Pregenerated sensors for RORC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028150Ensembl transcript IDs: ENSMUST00000029795.10, ENSMUST00000197040.5, ENSMUST00000200009.2
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTaGAGGGAGTCCAGGGAGACGGGTCAGAGGGCTGAAGGAAATAGA | + |
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Preference number: 1 (lower is better) Translates to: LGIPPFIECRKGKAG*RESRETGQRAEGNR Trigger: TCTATTTCCTTCAGCCCTCTGACCCGTCTCCCTGGACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR CCA 90 bp | CAACCTCAAGGAAGAGATTGTGTGCCAGAGGGAAAGTCTACAGAATaGTGTCACTGGGGGCAGAGCCTCTGTGTGCTCCACCTGTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: QPQGRDCVPEGKSTE*CHWGQSLCVLHLCG Trigger: TCCACACAGGTGGAGCACACAGAGGCTCTGCCCCCAGTGACACCATTCTGTAGACTTTCCCTCTGGCACACAATCTCTTCCTTGAGGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| 3UTR TCA 90 bp | GGGACAGAGGACAGCTGGAGCTGGGATGAATTCTGGTGTCCTGTATaGATTAGAACCTCAGGCTTCTCAGAGCTGCAACCTCAAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: GTEDSWSWDEFWCPV*IRTSGFSELQPQGR Trigger: TCTTCCTTGAGGTTGCAGCTCTGAGAAGCCTGAGGTTCTAATTCATACAGGACACCAGAATTCATCCCAGCTCCAGCTGTCCTCTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| 3UTR CCA 90 bp | CTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATaGGAAATCAAACATAACAAGCCTTTTCTCCATCACTTGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LSHLPHSFQKPGWNL*EIKHNKPFLHHLLL Trigger: CAGCAGCAAGTGATGGAGAAAAGGCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR GCA 90 bp | AATTCTGGTGTCCTGTATGAATTAGAACCTCAGGCTTCTCAGAGCTaGAACCTCAAGGAAGAGATTGTGTGCCAGAGGGAAAGTCTACAG | + |
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Preference number: 1 (lower is better) Translates to: NSGVLYELEPQASQS*NLKEEIVCQRESLQ Trigger: CTGTAGACTTTCCCTCTGGCACACAATCTCTTCCTTGAGGTTGCAGCTCTGAGAAGCCTGAGGTTCTAATTCATACAGGACACCAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| 3UTR CCA 90 bp | ATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTaGAACTTATGGGAAATCAAACATAACAAGCCTTTTCTCCATCAC | + |
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Preference number: 1 (lower is better) Translates to: ILSLSHLPHSFQKPG*NLWEIKHNKPFLHH Trigger: GTGATGGAGAAAAGGCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGAGATTGTGTGCCAGAGGGAAAGTCTACAGAATGGTGTCACTGGGGGCACTTGCCACCAGTCTCTaGGCTAGATCCATGTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: RKRLCARGKVYRMVSLGALATSL*ARSMSP Trigger: GGGGGACATGGATCTAGCTCAGAGACTGGTGGCAAG...TGCCCCCAGTGACACCATTCTGTAGACTTTCCCTCTGGCACACAATCTCTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| 3UTR-3UTR CCA 90 bp | TGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGACAGAAAGGGAAAGGCTaGGTGAAGGGAGTCCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: WSSYLYPIYPTASRSQGGQKGKG*VKGVQG Trigger: TCCCTGGACTCCCTTCACCCAGCCTTTCCCTTTCTG...TCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR-3UTR CCA 90 bp | CCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGCAGAAAGGGAAAGGCTaGGTGAAGGGAGTCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PISIPSTPQLPEARVELMQKGKG*VKGVQG Trigger: TCCCTGGACTCCCTTCACCCAGCCTTTCCCTTTCTG...CATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR-3UTR CCA 90 bp | TATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGCAGAAAGGGAAAGGCTaGGTGAAGGGAGTCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: YLYPIYPTASRSQGGTYGQKGKG*VKGVQG Trigger: TCCCTGGACTCCCTTCACCCAGCCTTTCCCTTTCTG...CCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGTTCTCCATCACTTGCTaGTGTTGTCCTACAAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LGHPISIPSTPQLPEARVFSITC*CCPTRQ Trigger: TTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAA...CACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTATTTGACTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGACCACCCTTCATAGAGTaGAGAAAGGGAAAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: FYLTWSSYLYPIYPTASRPPFIE*RKGKAG Trigger: CCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGG...TCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAGTCAAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR-3UTR GCA 90 bp | TCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACCAGTCTCTGAGTTCTCCATCACTTGCTaGTGTTGTCCTACAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: SIFLLYTGPSGGLPPVSEFSITC*CCPTRQ Trigger: TTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAA...CTCAGAGACTGGTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| 3UTR-3UTR CCA 90 bp | ATGAATTCTGGTGTCCTGTATGAATTAGAACCTCAGGCTTCTCAGAGCTGCAACATAAAACAGTTATCTTaGGACCTTATCTCCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: MNSGVLYELEPQASQSCNIKQLS*DLISTP Trigger: TGGGGTGGAGATAAGGTCCCAAGATAACTGTTTTAT...GTTGCAGCTCTGAGAAGCCTGAGGTTCTAATTCATACAGGACACCAGAATTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| 3UTR CCA 72 bp | GATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTaGGTGAAGGGAGTCCAGGGAGACGGGTCAGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: DTTLHRVQKGKG*VKGVQGDGSEG Trigger: GCCCTCTGACCCGTCTCCCTGGACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR CCA 72 bp | GGAAGAGATTGTGTGCCAGAGGGAAAGTCTACAGAATaGTGTCACTGGGGGCAGAGCCTCTGTGTGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GRDCVPEGKSTE*CHWGQSLCVLH Trigger: GTGGAGCACACAGAGGCTCTGCCCCCAGTGACACCATTCTGTAGACTTTCCCTCTGGCACACAATCTCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| 3UTR-3UTR CAA 90 bp | CTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGCCTTTTCTCCATCACTaGCTGCTGTTGTCCTACAAG | + |
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Preference number: 3 (lower is better) Translates to: LGHPISIPSTPQLPEARVPFLHH*LLLSYK Trigger: CTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGG...CACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGCCTTTTCTCCATCACTaGCTGCTGTTGTCCTACAAG | + |
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Preference number: 3 (lower is better) Translates to: LVILSLSHLPHSFQKPGWPFLHH*LLLSYK Trigger: CTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGG...CCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR GCA 72 bp | GTCCTGTATGAATTAGAACCTCAGGCTTCTCAGAGCTaGAACCTCAAGGAAGAGATTGTGTGCCAGAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: VLYELEPQASQS*NLKEEIVCQRE Trigger: TTCCCTCTGGCACACAATCTCTTCCTTGAGGTTGCAGCTCTGAGAAGCCTGAGGTTCTAATTCATACAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| 3UTR-3UTR CAA 90 bp | TTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACCAGTCTCTGAGCTAGATCCTTTTCTCCATCACTaGCTGCTGTTGTCCTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: FLLYTGPSGGLPPVSELDPFLHH*LLLSYK Trigger: CTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGG...ATCTAGCTCAGAGACTGGTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| 3UTR CCA 72 bp | CTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATaGGAAATCAAACATAACAAGCCTTTTCTCCATCAC | + |
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Preference number: 3 (lower is better) Translates to: LPHSFQKPGWNL*EIKHNKPFLHH Trigger: GTGATGGAGAAAAGGCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| 3UTR CCA 72 bp | CTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTaGAACTTATGGGAAATCAAACATAACAAGCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: LSHLPHSFQKPG*NLWEIKHNKPF Trigger: AAAAGGCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | TCCAGGGAGACGGGTCAGAGGGCTGAAGGAAATAGAAAGTTGTCCTTCCTCCAGGGAGGGAAGGCGGCTTaGACCACGATGGGGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SRETGQRAEGNRKLSFLQGGKAA*TTMGWR Trigger: CCTCCACCCCATCGTGGTCCAAGCCGCCTTCCCTCC...CTGGAGGAAGGACAACTTTCTATTTCCTTCAGCCCTCTGACCCGTCTCCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | AGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCGCCACATTACACTGCTaGCTGCGGCGGAAGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: RDTTLHRVQKGKGWVKGVATLHC*LRRKKP Trigger: GGGCTTCTTCCGCCGCAGCCAGCAGTGTAATGTGGC...GACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | CTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGGCTGGTTCGGTCAATaGGGCAGTTCTGCTGACGCG | + |
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Preference number: 4 (lower is better) Translates to: LGHPISIPSTPQLPEARVGWFGQ*GSSADA Trigger: CGCGTCAGCAGAACTGCCCCATTGACCGAACCAGCC...CACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | TTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGTGCAGGCGGCAATGCTaGCATCGGTTGCGGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LVILSLSHLPHSFQKPGWCRRQC*HRLRLV Trigger: AACCAGCCGCAACCGATGCCAGCATTGCCGCCTGCA...CCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | GGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAATGGCAGGAGGCCCCCTaGACCTCTGTTTTGGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: GHPISIPSTPQLPEARVEWQEAP*TSVLAK Trigger: CTTGGCCAAAACAGAGGTCCAGGGGGCCTCCTGCCA...TTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | CTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCGCCTCAGTGAGGTGGTaGGCACAGCGCTCCCACATC | + |
