPGHS*EPALAL Trigger: AAGTGCCAGTGCAGGCTCGCAGGAATGCCCTGGGAA...CCTCACAGAAGTGTGCGCTTCACCGTGGTCAGTGATCCTCCCGAGGACGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR TCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCACCAGTTCTTCACGACTaGCACGTGACACTGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: GLCLCEWNPHFPAILYRAPVLHD*HVTLPG Trigger: GCCAGGCAGTGTCACGTGTCAGTCGTGAAGAACTGG...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | GAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTTCACAGAGGACATCTGCTGGGCTGATCTaGGCAGTTGTGGCTGCTTGC | + |
Preference number: 4 (lower is better) Translates to: EPPLPSHPLQSKPGSQRTSAGLI*AVVAAC Trigger: GCAAGCAGCCACAACTGCTCAGATCAGCCCAGCAGA...TGTCCTCTGTGAACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | GAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTTCACAGAGGACATGGACTCTGCTGGGCTaGTCTGAGCAGTTGTGGCTG | + |
Preference number: 4 (lower is better) Translates to: EPPLPSHPLQSKPGSQRTWTLLG*SEQLWL Trigger: CAGCCACAACTGCTCAGATCAGCCCAGCAGAGTCCA...TGTCCTCTGTGAACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | GAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTTCACAGAGGACACTCACCGAGTGCAGCTaGTTCTCAAGGCTGCAGCAC | + |
Preference number: 4 (lower is better) Translates to: EPPLPSHPLQSKPGSQRTLTECS*FSRLQH Trigger: GTGCTGCAGCCTTGAGAAGCAGCTGCACTCGGTGAG...TGTCCTCTGTGAACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | GAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTTCACAGAGGACATTCACGACTGACACGTaGCACTGCCTGGCGAGTCTT | + |
Preference number: 4 (lower is better) Translates to: EPPLPSHPLQSKPGSQRTFTTDT*HCLASL Trigger: AAGACTCGCCAGGCAGTGTCACGTGTCAGTCGTGAA...TGTCCTCTGTGAACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | GAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTTCACAGAGGACAACACGTGACACTGCCTaGCGAGTCTTCACTGTGCGT | + |
Preference number: 4 (lower is better) Translates to: EPPLPSHPLQSKPGSQRTTRDTA*RVFTVR Trigger: ACGCACAGTGAAGACTCGCCAGGCAGTGTCACGTGT...TGTCCTCTGTGAACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATACGACTGTACGACGTCTaGCTGTGTCCCTGGACTTGG | + |
Preference number: 4 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIRLYDV*LCPWTW Trigger: CCAAGTCCAGGGACACAGGCAGACGTCGTACAGTCG...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS-3UTR CCA 90 bp | ATATCCTTTAACTGGGCTTCAAGCTTTTGGATGCGTGCAGCCCTGATATCGAGACCTGCGAGCCTGCACTaGCACTTGCTCTCCGGCGGC | + |
Preference number: 4 (lower is better) Translates to: ISFNWASSFWMRAALISRPASLH*HLLSGG Trigger: GCCGCCGGAGAGCAAGTGCCAGTGCAGGCTCGCAGG...TCTCGATATCAGGGCTGCACGCATCCAAAAGCTTGAAGCCCAGTTAAAGGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR TCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATATTCACGACTGACACGTaGCACTGCCTGGCGAGTCTT | + |
Preference number: 4 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIFTTDT*HCLASL Trigger: AAGACTCGCCAGGCAGTGTCACGTGTCAGTCGTGAA...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS-3UTR CCA 90 bp | TTCTGTGGTCAGATCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATCCTGCGAGCCTGCACTaGCACTTGCTCTCCGGCGGC | + |
Preference number: 4 (lower is better) Translates to: FCGQIILYWSHRVRQQINPASLH*HLLSGG Trigger: GCCGCCGGAGAGCAAGTGCCAGTGCAGGCTCGCAGG...ATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | ATATCCTTTAACTGGGCTTCAAGCTTTTGGATGCGTGCAGCCCTGATATCGAGACACCGGCAGGTCTCCTaGTGTCTCGTCACTTGGGCC | + |
Preference number: 4 (lower is better) Translates to: ISFNWASSFWMRAALISRHRQVS*CLVTWA Trigger: GGCCCAAGTGACGAGACAGCAGGAGACCTGCCGGTG...TCTCGATATCAGGGCTGCACGCATCCAAAAGCTTGAAGCCCAGTTAAAGGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR CCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCACTTGGAGCTGCTGTTTaGCTGATATCAGCCTGTTTT | + |
Preference number: 4 (lower is better) Translates to: GLCLCEWNPHFPAILYRALGAAV*LISACF Trigger: AAAACAGGCTGATATCAGCCAAACAGCAGCTCCAAG...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCAACTGGGAAACACATGTaGTCATCAAACTGTGGGTCA | + |
Preference number: 4 (lower is better) Translates to: GLCLCEWNPHFPAILYRATGKHM*SSNCGS Trigger: TGACCCACAGTTTGATGACCACATGTGTTTCCCAGT...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR CAA 72 bp | AGGCTGCAGCACTTCAGACGCTGCTCCTTAAGCTGCTaGTTCAGCTCATCTCCATTGGCCATCAAGGCATCA | + |
Preference number: 4 (lower is better) Translates to: RLQHFRRCSLSC*FSSSPLAIKAS Trigger: TGATGCCTTGATGGCCAATGGAGATGAGCTGAACAAGCAGCTTAAGGAGCAGCGTCTGAAGTGCTGCAGCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR TCA 90 bp | CTGCTCGTCCTCGGGAGGATCACTGACCACGGTGAAGCGCACACTTCTGTGAGGGCTTCATCCACATTTTaGAATCTTAGACCTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: LLVLGRITDHGEAHTSVRASSTF*NLRPFP Trigger: TGGGAAAGGTCTAAGATTTCAAAATGTGGATGAAGC...CCTCACAGAAGTGTGCGCTTCACCGTGGTCAGTGATCCTCCCGAGGACGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR TCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATACTCTACTCTCCTTTCTaGAAACCTCACCGAGTGCAG | + |
Preference number: 4 (lower is better) Translates to: PLRSTEVLWGGSHGEDWILYSPF*KPHRVQ Trigger: CTGCACTCGGTGAGGTTTTCAGAAAGGAGAGTAGAG...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | GAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTTCACAGAGGACAAGGATACGCAACAGCTaGCAGACCATTTTCTGGTTT | + |
Preference number: 4 (lower is better) Translates to: EPPLPSHPLQSKPGSQRTRIRNS*QTIFWF Trigger: AAACCAGAAAATGGTCTGTCAGCTGTTGCGTATCCT...TGTCCTCTGTGAACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCACCGGCAGGTCTCCTaGTGTCTCGTCACTTGGGCC | + |
Preference number: 4 (lower is better) Translates to: SYSTGPTECANKLISYGCHRQVS*CLVTWA Trigger: GGCCCAAGTGACGAGACAGCAGGAGACCTGCCGGTG...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCATTCTTTATCACCAGATaGCCGAAGGACTTCAGAAGA | + |
Preference number: 4 (lower is better) Translates to: GLCLCEWNPHFPAILYRAFFITR*PKDFRR Trigger: TCTTCTGAAGTCCTTCGGGCATCTGGTGATAAAGAA...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
CDS-3UTR CCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAGTGGGTCATTGCTACTaGGAACGATGGCGGTATCAT | + |
