Pregenerated sensors for ROCK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020580Ensembl transcript IDs: ENSMUST00000020904.8, ENSMUST00000220688.2, ENSMUST00000221463.2
Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCAGGTTCTGAAACCTGGTCCTGCTGCATATGACTGTGACCTTTaGCAGATAATCTTTATGTGCCTTTGGGAGGCAGAAGCAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: VQVLKPGPAAYDCDL*QIIFMCLWEAEAGR Trigger: TCTGCCTGCTTCTGCCTCCCAAAGGCACATAAAGATTATCTGCCAAAGGTCACAGTCATATGCAGCAGGACCAGGTTTCAGAACCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR TCA 90 bp | TATTACAGTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTaGGGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: YYSCKQKSPQGKEQR*GPREQHSALSHSAC Trigger: ACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAACTGTAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR GCA 90 bp | GGTCCTGCTGCATATGACTGTGACCTTTGGCAGATAATCTTTATGTaGCTTTGGGAGGCAGAAGCAGGCAGATCTTTGGACATTTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: GPAAYDCDLWQIIFM*LWEAEAGRSLDISV Trigger: TACAGAAATGTCCAAAGATCTGCCTGCTTCTGCCTCCCAAAGGCACATAAAGATTATCTGCCAAAGGTCACAGTCATATGCAGCAGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR CCA 90 bp | AAACTGGGCCATCTGAAGGTCACAGAACTGGATTTAGTATATCAGTaGGCCAACAGCCACTATTTCCACAATAGTAACTATAGCGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: KLGHLKVTELDLVYQ*ANSHYFHNSNYSED Trigger: ATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTTGGCCCACTGATATACTAAATCCAGTTCTGTGACCTTCAGATGGCCCAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR TCA 90 bp | CAACTAACTTCATCCTCTCCAGTAGTAGTAGTTAGATGTAACTGCTaGACCACCTCTCTAGCCTCCTTTAAAGACATTTTTGGGCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: QLTSSSPVVVVRCNC*TTSLASFKDIFGLL Trigger: TAGGAGCCCAAAAATGTCTTTAAAGGAGGCTAGAGAGGTGGTTCAGCAGTTACATCTAACTACTACTACTGGAGAGGATGAAGTTAGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR TCA 90 bp | CTACCCTCAGCAGCATTTAACAGTGAAAATCAAATTAAGCACTTTTaGAGCTGCCTCTTCCCAGATATCAAAGCTGAAATATTGCCACAC | + |
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Preference number: 1 (lower is better) Translates to: LPSAAFNSENQIKHF*SCLFPDIKAEILPH Trigger: GTGTGGCAATATTTCAGCTTTGATATCTGGGAAGAGGCAGCTTCAAAAGTGCTTAATTTGATTTTCACTGTTAAATGCTGCTGAGGGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR GCA 90 bp | GCCATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGCAACCAGAGCACAGCTaGTTCCAGGGAAATGGCATG | + |
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Preference number: 2 (lower is better) Translates to: AMASQRLATNSSLPLGSQQPEHS*FQGNGM Trigger: CATGCCATTTCCCTGGAAGCAGCTGTGCTCTGGTTG...CTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR CCA 90 bp | GCCATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGATGCGCGCGCACGTGTaGTGTATGTATGTGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: AMASQRLATNSSLPLGSQMRAHV*CMYVSQ Trigger: CTGAGACACATACATACACCACACGTGCGCGCGCAT...CTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTAGGTTTGGGGAGGAAATaGCAGGCATGCGCACCCACA | + |
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Preference number: 2 (lower is better) Translates to: GPREQHSALSHSACQSALGLGRK*QACAPT Trigger: TGTGGGTGCGCATGCCTGCCATTTCCTCCCCAAACC...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTCCCCACAAAGCAAGCTaGATCCTAAGAGCTGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: HGLSKVGHKQQPSLGITVPHKAS*ILRAGK Trigger: TTTACCAGCTCTTAGGATGCAGCTTGCTTTGTGGGG...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACGCAAACTGGGCCATCTaGAGGTCACAGAACTGGATT | + |
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Preference number: 2 (lower is better) Translates to: VANKSHHRERNKGEVPGNANWAI*RSQNWI Trigger: AATCCAGTTCTGTGACCTTCAGATGGCCCAGTTTGC...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGCTCACTATACATACCTTGAACTTACAGAGATCTGCCTGCCTCTGCCTCGTTAAGAGCACTGACTaGTCTTACAGAGGGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LELTIHTLNLQRSACLCLVKSTD*SYRGPE Trigger: CTCAGGCCCTCTGTAAGAGCAGTCAGTGCTCTTAAC...GAGGCAGAGGCAGGCAGATCTCTGTAAGTTCAAGGTATGTATAGTGAGCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR GCA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGCTCACTGCTGCACTCTaGTGTGGGGTTAAGCACACT | + |