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Preference number: 4 (lower is better) Translates to: LSHLPHSFQKPGWNLWEIASVRW*AQRSHI Trigger: GATGTGGGAGCGCTGTGCCCACCACCTCACTGAGGC...GATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | TGCTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGGCCTCAGTGAGGTGGTaGGCACAGCGCTCCCACATC | + |
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Preference number: 4 (lower is better) Translates to: CLLLGIPPFIECRKGKAGASVRW*AQRSHI Trigger: GATGTGGGAGCGCTGTGCCCACCACCTCACTGAGGC...CCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR TCA 90 bp | CTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGACTGAATGGCCTCAGTaGGGTGGTGGGCACAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LTPRDTTLHRVQKGKGWVTEWPQ*GGGHSA Trigger: AGCGCTGTGCCCACCACCTCACTGAGGCCATTCAGT...CACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR TCA 90 bp | TCCAGGGAGACGGGTCAGAGGGCTGAAGGAAATAGAAAGTTGTCCTTCCTCCAGTCTGGCAGAGCTCCATaGAGCCTGAAAGCCGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SRETGQRAEGNRKLSFLQSGRAP*SLKAAW Trigger: CCAAGCGGCTTTCAGGCTTCATGGAGCTCTGCCAGA...CTGGAGGAAGGACAACTTTCTATTTCCTTCAGCCCTCTGACCCGTCTCCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR GCA 90 bp | GTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACCAGCATCTCGGGACATaGCCAGAGCCAGGCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: VILSLSHLPHSFQKPGWNQHLGT*PEPGTS Trigger: AGAAGTGCCTGGCTCTGGGCATGTCCCGAGATGCTG...GTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR GCA 90 bp | TCCAGGGAGACGGGTCAGAGGGCTGAAGGAAATAGAAAGTTGTCCTTCCTCCAGCAGCATCTCGGGACATaGCCAGAGCCAGGCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: SRETGQRAEGNRKLSFLQQHLGT*PEPGTS Trigger: AGAAGTGCCTGGCTCTGGGCATGTCCCGAGATGCTG...CTGGAGGAAGGACAACTTTCTATTTCCTTCAGCCCTCTGACCCGTCTCCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR GCA 90 bp | GATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCCAGCAGCATCTCGGGACATaGCCAGAGCCAGGCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: DTTLHRVQKGKGWVKGVQQHLGT*PEPGTS Trigger: AGAAGTGCCTGGCTCTGGGCATGTCCCGAGATGCTG...CTGGACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | CTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGGCCACATTACACTGCTaGCTGCGGCGGAAGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LTPRDTTLHRVQKGKGWVATLHC*LRRKKP Trigger: GGGCTTCTTCCGCCGCAGCCAGCAGTGTAATGTGGC...CACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | CCTTTTCTCCATCACTTGCTGCTGTTGTCCTACAAGGCAAGCCTAGGGGCAGAAGCCACATTACACTGCTaGCTGCGGCGGAAGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: PFLHHLLLLSYKASLGAEATLHC*LRRKKP Trigger: GGGCTTCTTCCGCCGCAGCCAGCAGTGTAATGTGGC...TTCTGCCCCTAGGCTTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | TGCTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGCAGGCGGCAATGCTaGCATCGGTTGCGGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: CLLLGIPPFIECRKGKAGCRRQC*HRLRLV Trigger: AACCAGCCGCAACCGATGCCAGCATTGCCGCCTGCA...CCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | CCTTTTCTCCATCACTTGCTGCTGTTGTCCTACAAGGCAAGCCTAGGGGCAGAATGGCAGGAGGCCCCCTaGACCTCTGTTTTGGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PFLHHLLLLSYKASLGAEWQEAP*TSVLAK Trigger: CTTGGCCAAAACAGAGGTCCAGGGGGCCTCCTGCCA...TTCTGCCCCTAGGCTTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | ACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCCAGGGAAATGCAGTGGCTGTCTaGACCCTGTTCTGGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: TTLHRVQKGKGWVKGVQGNAVAV*TLFWFP Trigger: GGGGAACCAGAACAGGGTCCAGACAGCCACTGCATT...TCCCTGGACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | GTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTGGACCACGATGGGGTaGAGGTGCTGGAAGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: VILSLSHLPHSFQKPGWNWTTMG*RCWKIC Trigger: GCAGATCTTCCAGCACCTCCACCCCATCGTGGTCCA...GTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | GATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCCAGTGGACCACGATGGGGTaGAGGTGCTGGAAGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: DTTLHRVQKGKGWVKGVQWTTMG*RCWKIC Trigger: GCAGATCTTCCAGCACCTCCACCCCATCGTGGTCCA...CTGGACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR TCA 90 bp | CTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAGCTCCATGAAGCCTaGAAGCCGCTTGGCAAACTC | + |
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Preference number: 4 (lower is better) Translates to: LGHPISIPSTPQLPEARVELHEA*KPLGKL Trigger: GAGTTTGCCAAGCGGCTTTCAGGCTTCATGGAGCTC...CACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR GCA 90 bp | TTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAATGCTGGCATCGGTTaGGGCTGGTTCGGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LVILSLSHLPHSFQKPGWNAGIG*GWFGQW Trigger: CCATTGACCGAACCAGCCGCAACCGATGCCAGCATT...CCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAAAGAGGTTGGTGCGCTaGCGTAGAAGGTCCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WSSYLYPIYPTASRSQGGKRLVR*RRRSSS Trigger: ACTGGAGGACCTTCTACGGCAGCGCACCAACCTCTT...TCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | TCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATTGCAGGCGGCAATGCTaGCATCGGTTGCGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SIPSTPQLPEARVELMGNCRRQC*HRLRLV Trigger: AACCAGCCGCAACCGATGCCAGCATTGCCGCCTGCA...ATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | GATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCCAGAATGCAGTGGCTGTCTaGACCCTGTTCTGGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DTTLHRVQKGKGWVKGVQNAVAV*TLFWFP Trigger: GGGGAACCAGAACAGGGTCCAGACAGCCACTGCATT...CTGGACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAATGCAGTGGCTGTCTaGACCCTGTTCTGGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVILSLSHLPHSFQKPGWNAVAV*TLFWFP Trigger: GGGGAACCAGAACAGGGTCCAGACAGCCACTGCATT...CCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTTTCTCCATCACTTGCTGCTGTTGTCCTACAAGGCAAGCCTAGGGGCAGAGGGCACTGCAGAAACTaGGAATGCAGTGGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AFSPSLAAVVLQGKPRGRGHCRN*ECSGCL Trigger: CAGACAGCCACTGCATTCCCAGTTTCTGCAGTGCCC...TCTGCCCCTAGGCTTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | TTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGGGGCACTGCAGAAACTaGGAATGCAGTGGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVILSLSHLPHSFQKPGWGHCRN*ECSGCL Trigger: CAGACAGCCACTGCATTCCCAGTTTCTGCAGTGCCC...CCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGGACCACGATGGGGTaGAGGTGCTGGAAGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLLGIPPFIECRKGKAGWTTMG*RCWKIC Trigger: GCAGATCTTCCAGCACCTCCACCCCATCGTGGTCCA...CCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR TCA 90 bp | GATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCCAGAACTCCACCACATACTaGATGGCCTCAGTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DTTLHRVQKGKGWVKGVQNSTTY*MASVRW Trigger: CCACCTCACTGAGGCCATTCAGTATGTGGTGGAGTT...CTGGACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR TCA 90 bp | CTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGGAGCTCCATGAAGCCTaGAAGCCGCTTGGCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LTPRDTTLHRVQKGKGWVELHEA*KPLGKL Trigger: GAGTTTGCCAAGCGGCTTTCAGGCTTCATGGAGCTC...CACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR GCA 90 bp | CTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAATGCTGGCATCGGTTaGGGCTGGTTCGGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLPHSFQKPGWNLWEINAGIG*GWFGQW Trigger: CCATTGACCGAACCAGCCGCAACCGATGCCAGCATT...GATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | CCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGTTCTGCAGGCGGCAATaGTGGCATCGGTTGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHSFQKPGWNLWEIKHNKFCRRQ*WHRLRL Trigger: CAGCCGCAACCGATGCCAGCATTGCCGCCTGCAGAA...CTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | GATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCCAGTGCAGAAACTGGGAATaGAGTGGCTGTCTGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTTLHRVQKGKGWVKGVQCRNWE*SGCLDP Trigger: AGGGTCCAGACAGCCACTGCATTCCCAGTTTCTGCA...CTGGACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | AGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCTGCAGAAACTGGGAATaGAGTGGCTGTCTGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDTTLHRVQKGKGWVKGVCRNWE*SGCLDP Trigger: AGGGTCCAGACAGCCACTGCATTCCCAGTTTCTGCA...GACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR GCA 90 bp | TGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAGTACCTCTGGGGCACTaGAGAAACTGGGAATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WSSYLYPIYPTASRSQGGVPLGH*RNWECS Trigger: ACTGCATTCCCAGTTTCTGCAGTGCCCCAGAGGTAC...TCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | CCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGCGGCTGGTTCGGTCAATaGGGCAGTTCTGCTGACGCG | + |
