Pregenerated sensors for ROGDI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022540Ensembl transcript IDs: ENSMUST00000023191.17, ENSMUST00000090453.9, ENSMUST00000201077.2, ENSMUST00000202281.4
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTCTTCCGCAGCCCAGGTCCCTCTTCCCTCCTCCACCTCAGAGGTaGGTGCTAACCCCATCCCTCAAGGGCTCCCTAATGGGAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: VLPQPRSLFPPPPQR*VLTPSLKGSLMGAE Trigger: CTCAGCTCCCATTAGGGAGCCCTTGAGGGATGGGGTTAGCACTCACCTCTGAGGTGGAGGAGGGAAGAGGGACCTGGGCTGCGGAAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR TCA 90 bp | GAGGTGAGTGCTAACCCCATCCCTCAAGGGCTCCCTAATGGGAGCTaGGAGGGTAGGAGAAGGGAGAGGCCTAGGCTTGGTCCCACCTTA | + |
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Preference number: 1 (lower is better) Translates to: EVSANPIPQGLPNGS*EGRRRERPRLGPTL Trigger: TAAGGTGGGACCAAGCCTAGGCCTCTCCCTTCTCCTACCCTCTCAGCTCCCATTAGGGAGCCCTTGAGGGATGGGGTTAGCACTCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR TCA 90 bp | TCTCCAGGTGCCTCTCAGGTTCACTGCCATCAGTACCACAGGGAATaGGGAGGGAGAAAAGTGACAGTGACAGGCACTGCATGGGTACGA | + |
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Preference number: 1 (lower is better) Translates to: SPGASQVHCHQYHRE*GGRKVTVTGTAWVR Trigger: TCGTACCCATGCAGTGCCTGTCACTGTCACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAGGCACCTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGGCAGGGTTAGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACGTGACAGGCACTGCATaGGTACGAGTTGTGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QEGRVRSMVTPQLIFLTDVTGTA*VRVVGR Trigger: CCTCCCCACAACTCGTACCCATGCAGTGCCTGTCAC...GTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCTAACCCTGCCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR TCA 90 bp | CACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCACTCCCTAATGGGAGCTaGGAGGGTAGGAGAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HRTDGPSTAPDLQGGSSALPNGS*EGRRRE Trigger: CTCCCTTCTCCTACCCTCTCAGCTCCCATTAGGGAG...TGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR CCA 90 bp | CTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGACTCAGGGCTACCATCTTaGGGGAGGAGTCAGGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LSGSLPSVPQGMRREKSDSGLPS*GRSQAG Trigger: ACCTGCCTGACTCCTCCCCCAAGATGGTAGCCCTGA...GTCACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR CCA 90 bp | CACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCATCAGGGCTACCATCTTaGGGGAGGAGTCAGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: HRTDGPSTAPDLQGGSSASGLPS*GRSQAG Trigger: ACCTGCCTGACTCCTCCCCCAAGATGGTAGCCCTGA...TGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGGCAGGGTTAGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACCATGGGTACGAGTTGTaGGGAGGGGCTACAAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: QEGRVRSMVTPQLIFLTDHGYEL*GGATSQ Trigger: CTGACTTGTAGCCCCTCCCCACAACTCGTACCCATG...GTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCTAACCCTGCCTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR CCA 90 bp | CTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGACGTGACAGGCACTGCATaGGTACGAGTTGTGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LSGSLPSVPQGMRREKSDVTGTA*VRVVGR Trigger: CCTCCCCACAACTCGTACCCATGCAGTGCCTGTCAC...GTCACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGACAGTGACAGGCACTaGATGGGTACGAGTTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: CLSGSLPSVPQGMRREKSDSDRH*MGTSCG Trigger: CCCACAACTCGTACCCATGCAGTGCCTGTCACTGTC...ACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR CCA 90 bp | GTCACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGGCAGGGTTAGGAGCATaGTCACACCTCAGCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: VTEQMVPVLHLIYREVLPAGLGA*SHLSSS Trigger: AGATGAGCTGAGGTGTGACCATGCTCCTAACCCTGC...CGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR GCA 90 bp | GTCACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGTCAAAACACCAAGCCTaGACTCACTTCTCCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: VTEQMVPVLHLIYREVLPSKHQA*THFSRC Trigger: GCACCTGGAGAAGTGAGTGCAGGCTTGGTGTTTTGA...CGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR CAA 90 bp | CCTCCCCTAATCAAAACACCAAGCCTGCACTCACTTCTCCAGGTGCCTCTCAGGGTCAGGGCTACCATCTaGGGGGAGGAGTCAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: PPLIKTPSLHSLLQVPLRVRATI*GEESGR Trigger: CCTGCCTGACTCCTCCCCCAAGATGGTAGCCCTGAC...CCTGAGAGGCACCTGGAGAAGTGAGTGCAGGCTTGGTGTTTTGATTAGGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR TCA 72 bp | GTGGGGTCACAGAACAGATGGTCCCAGTACTGCACCTaGTTTACAGGGAGGTTCTTCCGCAGCCCAGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: VGSQNRWSQYCT*FTGRFFRSPGP Trigger: GGGACCTGGGCTGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTGACCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR CAA 90 bp | CTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGACGTCAGGGCTACCATCTaGGGGGAGGAGTCAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LSGSLPSVPQGMRREKSDVRATI*GEESGR Trigger: CCTGCCTGACTCCTCCCCCAAGATGGTAGCCCTGAC...GTCACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGGCAGGGTTAGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACCTGCATGGGTACGAGTaGTGGGGAGGGGCTACAAGT | + |