Preference number: 4 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIVGHCY*ERWRYH Trigger: ATGATACCGCCATCGTTCCCAGTAGCAATGACCCAC...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAGAGCTGCTGTTTGGCTaGTATCAGCCTGTTTTTGAG | + |
Preference number: 4 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIELLFG*YQPVFE Trigger: CTCAAAAACAGGCTGATATCAGCCAAACAGCAGCTC...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
||
CDS-3UTR TCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGAAACTTCAGGCGGCTCTaGAGCTCATGCAGCCGCTGC | + |
Preference number: 4 (lower is better) Translates to: ERWQESEAENFKASRYKRNFRRL*SSCSRC Trigger: GCAGCGGCTGCATGAGCTTCAGAGCCGCCTGAAGTT...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | GAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTTCACAGAGGACAGCAAAAATAAGTCATTaGCGTGGACCAGATACTGAG | + |
Preference number: 4 (lower is better) Translates to: EPPLPSHPLQSKPGSQRTAKISH*RGPDTE Trigger: CTCAGTATCTGGTCCACGTCAATGACTTATTTTTGC...TGTCCTCTGTGAACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATATTTGGAGGTAGTCTCTaGACAGCCTCTGGTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIFGGSL*TASGSS Trigger: AGAAGAACCAGAGGCTGTTCAGAGACTACCTCCAAA...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCATCATTAATTCTATCCTaGAGCTCCTCTACTCTCCTT | + |
Preference number: 4 (lower is better) Translates to: GLCLCEWNPHFPAILYRASLILS*SSSTLL Trigger: AAGGAGAGTAGAGGAGCTGCAGGATAGAATTAATGA...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCATGTTTCTGCATGAGTTaGTTGAAGCTCTTTCATGGA | + |
Preference number: 4 (lower is better) Translates to: GLCLCEWNPHFPAILYRACFCMS*LKLFHG Trigger: TCCATGAAAGAGCTTCAAGCAACTCATGCAGAAACA...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAAAGCTTTTGGATGCGTaGAGCCCTGATATCGAGAAG | + |
Preference number: 4 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIKLLDA*SPDIEK Trigger: CTTCTCGATATCAGGGCTGCACGCATCCAAAAGCTT...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCAATCAAATTCATCAACTaGGTCATCTGGCATGATTTC | + |
Preference number: 4 (lower is better) Translates to: GLCLCEWNPHFPAILYRAIKFIN*VIWHDF Trigger: GAAATCATGCCAGATGACTCAGTTGATGAATTTGAT...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | TTAAGATGTCTCTCACCGCTGGGTTGTTTTCTTTATCCAGGTAGATCACATTGGGCATTCCTGCGAGCCTaGACTGGCACTTGCTCTCCG | + |
Preference number: 4 (lower is better) Translates to: LRCLSPLGCFLYPGRSHWAFLRA*TGTCSP Trigger: CGGAGAGCAAGTGCCAGTGCAGGCTCGCAGGAATGC...CCAATGTGATCTACCTGGATAAAGAAAACAACCCAGCGGTGAGAGACATCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR GCA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCAGGGTTGTACAGTTTCTaGTTCATCCACATTTTGAAA | + |
Preference number: 4 (lower is better) Translates to: GLCLCEWNPHFPAILYRAGLYSF*FIHILK Trigger: TTTCAAAATGTGGATGAAGCAGAAACTGTACAACCC...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATATGCACTTTCATCTGCTaGTCCTTTAACTTCCACTGC | + |
Preference number: 4 (lower is better) Translates to: PLRSTEVLWGGSHGEDWICTFIC*SFNFHC Trigger: GCAGTGGAAGTTAAAGGAGCAGCAGATGAAAGTGCA...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCTGCAGCCGCTGCTTTTaGTGCAGACACTGCAGCTGT | + |
Preference number: 4 (lower is better) Translates to: PTECANKLISYGCHFKASCSRCF*CRHCSC Trigger: ACAGCTGCAGTGTCTGCAGCAAAAGCAGCGGCTGCA...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGAGCCGTCTGTGGACTCTaGTGGGCTGATCTGAGCAGT | + |
Preference number: 4 (lower is better) Translates to: ERWQESEAENFKASRYKRAVCGL*WADLSS Trigger: ACTGCTCAGATCAGCCCAGCAGAGTCCACAGACGGC...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | GAACCCCCACTTCCCAGCCATCCTCTACAGAGCAAGCCTGGTTCACAGAGGACAATAGTTCCTGCAGCATaGTTTTCCTTATCCATCAAC | + |
Preference number: 4 (lower is better) Translates to: EPPLPSHPLQSKPGSQRTIVPAA*FSLSIN Trigger: GTTGATGGATAAGGAAAAGCATGCTGCAGGAACTAT...TGTCCTCTGTGAACCAGGCTTGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | AAGTCTCGGGACTCGGGTGTGATATGGTATCTGCAAAAGAGACCTTTTTGTCCAGTCTGCCTGTGTCCCTaGACTTGGAGCTGCTGTTTG | + |
Preference number: 4 (lower is better) Translates to: KSRDSGVIWYLQKRPFCPVCLCP*TWSCCL Trigger: CAAACAGCAGCTCCAAGTCCAGGGACACAGGCAGAC...TGGACAAAAAGGTCTCTTTTGCAGATACCATATCACACCCGAGTCCCGAGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR CCA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCTTCCACTGCTCTTCATaGGCAGCACTGAAGGCGCTG | + |
Preference number: 4 (lower is better) Translates to: PTECANKLISYGCHFKASFHCSS*AALKAL Trigger: CAGCGCCTTCAGTGCTGCCCATGAAGAGCAGTGGAA...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR CAA 72 bp | TCAAAGCCTCCCAAGGAGGAGTCATCACCGAAGCTGTaGGAGCACAGATGGTTCAGCTATACGCTGATATTC | + |
Preference number: 4 (lower is better) Translates to: SKPPKEESSPKL*EHRWFSYTLIF Trigger: GAATATCAGCGTATAGCTGAACCATCTGTGCTCCAACAGCTTCGGTGATGACTCCTCCTTGGGAGGCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR CAA 72 bp | ACACGCTGCAATTGTTTCGTAATCTGTGCTGTGGGCTaGGTGGAGCTCCAGCGTGACAGTGTTCTTCTGAAT | + |
Preference number: 4 (lower is better) Translates to: TRCNCFVICAVG*VELQRDSVLLN Trigger: ATTCAGAAGAACACTGTCACGCTGGAGCTCCACCAAGCCCACAGCACAGATTACGAAACAATTGCAGCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CAA 72 bp | ACTGGGAAACACATGTGGTCATCAAACTGTGGGTCATaGCTACTGGGAACGATGGCGGTATCATGGTCTGGA | + |
Preference number: 4 (lower is better) Translates to: TGKHMWSSNCGS*LLGTMAVSWSG Trigger: TCCAGACCATGATACCGCCATCGTTCCCAGTAGCAATGACCCACAGTTTGATGACCACATGTGTTTCCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR TCA 90 bp | TGGGAACTCTTAATCGGAACCAGTATTCTACTGTGCCAAAATTTGGGATGTCTCCCAGTTCTTCACGACTaGCACGTGACACTGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: WELLIGTSILLCQNLGCLPVLHD*HVTLPG Trigger: GCCAGGCAGTGTCACGTGTCAGTCGTGAAGAACTGG...GAGACATCCCAAATTTTGGCACAGTAGAATACTGGTTCCGATTAAGAGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR TCA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCTGTCACTCTCCTGGTTaGAGAACTTCAGGCGGCTCT | + |
Preference number: 4 (lower is better) Translates to: PTECANKLISYGCHFKASCHSPG*RTSGGS Trigger: AGAGCCGCCTGAAGTTCTTCAACCAGGAGAGTGACA...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | AAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCAAGGAGGAGTCATCACCTTCCCAGGGCATTCCTaGGAGCCTGCACTGGCACTT | + |