|
Preference number: 4 (lower is better) Translates to: PTASRSQGGTYGKSNITSGWFGQ*GSSADA Trigger: CGCGTCAGCAGAACTGCCCCATTGACCGAACCAGCC...GCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGAGATTGTGTGCCAGAGGGAAAGTCTACAGAATGGTGTCACTGGGGGCAGGGCACTGCAGAAACTaGGAATGCAGTGGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKRLCARGKVYRMVSLGAGHCRN*ECSGCL Trigger: CAGACAGCCACTGCATTCCCAGTTTCTGCAGTGCCC...TGCCCCCAGTGACACCATTCTGTAGACTTTCCCTCTGGCACACAATCTCTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
||
| CDS-3UTR CCA 90 bp | TTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACCAGTCTCTGAGCTAGATATGGCCTCAGTGAGGTaGTGGGCACAGCGCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLLYTGPSGGLPPVSELDMASVR*WAQRSH Trigger: GTGGGAGCGCTGTGCCCACCACCTCACTGAGGCCAT...ATCTAGCTCAGAGACTGGTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | GCCTTTTCTCCATCACTTGCTGCTGTTGTCCTACAAGGCAAGCCTAGGGGCAGAAGCTTTTCCACATGTTaGCTGCACAGGCTCCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AFSPSLAAVVLQGKPRGRSFSTC*LHRLRS Trigger: ACTCCGGAGCCTGTGCAGCCAACATGTGGAAAAGCT...TCTGCCCCTAGGCTTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | ATGAATTCTGGTGTCCTGTATGAATTAGAACCTCAGGCTTCTCAGAGCTGCAACGGAGGGAAGGCGGCTTaGACCACGATGGGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MNSGVLYELEPQASQSCNGGKAA*TTMGWR Trigger: CCTCCACCCCATCGTGGTCCAAGCCGCCTTCCCTCC...GTTGCAGCTCTGAGAAGCCTGAGGTTCTAATTCATACAGGACACCAGAATTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | CTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAGTTCCTTATAGAGTaGAGGGAAGGCGGCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGHPISIPSTPQLPEARVEFLIE*REGGLD Trigger: GTCCAAGCCGCCTTCCCTCCACTCTATAAGGAACTC...CACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | CCTTTTCTCCATCACTTGCTGCTGTTGTCCTACAAGGCAAGCCTAGGGGCAGAAGCTTCCTCTGGTAGCTaGTCACCTCCTCCCGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PFLHHLLLLSYKASLGAEASSGS*SPPPVK Trigger: TTTCACGGGAGGAGGTGACCAGCTACCAGAGGAAGC...TTCTGCCCCTAGGCTTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200009.2 |
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| CDS-3UTR TCA 90 bp | ACTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTCCACATCTCCCACATTaGCTTCCTCTGGTAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWSSYLYPIYPTASRSQGPHLPH*LPLVAG Trigger: ACCAGCTACCAGAGGAAGTCAATGTGGGAGATGTGG...ACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR GCA 90 bp | CCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGGGTGTGGGTCTTCTTTaGAGCCAGCAGCTCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHSFQKPGWNLWEIKHNKGVGLL*SQQLPR Trigger: TCTCGGGAGCTGCTGGCTGCAAAGAAGACCCACACC...CTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029795.10 |
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| CDS-3UTR GCA 90 bp | CTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAGTTCTGCTGACGCGTaGAGGAGTAGGCCACATTAC | + |
|
Preference number: 4 (lower is better) Translates to: LTPRDTTLHRVQKGKGWVSSADA*RSRPHY Trigger: GTAATGTGGCCTACTCCTGCACGCGTCAGCAGAACT...CACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | TACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACATGGCAGGAGGCCCCCTaGACCTCTGTTTTGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YPTASRSQGGTYGKSNITWQEAP*TSVLAK Trigger: CTTGGCCAAAACAGAGGTCCAGGGGGCCTCCTGCCA...TGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | ACTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGTCTGGACCCTGTTCTaGTTCCCCAAGTTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TWSSYLYPIYPTASRSQGVWTLF*FPKFRM Trigger: CATCCTGAACTTGGGGAACCAGAACAGGGTCCAGAC...ACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | CTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGACTTCCTCTGGTAGCTaGTCACCTCCTCCCGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTPRDTTLHRVQKGKGWVTSSGS*SPPPVK Trigger: TTTCACGGGAGGAGGTGACCAGCTACCAGAGGAAGT...CACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | TGCTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTCCGGAGTTTTCCTTTaGGTGGCAGCTTGGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLLLGIPPFIECRKGKAGSGVFL*VAAWLG Trigger: TCCTAGCCAAGCTGCCACCCAAAGGAAAACTCCGGA...CCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | ACTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTTCCGGAGTTTTCCTTTaGGTGGCAGCTTGGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWSSYLYPIYPTASRSQGSGVFL*VAAWLG Trigger: TCCTAGCCAAGCTGCCACCCAAAGGAAAACTCCGGA...ACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | TATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAGCTTTTCCACATGTTaGCTGCACAGGCTCCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YLYPIYPTASRSQGGTYGSFSTC*LHRLRS Trigger: ACTCCGGAGCCTGTGCAGCCAACATGTGGAAAAGCT...CCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | AGTCTCAGGAATCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACGGAGGGAAGGCGGCTTaGACCACGATGGGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRNLYSYYIQVLLGACHGGKAA*TTMGWR Trigger: CCTCCACCCCATCGTGGTCCAAGCCGCCTTCCCTCC...GTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGATTCCTGAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR TCA 90 bp | CTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGGTAGTGGATCCCAGATaGCTTGTCCCCACAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTPRDTTLHRVQKGKGWVVVDPR*LVPTDL Trigger: AAGATCTGTGGGGACAAGTCATCTGGGATCCACTAC...CACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR TCA 90 bp | TGCTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGGTAGTGGATCCCAGATaGCTTGTCCCCACAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLLGIPPFIECRKGKAGVVDPR*LVPTDL Trigger: AAGATCTGTGGGGACAAGTCATCTGGGATCCACTAC...CCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR GCA 90 bp | TCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATAGTTCTGCTGACGCGTaGAGGAGTAGGCCACATTAC | + |
|
Preference number: 4 (lower is better) Translates to: SIPSTPQLPEARVELMGNSSADA*RSRPHY Trigger: GTAATGTGGCCTACTCCTGCACGCGTCAGCAGAACT...ATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | CCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGAATGCTGGCATCGGTTaGGGCTGGTTCGGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PHSFQKPGWNLWEIKHNKNAGIG*GWFGQW Trigger: CCATTGACCGAACCAGCCGCAACCGATGCCAGCATT...CTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | TCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACCAGTCTCTGAGTTCTGCAGGCGGCAATaGTGGCATCGGTTGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIFLLYTGPSGGLPPVSEFCRRQ*WHRLRL Trigger: CAGCCGCAACCGATGCCAGCATTGCCGCCTGCAGAA...CTCAGAGACTGGTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR GCA 90 bp | CCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGCCACTTGTTCCTGTTaGTGCTGCTGTTGCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PISIPSTPQLPEARVELMATCSC*CCCCSC Trigger: ACAACTGCAACAGCAGCAGCAACAGGAACAAGTGGC...CATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGCCACTTGTTCCTGTTaGTGCTGCTGTTGCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TWSSYLYPIYPTASRSQGATCSC*CCCCSC Trigger: ACAACTGCAACAGCAGCAGCAACAGGAACAAGTGGC...ACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | TATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGGCCACTTGTTCCTGTTaGTGCTGCTGTTGCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YLYPIYPTASRSQGGTYGATCSC*CCCCSC Trigger: ACAACTGCAACAGCAGCAGCAACAGGAACAAGTGGC...CCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | TTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGTCCCCAAGTTCAGGATaGCTGGTTTCCTCAAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: LVILSLSHLPHSFQKPGWSPSSG*LVSSKR Trigger: TCGTTTTGAGGAAACCAGGCATCCTGAACTTGGGGA...CCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGATCCCCAAGTTCAGGATaGCTGGTTTCCTCAAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: WSSYLYPIYPTASRSQGGSPSSG*LVSSKR Trigger: TCGTTTTGAGGAAACCAGGCATCCTGAACTTGGGGA...TCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | GTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACAGGTGCTGGAAGATCTaGAGCTTTTCCACATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VILSLSHLPHSFQKPGWNRCWKI*SFSTCW Trigger: CCAACATGTGGAAAAGCTGCAGATCTTCCAGCACCT...GTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTTCTCCATCACTTGCTGCTGTTGTCCTACAAGGCAAGCCTAGGGGCAGAAGCTTTGCCTCGTTCTaGACTATACTCAAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AFSPSLAAVVLQGKPRGRSFASF*TILKVA Trigger: TGCCACCTTGAGTATAGTCCAGAACGAGGCAAAGCT...TCTGCCCCTAGGCTTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGAGCTTTGCCTCGTTCTaGACTATACTCAAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGHPISIPSTPQLPEARVSFASF*TILKVA Trigger: TGCCACCTTGAGTATAGTCCAGAACGAGGCAAAGCT...CACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACGGCATATGGTACCTCTaGGGCACTGCAGAAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPHSFQKPGWNLWEIKHNGIWYL*GTAETG Trigger: CCCAGTTTCTGCAGTGCCCCAGAGGTACCATATGCC...GTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | CCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGGGCATATGGTACCTCTaGGGCACTGCAGAAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHSFQKPGWNLWEIKHNKGIWYL*GTAETG Trigger: CCCAGTTTCTGCAGTGCCCCAGAGGTACCATATGCC...CTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | CTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAGACTGTGTGGTTGTTaGCATTGTAGGCCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLPHSFQKPGWNLWEIRLCGC*HCRPCT Trigger: TGTGCAGGGCCTACAATGCCAACAACCACACAGTCT...GATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR CCA 90 bp | TCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATGAGTTCCTTATAGAGTaGAGGGAAGGCGGCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SIPSTPQLPEARVELMGNEFLIE*REGGLD Trigger: GTCCAAGCCGCCTTCCCTCCACTCTATAAGGAACTC...ATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | CCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGAGTTTTCCTTTGGGTaGCAGCTTCCTCTGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PISIPSTPQLPEARVELMEFSFG*QLPLVA Trigger: AGCTACCAGAGGAAGCTGCCACCCAAAGGAAAACTC...CATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200009.2 |
||
| CDS-3UTR TCA 90 bp | AGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCCTGCTTTCAGTAGTATaGTCTGGTCATTCTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RDTTLHRVQKGKGWVKGVLLSVV*SGHSGR Trigger: TCTGCCAGAATGACCAGATCATACTACTGAAAGCAG...GACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR GCA 90 bp | TATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGCGTCAGTGCTATAGATaGTGTCTCTGCCTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLYPIYPTASRSQGGTYGRQCYR*CLCLQL Trigger: AAGCTGAAGGCAGAGACAGCATCTATAGCACTGACG...CCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | CTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACGTACCTCTGGGGCACTaGAGAAACTGGGAATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPHSFQKPGWNLWEIKHNVPLGH*RNWECS Trigger: ACTGCATTCCCAGTTTCTGCAGTGCCCCAGAGGTAC...GTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | TTTTATTTGACTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAGGCTGGTTCGGTCAATaGGGCAGTTCTGCTGACGCG | + |
|
Preference number: 4 (lower is better) Translates to: FYLTWSSYLYPIYPTASRGWFGQ*GSSADA Trigger: CGCGTCAGCAGAACTGCCCCATTGACCGAACCAGCC...TCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAGTCAAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGAGACGGGTCAGAGGGCTGAAGGAAATAGAAAGTTGTCCTTCCTCCAGTTCAGTAGTATGATCTaGTCATTCTGGCAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRETGQRAEGNRKLSFLQFSSMI*SFWQSS Trigger: GGAGCTCTGCCAGAATGACCAGATCATACTACTGAA...CTGGAGGAAGGACAACTTTCTATTTCCTTCAGCCCTCTGACCCGTCTCCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| 3UTR CAA 72 bp | CTCAGGCTTCTCAGAGCTGCAACCTCAAGGAAGAGATaGTGTGCCAGAGGGAAAGTCTACAGAATGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLLRAATSRKR*CARGKVYRMVS Trigger: TGACACCATTCTGTAGACTTTCCCTCTGGCACACAATCTCTTCCTTGAGGTTGCAGCTCTGAGAAGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| CDS-3UTR TCA 90 bp | ACAGTTATCTTGGGACCTTATCTCCACCCCACCCTCATTCTTTACACATCCAGGGTAGTGGATCCCAGATaGCTTGTCCCCACAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVILGPYLHPTLILYTSRVVDPR*LVPTDL Trigger: AAGATCTGTGGGGACAAGTCATCTGGGATCCACTAC...CCTGGATGTGTAAAGAATGAGGGTGGGGTGGAGATAAGGTCCCAAGATAACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| CDS-3UTR TCA 90 bp | TTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACCAGTCTCTGAGCTAGATCCACATCTCCCACATTaGCTTCCTCTGGTAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLLYTGPSGGLPPVSELDPHLPH*LPLVAG Trigger: ACCAGCTACCAGAGGAAGTCAATGTGGGAGATGTGG...ATCTAGCTCAGAGACTGGTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR GCA 90 bp | GCCTTTTCTCCATCACTTGCTGCTGTTGTCCTACAAGGCAAGCCTAGGGGCAGATGTCCCCACAGATCTTaGAAGGGATCACTTCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: AFSPSLAAVVLQGKPRGRCPHRS*KGSLQF Trigger: AAATTGAAGTGATCCCTTGCAAGATCTGTGGGGACA...TCTGCCCCTAGGCTTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | TTTTATTTGACTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGACATTACACTGCTGGCTaGGGCGGAAGAAGCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FYLTWSSYLYPIYPTASRHYTAG*GGRSPC Trigger: GCAAGGGCTTCTTCCGCCGCAGCCAGCAGTGTAATG...TCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAGTCAAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR GCA 90 bp | TACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGTTCTGCTGACGCGTaGAGGAGTAGGCCACATTAC | + |
|
Preference number: 4 (lower is better) Translates to: YPTASRSQGGTYGKSNITSSADA*RSRPHY Trigger: GTAATGTGGCCTACTCCTGCACGCGTCAGCAGAACT...TGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR GCA 90 bp | CTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCTATAGATGCTGTCTCTaGCTTCAGCTTTGCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSHLPHSFQKPGWNLWEIYRCCL*LQLCLV Trigger: AACGAGGCAAAGCTGAAGGCAGAGACAGCATCTATA...GATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR GCA 90 bp | TCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCGTCAGTGCTATAGATaGTGTCTCTGCCTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIPSTPQLPEARVELMGNRQCYR*CLCLQL Trigger: AAGCTGAAGGCAGAGACAGCATCTATAGCACTGACG...ATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTTTCTCCATCACTTGCTGCTGTTGTCCTACAAGGCAAGCCTAGGGGCAGACTTGTCGATGAGTCTTaGAGAGATGATGATGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AFSPSLAAVVLQGKPRGRLVDES*RDDDGK Trigger: CTTTCCATCATCATCTCTGCAAGACTCATCGACAAG...TCTGCCCCTAGGCTTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | AAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCCAGGTATCCCGAGATGTCCGGTaGTGTCTCTGTGGGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLAFKPRFEFSLSQVSRDVR*CLCGAL Trigger: CAGGGCCCCACAGAGACACCACCGGACATCTCGGGA...TACCTGGGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029795.10 |
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| CDS-3UTR CCA 90 bp | CTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCCAAGTTCAGGATGCCTaGTTTCCTCAAAACGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHLPHSFQKPGWNLWEIQVQDA*FPQNEV Trigger: GACTTCGTTTTGAGGAAACCAGGCATCCTGAACTTG...GATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | AAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCCAGGTAATGGCCTCAGTGAGGTaGTGGGCACAGCGCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLAFKPRFEFSLSQVMASVR*WAQRSH Trigger: GTGGGAGCGCTGTGCCCACCACCTCACTGAGGCCAT...TACCTGGGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | TACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGCTTTTCCACATGTTaGCTGCACAGGCTCCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YPTASRSQGGTYGKSNITSFSTC*LHRLRS Trigger: ACTCCGGAGCCTGTGCAGCCAACATGTGGAAAAGCT...TGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR TCA 90 bp | GCTTCTCAGAGCTGCAACCTCAAGGAAGAGATTGTGTGCCAGAGGGAAAGTCTACTGCTTTCAGTAGTATaGTCTGGTCATTCTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASQSCNLKEEIVCQRESLLLSVV*SGHSGR Trigger: TCTGCCAGAATGACCAGATCATACTACTGAAAGCAG...TAGACTTTCCCTCTGGCACACAATCTCTTCCTTGAGGTTGCAGCTCTGAGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| CDS-3UTR GCA 90 bp | AAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCCAGGTATTCTGCAGGCGGCAATaGTGGCATCGGTTGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLAFKPRFEFSLSQVFCRRQ*WHRLRL Trigger: CAGCCGCAACCGATGCCAGCATTGCCGCCTGCAGAA...TACCTGGGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR GCA 90 bp | TATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGTGTTGCAGTTGTTTCTaGACTTCTGCATGTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: YLYPIYPTASRSQGGTYGCCSCF*TSACRL Trigger: CAGTCTACATGCAGAAGTGCAGAAACAACTGCAACA...CCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR GCA 90 bp | CTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACCTCTGCCTTCAGCTTTaGCTCGTTCTGGACTATACT | + |
|