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Preference number: 3 (lower is better) Translates to: QEGRVRSMVTPQLIFLTDLHGYE*WGGATS Trigger: ACTTGTAGCCCCTCCCCACAACTCGTACCCATGCAG...GTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCTAACCCTGCCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR-3UTR CAA 90 bp | GTCACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCTGCATGGGTACGAGTaGTGGGGAGGGGCTACAAGT | + |
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Preference number: 3 (lower is better) Translates to: VTEQMVPVLHLIYREVLPLHGYE*WGGATS Trigger: ACTTGTAGCCCCTCCCCACAACTCGTACCCATGCAG...CGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| 3UTR TCA 72 bp | GCCTCTCAGGTTCACTGCCATCAGTACCACAGGGAATaGGGAGGGAGAAAAGTGACAGTGACAGGCACTGCA | + |
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Preference number: 3 (lower is better) Translates to: ASQVHCHQYHRE*GGRKVTVTGTA Trigger: TGCAGTGCCTGTCACTGTCACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | GTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCAGCCCAGGTCCCTCGGGGCTGTGGAGCACTaGGCCTCCGGCCGGGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: VPVLHLIYREVLPQPRSLGAVEH*ASGRAE Trigger: TTCCGCCCGGCCGGAGGCGCAGTGCTCCACAGCCCC...GAGGGACCTGGGCTGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | CCTCCCCTAATCAAAACACCAAGCCTGCACTCACTTCTCCAGGTGCCTCTCAGGCTCCTCCTCCAGTACTaGCCGCTCCGCGGCGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: PPLIKTPSLHSLLQVPLRLLLQY*PLRGAR Trigger: GCGAGCGCCGCGGAGCGGGCAGTACTGGAGGAGGAG...CCTGAGAGGCACCTGGAGAAGTGAGTGCAGGCTTGGTGTTTTGATTAGGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTACAAGTCAGGGCTACCATCTTGGGGGAGGAGTCAGGCAGGTGCTTGCCGGGCGGAAGTTCTTaGTGGAGGTGGGTTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EGLQVRATILGEESGRCLPGGSS*WRWVAG Trigger: CCCTGCAACCCACCTCCACCAAGAACTTCCGCCCGG...CAAGCACCTGCCTGACTCCTCCCCCAAGATGGTAGCCCTGACTTGTAGCCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | GTCACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGGGGGCTGTGGAGCACTaGGCCTCCGGCCGGGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: VTEQMVPVLHLIYREVLPGAVEH*ASGRAE Trigger: TTCCGCCCGGCCGGAGGCGCAGTGCTCCACAGCCCC...CGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | GTCACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCTCCTCCTCCAGTACTaGCCGCTCCGCGGCGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: VTEQMVPVLHLIYREVLPLLLQY*PLRGAR Trigger: GCGAGCGCCGCGGAGCGGGCAGTACTGGAGGAGGAG...CGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CCA 90 bp | CCTCCCCTAATCAAAACACCAAGCCTGCACTCACTTCTCCAGGTGCCTCTCAGGCTCGGTGCTGGGGCCTaGGAGAGTGAAGCGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PPLIKTPSLHSLLQVPLRLGAGA*ESEAER Trigger: TCTCTCCGCTTCACTCTCCCAGGCCCCAGCACCGAG...CCTGAGAGGCACCTGGAGAAGTGAGTGCAGGCTTGGTGTTTTGATTAGGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR TCA 90 bp | TGCCTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTTGGGGCCTGGGAGAGTaGAGCGGAGAGAGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CLSGSLPSVPQGMRREKSWGLGE*SGERPP Trigger: AGGAGGCCTCTCTCCGCTTCACTCTCCCAGGCCCCA...ACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CCA 90 bp | GTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCAGCCCAGGTCCCTCTGGTTCCTGGCATCCTaGATCTGCTGCAGCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VPVLHLIYREVLPQPRSLWFLAS*ICCSFH Trigger: GTGGAAGCTGCAGCAGATCCAGGATGCCAGGAACCA...GAGGGACCTGGGCTGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CCA 90 bp | TGCCTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTCTCGGTGCTGGGGCCTaGGAGAGTGAAGCGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: CLSGSLPSVPQGMRREKSLGAGA*ESEAER Trigger: TCTCTCCGCTTCACTCTCCCAGGCCCCAGCACCGAG...ACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CCA 90 bp | GGAATGAGGAGGGAGAAAAGTGACAGTGACAGGCACTGCATGGGTACGAGTTGTCCGGGCGGAAGTTCTTaGTGGAGGTGGGTTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GMRREKSDSDRHCMGTSCPGGSS*WRWVAG