Preference number: 4 (lower is better) Translates to: KLISYGCHFKASQGGVITFPGHS*EPALAL Trigger: AAGTGCCAGTGCAGGCTCGCAGGAATGCCCTGGGAA...GGTGATGACTCCTCCTTGGGAGGCTTTGAAATGACATCCGTACGATATTAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTACCCACTGTCCACTCTaGGGTTTGGGCAGGGACATA | + |
Preference number: 4 (lower is better) Translates to: SYSTGPTECANKLISYGCTHCPL*GLGRDI Trigger: TATGTCCCTGCCCAAACCCCAGAGTGGACAGTGGGT...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATACTCGCCTTTGCAGTATaGCTTTTAAGATGTCTCTCA | + |
Preference number: 4 (lower is better) Translates to: PLRSTEVLWGGSHGEDWILAFAV*LLRCLS Trigger: TGAGAGACATCTTAAAAGCCATACTGCAAAGGCGAG...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | GATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCCCCTGGACTTGGAGCTaGTGTTTGGCTGATATCAGC | + |
Preference number: 4 (lower is better) Translates to: DVVFFPLLHFPHIFFYLSPWTWS*CLADIS Trigger: GCTGATATCAGCCAAACAGCAGCTCCAAGTCCAGGG...GCTAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR GCA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCGCTGCTCCTTAAGCTaGTTGTTCAGCTCATCTCCA | + |
Preference number: 4 (lower is better) Translates to: PTECANKLISYGCHFKASRCSLS*LFSSSP Trigger: TGGAGATGAGCTGAACAAGCAGCTTAAGGAGCAGCG...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTGAAAACCTCACCGAGTaGAGCTGCTTCTCAAGGCTG | + |
Preference number: 4 (lower is better) Translates to: SYSTGPTECANKLISYGCENLTE*SCFSRL Trigger: CAGCCTTGAGAAGCAGCTGCACTCGGTGAGGTTTTC...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | TGGGAACTCTTAATCGGAACCAGTATTCTACTGTGCCAAAATTTGGGATGTCTCACACGTGACACTGCCTaGCGAGTCTTCACTGTGCGT | + |
Preference number: 4 (lower is better) Translates to: WELLIGTSILLCQNLGCLTRDTA*RVFTVR Trigger: ACGCACAGTGAAGACTCGCCAGGCAGTGTCACGTGT...GAGACATCCCAAATTTTGGCACAGTAGAATACTGGTTCCGATTAAGAGTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR CCA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCTGGGCTTCAAGCTTTTaGATGCGTGCAGCCCTGATA | + |
Preference number: 4 (lower is better) Translates to: PTECANKLISYGCHFKASWASSF*MRAALI Trigger: TATCAGGGCTGCACGCATCCAAAAGCTTGAAGCCCA...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATATGTGGAGACAGAACTTaGAATGATACAGTCATCACT | + |
Preference number: 4 (lower is better) Translates to: PLRSTEVLWGGSHGEDWICGDRT*NDTVIT Trigger: AGTGATGACTGTATCATTCCAAGTTCTGTCTCCACA...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | AAACAAAATAGGACTGGGAGTAACTTAATAAGTTGGTGCCAAGTCTCCTTCTTTGCATTCCTGCGAGCCTaGACTGGCACTTGCTCTCCG | + |
Preference number: 4 (lower is better) Translates to: KQNRTGSNLISWCQVSFFAFLRA*TGTCSP Trigger: CGGAGAGCAAGTGCCAGTGCAGGCTCGCAGGAATGC...AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACTCCCAGTCCTATTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS-3UTR GCA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCTCCTTTAACTTCCACTaGTCTTCATGGGCAGCACTG | + |
Preference number: 4 (lower is better) Translates to: PTECANKLISYGCHFKASSFNFH*SSWAAL Trigger: CAGTGCTGCCCATGAAGAGCAGTGGAAGTTAAAGGA...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCTTGTATACCACATATaGGTGTGGCTGCAGGTAGCT | + |
Preference number: 4 (lower is better) Translates to: PTECANKLISYGCHFKASLVYHI*VWLQVA Trigger: AGCTACCTGCAGCCACACGCATATGTGGTATACAAG...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | AAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCAAGGAGGAGTCATCACCCTGTGTCCCTGGACTTaGAGCTGCTGTTTGGCTGAT | + |
Preference number: 4 (lower is better) Translates to: KLISYGCHFKASQGGVITLCPWT*SCCLAD Trigger: ATCAGCCAAACAGCAGCTCCAAGTCCAGGGACACAG...GGTGATGACTCCTCCTTGGGAGGCTTTGAAATGACATCCGTACGATATTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR CAA 72 bp | TTTATAAGCAGGAGTGCTTCACTGAGGTCATCAGCATaGATGTCACTCTCCTGGTTGAAGAACTTCAGGCGG | + |
Preference number: 4 (lower is better) Translates to: FISRSASLRSSA*MSLSWLKNFRR Trigger: CCGCCTGAAGTTCTTCAACCAGGAGAGTGACATCAATGCTGATGACCTCAGTGAAGCACTCCTGCTTATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CAA 72 bp | CTAGAATCTCATGGAATCTCAACTGACACGCTGCAATaGTTTCGTAATCTGTGCTGTGGGCTTGGTGGAGCT | + |
Preference number: 4 (lower is better) Translates to: LESHGISTDTLQ*FRNLCCGLGGA Trigger: AGCTCCACCAAGCCCACAGCACAGATTACGAAACAATTGCAGCGTGTCAGTTGAGATTCCATGAGATTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CAA 72 bp | CCCACATTTTCTTCTACCTTAGCCACACCGCTTTCCTaGGAAGGATACGCAACAGCTGACAGACCATTTTCT | + |
Preference number: 4 (lower is better) Translates to: PTFSSTLATPLS*EGYATADRPFS Trigger: AGAAAATGGTCTGTCAGCTGTTGCGTATCCTTCCAAGGAAAGCGGTGTGGCTAAGGTAGAAGAAAATGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR TCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGAGAGCTGCTGTTTGGCTaGTATCAGCCTGTTTTTGAG | + |
Preference number: 4 (lower is better) Translates to: ERWQESEAENFKASRYKRELLFG*YQPVFE Trigger: CTCAAAAACAGGCTGATATCAGCCAAACAGCAGCTC...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGAAAGGCAGTTTCGAGCTaGGCAATCTGCACTTTCATC | + |
Preference number: 4 (lower is better) Translates to: ERWQESEAENFKASRYKRKAVSS*AICTFI Trigger: GATGAAAGTGCAGATTGCTCAGCTCGAAACTGCCTT...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | AAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCAAGGAGGAGTCATCACCGGATGCGTGCAGCCCTaGTATCGAGAAGATGAACAT | + |
Preference number: 4 (lower is better) Translates to: KLISYGCHFKASQGGVITGCVQP*YREDEH Trigger: ATGTTCATCTTCTCGATATCAGGGCTGCACGCATCC...GGTGATGACTCCTCCTTGGGAGGCTTTGAAATGACATCCGTACGATATTAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCATGTCTCTTCCTTTCTaGAACAGGTCAGCAAGGTCA | + |
Preference number: 4 (lower is better) Translates to: PTECANKLISYGCHFKASMSLPF*NRSARS Trigger: TGACCTTGCTGACCTGTTTCAGAAAGGAAGAGACAT...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | AAACAAAATAGGACTGGGAGTAACTTAATAAGTTGGTGCCAAGTCTCCTTCTTTCGACTGTACGACGTCTaGCTGTGTCCCTGGACTTGG | + |
Preference number: 4 (lower is better) Translates to: KQNRTGSNLISWCQVSFFRLYDV*LCPWTW Trigger: CCAAGTCCAGGGACACAGGCAGACGTCGTACAGTCG...AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACTCCCAGTCCTATTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS-3UTR GCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGAGATACACTTGTCATGTaGCAGGGAAATCAGAGGCAC | + |