Preference number: 4 (lower is better) Translates to: LPHSFQKPGWNLWEIKHNLCLQL*LVLDYT Trigger: AGTATAGTCCAGAACGAGGCAAAGCTGAAGGCAGAG...GTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR GCA 90 bp | CCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGCCTCTGCCTTCAGCTTTaGCTCGTTCTGGACTATACT | + |
|
Preference number: 4 (lower is better) Translates to: PTASRSQGGTYGKSNITSLCLQL*LVLDYT Trigger: AGTATAGTCCAGAACGAGGCAAAGCTGAAGGCAGAG...GCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGTGGAACTTATGGGAAATCAAACATAACAAGCCTTTTCTCCATCACTTGCAAGAGGTTGGTGCGCTaGCGTAGAAGGTCCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QGGTYGKSNITSLFSITCKRLVR*RRRSSS Trigger: ACTGGAGGACCTTCTACGGCAGCGCACCAACCTCTT...GCAAGTGATGGAGAAAAGGCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR GCA 90 bp | CCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGCAGGTGCTGGAAGATCTaGAGCTTTTCCACATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTASRSQGGTYGKSNITSRCWKI*SFSTCW Trigger: CCAACATGTGGAAAAGCTGCAGATCTTCCAGCACCT...GCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | CCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGCAGCTTTGCCTCGTTCTaGACTATACTCAAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTASRSQGGTYGKSNITSSFASF*TILKVA Trigger: TGCCACCTTGAGTATAGTCCAGAACGAGGCAAAGCT...GCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGTCTCAGGAATCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTACTGAATGGCCTCAGTaGGGTGGTGGGCACAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKVSGIYILIIYRSFWGLTEWPQ*GGGHSA Trigger: AGCGCTGTGCCCACCACCTCACTGAGGCCATTCAGT...AAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGATTCCTGAGACTTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
||
| CDS-3UTR TCA 90 bp | TTTTATTTGACTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAACTCCACCACATACTaGATGGCCTCAGTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FYLTWSSYLYPIYPTASRNSTTY*MASVRW Trigger: CCACCTCACTGAGGCCATTCAGTATGTGGTGGAGTT...TCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAGTCAAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR GCA 90 bp | TCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATTGTCCCCACAGATCTTaGAAGGGATCACTTCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: SIPSTPQLPEARVELMGNCPHRS*KGSLQF Trigger: AAATTGAAGTGATCCCTTGCAAGATCTGTGGGGACA...ATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | TACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACACTCTGCCTTCAGCTTTaGCTCGTTCTGGACTATACT | + |
|
Preference number: 4 (lower is better) Translates to: YPTASRSQGGTYGKSNITLCLQL*LVLDYT Trigger: AGTATAGTCCAGAACGAGGCAAAGCTGAAGGCAGAG...TGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | CCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGCTATAGATGCTGTCTCTaGCTTCAGCTTTGCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTASRSQGGTYGKSNITSYRCCL*LQLCLV Trigger: AACGAGGCAAAGCTGAAGGCAGAGACAGCATCTATA...GCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR GCA 90 bp | TTTTATTTGACTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAGTACCTCTGGGGCACTaGAGAAACTGGGAATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FYLTWSSYLYPIYPTASRVPLGH*RNWECS Trigger: ACTGCATTCCCAGTTTCTGCAGTGCCCCAGAGGTAC...TCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAGTCAAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CCA 90 bp | TTTTATTTGACTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAGTCTGGACCCTGTTCTaGTTCCCCAAGTTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FYLTWSSYLYPIYPTASRVWTLF*FPKFRM Trigger: CATCCTGAACTTGGGGAACCAGAACAGGGTCCAGAC...TCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAGTCAAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| 3UTR CAA 72 bp | TGGGAAATCAAACATAACAAGCCTTTTCTCCATCACTaGCTGCTGTTGTCCTACAAGGCAAGCCTAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WEIKHNKPFLHH*LLLSYKASLGA Trigger: TGCCCCTAGGCTTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGGCTTGTTATGTTTGATTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGTCTCAGGAATCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTTCTGGCAGAGCTCCATaGAGCCTGAAAGCCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVSGIYILIIYRSFWGLSGRAP*SLKAAW Trigger: CCAAGCGGCTTTCAGGCTTCATGGAGCTCTGCCAGA...AAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGATTCCTGAGACTTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| CDS-3UTR GCA 90 bp | CTCAGGAATCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACCAGTCCCCAAGTTCAGGATaGCTGGTTTCCTCAAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: LRNLYSYYIQVLLGACHQSPSSG*LVSSKR Trigger: TCGTTTTGAGGAAACCAGGCATCCTGAACTTGGGGA...CTGGTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGATTCCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR GCA 90 bp | AAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCCAGGTAAAGAGGTTGGTGCGCTaGCGTAGAAGGTCCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLAFKPRFEFSLSQVKRLVR*RRRSSS Trigger: ACTGGAGGACCTTCTACGGCAGCGCACCAACCTCTT...TACCTGGGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | TACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACATTCAGTAGTATGATCTaGTCATTCTGGCAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YPTASRSQGGTYGKSNITFSSMI*SFWQSS Trigger: GGAGCTCTGCCAGAATGACCAGATCATACTACTGAA...TGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | AGTCTCAGGAATCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACAGACTGTGTGGTTGTTaGCATTGTAGGCCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLRNLYSYYIQVLLGACHRLCGC*HCRPCT Trigger: TGTGCAGGGCCTACAATGCCAACAACCACACAGTCT...GTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGATTCCTGAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR GCA 90 bp | CAGGGTGGAACTTATGGGAAATCAAACATAACAAGCCTTTTCTCCATCACTTGCCGTCAGTGCTATAGATaGTGTCTCTGCCTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QGGTYGKSNITSLFSITCRQCYR*CLCLQL Trigger: AAGCTGAAGGCAGAGACAGCATCTATAGCACTGACG...GCAAGTGATGGAGAAAAGGCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | AGTCTCAGGAATCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACTCAATTTGTGAGGTGTaGGTCTTCTTTGCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRNLYSYYIQVLLGACHSICEV*VFFAAS Trigger: GCTGGCTGCAAAGAAGACCCACACCTCACAAATTGA...GTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGATTCCTGAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029795.10 |
||
| CDS-3UTR CCA 90 bp | AAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCCAGGTAGTCTGGACCCTGTTCTaGTTCCCCAAGTTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLAFKPRFEFSLSQVVWTLF*FPKFRM Trigger: CATCCTGAACTTGGGGAACCAGAACAGGGTCCAGAC...TACCTGGGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR CCA 90 bp | GTATTGAAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCGGCATATGGTACCTCTaGGGCACTGCAGAAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLKGLLLAFKPRFEFSLSGIWYL*GTAETG Trigger: CCCAGTTTCTGCAGTGCCCCAGAGGTACCATATGCC...GGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTTCAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | AAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCCAGGTAGAGTTCCTTATAGAGTaGAGGGAAGGCGGCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLAFKPRFEFSLSQVEFLIE*REGGLD Trigger: GTCCAAGCCGCCTTCCCTCCACTCTATAAGGAACTC...TACCTGGGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR GCA 90 bp | AGTCTCAGGAATCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACTATAGATGCTGTCTCTaGCTTCAGCTTTGCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRNLYSYYIQVLLGACHYRCCL*LQLCLV Trigger: AACGAGGCAAAGCTGAAGGCAGAGACAGCATCTATA...GTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGATTCCTGAGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR GCA 90 bp | ATGAATTCTGGTGTCCTGTATGAATTAGAACCTCAGGCTTCTCAGAGCTGCAACCTTGTCGATGAGTCTTaGAGAGATGATGATGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MNSGVLYELEPQASQSCNLVDES*RDDDGK Trigger: CTTTCCATCATCATCTCTGCAAGACTCATCGACAAG...GTTGCAGCTCTGAGAAGCCTGAGGTTCTAATTCATACAGGACACCAGAATTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | CAGGGTGGAACTTATGGGAAATCAAACATAACAAGCCTTTTCTCCATCACTTGCCAAGTTCAGGATGCCTaGTTTCCTCAAAACGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGGTYGKSNITSLFSITCQVQDA*FPQNEV Trigger: GACTTCGTTTTGAGGAAACCAGGCATCCTGAACTTG...GCAAGTGATGGAGAAAAGGCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CCA 90 bp | GTATTGAAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCACTTCCTCTGGTAGCTaGTCACCTCCTCCCGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLKGLLLAFKPRFEFSLSTSSGS*SPPPVK Trigger: TTTCACGGGAGGAGGTGACCAGCTACCAGAGGAAGT...GGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTTCAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR GCA 90 bp | TTTTATTTGACTTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGATGTCCCCACAGATCTTaGAAGGGATCACTTCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: FYLTWSSYLYPIYPTASRCPHRS*KGSLQF Trigger: AAATTGAAGTGATCCCTTGCAAGATCTGTGGGGACA...TCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAAGTCAAATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR GCA 90 bp | TACAATGAGGTATTGAAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTGCAGAAACTGGGAATaGAGTGGCTGTCTGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: YNEVLKGLLLAFKPRFEFCRNWE*SGCLDP Trigger: AGGGTCCAGACAGCCACTGCATTCCCAGTTTCTGCA...GAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTTCAATACCTCATTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR GCA 90 bp | GTATTGAAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCTGTTGCAGTTGTTTCTaGACTTCTGCATGTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLKGLLLAFKPRFEFSLSCCSCF*TSACRL Trigger: CAGTCTACATGCAGAAGTGCAGAAACAACTGCAACA...GGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTTCAATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CCA 90 bp | TACAATGAGGTATTGAAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCCAAGTTCAGGATGCCTaGTTTCCTCAAAACGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YNEVLKGLLLAFKPRFEFQVQDA*FPQNEV Trigger: GACTTCGTTTTGAGGAAACCAGGCATCCTGAACTTG...GAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTTCAATACCTCATTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS GCA 90 bp | ATCGGTTGCGGCTGGTTCGGTCAATGGGGCAGTTCTGCTGACGCGTaGAGGAGTAGGCCACATTACACTGCTGGCTGCGGCGGAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: IGCGWFGQWGSSADA*RSRPHYTAGCGGRS Trigger: GCTTCTTCCGCCGCAGCCAGCAGTGTAATGTGGCCTACTCCTGCACGCGTCAGCAGAACTGCCCCATTGACCGAACCAGCCGCAACCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS GCA 90 bp | GCTTCCTCTGGTAGCTGGTCACCTCCTCCCGTGAAAAGAGGTTGGTaGGCTGCCGTAGAAGGTCCTCCAGTCGCAGCTGGCATGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSGSWSPPPVKRGW*AAVEGPPVAAGMSL Trigger: GAGAGACATGCCAGCTGCGACTGGAGGACCTTCTACGGCAGCGCACCAACCTCTTTTCACGGGAGGAGGTGACCAGCTACCAGAGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200009.2 |
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| CDS CCA 90 bp | TCTGCAGGCGGCAATGCTGGCATCGGTTGCGGCTGGTTCGGTCAATaGGGCAGTTCTGCTGACGCGTGCAGGAGTAGGCCACATTACACT | + |
|
Preference number: 5 (lower is better) Translates to: SAGGNAGIGCGWFGQ*GSSADACRSRPHYT Trigger: AGTGTAATGTGGCCTACTCCTGCACGCGTCAGCAGAACTGCCCCATTGACCGAACCAGCCGCAACCGATGCCAGCATTGCCGCCTGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CCA 90 bp | GCAGCTTCCTCTGGTAGCTGGTCACCTCCTCCCGTGAAAAGAGGTTaGTGCGCTGCCGTAGAAGGTCCTCCAGTCGCAGCTGGCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AASSGSWSPPPVKRG*CAAVEGPPVAAGMS Trigger: AGACATGCCAGCTGCGACTGGAGGACCTTCTACGGCAGCGCACCAACCTCTTTTCACGGGAGGAGGTGACCAGCTACCAGAGGAAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200009.2 |
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| CDS GCA 90 bp | ACTTCCTCTGGTAGCTGGTCACCTCCTCCCGTGAAAAGAGGTTGGTaGGCTGCCGTAGAAGGTCCTCCAGTCGCAGCTGGCATGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSSGSWSPPPVKRGW*AAVEGPPVAAGMSL Trigger: GAGAGACATGCCAGCTGCGACTGGAGGACCTTCTACGGCAGCGCACCAACCTCTTTTCACGGGAGGAGGTGACCAGCTACCAGAGGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CAA 90 bp | AGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCTGGAGGGAAGGCGGCTaGGACCACGATGGGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RDTTLHRVQKGKGWVKGVWREGG*DHDGVE Trigger: CTCCACCCCATCGTGGTCCAAGCCGCCTTCCCTCCA...GACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CCA 90 bp | TTGACTTCCTCTGGTAGCTGGTCACCTCCTCCCGTGAAAAGAGGTTaGTGCGCTGCCGTAGAAGGTCCTCCAGTCGCAGCTGGCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTSSGSWSPPPVKRG*CAAVEGPPVAAGMS Trigger: AGACATGCCAGCTGCGACTGGAGGACCTTCTACGGCAGCGCACCAACCTCTTTTCACGGGAGGAGGTGACCAGCTACCAGAGGAAGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS CCA 90 bp | CTGGACTATACTCAAGGTGGCAGGAGGCCCCCTGGACCTCTGTTTTaGCCAAGGTATTGGAATATGGTGGGCCAGAGCCTGAGGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LDYTQGGRRPPGPLF*PRYWNMVGQSLRLS Trigger: TGAGAGCCTCAGGCTCTGGCCCACCATATTCCAATACCTTGGCCAAAACAGAGGTCCAGGGGGCCTCCTGCCACCTTGAGTATAGTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CCA 90 bp | GAGGCATATGGTACCTCTGGGGCACTGCAGAAACTGGGAATGCAGTaGCTGTCTGGACCCTGTTCTGGTTCCCCAAGTTCAGGATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EAYGTSGALQKLGMQ*LSGPCSGSPSSGCL Trigger: CAGGCATCCTGAACTTGGGGAACCAGAACAGGGTCCAGACAGCCACTGCATTCCCAGTTTCTGCAGTGCCCCAGAGGTACCATATGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CCA 90 bp | GCTTTGCCTCGTTCTGGACTATACTCAAGGTGGCAGGAGGCCCCCTaGACCTCTGTTTTGGCCAAGGTATTGGAATATGGTGGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALPRSGLYSRWQEAP*TSVLAKVLEYGGPE Trigger: CTCTGGCCCACCATATTCCAATACCTTGGCCAAAACAGAGGTCCAGGGGGCCTCCTGCCACCTTGAGTATAGTCCAGAACGAGGCAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CCA 90 bp | GAAAAGAGGTTGGTGCGCTGCCGTAGAAGGTCCTCCAGTCGCAGCTaGCATGTCTCTCGGAAGGACTTGCAGACATTCTGTACCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: EKRLVRCRRRSSSRS*HVSRKDLQTFCTRY Trigger: GTACCTGGTACAGAATGTCTGCAAGTCCTTCCGAGAGACATGCCAGCTGCGACTGGAGGACCTTCTACGGCAGCGCACCAACCTCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CAA 90 bp | TTGGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGCAATGCTGGCATCGGTaGCGGCTGGTTCGGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LVILSLSHLPHSFQKPGWQCWHR*RLVRSM Trigger: CATTGACCGAACCAGCCGCAACCGATGCCAGCATTG...CCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CAA 90 bp | GGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACAGCTTTTCCACATGTaGGCTGCACAGGCTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GHPISIPSTPQLPEARVEQLFHM*AAQAPE Trigger: CTCCGGAGCCTGTGCAGCCAACATGTGGAAAAGCTG...TTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS GCA 90 bp | TCAGAGAGGCATATGGTACCTCTGGGGCACTGCAGAAACTGGGAATaGAGTGGCTGTCTGGACCCTGTTCTGGTTCCCCAAGTTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SERHMVPLGHCRNWE*SGCLDPVLVPQVQD Trigger: ATCCTGAACTTGGGGAACCAGAACAGGGTCCAGACAGCCACTGCATTCCCAGTTTCTGCAGTGCCCCAGAGGTACCATATGCCTCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CCA 90 bp | GGCACTGCAGAAACTGGGAATGCAGTGGCTGTCTGGACCCTGTTCTaGTTCCCCAAGTTCAGGATGCCTGGTTTCCTCAAAACGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTAETGNAVAVWTLF*FPKFRMPGFLKTKS Trigger: GGACTTCGTTTTGAGGAAACCAGGCATCCTGAACTTGGGGAACCAGAACAGGGTCCAGACAGCCACTGCATTCCCAGTTTCTGCAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CCA 90 bp | TGTCTGTCAGAGAGGCATATGGTACCTCTGGGGCACTGCAGAAACTaGGAATGCAGTGGCTGTCTGGACCCTGTTCTGGTTCCCCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CLSERHMVPLGHCRN*ECSGCLDPVLVPQV Trigger: AACTTGGGGAACCAGAACAGGGTCCAGACAGCCACTGCATTCCCAGTTTCTGCAGTGCCCCAGAGGTACCATATGCCTCTCTGACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CAA 90 bp | AGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCAGGAGTCTTGGCCACTaGTTCCTGTTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RDTTLHRVQKGKGWVKGVRSLGH*FLLLLL Trigger: CAGCAGCAGCAACAGGAACAAGTGGCCAAGACTCCT...GACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CAA 90 bp | CCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGCCAGCTGGAGGAGTCTaGGCCACTTGTTCCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PISIPSTPQLPEARVELMPAGGV*ATCSCC Trigger: GCAACAGGAACAAGTGGCCAAGACTCCTCCAGCTGG...CATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS-3UTR CAA 90 bp | AGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGAAGGGAGTCCCCACATCTCCCACATaGACTTCCTCTGGTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RDTTLHRVQKGKGWVKGVPTSPT*TSSGSW Trigger: CCAGCTACCAGAGGAAGTCAATGTGGGAGATGTGGG...GACTCCCTTCACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS-3UTR CAA 90 bp | TATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGCAGCTTTTCCACATGTaGGCTGCACAGGCTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YLYPIYPTASRSQGGTYGQLFHM*AAQAPE Trigger: CTCCGGAGCCTGTGCAGCCAACATGTGGAAAAGCTG...CCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | CCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGCAGCTTTTCCACATGTaGGCTGCACAGGCTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PISIPSTPQLPEARVELMQLFHM*AAQAPE Trigger: CTCCGGAGCCTGTGCAGCCAACATGTGGAAAAGCTG...CATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS GCA 90 bp | GGTACTCTATGTCTGTCAGAGAGGCATATGGTACCTCTGGGGCACTaGAGAAACTGGGAATGCAGTGGCTGTCTGGACCCTGTTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GTLCLSERHMVPLGH*RNWECSGCLDPVLV Trigger: AACCAGAACAGGGTCCAGACAGCCACTGCATTCCCAGTTTCTGCAGTGCCCCAGAGGTACCATATGCCTCTCTGACAGACATAGAGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | TCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCTCCGGAGTTTTCCTTaGGGTGGCAGCTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SIPSTPQLPEARVELMGNLRSFP*GGSFLW Trigger: CCAGAGGAAGCTGCCACCCAAAGGAAAACTCCGGAG...ATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200009.2 |