Trigger: CCCTGCAACCCACCTCCACCAAGAACTTCCGCCCGG...ACAACTCGTACCCATGCAGTGCCTGTCACTGTCACTTTTCTCCCTCCTCATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR TCA 90 bp | GTCACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGGGAGAGAGGCCTCCTTaGGGATGTCCTGCAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: VTEQMVPVLHLIYREVLPGERPP*GCPAAV Trigger: GACAGCTGCAGGACATCCTCAAGGAGGCCTCTCTCC...CGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR TCA 90 bp | GGAATGAGGAGGGAGAAAAGTGACAGTGACAGGCACTGCATGGGTACGAGTTGTGGAGAGAGGCCTCCTTaGGGATGTCCTGCAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GMRREKSDSDRHCMGTSCGERPP*GCPAAV Trigger: GACAGCTGCAGGACATCCTCAAGGAGGCCTCTCTCC...ACAACTCGTACCCATGCAGTGCCTGTCACTGTCACTTTTCTCCCTCCTCATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR TCA 90 bp | CCTCCCCTAATCAAAACACCAAGCCTGCACTCACTTCTCCAGGTGCCTCTCAGGGTTGCAGGGAGACGGTaGAGTATACCAGGGCATCGT | + |
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Preference number: 4 (lower is better) Translates to: PPLIKTPSLHSLLQVPLRVAGRR*SIPGHR Trigger: ACGATGCCCTGGTATACTTCACCGTCTCCCTGCAAC...CCTGAGAGGCACCTGGAGAAGTGAGTGCAGGCTTGGTGTTTTGATTAGGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR TCA 90 bp | CCTCCCCTAATCAAAACACCAAGCCTGCACTCACTTCTCCAGGTGCCTCTCAGGCAGCGATCTTGTCCTTaGGCTGCTGGCAGAGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: PPLIKTPSLHSLLQVPLRQRSCP*AAGRVA Trigger: TGCAACTCTGCCAGCAGCTCAAGGACAAGATCGCTG...CCTGAGAGGCACCTGGAGAAGTGAGTGCAGGCTTGGTGTTTTGATTAGGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | CAGGAAGGCAGGGTTAGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACTCCTTGAGGATGTCCTaGAGCTGTCTCAGCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: QEGRVRSMVTPQLIFLTDSLRMS*SCLSTA Trigger: CGCCGTGCTGAGACAGCTGCAGGACATCCTCAAGGA...GTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCTAACCCTGCCTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CCA 90 bp | CTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGACGGCGGAAGTTCTTGGTaGAGGTGGGTTGCAGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LSGSLPSVPQGMRREKSDGGSSW*RWVAGR Trigger: ACGCCCTGCAACCCACCTCCACCAAGAACTTCCGCC...GTCACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CCA 90 bp | GGAATGAGGAGGGAGAAAAGTGACAGTGACAGGCACTGCATGGGTACGAGTTGTGGCGGAAGTTCTTGGTaGAGGTGGGTTGCAGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GMRREKSDSDRHCMGTSCGGSSW*RWVAGR Trigger: ACGCCCTGCAACCCACCTCCACCAAGAACTTCCGCC...ACAACTCGTACCCATGCAGTGCCTGTCACTGTCACTTTTCTCCCTCCTCATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR TCA 90 bp | AGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACCCCTCCCCTAATCAACACAGCTGCCCAGGATaGAGTTCTCCTGCTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RSMVTPQLIFLTDPSPNQHSCPG*SSPAWQ Trigger: CTGCCAAGCAGGAGAACTTCATCCTGGGCAGCTGTG...TTGATTAGGGGAGGGGTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR TCA 90 bp | TGCCTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTCCTCCGCTCCTGTCTTaGACTGGTAGCTCTCATCCC | + |
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Preference number: 4 (lower is better) Translates to: CLSGSLPSVPQGMRREKSPPLLS*TGSSHP Trigger: GGGATGAGAGCTACCAGTTCAAGACAGGAGCGGAGG...ACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR TCA 90 bp | CAGGAAGGCAGGGTTAGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACGTTGCAGGGAGACGGTaGAGTATACCAGGGCATCGT | + |
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Preference number: 4 (lower is better) Translates to: QEGRVRSMVTPQLIFLTDVAGRR*SIPGHR Trigger: ACGATGCCCTGGTATACTTCACCGTCTCCCTGCAAC...GTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCTAACCCTGCCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | TGCCTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTTCCTTGAGGATGTCCTaGAGCTGTCTCAGCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: CLSGSLPSVPQGMRREKSSLRMS*SCLSTA Trigger: CGCCGTGCTGAGACAGCTGCAGGACATCCTCAAGGA...ACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | TGCCTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTAGGATGAAGTTCTCCTaGTTGGCAGGGCCCTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: CLSGSLPSVPQGMRREKSRMKFS*LAGPSV Trigger: CACCGAGGGCCCTGCCAAGCAGGAGAACTTCATCCT...ACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CCA 90 bp | CAGGAAGGCAGGGTTAGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACTGGTTCCTGGCATCCTaGATCTGCTGCAGCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: QEGRVRSMVTPQLIFLTDWFLAS*ICCSFH Trigger: GTGGAAGCTGCAGCAGATCCAGGATGCCAGGAACCA...GTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCTAACCCTGCCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR TCA 90 bp | CTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGACCAGCGATCTTGTCCTTaGGCTGCTGGCAGAGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LSGSLPSVPQGMRREKSDQRSCP*AAGRVA Trigger: TGCAACTCTGCCAGCAGCTCAAGGACAAGATCGCTG...GTCACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | CACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCACTGAGGGCATCCCCTTaGAGAGTCAGAGTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRTDGPSTAPDLQGGSSALRASP*RVRVPF Trigger: GAAAGGGACTCTGACTCTGCAAGGGGATGCCCTCAG...TGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | AGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACCCCTCCCCTAATCAATCCCGGAAGGCCAAGTaGAACAACTGGTTGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RSMVTPQLIFLTDPSPNQSRKAK*NNWLFR Trigger: TCGGAACAACCAGTTGTTGCACTTGGCCTTCCGGGA...TTGATTAGGGGAGGGGTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | GGAATGAGGAGGGAGAAAAGTGACAGTGACAGGCACTGCATGGGTACGAGTTGTTCCCGGAAGGCCAAGTaGAACAACTGGTTGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GMRREKSDSDRHCMGTSCSRKAK*NNWLFR Trigger: TCGGAACAACCAGTTGTTGCACTTGGCCTTCCGGGA...ACAACTCGTACCCATGCAGTGCCTGTCACTGTCACTTTTCTCCCTCCTCATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | CACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCAGCATCCTGGATCTGCTaGAGCTTCCACTGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRTDGPSTAPDLQGGSSAASWIC*SFHCLS Trigger: AGACAAGCAGTGGAAGCTGCAGCAGATCCAGGATGC...TGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | CTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGACGCATCCTGGATCTGCTaGAGCTTCCACTGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGSLPSVPQGMRREKSDASWIC*SFHCLS Trigger: AGACAAGCAGTGGAAGCTGCAGCAGATCCAGGATGC...GTCACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | GGAATGAGGAGGGAGAAAAGTGACAGTGACAGGCACTGCATGGGTACGAGTTGTAGCTGCTGGCAGAGTTaGAGGGAGACGGTGAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GMRREKSDSDRHCMGTSCSCWQS*RETVKY Trigger: ATACTTCACCGTCTCCCTGCAACTCTGCCAGCAGCT...ACAACTCGTACCCATGCAGTGCCTGTCACTGTCACTTTTCTCCCTCCTCATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
||
| CDS-3UTR GCA 90 bp | CACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCAAGCTGCTGGCAGAGTTaGAGGGAGACGGTGAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HRTDGPSTAPDLQGGSSASCWQS*RETVKY Trigger: ATACTTCACCGTCTCCCTGCAACTCTGCCAGCAGCT...TGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | AGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACCCCTCCCCTAATCAAATCTTGTCCTTGAGCTaGTGGCAGAGTTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSMVTPQLIFLTDPSPNQILSLS*WQSCRE Trigger: CTCCCTGCAACTCTGCCAGCAGCTCAAGGACAAGAT...TTGATTAGGGGAGGGGTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR GCA 90 bp | CTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGACATCTTGTCCTTGAGCTaGTGGCAGAGTTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSLPSVPQGMRREKSDILSLS*WQSCRE Trigger: CTCCCTGCAACTCTGCCAGCAGCTCAAGGACAAGAT...GTCACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CCA 90 bp | CTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGACATAGCTTGGCTCACATaGTTCCTGGCATCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LSGSLPSVPQGMRREKSDIAWLT*FLASWI Trigger: GATCCAGGATGCCAGGAACCATGTGAGCCAAGCTAT...GTCACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CCA 90 bp | AGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACCCCTCCCCTAATCAAGGGAGCTCCAGTAGCTaGAAAACACAGCGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSMVTPQLIFLTDPSPNQGSSSS*KTQRSC Trigger: ACAAGATCGCTGTGTTTTCCAGCTACTGGAGCTCCC...TTGATTAGGGGAGGGGTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CCA 90 bp | TGCCTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGGGAGCTCCAGTAGCTaGAAAACACAGCGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLSGSLPSVPQGMRREKSGSSSS*KTQRSC Trigger: ACAAGATCGCTGTGTTTTCCAGCTACTGGAGCTCCC...ACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS CCA 90 bp | ACCTCGAGACGCTGTGAGCCCCACTCAAACATAGCGCCGGGGCTGTaGAGCACTGCGCCTCCGGCCGGGCGGAAGTTCTTGGTGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSRRCEPHSNIAPGL*STAPPAGRKFLVEV Trigger: CACCTCCACCAAGAACTTCCGCCCGGCCGGAGGCGCAGTGCTCCACAGCCCCGGCGCTATGTTTGAGTGGGGCTCACAGCGTCTCGAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS GCA 90 bp | CCTTTCACCTGGTCTGTGCCACAGCTGCCCAGGATGAAGTTCTCCTaGTTGGCAGGGCCCTCGGTGCTGGGGCCTGGGAGAGTGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PFTWSVPQLPRMKFS*LAGPSVLGPGRVKR Trigger: CCGCTTCACTCTCCCAGGCCCCAGCACCGAGGGCCCTGCCAAGCAGGAGAACTTCATCCTGGGCAGCTGTGGCACAGACCAGGTGAAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023191.17 ENSMUST00000090453.9 ENSMUST00000201077.2 ENSMUST00000202281.4 |