Preference number: 4 (lower is better) Translates to: ERWQESEAENFKASRYKRDTLVM*QGNQRH Trigger: GTGCCTCTGATTTCCCTGGCACATGACAAGTGTATC...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCCTCTGGTTCTTCTCTaGAAACGAACTTTCCAAGGT | + |
Preference number: 4 (lower is better) Translates to: PTECANKLISYGCHFKASPLVLL*KRTFQG Trigger: ACCTTGGAAAGTTCGTTTGCAGAGAAGAACCAGAGG...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | TTCTGTGGTCAGATCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATGCCATCAAGGCATCATaGCTGATCCTGAGTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: FCGQIILYWSHRVRQQINAIKAS*LILSVL Trigger: AAGAACACTCAGGATCAGCCATGATGCCTTGATGGC...ATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | TTCTGTGGTCAGATCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATTTGATGTCACTCTCCTaGTTGAAGAACTTCAGGCGG | + |
Preference number: 4 (lower is better) Translates to: FCGQIILYWSHRVRQQINLMSLS*LKNFRR Trigger: CCGCCTGAAGTTCTTCAACCAGGAGAGTGACATCAA...ATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTTCTGTGCTGTGGGCTTaGTGGAGCTCCAGCGTGACA | + |
Preference number: 4 (lower is better) Translates to: LFLSTASHDSGWEFDISTSVLWA*WSSSVT Trigger: TGTCACGCTGGAGCTCCACCAAGCCCACAGCACAGA...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | AAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCAAGGAGGAGTCATCACCTGCTACTGGGAACGATaGCGGTATCATGGTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: KLISYGCHFKASQGGVITCYWER*RYHGLE Trigger: TTCCAGACCATGATACCGCCATCGTTCCCAGTAGCA...GGTGATGACTCCTCCTTGGGAGGCTTTGAAATGACATCCGTACGATATTAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
CDS-3UTR GCA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCATCTGCACTTTCATCTaGTGCTCCTTTAACTTCCAC | + |
Preference number: 4 (lower is better) Translates to: PTECANKLISYGCHFKASICTFI*CSFNFH Trigger: GTGGAAGTTAAAGGAGCAGCAGATGAAAGTGCAGAT...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
CDS-3UTR GCA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAAAGCTCATGCAGCCGCTaGTTTTGCTGCAGACACTGC | + |
Preference number: 4 (lower is better) Translates to: NIMGLNDTVAAQSQRKLESSCSR*FCCRHC Trigger: GCAGTGTCTGCAGCAAAAGCAGCGGCTGCATGAGCT...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
||
CDS-3UTR CCA 90 bp | GATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCCTTGGAGCTGCTGTTTaGCTGATATCAGCCTGTTTT | + |
Preference number: 4 (lower is better) Translates to: DVVFFPLLHFPHIFFYLSLGAAV*LISACF Trigger: AAAACAGGCTGATATCAGCCAAACAGCAGCTCCAAG...GCTAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
||
CDS-3UTR CCA 90 bp | AAACAAAATAGGACTGGGAGTAACTTAATAAGTTGGTGCCAAGTCTCCTTCTTTGTCTGCCTGTGTCCCTaGACTTGGAGCTGCTGTTTG | + |
Preference number: 4 (lower is better) Translates to: KQNRTGSNLISWCQVSFFVCLCP*TWSCCL Trigger: CAAACAGCAGCTCCAAGTCCAGGGACACAGGCAGAC...AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACTCCCAGTCCTATTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS-3UTR CCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGAGATGTCTCTCACCGCTaGGTTGTTTTCTTTATCCAG | + |
Preference number: 4 (lower is better) Translates to: ERWQESEAENFKASRYKRDVSHR*VVFFIQ Trigger: CTGGATAAAGAAAACAACCCAGCGGTGAGAGACATC...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | TTCTGTGGTCAGATCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATTGTCTTTCAAGCTCATaGACTTTTTCTTGCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: FCGQIILYWSHRVRQQINCLSSS*TFSCSC Trigger: GCAGCTGCAAGAAAAAGTTCATGAGCTTGAAAGACA...ATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTTCTTTTCTCTTCAACTaGGTTTTCAGGATCTCTGCC | + |
Preference number: 4 (lower is better) Translates to: SYSTGPTECANKLISYGCSFLFN*VFRISA Trigger: GGCAGAGATCCTGAAAACTCAGTTGAAGAGAAAAGA...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | AAACAAAATAGGACTGGGAGTAACTTAATAAGTTGGTGCCAAGTCTCCTTCTTTGGTGGAGCTCCAGCGTaGCAGTGTTCTTCTGAATGT | + |
Preference number: 4 (lower is better) Translates to: KQNRTGSNLISWCQVSFFGGAPA*QCSSEC Trigger: ACATTCAGAAGAACACTGTCACGCTGGAGCTCCACC...AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACTCCCAGTCCTATTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTGTCTTCAGTAGTTATTaGTCCACTTGGTGGAAGGTA | + |
Preference number: 4 (lower is better) Translates to: SYSTGPTECANKLISYGCVFSSY*STWWKV Trigger: TACCTTCCACCAAGTGGATCAATAACTACTGAAGAC...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTCCCTGGACTTGGAGCTaGTGTTTGGCTGATATCAGC | + |
Preference number: 4 (lower is better) Translates to: LFLSTASHDSGWEFDISTPWTWS*CLADIS Trigger: GCTGATATCAGCCAAACAGCAGCTCCAAGTCCAGGG...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCTTCTTGTACTGTTTCTaGATGAGTTGCTTGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: PTECANKLISYGCHFKASFLYCF*MSCLKL Trigger: GAGCTTCAAGCAACTCATGCAGAAACAGTACAAGAA...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | AAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCAAGGAGGAGTCATCACCTCTCTGAACAGCCTCTaGTTCTTCTCTGCAAACGAA | + |
Preference number: 4 (lower is better) Translates to: KLISYGCHFKASQGGVITSLNSL*FFSANE Trigger: TTCGTTTGCAGAGAAGAACCAGAGGCTGTTCAGAGA...GGTGATGACTCCTCCTTGGGAGGCTTTGAAATGACATCCGTACGATATTAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | AAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCAAGGAGGAGTCATCACCGACTCGGGTGTGATATaGTATCTGCAAAAGAGACCT | + |
Preference number: 4 (lower is better) Translates to: KLISYGCHFKASQGGVITDSGVI*YLQKRP Trigger: AGGTCTCTTTTGCAGATACCATATCACACCCGAGTC...GGTGATGACTCCTCCTTGGGAGGCTTTGAAATGACATCCGTACGATATTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGACTTCTGATGGCTGTTTaGTATTTGTGGAGACAGAAC | + |
Preference number: 4 (lower is better) Translates to: ERWQESEAENFKASRYKRLLMAV*YLWRQN Trigger: GTTCTGTCTCCACAAATACCAAACAGCCATCAGAAG...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | TTCTGTGGTCAGATCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATGCTTCATCCACATTTTaGAATCTTAGACCTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: FCGQIILYWSHRVRQQINASSTF*NLRPFP Trigger: TGGGAAAGGTCTAAGATTTCAAAATGTGGATGAAGC...ATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTTCTCCTCGTTCTAGGTaGATGGTTTCATCAAATTCA | + |