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Preference number: 2 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLLTAAL*CGVKHT Trigger: AGTGTGCTTAACCCCACAGCAGAGTGCAGCAGTGAG...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGGTCAGTACAGCCATAGCTGGCCTCCCACCGTATCACCACTTCAATTCCAAAGCTGAAATGTGCTaGTCTTTAGGTCACAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: SEVSTAIAGLPPYHHFNSKAEMC*SLGHRV Trigger: AACCCTGTGACCTAAAGAGCAGCACATTTCAGCTTT...GGAATTGAAGTGGTGATACGGTGGGAGGCCAGCTATGGCTGTACTGACCTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR CAA 90 bp | GTTGAGTACAGCTATGTAAGTCCAAATAAGGGTGTTGGATCCACCTaGGGCCTGAGGTTACAGGTAATTGTGAGCCACCTAAAGCGAGTG | + |
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Preference number: 2 (lower is better) Translates to: VEYSYVSPNKGVGST*GLRLQVIVSHLKRV Trigger: CACTCGCTTTAGGTGGCTCACAATTACCTGTAACCTCAGGCCCAAGGTGGATCCAACACCCTTATTTGGACTTACATAGCTGTACTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR GCA 90 bp | GCCATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTGTCATATTGAACTTTaGATATGTACAGAGCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: AMASQRLATNSSLPLGSQCHIEL*ICTEPD Trigger: ATCAGGCTCTGTACATATGCAAAGTTCAATATGACA...CTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTTCCAGGGAAATGGCATaGACATGTAATCTTAACAGA | + |
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Preference number: 2 (lower is better) Translates to: HGLSKVGHKQQPSLGITVSREMA*TCNLNR Trigger: TCTGTTAAGATTACATGTGCATGCCATTTCCCTGGA...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR GCA 90 bp | CATGTTGAGTACAGCTATGTAAGTCCAAATAAGGGTGTTGGATCCACCTTGGGCACTCAAACTCAGAGATaGTCTTGCCTCTGCCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: HVEYSYVSPNKGVGSTLGTQTQR*SCLCPK Trigger: CTTGGGGCAGAGGCAAGAGCATCTCTGAGTTTGAGT...GCCCAAGGTGGATCCAACACCCTTATTTGGACTTACATAGCTGTACTCAACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACACAGCAGCCTTCCCTTaGGATCACAGTTTTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: VANKSHHRERNKGEVPGNTAAFP*DHSFVL Trigger: CAAAACAAAACTGTGATCCCAAGGGAAGGCTGCTGT...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTTGAGTACAGCTATGTAAGTCCAAATAAGGGTGTTGGATCCACCTTGGGCTGTGGGAGATGTTTGTaGTCTGATAGTAGCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: HVEYSYVSPNKGVGSTLGCGRCL*SDSSQC Trigger: GCACTGGCTACTATCAGATCACAAACATCTCCCACA...GCCCAAGGTGGATCCAACACCCTTATTTGGACTTACATAGCTGTACTCAACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGCTCACTATACATACCTTGAACTTACAGAGATCTGCCTGCCTCTGCCTCCAGATAATCTTTATGTaGCTTTGGGAGGCAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LELTIHTLNLQRSACLCLQIIFM*LWEAEA Trigger: TGCTTCTGCCTCCCAAAGGCACATAAAGATTATCTG...GAGGCAGAGGCAGGCAGATCTCTGTAAGTTCAAGGTATGTATAGTGAGCTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTATGTTGTAATGACTGTTaGTTTGGGGAGGAAATGGCA | + |
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Preference number: 2 (lower is better) Translates to: GPREQHSALSHSACQSALCCNDC*FGEEMA Trigger: TGCCATTTCCTCCCCAAACCAACAGTCATTACAACA...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGGACTTAGGCTTCATCTCCACATCACATTACCATTTTCTACTGGCACATCTTTACAGAGATCTGCCTaGCTCTGCCTCTCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: VGLRLHLHITLPFSTGTSLQRSA*LCLSSA Trigger: AGCACTTGAGAGGCAGAGGCAGGCAGATCTCTGTAA...AGATGTGCCAGTAGAAAATGGTAATGTGATGTGGAGATGAAGCCTAAGTCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCCAAGTGCTGGGACTAATGGTATATGTCACCACACCCAGCTCATTTTATCACCAGAAAGTTTCATATaGGCTATTTGTGGGAGATGT | + |