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| CDS CCA 90 bp | CCGCGTGAGGCCGCTGGCAGCAATCTCCGGCAGGGTGAGGGTGGCTaGGGTAGTGAGCCGGCTTCTGGCTCTAGTCAGTTGCAGCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: PREAAGSNLRQGEGG*GSEPASGSSQLQHN Trigger: GTTATGCTGCAACTGACTAGAGCCAGAAGCCGGCTCACTACCCCAGCCACCCTCACCCTGCCGGAGATTGCTGCCAGCGGCCTCACGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023191.17 ENSMUST00000090453.9 ENSMUST00000202281.4 |
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| CDS GCA 90 bp | AGAGAGGCCTCCTTGAGGATGTCCTGCAGCTGTCTCAGCACGGCGTaGACCTCAGCGTGCAGTAACCAGCGAAACTCCTCCTCCTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: REASLRMSCSCLSTA*TSACSNQRNSSSCG Trigger: TCCGCAGGAGGAGGAGTTTCGCTGGTTACTGCACGCTGAGGTGCACGCCGTGCTGAGACAGCTGCAGGACATCCTCAAGGAGGCCTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201077.2 |
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| CDS TCA 90 bp | TATCACACATTCTACCTTGTGCACGTGGCTCACCTCGAGACGCTGTaGGCCCCACTCAAACATAGCGCCGGGGCTGTGGAGCACTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: YHTFYLVHVAHLETL*APLKHSAGAVEHCA Trigger: GGCGCAGTGCTCCACAGCCCCGGCGCTATGTTTGAGTGGGGCTCACAGCGTCTCGAGGTGAGCCACGTGCACAAGGTAGAATGTGTGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | GTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCAGCCCAGGTCCCTCCGGAGAGAGGCCTCCTaGAGGATGTCCTGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VPVLHLIYREVLPQPRSLRREAS*RMSCSC Trigger: ACAGCTGCAGGACATCCTCAAGGAGGCCTCTCTCCG...GAGGGACCTGGGCTGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS GCA 90 bp | AGAGAGGCCTCCTTGAGGATGTCCTGCAGCTGTCTCAGCACGGCGTaGACCTCAGCGTGCAGTAACCAGCGAAACTCCTCCTCCAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: REASLRMSCSCLSTA*TSACSNQRNSSSST Trigger: AGTACTGGAGGAGGAGTTTCGCTGGTTACTGCACGCTGAGGTGCACGCCGTGCTGAGACAGCTGCAGGACATCCTCAAGGAGGCCTCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023191.17 ENSMUST00000090453.9 ENSMUST00000202281.4 |
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| CDS GCA 90 bp | GTGAGGGTGGCTGGGGTAGTGAGCCGGCTTCTGGCTCTAGTCAGTTaGAGCATAACAGCATCCATGAGCTTGAGGACCTCCGCTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VRVAGVVSRLLALVS*SITASMSLRTSAPV Trigger: GACAGGAGCGGAGGTCCTCAAGCTCATGGATGCTGTTATGCTGCAACTGACTAGAGCCAGAAGCCGGCTCACTACCCCAGCCACCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023191.17 ENSMUST00000090453.9 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | GTCACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGGCCAGGAGGGAGCGCTaGGCTGAGGGCATCCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTEQMVPVLHLIYREVLPARRER*AEGIPL Trigger: CAAGGGGATGCCCTCAGCCAAGCGCTCCCTCCTGGC...CGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023191.17 |
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| CDS CCA 90 bp | AGGGCATCGTTGAGCCAGGGTATCACACATTCTACCTTGTGCACGTaGCTCACCTCGAGACGCTGTGAGCCCCACTCAAACATAGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RASLSQGITHSTLCT*LTSRRCEPHSNIAP Trigger: CGGCGCTATGTTTGAGTGGGGCTCACAGCGTCTCGAGGTGAGCCACGTGCACAAGGTAGAATGTGTGATACCCTGGCTCAACGATGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | CCTCCCCTAATCAAAACACCAAGCCTGCACTCACTTCTCCAGGTGCCTCTCAGGATGAAGTTCTCCTGCTaGGCAGGGCCCTCGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPLIKTPSLHSLLQVPLRMKFSC*AGPSVL Trigger: CAGCACCGAGGGCCCTGCCAAGCAGGAGAACTTCAT...CCTGAGAGGCACCTGGAGAAGTGAGTGCAGGCTTGGTGTTTTGATTAGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | GTCACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGGCCGGGCGGAAGTTCTaGGTGGAGGTGGGTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VTEQMVPVLHLIYREVLPAGRKF*VEVGCR Trigger: CCTGCAACCCACCTCCACCAAGAACTTCCGCCCGGC...CGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | TGCCTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGCCGGGCGGAAGTTCTaGGTGGAGGTGGGTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLSGSLPSVPQGMRREKSAGRKF*VEVGCR Trigger: CCTGCAACCCACCTCCACCAAGAACTTCCGCCCGGC...ACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | GTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCAGCCCAGGTCCCTCACAGCGATCTTGTCCTaGAGCTGCTGGCAGAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPVLHLIYREVLPQPRSLTAILS*SCWQSC Trigger: GCAACTCTGCCAGCAGCTCAAGGACAAGATCGCTGT...GAGGGACCTGGGCTGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | GTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCAGCCCAGGTCCCTCATCACACATTCTACCTaGTGCACGTGGCTCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VPVLHLIYREVLPQPRSLITHST*CTWLTS