||
| CDS GCA 90 bp | GTAGAAGGTCCTCCAGTCGCAGCTGGCATGTCTCTCGGAAGGACTTaGAGACATTCTGTACCAGGTACTCTATGTCTGTCAGAGAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VEGPPVAAGMSLGRT*RHSVPGTLCLSERH Trigger: ATGCCTCTCTGACAGACATAGAGTACCTGGTACAGAATGTCTGCAAGTCCTTCCGAGAGACATGCCAGCTGCGACTGGAGGACCTTCTAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGAGACGGGTCAGAGGGCTGAAGGAAATAGAAAGTTGTCCTTCCTCCAGCTGCTGCTGTTGCAGTaGTTTCTGCACTTCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SRETGQRAEGNRKLSFLQLLLLQ*FLHFCM Trigger: CATGCAGAAGTGCAGAAACAACTGCAACAGCAGCAG...CTGGAGGAAGGACAACTTTCTATTTCCTTCAGCCCTCTGACCCGTCTCCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGAACCTCAGGCTTCTCAGAGCTGCAACCTCAAGGAAGAGATTGTGTGCCACCAGCTGGAGGAGTCTaGGCCACTTGTTCCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: IRTSGFSELQPQGRDCVPPAGGV*ATCSCC Trigger: GCAACAGGAACAAGTGGCCAAGACTCCTCCAGCTGG...TGGCACACAATCTCTTCCTTGAGGTTGCAGCTCTGAGAAGCCTGAGGTTCTAAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197040.5 |
||
| CDS-3UTR CAA 90 bp | CTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGGTCTCTCGGAAGGACTaGCAGACATTCTGTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTPRDTTLHRVQKGKGWVVSRKD*QTFCTR Trigger: CCTGGTACAGAATGTCTGCAAGTCCTTCCGAGAGAC...CACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | CTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCGTCTCTCGGAAGGACTaGCAGACATTCTGTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSHLPHSFQKPGWNLWEIVSRKD*QTFCTR Trigger: CCTGGTACAGAATGTCTGCAAGTCCTTCCGAGAGAC...GATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGTGGAACTTATGGGAAATCAAACATAACAAGCCTTTTCTCCATCACTTGCTGGAGGGAAGGCGGCTaGGACCACGATGGGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGGTYGKSNITSLFSITCWREGG*DHDGVE Trigger: CTCCACCCCATCGTGGTCCAAGCCGCCTTCCCTCCA...GCAAGTGATGGAGAAAAGGCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | TATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGCTGCTGCTGTTGCAGTaGTTTCTGCACTTCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: YLYPIYPTASRSQGGTYGLLLLQ*FLHFCM Trigger: CATGCAGAAGTGCAGAAACAACTGCAACAGCAGCAG...CCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | CTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACGGCCACTTGTTCCTGTaGCTGCTGCTGTTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPHSFQKPGWNLWEIKHNGHLFL*LLLLQL Trigger: CAACTGCAACAGCAGCAGCAACAGGAACAAGTGGCC...GTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | CCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGCAGGAGTCTTGGCCACTaGTTCCTGTTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTASRSQGGTYGKSNITSRSLGH*FLLLLL Trigger: CAGCAGCAGCAACAGGAACAAGTGGCCAAGACTCCT...GCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | CTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGTCTCTGCCTTCAGCTTaGCCTCGTTCTGGACTATAC | + |
|
Preference number: 5 (lower is better) Translates to: LTPRDTTLHRVQKGKGWVSLPSA*PRSGLY Trigger: GTATAGTCCAGAACGAGGCAAAGCTGAAGGCAGAGA...CACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | TATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGTCTCTGCCTTCAGCTTaGCCTCGTTCTGGACTATAC | + |
|
Preference number: 5 (lower is better) Translates to: YLYPIYPTASRSQGGTYGSLPSA*PRSGLY Trigger: GTATAGTCCAGAACGAGGCAAAGCTGAAGGCAGAGA...CCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | GGTCATCCTATCTCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTAGGACGACTTCCATaGCTCCTGCTTTCAGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GHPISIPSTPQLPEARVELGRLP*LLLSVV Trigger: TACTACTGAAAGCAGGAGCAATGGAAGTCGTCCTAG...TTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGAGATAGGATGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS GCA 90 bp | ATGCAGTGGCTGTCTGGACCCTGTTCTGGTTCCCCAAGTTCAGGATaGCTGGTTTCCTCAAAACGAAGTCCACATCTTCCAAGAGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: MQWLSGPCSGSPSSG*LVSSKRSPHLPRVS Trigger: ACTTACTCTTGGAAGATGTGGACTTCGTTTTGAGGAAACCAGGCATCCTGAACTTGGGGAACCAGAACAGGGTCCAGACAGCCACTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | TACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAGGCCACTTGTTCCTGTaGCTGCTGCTGTTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YPTASRSQGGTYGKSNITGHLFL*LLLLQL Trigger: CAACTGCAACAGCAGCAGCAACAGGAACAAGTGGCC...TGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGAGACGGGTCAGAGGGCTGAAGGAAATAGAAAGTTGTCCTTCCTCCAGTCTTCCAAGAGTAAGTaGGCCGTCAGTGCTATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SRETGQRAEGNRKLSFLQSSKSK*AVSAID Trigger: ATCTATAGCACTGACGGCCAACTTACTCTTGGAAGA...CTGGAGGAAGGACAACTTTCTATTTCCTTCAGCCCTCTGACCCGTCTCCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | CCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGCGTCTCTCGGAAGGACTaGCAGACATTCTGTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTASRSQGGTYGKSNITSVSRKD*QTFCTR Trigger: CCTGGTACAGAATGTCTGCAAGTCCTTCCGAGAGAC...GCTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | CTTACTCCTAGGGATACCACCCTTCATAGAGTGCAGAAAGGGAAAGGCTGGGTGTTGTCCCCACAGATCTaGCAAGGGATCACTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: LTPRDTTLHRVQKGKGWVLSPQI*QGITSI Trigger: AATTGAAGTGATCCCTTGCAAGATCTGTGGGGACAA...CACCCAGCCTTTCCCTTTCTGCACTCTATGAAGGGTGGTATCCCTAGGAGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTTCTCCATCACTTGCTGCTGTTGTCCTACAAGGCAAGCCTAGGGGCAGAATTGTCCCCACAGATCTaGCAAGGGATCACTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: PFLHHLLLLSYKASLGAELSPQI*QGITSI Trigger: AATTGAAGTGATCCCTTGCAAGATCTGTGGGGACAA...TTCTGCCCCTAGGCTTGCCTTGTAGGACAACAGCAGCAAGTGATGGAGAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGGAATCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACCAGGGCCACTTGTTCCTGTaGCTGCTGCTGTTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRNLYSYYIQVLLGACHQGHLFL*LLLLQL Trigger: CAACTGCAACAGCAGCAGCAACAGGAACAAGTGGCC...CTGGTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGATTCCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR CAA 90 bp | TCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACCAGTCTCTGAGCCCACATCTCCCACATaGACTTCCTCTGGTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SIFLLYTGPSGGLPPVSEPTSPT*TSSGSW Trigger: CCAGCTACCAGAGGAAGTCAATGTGGGAGATGTGGG...CTCAGAGACTGGTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR CAA 90 bp | GTATTGAAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCTGGAGGGAAGGCGGCTaGGACCACGATGGGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLKGLLLAFKPRFEFSLSWREGG*DHDGVE Trigger: CTCCACCCCATCGTGGTCCAAGCCGCCTTCCCTCCA...GGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTTCAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS GCA 90 bp | TTCCTTTGGGTGGCAGCTTGGCTAGGAGGCCTTGTCGATGAGTCTTaGAGAGATGATGATGGAAAGCCAGTTCCAAATTGTATTGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLWVAAWLGGLVDES*RDDDGKPVPNCIAD Trigger: ATCTGCAATACAATTTGGAACTGGCTTTCCATCATCATCTCTGCAAGACTCATCGACAAGGCCTCCTAGCCAAGCTGCCACCCAAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR CAA 90 bp | TCTATCCCATCTACCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATTTGTCCCCACAGATCTaGCAAGGGATCACTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: SIPSTPQLPEARVELMGNLSPQI*QGITSI Trigger: AATTGAAGTGATCCCTTGCAAGATCTGTGGGGACAA...ATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGGTAGATGGGATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCCAGGTACAATGCTGGCATCGGTaGCGGCTGGTTCGGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KGLLLAFKPRFEFSLSQVQCWHR*RLVRSM Trigger: CATTGACCGAACCAGCCGCAACCGATGCCAGCATTG...TACCTGGGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR CAA 90 bp | CCCCACAGCTTCCAGAAGCCAGGGTGGAACTTATGGGAAATCAAACATAACAAGTCTTCCAAGAGTAAGTaGGCCGTCAGTGCTATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PHSFQKPGWNLWEIKHNKSSKSK*AVSAID Trigger: ATCTATAGCACTGACGGCCAACTTACTCTTGGAAGA...CTTGTTATGTTTGATTTCCCATAAGTTCCACCCTGGCTTCTGGAAGCTGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS-3UTR CAA 90 bp | AGTCTCAGGAATCTATATTCTTATTATATACAGGTCCTTCTGGGGGCTTGCCACTCTCTGCCTTCAGCTTaGCCTCGTTCTGGACTATAC | + |
|