Preference number: 4 (lower is better) Translates to: SYSTGPTECANKLISYGCSPRSR*MVSSNS Trigger: TGAATTTGATGAAACCATCCACCTAGAACGAGGAGA...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR CAA 72 bp | TCCTTATCCATCAACTCAAATATTCCTGAGATACACTaGTCATGTGCCAGGGAAATCAGAGGCACATTGACT | + |
Preference number: 4 (lower is better) Translates to: SLSINSNIPEIH*SCAREIRGTLT Trigger: AGTCAATGTGCCTCTGATTTCCCTGGCACATGACAAGTGTATCTCAGGAATATTTGAGTTGATGGATAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CAA 72 bp | AAGGATACGCAACAGCTGACAGACCATTTTCTGGTTTaGGTCCCACTTCTGGAGAACTGTCTTTTATATCTT | + |
Preference number: 4 (lower is better) Translates to: KDTQQLTDHFLV*VPLLENCLLYL Trigger: AAGATATAAAAGACAGTTCTCCAGAAGTGGGACCAAAACCAGAAAATGGTCTGTCAGCTGTTGCGTATCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR TCA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTGTGACAGTGTTCTTCTaGATGTACTGCAAAAATAAG | + |
Preference number: 4 (lower is better) Translates to: SYSTGPTECANKLISYGCVTVFF*MYCKNK Trigger: CTTATTTTTGCAGTACATTCAGAAGAACACTGTCAC...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAAGTTGTGGCTGCTTGCTaGCTCGACAATTGCATTTTC | + |
Preference number: 4 (lower is better) Translates to: NIMGLNDTVAAQSQRKLEVVAAC*LDNCIF Trigger: GAAAATGCAATTGTCGAGTCAGCAAGCAGCCACAAC...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGACATTTTACTGTAACATaGAGTTCATTCAAGTTGCCG | + |
Preference number: 4 (lower is better) Translates to: ERWQESEAENFKASRYKRHFTVT*SSFKLP Trigger: CGGCAACTTGAATGAACTTCATGTTACAGTAAAATG...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTAATCCGAATTTCTTCTaGTGGCTGTTTGGTATTTGT | + |
Preference number: 4 (lower is better) Translates to: SYSTGPTECANKLISYGCNPNFF*WLFGIC Trigger: ACAAATACCAAACAGCCATCAGAAGAAATTCGGATT...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | GAGATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTATCTTGCTTGCGGGCATaGTGTTTAAGTAAAATGTTC | + |
Preference number: 4 (lower is better) Translates to: EMSSSFPCCISPTFSSTLSCLRA*CLSKMF Trigger: GAACATTTTACTTAAACAGCATGCCCGCAAGCAAGA...TAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR GCA 90 bp | GATGTCGTCTTCTTTCCCTTGTTGCATTTCCCCCACATTTTCTTCTACCTTAGCGGGTTGTACAGTTTCTaGTTCATCCACATTTTGAAA | + |
Preference number: 4 (lower is better) Translates to: DVVFFPLLHFPHIFFYLSGLYSF*FIHILK Trigger: TTTCAAAATGTGGATGAAGCAGAAACTGTACAACCC...GCTAAGGTAGAAGAAAATGTGGGGGAAATGCAACAAGGGAAAGAAGACGACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR CCA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGACTTGAAGCTCTTTCATaGATCGGTCTAGATCTTTAT | + |
Preference number: 4 (lower is better) Translates to: ERWQESEAENFKASRYKRLEALS*IGLDLY Trigger: ATAAAGATCTAGACCGATCCATGAAAGAGCTTCAAG...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | AAACAAAATAGGACTGGGAGTAACTTAATAAGTTGGTGCCAAGTCTCCTTCTTTGTGGTCATCAAACTGTaGGTCATTGCTACTGGGAAC | + |
Preference number: 4 (lower is better) Translates to: KQNRTGSNLISWCQVSFFVVIKL*VIATGN Trigger: GTTCCCAGTAGCAATGACCCACAGTTTGATGACCAC...AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACTCCCAGTCCTATTTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | TTCTGTGGTCAGATCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATCATTTCAATATAACTTaGATAGTTCCTGCAGCATGC | + |
Preference number: 4 (lower is better) Translates to: FCGQIILYWSHRVRQQINHFNIT*IVPAAC Trigger: GCATGCTGCAGGAACTATCCAAGTTATATTGAAATG...ATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTTTTTGGTCCCACTTCTaGAGAACTGTCTTTTATATC | + |
Preference number: 4 (lower is better) Translates to: SYSTGPTECANKLISYGCFWSHF*RTVFYI Trigger: GATATAAAAGACAGTTCTCCAGAAGTGGGACCAAAA...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTTGCTGTTCTCGAAGCTaGAGAAGAGATAGCTCGATT | + |
Preference number: 4 (lower is better) Translates to: LFLSTASHDSGWEFDISTCCSRS*RRDSSI Trigger: AATCGAGCTATCTCTTCTTCAGCTTCGAGAACAGCA...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | AAACAAAATAGGACTGGGAGTAACTTAATAAGTTGGTGCCAAGTCTCCTTCTTTATTGTCCCGAATATTTaGCCTCTGATCTGTAGCCTG | + |
Preference number: 4 (lower is better) Translates to: KQNRTGSNLISWCQVSFFIVPNI*PLICSL Trigger: CAGGCTACAGATCAGAGGTCAAATATTCGGGACAAT...AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACTCCCAGTCCTATTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAAACGTGGACCAGATACTaGGAAGTGAAGTTATACTCC | + |
Preference number: 4 (lower is better) Translates to: NIMGLNDTVAAQSQRKLETWTRY*EVKLYS Trigger: GGAGTATAACTTCACTTCTCAGTATCTGGTCCACGT...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | AAACAAAATAGGACTGGGAGTAACTTAATAAGTTGGTGCCAAGTCTCCTTCTTTAGGATCTCTGCCAAGTaGTCTAACTCTTCTATCTGG | + |
Preference number: 4 (lower is better) Translates to: KQNRTGSNLISWCQVSFFRISAK*SNSSIW Trigger: CCAGATAGAAGAGTTAGAGCACTTGGCAGAGATCCT...AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACTCCCAGTCCTATTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTGGCAGTTCTCGCCTTTaGAGTATGGCTTTTAAGATG | + |
Preference number: 4 (lower is better) Translates to: LFLSTASHDSGWEFDISTGSSRL*SMAFKM Trigger: CATCTTAAAAGCCATACTGCAAAGGCGAGAACTGCC...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTCATATTCATCGGCACTaGGAAACACATGTGGTCATC | + |
Preference number: 4 (lower is better) Translates to: LFLSTASHDSGWEFDISTHIHRH*ETHVVI Trigger: GATGACCACATGTGTTTCCCAGTGCCGATGAATATG...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR CAA 72 bp | GCTATGATCTCAATCCGAATTTCTTCTGATGGCTGTTaGGTATTTGTGGAGACAGAACTTGGAATGATACAG | + |
Preference number: 4 (lower is better) Translates to: AMISIRISSDGC*VFVETELGMIQ Trigger: CTGTATCATTCCAAGTTCTGTCTCCACAAATACCAAACAGCCATCAGAAGAAATTCGGATTGAGATCATAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR CCA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAAACCATTTTCTGGTTTTaGTCCCACTTCTGGAGAACT | + |
Preference number: 4 (lower is better) Translates to: NIMGLNDTVAAQSQRKLETIFWF*SHFWRT Trigger: AGTTCTCCAGAAGTGGGACCAAAACCAGAAAATGGT...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR CAA 72 bp | TCTCTTTCAGTCTTTAGTTTGTCAAGGACTTCGGTTTaGTCTGTAAGATCAGATTTTAAGGCAGTTTCGAGC | + |