Trigger: CGAGGTGAGCCACGTGCACAAGGTAGAATGTGTGAT...GAGGGACCTGGGCTGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | GTCACAGAACAGATGGTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGATGAAGTTCTCCTGCTaGGCAGGGCCCTCGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VTEQMVPVLHLIYREVLPMKFSC*AGPSVL Trigger: CAGCACCGAGGGCCCTGCCAAGCAGGAGAACTTCAT...CGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGACCATCTGTTCTGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | GTCCCAGTACTGCACCTGATTTACAGGGAGGTTCTTCCGCAGCCCAGGTCCCTCAAGTGCAACAACTGGTaGTTCCGAGGCATCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPVLHLIYREVLPQPRSLKCNNW*FRGIFR Trigger: CCTGAAGATGCCTCGGAACAACCAGTTGTTGCACTT...GAGGGACCTGGGCTGCGGAAGAACCTCCCTGTAAATCAGGTGCAGTACTGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | GAGGGGCTACAAGTCAGGGCTACCATCTTGGGGGAGGAGTCAGGCAGGTGCTTGTCTGGCTCTAGTCAGTaGCAGCATAACAGCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EGLQVRATILGEESGRCLSGSSQ*QHNSIH Trigger: ATGGATGCTGTTATGCTGCAACTGACTAGAGCCAGA...CAAGCACCTGCCTGACTCCTCCCCCAAGATGGTAGCCCTGACTTGTAGCCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | AGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACCCCTCCCCTAATCAACAGGTTCACATCCGCTaGGCTGAGGGCATCCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSMVTPQLIFLTDPSPNQQVHIR*AEGIPL Trigger: CAAGGGGATGCCCTCAGCCAAGCGGATGTGAACCTG...TTGATTAGGGGAGGGGTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202281.4 |
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| CDS GCA 90 bp | TATACCAGGGCATCGTTGAGCCAGGGTATCACACATTCTACCTTGTaGACGTGGCTCACCTCGAGACGCTGTGAGCCCCACTCAAACATA | + |
|
Preference number: 5 (lower is better) Translates to: YTRASLSQGITHSTL*TWLTSRRCEPHSNI Trigger: TATGTTTGAGTGGGGCTCACAGCGTCTCGAGGTGAGCCACGTGCACAAGGTAGAATGTGTGATACCCTGGCTCAACGATGCCCTGGTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | AGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACCCCTCCCCTAATCAAACAGCGATCTTGTCCTaGAGCTGCTGGCAGAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSMVTPQLIFLTDPSPNQTAILS*SCWQSC Trigger: GCAACTCTGCCAGCAGCTCAAGGACAAGATCGCTGT...TTGATTAGGGGAGGGGTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | AGGAGCATGGTCACACCTCAGCTCATCTTCTTGACTGACCCCTCCCCTAATCAAATCACACATTCTACCTaGTGCACGTGGCTCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RSMVTPQLIFLTDPSPNQITHST*CTWLTS Trigger: CGAGGTGAGCCACGTGCACAAGGTAGAATGTGTGAT...TTGATTAGGGGAGGGGTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | GGAATGAGGAGGGAGAAAAGTGACAGTGACAGGCACTGCATGGGTACGAGTTGTGAAAACACAGCGATCTaGTCCTTGAGCTGCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GMRREKSDSDRHCMGTSCENTAI*SLSCWQ Trigger: CTGCCAGCAGCTCAAGGACAAGATCGCTGTGTTTTC...ACAACTCGTACCCATGCAGTGCCTGTCACTGTCACTTTTCTCCCTCCTCATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | TGCCTCTCAGGTTCACTGCCATCAGTACCACAGGGAATGAGGAGGGAGAAAAGTGAAAACACAGCGATCTaGTCCTTGAGCTGCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLSGSLPSVPQGMRREKSENTAI*SLSCWQ Trigger: CTGCCAGCAGCTCAAGGACAAGATCGCTGTGTTTTC...ACTTTTCTCCCTCCTCATTCCCTGTGGTACTGATGGCAGTGAACCTGAGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS-3UTR CAA 90 bp | GGAATGAGGAGGGAGAAAAGTGACAGTGACAGGCACTGCATGGGTACGAGTTGTTCTGGCTCTAGTCAGTaGCAGCATAACAGCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GMRREKSDSDRHCMGTSCSGSSQ*QHNSIH Trigger: ATGGATGCTGTTATGCTGCAACTGACTAGAGCCAGA...ACAACTCGTACCCATGCAGTGCCTGTCACTGTCACTTTTCTCCCTCCTCATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
||
| CDS GCA 72 bp | GCCCCACTCAAACATAGCGCCGGGGCTGTGGAGCACTaGGCCTCCGGCCGGGCGGAAGTTCTTGGTGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: APLKHSAGAVEH*ASGRAEVLGGG Trigger: ACCTCCACCAAGAACTTCCGCCCGGCCGGAGGCGCAGTGCTCCACAGCCCCGGCGCTATGTTTGAGTGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS CCA 72 bp | GGCCCTAGGCGCCTCAGCCAGCCAGGAGGGAGCGCTTaGCTGAGGGCATCCCCTTGCAGAGTCAGAGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPRRLSQPGGSA*LRASPCRVRVP Trigger: AGGGACTCTGACTCTGCAAGGGGATGCCCTCAGCCAAGCGCTCCCTCCTGGCTGGCTGAGGCGCCTAGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023191.17 |
||
| CDS CCA 72 bp | CGCTGTGAGCCCCACTCAAACATAGCGCCGGGGCTGTaGAGCACTGCGCCTCCGGCCGGGCGGAAGTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RCEPHSNIAPGL*STAPPAGRKFL Trigger: CAAGAACTTCCGCCCGGCCGGAGGCGCAGTGCTCCACAGCCCCGGCGCTATGTTTGAGTGGGGCTCACAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
||