Preference number: 5 (lower is better) Translates to: SLRNLYSYYIQVLLGACHSLPSA*PRSGLY Trigger: GTATAGTCCAGAACGAGGCAAAGCTGAAGGCAGAGA...GTGGCAAGCCCCCAGAAGGACCTGTATATAATAAGAATATAGATTCCTGAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR CAA 90 bp | GTATTGAAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCCTAGGACGACTTCCATaGCTCCTGCTTTCAGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VLKGLLLAFKPRFEFSLSLGRLP*LLLSVV Trigger: TACTACTGAAAGCAGGAGCAATGGAAGTCGTCCTAG...GGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTTCAATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS-3UTR CAA 90 bp | GTATTGAAAGGACTGTTATTAGCTTTCAAGCCTAGATTTGAGTTCTCCTTATCCTCTTCCAAGAGTAAGTaGGCCGTCAGTGCTATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VLKGLLLAFKPRFEFSLSSSKSK*AVSAID Trigger: ATCTATAGCACTGACGGCCAACTTACTCTTGGAAGA...GGATAAGGAGAACTCAAATCTAGGCTTGAAAGCTAATAACAGTCCTTTCAATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS GCA 72 bp | GGCTGGTTCGGTCAATGGGGCAGTTCTGCTGACGCGTaGAGGAGTAGGCCACATTACACTGCTGGCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GWFGQWGSSADA*RSRPHYTAGCG Trigger: GCCGCAGCCAGCAGTGTAATGTGGCCTACTCCTGCACGCGTCAGCAGAACTGCCCCATTGACCGAACCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS GCA 72 bp | GGTAGCTGGTCACCTCCTCCCGTGAAAAGAGGTTGGTaGGCTGCCGTAGAAGGTCCTCCAGTCGCAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSWSPPPVKRGW*AAVEGPPVAAG Trigger: GCCAGCTGCGACTGGAGGACCTTCTACGGCAGCGCACCAACCTCTTTTCACGGGAGGAGGTGACCAGCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS CCA 72 bp | GGCAATGCTGGCATCGGTTGCGGCTGGTTCGGTCAATaGGGCAGTTCTGCTGACGCGTGCAGGAGTAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GNAGIGCGWFGQ*GSSADACRSRP Trigger: TGGCCTACTCCTGCACGCGTCAGCAGAACTGCCCCATTGACCGAACCAGCCGCAACCGATGCCAGCATTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS CCA 72 bp | ACTTCTGCAGGCGGCAATGCTGGCATCGGTTGCGGCTaGTTCGGTCAATGGGGCAGTTCTGCTGACGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSAGGNAGIGCG*FGQWGSSADAC Trigger: GCACGCGTCAGCAGAACTGCCCCATTGACCGAACCAGCCGCAACCGATGCCAGCATTGCCGCCTGCAGAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS GCA 72 bp | CTGGTCACCTCCTCCCGTGAAAAGAGGTTGGTGCGCTaGCGTAGAAGGTCCTCCAGTCGCAGCTGGCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: LVTSSREKRLVR*RRRSSSRSWHV Trigger: GACATGCCAGCTGCGACTGGAGGACCTTCTACGGCAGCGCACCAACCTCTTTTCACGGGAGGAGGTGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS GCA 72 bp | GCTTGGACCACGATGGGGTGGAGGTGCTGGAAGATCTaGAGCTTTTCCACATGTTGGCTGCACAGGCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AWTTMGWRCWKI*SFSTCWLHRLR Trigger: CCGGAGCCTGTGCAGCCAACATGTGGAAAAGCTGCAGATCTTCCAGCACCTCCACCCCATCGTGGTCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS GCA 72 bp | GGAGGGAAGGCGGCTTGGACCACGATGGGGTGGAGGTaGTGGAAGATCTGCAGCTTTTCCACATGTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGKAAWTTMGWR*WKICSFSTCWL Trigger: CAGCCAACATGTGGAAAAGCTGCAGATCTTCCAGCACCTCCACCCCATCGTGGTCCAAGCCGCCTTCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS CCA 72 bp | TCTGGTAGCTGGTCACCTCCTCCCGTGAAAAGAGGTTaGTGCGCTGCCGTAGAAGGTCCTCCAGTCGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGSWSPPPVKRG*CAAVEGPPVAA Trigger: AGCTGCGACTGGAGGACCTTCTACGGCAGCGCACCAACCTCTTTTCACGGGAGGAGGTGACCAGCTACCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS CCA 72 bp | CCACATGTTGGCTGCACAGGCTCCGGAGTTTTCCTTTaGGTGGCAGCTTGGCTAGGAGGCCTTGTCGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: PHVGCTGSGVFL*VAAWLGGLVDE Trigger: CTCATCGACAAGGCCTCCTAGCCAAGCTGCCACCCAAAGGAAAACTCCGGAGCCTGTGCAGCCAACATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS CAA 90 bp | TCTGGACTATACTCAAGGTGGCAGGAGGCCCCCTGGACCTCTGTTTaGGCCAAGGTATTGGAATATGGTGGGCCAGAGCCTGAGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGLYSRWQEAPWTSV*AKVLEYGGPEPEAL Trigger: GAGAGCCTCAGGCTCTGGCCCACCATATTCCAATACCTTGGCCAAAACAGAGGTCCAGGGGGCCTCCTGCCACCTTGAGTATAGTCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS CCA 72 bp | AGTGTATGTAAGTGTGTCTGCTCCGCGGCTCCCAGCTaGAGGAGTCTTGGCCACTTGTTCCTGTTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVCKCVCSAAPS*RSLGHLFLLLL Trigger: CAGCAGCAACAGGAACAAGTGGCCAAGACTCCTCCAGCTGGGAGCCGCGGAGCAGACACACTTACATACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS CCA 72 bp | GGTACCTCTGGGGCACTGCAGAAACTGGGAATGCAGTaGCTGTCTGGACCCTGTTCTGGTTCCCCAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GTSGALQKLGMQ*LSGPCSGSPSS Trigger: TGAACTTGGGGAACCAGAACAGGGTCCAGACAGCCACTGCATTCCCAGTTTCTGCAGTGCCCCAGAGGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS CCA 72 bp | TTGGTGCGCTGCCGTAGAAGGTCCTCCAGTCGCAGCTaGCATGTCTCTCGGAAGGACTTGCAGACATTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LVRCRRRSSSRS*HVSRKDLQTFC Trigger: ACAGAATGTCTGCAAGTCCTTCCGAGAGACATGCCAGCTGCGACTGGAGGACCTTCTACGGCAGCGCACCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS CCA 72 bp | GCTCCCACATCTCCCACATTGACTTCCTCTGGTAGCTaGTCACCTCCTCCCGTGAAAAGAGGTTGGTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: APTSPTLTSSGS*SPPPVKRGWCA Trigger: AGCGCACCAACCTCTTTTCACGGGAGGAGGTGACCAGCTACCAGAGGAAGTCAATGTGGGAGATGTGGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
||
| CDS CAA 72 bp | GCTGAAGAGTTCCTTATAGAGTGGAGGGAAGGCGGCTaGGACCACGATGGGGTGGAGGTGCTGGAAGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: AEEFLIEWREGG*DHDGVEVLEDL Trigger: CAGATCTTCCAGCACCTCCACCCCATCGTGGTCCAAGCCGCCTTCCCTCCACTCTATAAGGAACTCTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS GCA 72 bp | TGTCTGTCAGAGAGGCATATGGTACCTCTGGGGCACTaGAGAAACTGGGAATGCAGTGGCTGTCTGGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: CLSERHMVPLGH*RNWECSGCLDP Trigger: AGGGTCCAGACAGCCACTGCATTCCCAGTTTCTGCAGTGCCCCAGAGGTACCATATGCCTCTCTGACAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS CCA 72 bp | GAGAGGCATATGGTACCTCTGGGGCACTGCAGAAACTaGGAATGCAGTGGCTGTCTGGACCCTGTTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ERHMVPLGHCRN*ECSGCLDPVLV Trigger: AACCAGAACAGGGTCCAGACAGCCACTGCATTCCCAGTTTCTGCAGTGCCCCAGAGGTACCATATGCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
||
| CDS CAA 90 bp | AACATCAGTGCTGAAGAGTTCCTTATAGAGTGGAGGGAAGGCGGCTaGGACCACGATGGGGTGGAGGTGCTGGAAGATCTGCAGCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: NISAEEFLIEWREGG*DHDGVEVLEDLQLF Trigger: GAAAAGCTGCAGATCTTCCAGCACCTCCACCCCATCGTGGTCCAAGCCGCCTTCCCTCCACTCTATAAGGAACTCTTCAGCACTGATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS GCA 72 bp | CGTCAGTGCTATAGATGCTGTCTCTGCCTTCAGCTTTaGCTCGTTCTGGACTATACTCAAGGTGGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RQCYRCCLCLQL*LVLDYTQGGRR Trigger: CCTCCTGCCACCTTGAGTATAGTCCAGAACGAGGCAAAGCTGAAGGCAGAGACAGCATCTATAGCACTGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CCA 72 bp | GAAACTGGGAATGCAGTGGCTGTCTGGACCCTGTTCTaGTTCCCCAAGTTCAGGATGCCTGGTTTCCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: ETGNAVAVWTLF*FPKFRMPGFLK Trigger: TTTGAGGAAACCAGGCATCCTGAACTTGGGGAACCAGAACAGGGTCCAGACAGCCACTGCATTCCCAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CAA 90 bp | AGCCAGTTCCAAATTGTATTGCAGATGTTCCACTCTCCTCTTCTCTaGGAGCCCAGGACGGTTGGCATTGATGAGAACCAGGGCCGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SQFQIVLQMFHSPLL*EPRTVGIDENQGRV Trigger: TACACGGCCCTGGTTCTCATCAATGCCAACCGTCCTGGGCTCCAAGAGAAGAGGAGAGTGGAACATCTGCAATACAATTTGGAACTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS TCA 72 bp | ACTTTGACAGCCCCTCAGGGGATTCAACATCAGTGCTaGAGAGTTCCTTATAGAGTGGAGGGAAGGCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: TLTAPQGIQHQC*RVPYRVEGRRL Trigger: AAGCCGCCTTCCCTCCACTCTATAAGGAACTCTTCAGCACTGATGTTGAATCCCCTGAGGGGCTGTCAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CAA 90 bp | ATGCCTGGTTTCCTCAAAACGAAGTCCACATCTTCCAAGAGTAAGTaGGCCGTCAGTGCTATAGATGCTGTCTCTGCCTTCAGCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: MPGFLKTKSTSSKSK*AVSAIDAVSAFSFA Trigger: GGCAAAGCTGAAGGCAGAGACAGCATCTATAGCACTGACGGCCAACTTACTCTTGGAAGATGTGGACTTCGTTTTGAGGAAACCAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CCA 72 bp | AAATTGTATTGCAGATGTTCCACTCTCCTCTTCTCTTaGAGCCCAGGACGGTTGGCATTGATGAGAACCAGG | + |
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Preference number: 6 (lower is better) Translates to: KLYCRCSTLLFS*SPGRLALMRTR Trigger: CCTGGTTCTCATCAATGCCAACCGTCCTGGGCTCCAAGAGAAGAGGAGAGTGGAACATCTGCAATACAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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| CDS CAA 72 bp | TTCCTCAAAACGAAGTCCACATCTTCCAAGAGTAAGTaGGCCGTCAGTGCTATAGATGCTGTCTCTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FLKTKSTSSKSK*AVSAIDAVSAF Trigger: GAAGGCAGAGACAGCATCTATAGCACTGACGGCCAACTTACTCTTGGAAGATGTGGACTTCGTTTTGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 ENSMUST00000200009.2 |
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| CDS CAA 72 bp | GCAGAGATGATGATGGAAAGCCAGTTCCAAATTGTATaGCAGATGTTCCACTCTCCTCTTCTCTTGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: AEMMMESQFQIV*QMFHSPLLLEP Trigger: GGGCTCCAAGAGAAGAGGAGAGTGGAACATCTGCAATACAATTTGGAACTGGCTTTCCATCATCATCTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029795.10 ENSMUST00000197040.5 |
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