Preference number: 4 (lower is better) Translates to: SLSVFSLSRTSV*SVRSDFKAVSS Trigger: GCTCGAAACTGCCTTAAAATCTGATCTTACAGACAAAACCGAAGTCCTTGACAAACTAAAGACTGAAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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3UTR CAA 72 bp | TGGTGGAAGGTAGGTGAATTTCCATTTCAATATAACTaGGATAGTTCCTGCAGCATGCTTTTCCTTATCCAT | + |
Preference number: 4 (lower is better) Translates to: WWKVGEFPFQYN*DSSCSMLFLIH Trigger: ATGGATAAGGAAAAGCATGCTGCAGGAACTATCCAAGTTATATTGAAATGGAAATTCACCTACCTTCCACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR TCA 90 bp | AAACAAAATAGGACTGGGAGTAACTTAATAAGTTGGTGCCAAGTCTCCTTCTTTTATCTGGCCTCTCTGTaGCTGAATAACATTTTCCAA | + |
Preference number: 4 (lower is better) Translates to: KQNRTGSNLISWCQVSFFYLASL*LNNIFQ Trigger: TTGGAAAATGTTATTCAGTCACAGAGAGGCCAGATA...AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACTCCCAGTCCTATTTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAACAACTCAAATATTCCTaGGATACACTTGTCATGTGC | + |
Preference number: 4 (lower is better) Translates to: NIMGLNDTVAAQSQRKLEQLKYS*DTLVMC Trigger: GCACATGACAAGTGTATCTCAGGAATATTTGAGTTG...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTTCTTGCTTGCGGGCATaGTGTTTAAGTAAAATGTTC | + |
Preference number: 4 (lower is better) Translates to: LFLSTASHDSGWEFDISTSCLRA*CLSKMF Trigger: GAACATTTTACTTAAACAGCATGCCCGCAAGCAAGA...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTAACTTGGATAGTTCCTaGAGCATGCTTTTCCTTATC | + |
Preference number: 4 (lower is better) Translates to: LFLSTASHDSGWEFDISTNLDSS*SMLFLI Trigger: GATAAGGAAAAGCATGCTGCAGGAACTATCCAAGTT...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAAGCAATATCCTTTAACTaGGCTTCAAGCTTTTGGATG | + |
Preference number: 4 (lower is better) Translates to: NIMGLNDTVAAQSQRKLEAISFN*ASSFWM Trigger: CATCCAAAAGCTTGAAGCCCAGTTAAAGGATATTGC...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAATACTGTGCCAAAATTTaGGATGTCTCCTTTAGTTCC | + |
Preference number: 4 (lower is better) Translates to: NIMGLNDTVAAQSQRKLEYCAKI*DVSFSS Trigger: GGAACTAAAGGAGACATCCCAAATTTTGGCACAGTA...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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3UTR CAA 72 bp | AATGAAGAGTCGCTGAATAGTATCCTCCCTGGTTATTaGAGAATCATTAAGGTTCAGAGCTATGATCTCAAT | + |
Preference number: 4 (lower is better) Translates to: NEESLNSILPGY*RIIKVQSYDLN Trigger: ATTGAGATCATAGCTCTGAACCTTAATGATTCTCAAATAACCAGGGAGGATACTATTCAGCGACTCTTCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR TCA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTTTTTCCTTCTATGACTaGAAGAGCATTGCTTTTCTC | + |
Preference number: 4 (lower is better) Translates to: LFLSTASHDSGWEFDISTFSFYD*KSIAFL Trigger: GAGAAAAGCAATGCTCTTTCAGTCATAGAAGGAAAA...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR TCA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAACTGATATCGAGAAGATaGACATATTGTTCCACTTTG | + |
Preference number: 4 (lower is better) Translates to: NIMGLNDTVAAQSQRKLELISRR*TYCSTL Trigger: CAAAGTGGAACAATATGTTCATCTTCTCGATATCAG...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR GCA 90 bp | AAACAAAATAGGACTGGGAGTAACTTAATAAGTTGGTGCCAAGTCTCCTTCTTTTTAATTTTATCCTCTTaGTTGCGGGCATGCTGTTTA | + |
Preference number: 4 (lower is better) Translates to: KQNRTGSNLISWCQVSFFLILSS*LRACCL Trigger: TAAACAGCATGCCCGCAAGCAAGAGGATAAAATTAA...AAAGAAGGAGACTTGGCACCAACTTATTAAGTTACTCCCAGTCCTATTTTGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS-3UTR GCA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAAAGAACATCAATATCTTaGTCTATGATGTCTCTTCCT | + |
Preference number: 4 (lower is better) Translates to: NIMGLNDTVAAQSQRKLERTSIS*SMMSLP Trigger: AGGAAGAGACATCATAGAGCAAGATATTGATGTTCT...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CCA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTTCTGTCTTCATCTTCTaGTTCCAATTCTTCAGTTAT | + |
Preference number: 4 (lower is better) Translates to: LFLSTASHDSGWEFDISTSVFIF*FQFFSY Trigger: ATAACTGAAGAATTGGAACCAGAAGATGAAGACAGA...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS GCA 90 bp | CGGCGGCCGGTGTTAACTCGAGCCTGCACTCGACTGTACGACGTCTaGCTGTGTCCCTGGACTTGGAGCTGCTGTTTGGCTGATATCAGC | + |
Preference number: 5 (lower is better) Translates to: RRPVLTRACTRLYDV*LCPWTWSCCLADIS Trigger: GCTGATATCAGCCAAACAGCAGCTCCAAGTCCAGGGACACAGGCAGACGTCGTACAGTCGAGTGCAGGCTCGAGTTAACACCGGCCGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS-3UTR CAA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAGCCACACCGCTTTCCTaGGAAGGATACGCAACAGCT | + |
Preference number: 5 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIATPLS*EGYATA Trigger: AGCTGTTGCGTATCCTTCCAAGGAAAGCGGTGTGGC...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS CCA 90 bp | TTAACTCGAGCCTGCACTCGACTGTACGACGTCTGCCTGTGTCCCTaGACTTGGAGCTGCTGTTTGGCTGATATCAGCCTGTTTTTGAGA | + |
Preference number: 5 (lower is better) Translates to: LTRACTRLYDVCLCP*TWSCCLADISLFLR Trigger: TCTCAAAAACAGGCTGATATCAGCCAAACAGCAGCTCCAAGTCCAGGGACACAGGCAGACGTCGTACAGTCGAGTGCAGGCTCGAGTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS TCA 90 bp | TCTCATCATGCAAACGCAAAAATCTGTCTTCCAGTTCTTCACGACTaGCACGTGACACTGCCTGGCGAGTCTTCACTGTGCGTGCAGTTG | + |
Preference number: 5 (lower is better) Translates to: SHHANAKICLPVLHD*HVTLPGESSLCVQL Trigger: CAACTGCACGCACAGTGAAGACTCGCCAGGCAGTGTCACGTGTCAGTCGTGAAGAACTGGAAGACAGATTTTTGCGTTTGCATGATGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047783.14 ENSMUST00000132757.2 ENSMUST00000139113.8 ENSMUST00000209564.2 |
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CDS-3UTR CAA 90 bp | GGCGGCTCTGAAGCTCATGCAGCCGCTGCTTTTGCTGCAGACACTGCAGCTGTATCTTCAAGTAAACTATaGCTGTATTTTGTGAGCGTG | + |
Preference number: 5 (lower is better) Translates to: GGSEAHAAAAFAADTAAVSSSKL*LYFVSV Trigger: CACGCTCACAAAATACAGCAATAGTTTACTTGAAGA...TACAGCTGCAGTGTCTGCAGCAAAAGCAGCGGCTGCATGAGCTTCAGAGCCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR CAA 90 bp | GGGCTGTGTCTGTGTGAGTGGAACCCCCACTTCCCAGCCATCCTCTACAGAGCACGGTCTAGATCTTTATaGATTTTGCTGTCCACTTTT | + |