| CDS GCA 72 bp | TGGTCTGTGCCACAGCTGCCCAGGATGAAGTTCTCCTaGTTGGCAGGGCCCTCGGTGCTGGGGCCTGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: WSVPQLPRMKFS*LAGPSVLGPGR Trigger: TCTCCCAGGCCCCAGCACCGAGGGCCCTGCCAAGCAGGAGAACTTCATCCTGGGCAGCTGTGGCACAGACCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023191.17 ENSMUST00000090453.9 ENSMUST00000201077.2 ENSMUST00000202281.4 |
||
| CDS CAA 72 bp | CCAGCCAGGAGGGAGCGCTTGGCTGAGGGCATCCCCTaGCAGAGTCAGAGTCCCTTTCACCTGGTCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PARRERLAEGIP*QSQSPFHLVCA Trigger: GGCACAGACCAGGTGAAAGGGACTCTGACTCTGCAAGGGGATGCCCTCAGCCAAGCGCTCCCTCCTGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023191.17 |
||
| CDS GCA 72 bp | AGAGTGAAGCGGAGAGAGGCCTCCTTGAGGATGTCCTaGAGCTGTCTCAGCACGGCGTGCACCTCAGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RVKRREASLRMS*SCLSTACTSAC Trigger: GCACGCTGAGGTGCACGCCGTGCTGAGACAGCTGCAGGACATCCTCAAGGAGGCCTCTCTCCGCTTCACTCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023191.17 ENSMUST00000090453.9 ENSMUST00000201077.2 ENSMUST00000202281.4 |
||
| CDS GCA 72 bp | TCCTGCAGCTGTCTCAGCACGGCGTGCACCTCAGCGTaGAGTAACCAGCGAAACTCCTCCTCCTGCGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: SCSCLSTACTSA*SNQRNSSSCGQ Trigger: CTGTCCGCAGGAGGAGGAGTTTCGCTGGTTACTGCACGCTGAGGTGCACGCCGTGCTGAGACAGCTGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201077.2 |
||
| CDS TCA 72 bp | TTCTACCTTGTGCACGTGGCTCACCTCGAGACGCTGTaGGCCCCACTCAAACATAGCGCCGGGGCTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FYLVHVAHLETL*APLKHSAGAVE Trigger: CTCCACAGCCCCGGCGCTATGTTTGAGTGGGGCTCACAGCGTCTCGAGGTGAGCCACGTGCACAAGGTAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS GCA 72 bp | TCCTGCAGCTGTCTCAGCACGGCGTGCACCTCAGCGTaGAGTAACCAGCGAAACTCCTCCTCCAGTACTGCC | + |
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Preference number: 6 (lower is better) Translates to: SCSCLSTACTSA*SNQRNSSSSTA Trigger: GGCAGTACTGGAGGAGGAGTTTCGCTGGTTACTGCACGCTGAGGTGCACGCCGTGCTGAGACAGCTGCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023191.17 ENSMUST00000090453.9 ENSMUST00000202281.4 |
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| CDS GCA 72 bp | TCCTTGAGGATGTCCTGCAGCTGTCTCAGCACGGCGTaGACCTCAGCGTGCAGTAACCAGCGAAACTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLRMSCSCLSTA*TSACSNQRNSS Trigger: GGAGGAGTTTCGCTGGTTACTGCACGCTGAGGTGCACGCCGTGCTGAGACAGCTGCAGGACATCCTCAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023191.17 ENSMUST00000090453.9 ENSMUST00000201077.2 ENSMUST00000202281.4 |
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| CDS GCA 72 bp | GGGCGGAAGTTCTTGGTGGAGGTGGGTTGCAGGGCGTaGAGCTGGTATACAGTGAGGCACAGCTTGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GRKFLVEVGCRA*SWYTVRHSLLR Trigger: CCTCAACAAGCTGTGCCTCACTGTATACCAGCTGCACGCCCTGCAACCCACCTCCACCAAGAACTTCCGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS CAA 90 bp | GGTGAGGGTGGCTGGGGTAGTGAGCCGGCTTCTGGCTCTAGTCAGTaGCAGCATAACAGCATCCATGAGCTTGAGGACCTCCGCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GEGGWGSEPASGSSQ*QHNSIHELEDLRSC Trigger: ACAGGAGCGGAGGTCCTCAAGCTCATGGATGCTGTTATGCTGCAACTGACTAGAGCCAGAAGCCGGCTCACTACCCCAGCCACCCTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023191.17 ENSMUST00000090453.9 ENSMUST00000202281.4 |
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| CDS GCA 72 bp | GCATCGTTGAGCCAGGGTATCACACATTCTACCTTGTaGACGTGGCTCACCTCGAGACGCTGTGAGCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: ASLSQGITHSTL*TWLTSRRCEPH Trigger: GTGGGGCTCACAGCGTCTCGAGGTGAGCCACGTGCACAAGGTAGAATGTGTGATACCCTGGCTCAACGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS CAA 72 bp | AGGGCATCGTTGAGCCAGGGTATCACACATTCTACCTaGTGCACGTGGCTCACCTCGAGACGCTGTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RASLSQGITHST*CTWLTSRRCEP Trigger: GGGCTCACAGCGTCTCGAGGTGAGCCACGTGCACAAGGTAGAATGTGTGATACCCTGGCTCAACGATGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS CAA 72 bp | CTTCAGGTTCACATCCGCTTGGCTGAGGGCATCCCCTaGCAGAGTCAGAGTCCCTTTCACCTGGTCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LQVHIRLAEGIP*QSQSPFHLVCA Trigger: GGCACAGACCAGGTGAAAGGGACTCTGACTCTGCAAGGGGATGCCCTCAGCCAAGCGGATGTGAACCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090453.9 ENSMUST00000201077.2 ENSMUST00000202281.4 |
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| CDS CAA 90 bp | TGCTGGCAGAGTTGCAGGGAGACGGTGAAGTATACCAGGGCATCGTaGAGCCAGGGTATCACACATTCTACCTTGTGCACGTGGCTCACC | + |
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Preference number: 6 (lower is better) Translates to: CWQSCRETVKYTRAS*SQGITHSTLCTWLT Trigger: GGTGAGCCACGTGCACAAGGTAGAATGTGTGATACCCTGGCTCAACGATGCCCTGGTATACTTCACCGTCTCCCTGCAACTCTGCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS CAA 90 bp | AGCTTCCACTGCTTGTCTTCCCGGAAGGCCAAGTGCAACAACTGGTaGTTCCGAGGCATCTTCAGGTTCACATCCGCTTGGCTGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SFHCLSSRKAKCNNW*FRGIFRFTSAWLRA Trigger: TGCCCTCAGCCAAGCGGATGTGAACCTGAAGATGCCTCGGAACAACCAGTTGTTGCACTTGGCCTTCCGGGAAGACAAGCAGTGGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090453.9 ENSMUST00000201077.2 ENSMUST00000202281.4 |
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| CDS CCA 72 bp | TTGAGCCAGGGTATCACACATTCTACCTTGTGCACGTaGCTCACCTCGAGACGCTGTGAGCCCCACTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LSQGITHSTLCT*LTSRRCEPHSN Trigger: GTTTGAGTGGGGCTCACAGCGTCTCGAGGTGAGCCACGTGCACAAGGTAGAATGTGTGATACCCTGGCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS CAA 90 bp | AAGTATACCAGGGCATCGTTGAGCCAGGGTATCACACATTCTACCTaGTGCACGTGGCTCACCTCGAGACGCTGTGAGCCCCACTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: KYTRASLSQGITHST*CTWLTSRRCEPHSN Trigger: GTTTGAGTGGGGCTCACAGCGTCTCGAGGTGAGCCACGTGCACAAGGTAGAATGTGTGATACCCTGGCTCAACGATGCCCTGGTATACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS GCA 72 bp | AACACAGCGATCTTGTCCTTGAGCTGCTGGCAGAGTTaGAGGGAGACGGTGAAGTATACCAGGGCATCGTTG | + |
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Preference number: 6 (lower is better) Translates to: NTAILSLSCWQS*RETVKYTRASL Trigger: CAACGATGCCCTGGTATACTTCACCGTCTCCCTGCAACTCTGCCAGCAGCTCAAGGACAAGATCGCTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS CCA 72 bp | AAGTTCTTGGTGGAGGTGGGTTGCAGGGCGTGCAGCTaGTATACAGTGAGGCACAGCTTGTTGAGGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: KFLVEVGCRACS*YTVRHSLLRLM Trigger: CATCAACCTCAACAAGCTGTGCCTCACTGTATACCAGCTGCACGCCCTGCAACCCACCTCCACCAAGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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| CDS CCA 72 bp | CACTGCTTGTCTTCCCGGAAGGCCAAGTGCAACAACTaGTTGTTCCGAGGCATCTTCAGGTTCACATCCGCT | + |
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Preference number: 6 (lower is better) Translates to: HCLSSRKAKCNN*LFRGIFRFTSA Trigger: AGCGGATGTGAACCTGAAGATGCCTCGGAACAACCAGTTGTTGCACTTGGCCTTCCGGGAAGACAAGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090453.9 ENSMUST00000201077.2 ENSMUST00000202281.4 |
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| CDS CAA 72 bp | TGCTTGTCTTCCCGGAAGGCCAAGTGCAACAACTGGTaGTTCCGAGGCATCTTCAGGTTCACATCCGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CLSSRKAKCNNW*FRGIFRFTSAW Trigger: CCAAGCGGATGTGAACCTGAAGATGCCTCGGAACAACCAGTTGTTGCACTTGGCCTTCCGGGAAGACAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090453.9 ENSMUST00000201077.2 ENSMUST00000202281.4 |
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| CDS CAA 90 bp | AGCTTCCACTGCTTGTCTTCCCGGAAGGCCAAGTGCAACAACTGGTaGTTCCGAGGCATCTTCAGGTTCACATCCTGTGAGCCAGCAATG | + |
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Preference number: 6 (lower is better) Translates to: SFHCLSSRKAKCNNW*FRGIFRFTSCEPAM Trigger: CATTGCTGGCTCACAGGATGTGAACCTGAAGATGCCTCGGAACAACCAGTTGTTGCACTTGGCCTTCCGGGAAGACAAGCAGTGGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023191.17 |
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| CDS CCA 72 bp | CACTGCTTGTCTTCCCGGAAGGCCAAGTGCAACAACTaGTTGTTCCGAGGCATCTTCAGGTTCACATCCTGT | + |
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Preference number: 6 (lower is better) Translates to: HCLSSRKAKCNN*LFRGIFRFTSC Trigger: ACAGGATGTGAACCTGAAGATGCCTCGGAACAACCAGTTGTTGCACTTGGCCTTCCGGGAAGACAAGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023191.17 |
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| CDS CAA 72 bp | TGCTTGTCTTCCCGGAAGGCCAAGTGCAACAACTGGTaGTTCCGAGGCATCTTCAGGTTCACATCCTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: CLSSRKAKCNNW*FRGIFRFTSCE Trigger: CTCACAGGATGTGAACCTGAAGATGCCTCGGAACAACCAGTTGTTGCACTTGGCCTTCCGGGAAGACAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023191.17 |
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| CDS CAA 72 bp | AGTTGCAGGGAGACGGTGAAGTATACCAGGGCATCGTaGAGCCAGGGTATCACACATTCTACCTTGTGCACG | + |
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Preference number: 6 (lower is better) Translates to: SCRETVKYTRAS*SQGITHSTLCT Trigger: CGTGCACAAGGTAGAATGTGTGATACCCTGGCTCAACGATGCCCTGGTATACTTCACCGTCTCCCTGCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023191.17 ENSMUST00000202281.4 |
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