Preference number: 5 (lower is better) Translates to: GLCLCEWNPHFPAILYRARSRSL*ILLSTF Trigger: AAAAGTGGACAGCAAAATCAATAAAGATCTAGACCG...TGCTCTGTAGAGGATGGCTGGGAAGTGGGGGTTCCACTCACACAGACACAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATACTGTTTCTGCATGAGTaGCTTGAAGCTCTTTCATGG | + |
Preference number: 5 (lower is better) Translates to: PLRSTEVLWGGSHGEDWILFLHE*LEALSW Trigger: CCATGAAAGAGCTTCAAGCAACTCATGCAGAAACAG...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | TTCTGTGGTCAGATCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATTGTCCACTCTGGGGTTaGGGCAGGGACATAGGAGTC | + |
Preference number: 5 (lower is better) Translates to: FCGQIILYWSHRVRQQINCPLWG*GRDIGV Trigger: GACTCCTATGTCCCTGCCCAAACCCCAGAGTGGACA...ATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS GCA 90 bp | TGCACTCGACTGTACGACGTCTGCCTGTGTCCCTGGACTTGGAGCTaGTGTTTGGCTGATATCAGCCTGTTTTTGAGAACTTCATTTTGT | + |
Preference number: 5 (lower is better) Translates to: CTRLYDVCLCPWTWS*CLADISLFLRTSFC Trigger: ACAAAATGAAGTTCTCAAAAACAGGCTGATATCAGCCAAACAGCAGCTCCAAGTCCAGGGACACAGGCAGACGTCGTACAGTCGAGTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS CCA 90 bp | AAAAATCTGTCTTCCAGTTCTTCACGACTGACACGTGACACTGCCTaGCGAGTCTTCACTGTGCGTGCAGTTGAGGTTTCTTGTAACCCT | + |
Preference number: 5 (lower is better) Translates to: KNLSSSSSRLTRDTA*RVFTVRAVEVSCNP Trigger: AGGGTTACAAGAAACCTCAACTGCACGCACAGTGAAGACTCGCCAGGCAGTGTCACGTGTCAGTCGTGAAGAACTGGAAGACAGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047783.14 ENSMUST00000132757.2 ENSMUST00000139113.8 ENSMUST00000209564.2 |
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CDS-3UTR CAA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATAATTTTATCCTCTTGCTaGCGGGCATGCTGTTTAAGT | + |
Preference number: 5 (lower is better) Translates to: PLRSTEVLWGGSHGEDWIILSSC*RACCLS Trigger: ACTTAAACAGCATGCCCGCAAGCAAGAGGATAAAAT...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS-3UTR CAA 90 bp | TTCTGTGGTCAGATCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATCTGGGCTTCAAGCTTTaGGATGCGTGCAGCCCTGAT | + |
Preference number: 5 (lower is better) Translates to: FCGQIILYWSHRVRQQINLGFKL*DACSPD Trigger: ATCAGGGCTGCACGCATCCAAAAGCTTGAAGCCCAG...ATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGATCTGACCACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS TCA 90 bp | GTACGACGTCTGCCTGTGTCCCTGGACTTGGAGCTGCTGTTTGGCTaGTATCAGCCTGTTTTTGAGAACTTCATTTTGTCTTTCAAGCTC | + |
Preference number: 5 (lower is better) Translates to: VRRLPVSLDLELLFG*YQPVFENFILSFKL Trigger: GAGCTTGAAAGACAAAATGAAGTTCTCAAAAACAGGCTGATATCAGCCAAACAGCAGCTCCAAGTCCAGGGACACAGGCAGACGTCGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS-3UTR CAA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGATCAAACTGTGGGTCATaGCTACTGGGAACGATGGCG | + |
Preference number: 5 (lower is better) Translates to: ERWQESEAENFKASRYKRSNCGS*LLGTMA Trigger: CGCCATCGTTCCCAGTAGCAATGACCCACAGTTTGA...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | CTCCGGGTAAAGGCCTCGCACTATGGGAGTAGTCTGCAGTTCAAAGTCATAGAAATTTTATCCTCTTGCTaGCGGGCATGCTGTTTAAGT | + |
Preference number: 5 (lower is better) Translates to: LRVKASHYGSSLQFKVIEILSSC*RACCLS Trigger: ACTTAAACAGCATGCCCGCAAGCAAGAGGATAAAAT...TTCTATGACTTTGAACTGCAGACTACTCCCATAGTGCGAGGCCTTTACCCGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR CAA 90 bp | AGCTGCTTCTCAAGGCTGCAGCACTTCAGACGCTGCTCCTTAAGCTGCTTGTTCACTAGCCGTATTAACTaGGTGGCCATTCTTTTAATT | + |
Preference number: 5 (lower is better) Translates to: SCFSRLQHFRRCSLSCLFTSRIN*VAILLI Trigger: AATTAAAAGAATGGCCACCAAGTTAATACGGCTAGT...GAACAAGCAGCTTAAGGAGCAGCGTCTGAAGTGCTGCAGCCTTGAGAAGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139113.8 |
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CDS-3UTR CAA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATATCTTCAAGTAAACTATaGCTGTATTTTGTGAGCGTG | + |
Preference number: 5 (lower is better) Translates to: PLRSTEVLWGGSHGEDWISSSKL*LYFVSV Trigger: CACGCTCACAAAATACAGCAATAGTTTACTTGAAGA...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS-3UTR CAA 90 bp | CCACTTAGGAGCACTGAAGTCCTATGGGGTGGCAGTCATGGGGAGGATTGGATATTAATCGTTTCTACATaGTCCCGAATATTTGACCTC | + |
Preference number: 5 (lower is better) Translates to: PLRSTEVLWGGSHGEDWILIVST*SRIFDL Trigger: GAGGTCAAATATTCGGGACAATGTAGAAACGATTAA...TATCCAATCCTCCCCATGACTGCCACCCCATAGGACTTCAGTGCTCCTAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGACTGAGGTCATCAGCATaGATGTCACTCTCCTGGTTG | + |
Preference number: 5 (lower is better) Translates to: ERWQESEAENFKASRYKRLRSSA*MSLSWL Trigger: CAACCAGGAGAGTGACATCAATGCTGATGACCTCAG...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTATCTGTGCTGTGGGCTaGGTGGAGCTCCAGCGTGAC | + |
Preference number: 5 (lower is better) Translates to: LFLSTASHDSGWEFDISTICAVG*VELQRD Trigger: GTCACGCTGGAGCTCCACCAAGCCCACAGCACAGAT...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTTGCTCCTTAAGCTGCTaGTTCAGCTCATCTCCATTG | + |
Preference number: 5 (lower is better) Translates to: SYSTGPTECANKLISYGCCSLSC*FSSSPL Trigger: CAATGGAGATGAGCTGAACAAGCAGCTTAAGGAGCA...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGATTCTGCATGAGTTGCTaGAAGCTCTTTCATGGATCG | + |
Preference number: 5 (lower is better) Translates to: ERWQESEAENFKASRYKRFCMSC*KLFHGS Trigger: CGATCCATGAAAGAGCTTCAAGCAACTCATGCAGAA...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTATTCCTGAGATACACTaGTCATGTGCCAGGGAAATC | + |
Preference number: 5 (lower is better) Translates to: SYSTGPTECANKLISYGCIPEIH*SCAREI Trigger: GATTTCCCTGGCACATGACAAGTGTATCTCAGGAAT...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS GCA 90 bp | TCCTCTTGCTTGCGGGCATGCTGTTTAAGTAAAATGTTCTCATCATaGAAACGCAAAAATCTGTCTTCCAGTTCTTCACGACTGACACGT | + |
Preference number: 5 (lower is better) Translates to: SSCLRACCLSKMFSS*KRKNLSSSSSRLTR Trigger: ACGTGTCAGTCGTGAAGAACTGGAAGACAGATTTTTGCGTTTGCATGATGAGAACATTTTACTTAAACAGCATGCCCGCAAGCAAGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047783.14 ENSMUST00000132757.2 ENSMUST00000139113.8 ENSMUST00000209564.2 |
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CDS-3UTR CAA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCCCATTTCAATATAACTaGGATAGTTCCTGCAGCATG | + |
Preference number: 5 (lower is better) Translates to: PTECANKLISYGCHFKASPFQYN*DSSCSM Trigger: CATGCTGCAGGAACTATCCAAGTTATATTGAAATGG...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | CCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTCATTTCAAAGCCTCCACTAGCCGTATTAACTaGGTGGCCATTCTTTTAATT | + |
Preference number: 5 (lower is better) Translates to: PTECANKLISYGCHFKASTSRIN*VAILLI Trigger: AATTAAAAGAATGGCCACCAAGTTAATACGGCTAGT...GGAGGCTTTGAAATGACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGAATCCTCCCTGGTTATTaGAGAATCATTAAGGTTCAG | + |
Preference number: 5 (lower is better) Translates to: ERWQESEAENFKASRYKRILPGY*RIIKVQ Trigger: CTGAACCTTAATGATTCTCAAATAACCAGGGAGGAT...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | GAACGCTGGCAGGAGTCTGAGGCTGAGAACTTTAAAGCTAGTAGATATAAGAGATGTCTTTTCAAGTTCTaGTACTGTTTCTGCATGAGT | + |
Preference number: 5 (lower is better) Translates to: ERWQESEAENFKASRYKRCLFKF*YCFCMS Trigger: ACTCATGCAGAAACAGTACAAGAACTTGAAAAGACA...TCTCTTATATCTACTAGCTTTAAAGTTCTCAGCCTCAGACTCCTGCCAGCGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTGAAAAGGTGACTTTGTaGATGTGGATTTCAAAGAGA | + |
Preference number: 5 (lower is better) Translates to: SYSTGPTECANKLISYGCEKVTL*MWISKR Trigger: TCTCTTTGAAATCCACATCAACAAAGTCACCTTTTC...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | TCATACTCTACTGGTCCCACAGAGTGCGCCAACAAATTAATATCGTACGGATGTGAAGAAAAGGTGACTTaGTTGATGTGGATTTCAAAG | + |
Preference number: 5 (lower is better) Translates to: SYSTGPTECANKLISYGCEEKVT*LMWISK Trigger: CTTTGAAATCCACATCAACAAAGTCACCTTTTCTTC...ACATCCGTACGATATTAATTTGTTGGCGCACTCTGTGGGACCAGTAGAGTATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS-3UTR CAA 90 bp | AATATTATGGGTCTTAATGACACTGTAGCTGCACAAAGCCAAAGAAAGCTAGAATCTTCTGATGGCTGTTaGGTATTTGTGGAGACAGAA | + |
Preference number: 5 (lower is better) Translates to: NIMGLNDTVAAQSQRKLESSDGC*VFVETE Trigger: TTCTGTCTCCACAAATACCAAACAGCCATCAGAAGA...TTCTAGCTTTCTTTGGCTTTGTGCAGCTACAGTGTCATTAAGACCCATAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS TCA 90 bp | TTATTTCTCCTCTGGCTTCTTCAAGTAAACTATTGCTGTATTTTGTaGGCGTGGGTTGTACAGTTTCTGCTTCATCCACATTTTGAAATC | + |
Preference number: 5 (lower is better) Translates to: LFLLWLLQVNYCCIL*AWVVQFLLHPHFEI Trigger: GATTTCAAAATGTGGATGAAGCAGAAACTGTACAACCCACGCTCACAAAATACAGCAATAGTTTACTTGAAGAAGCCAGAGGAGAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS-3UTR CAA 90 bp | TTATTTTTGTCAACTGCTTCTCATGACAGTGGCTGGGAATTTGACATTTCTACTCTCATGAACTTTTTCTaGCAGCTGCTCAATCATTTC | + |
Preference number: 5 (lower is better) Translates to: LFLSTASHDSGWEFDISTLMNFF*QLLNHF Trigger: GAAATGATTGAGCAGCTGCAAGAAAAAGTTCATGAG...AGTAGAAATGTCAAATTCCCAGCCACTGTCATGAGAAGCAGTTGACAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS CCA 72 bp | GCCTGCACTCGACTGTACGACGTCTGCCTGTGTCCCTaGACTTGGAGCTGCTGTTTGGCTGATATCAGCCTG | + |
Preference number: 6 (lower is better) Translates to: ACTRLYDVCLCP*TWSCCLADISL Trigger: CAGGCTGATATCAGCCAAACAGCAGCTCCAAGTCCAGGGACACAGGCAGACGTCGTACAGTCGAGTGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS GCA 72 bp | AGCTCCTCTACTCTCCTTTCTGAAAACCTCACCGAGTaGAGCTGCTTCTCAAGGCTGCAGCACTTCAGACGC | + |
Preference number: 6 (lower is better) Translates to: SSSTLLSENLTE*SCFSRLQHFRR Trigger: GCGTCTGAAGTGCTGCAGCCTTGAGAAGCAGCTGCACTCGGTGAGGTTTTCAGAAAGGAGAGTAGAGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |
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CDS TCA 72 bp | CAAAAATCTGTCTTCCAGTTCTTCACGACTGACACGTaGCACTGCCTGGCGAGTCTTCACTGTGCGTGCAGT | + |
Preference number: 6 (lower is better) Translates to: QKSVFQFFTTDT*HCLASLHCACS Trigger: ACTGCACGCACAGTGAAGACTCGCCAGGCAGTGTCACGTGTCAGTCGTGAAGAACTGGAAGACAGATTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047783.14 ENSMUST00000132757.2 ENSMUST00000139113.8 ENSMUST00000209564.2 |
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CDS TCA 72 bp | GCAAACGCAAAAATCTGTCTTCCAGTTCTTCACGACTaGCACGTGACACTGCCTGGCGAGTCTTCACTGTGC | + |
Preference number: 6 (lower is better) Translates to: ANAKICLPVLHD*HVTLPGESSLC Trigger: GCACAGTGAAGACTCGCCAGGCAGTGTCACGTGTCAGTCGTGAAGAACTGGAAGACAGATTTTTGCGTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047783.14 ENSMUST00000132757.2 ENSMUST00000139113.8 ENSMUST00000209564.2 |
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CDS GCA 72 bp | CTGTACGACGTCTGCCTGTGTCCCTGGACTTGGAGCTaGTGTTTGGCTGATATCAGCCTGTTTTTGAGAACT | + |
Preference number: 6 (lower is better) Translates to: LYDVCLCPWTWS*CLADISLFLRT Trigger: AGTTCTCAAAAACAGGCTGATATCAGCCAAACAGCAGCTCCAAGTCCAGGGACACAGGCAGACGTCGTACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS CAA 90 bp | CGACTGTACGACGTCTGCCTGTGTCCCTGGACTTGGAGCTGCTGTTaGGCTGATATCAGCCTGTTTTTGAGAACTTCATTTTGTCTTTCA | + |
Preference number: 6 (lower is better) Translates to: RLYDVCLCPWTWSCC*ADISLFLRTSFCLS Trigger: TGAAAGACAAAATGAAGTTCTCAAAAACAGGCTGATATCAGCCAAACAGCAGCTCCAAGTCCAGGGACACAGGCAGACGTCGTACAGTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS TCA 72 bp | CTGCCTGTGTCCCTGGACTTGGAGCTGCTGTTTGGCTaGTATCAGCCTGTTTTTGAGAACTTCATTTTGTCT | + |
Preference number: 6 (lower is better) Translates to: LPVSLDLELLFG*YQPVFENFILS Trigger: AGACAAAATGAAGTTCTCAAAAACAGGCTGATATCAGCCAAACAGCAGCTCCAAGTCCAGGGACACAGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS TCA 72 bp | AGCGTGGGTTGTACAGTTTCTGCTTCATCCACATTTTaGAATCTTAGACCTTTCCCAGGGCATTCCTGCGAG | + |
Preference number: 6 (lower is better) Translates to: SVGCTVSASSTF*NLRPFPGHSCE Trigger: CTCGCAGGAATGCCCTGGGAAAGGTCTAAGATTTCAAAATGTGGATGAAGCAGAAACTGTACAACCCACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047783.14 ENSMUST00000139113.8 |
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CDS TCA 72 bp | ATTAATTCTATCCTGCAGCTCCTCTACTCTCCTTTCTaGAAACCTCACCGAGTGCAGCTGCTTCTCAAGGCT | + |
Preference number: 6 (lower is better) Translates to: INSILQLLYSPF*KPHRVQLLLKA Trigger: AGCCTTGAGAAGCAGCTGCACTCGGTGAGGTTTTCAGAAAGGAGAGTAGAGGAGCTGCAGGATAGAATTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047783.14 |