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Preference number: 2 (lower is better) Translates to: APSAGTNGICHHTQLILSPESFI*AICGRC Trigger: ACATCTCCCACAAATAGCTCATATGAAACTTTCTGG...TGATAAAATGAGCTGGGTGTGGTGACATATACCATTAGTCCCAGCACTTGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR GCA 90 bp | CATGTTGAGTACAGCTATGTAAGTCCAAATAAGGGTGTTGGATCCACCTTGGGCACTAAAGCTGAAATGTaGTGCTCTTTAGGTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: HVEYSYVSPNKGVGSTLGTKAEM*CSLGHR Trigger: CCTGTGACCTAAAGAGCAGCACATTTCAGCTTTAGT...GCCCAAGGTGGATCCAACACCCTTATTTGGACTTACATAGCTGTACTCAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGGACTTAGGCTTCATCTCCACATCACATTACCATTTTCTACTGGCACATCTATCTTTATGTGCCTTTaGGAGGCAGAAGCAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VGLRLHLHITLPFSTGTSIFMCL*EAEAGR Trigger: TCTGCCTGCTTCTGCCTCCCAAAGGCACATAAAGAT...AGATGTGCCAGTAGAAAATGGTAATGTGATGTGGAGATGAAGCCTAAGTCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGCTCACTATACATACCTTGAACTTACAGAGATCTGCCTGCCTCTGCCTCTATGACTGTGACCTTTaGCAGATAATCTTTATGTGC | + |
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Preference number: 2 (lower is better) Translates to: LELTIHTLNLQRSACLCLYDCDL*QIIFMC Trigger: GCACATAAAGATTATCTGCCAAAGGTCACAGTCATA...GAGGCAGAGGCAGGCAGATCTCTGTAAGTTCAAGGTATGTATAGTGAGCTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCCAAGTGCTGGGACTAATGGTATATGTCACCACACCCAGCTCATTTTATCAGAGAAATGGCTCTTCTaGAGGCAAATACATAATGAA | + |
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Preference number: 2 (lower is better) Translates to: APSAGTNGICHHTQLILSEKWLF*RQIHNE Trigger: TTCATTATGTATTTGCCTTCAGAAGAGCCATTTCTC...TGATAAAATGAGCTGGGTGTGGTGACATATACCATTAGTCCCAGCACTTGGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGGACTTAGGCTTCATCTCCACATCACATTACCATTTTCTACTGGCACATCTCCCAGTATGTGTGTATaGATGTCCCTAAATCCAACC | + |
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Preference number: 2 (lower is better) Translates to: VGLRLHLHITLPFSTGTSPSMCV*MSLNPT Trigger: GGTTGGATTTAGGGACATGCATACACACATACTGGG...AGATGTGCCAGTAGAAAATGGTAATGTGATGTGGAGATGAAGCCTAAGTCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTAAAGCAGTATTTGTGCTaGTACACATTTATCTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GPREQHSALSHSACQSALKQYLC*YTFILK Trigger: CTTCAAGATAAATGTGTACCAGCACAAATACTGCTT...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR TCA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGAGTTGTATCACATCATaGTTCTCCAAACTCTTACAC | + |
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Preference number: 2 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLSCITS*FSKLLH Trigger: GTGTAAGAGTTTGGAGAATCATGATGTGATACAACT...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR TCA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGGATGTTTTATTCCCCTaGATCCTTCACATTAATTGC | + |
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Preference number: 2 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLDVLFP*ILHINC Trigger: GCAATTAATGTGAAGGATTCAGGGGAATAAAACATC...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGTTAAGGCATTCAAAATaGGTAAAGCTGCCTACCTTA | + |
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Preference number: 2 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLLRHSK*VKLPTL Trigger: TAAGGTAGGCAGCTTTACCCATTTTGAATGCCTTAA...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACATCTCTTTATGACGCAGTCTaGGAGAACTGCAGGACACCT | + |
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Preference number: 2 (lower is better) Translates to: ATISTIVTIARIKVFTTSLYDAV*ENCRTP Trigger: AGGTGTCCTGCAGTTCTCCCAGACTGCGTCATAAAG...AGATGTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGGACTTAGGCTTCATCTCCACATCACATTACCATTTTCTACTGGCACATCTTCGCACTCACATATGTaGATTAAAACTGAAACTGCT | + |
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Preference number: 2 (lower is better) Translates to: VGLRLHLHITLPFSTGTSSHSHM*IKTETA Trigger: AGCAGTTTCAGTTTTAATTCACATATGTGAGTGCGA...AGATGTGCCAGTAGAAAATGGTAATGTGATGTGGAGATGAAGCCTAAGTCCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGGACTTAGGCTTCATCTCCACATCACATTACCATTTTCTACTGGCACATCTATTAAAGGCACGCACTaGTTCACTAAGAAAACATTC | + |
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Preference number: 2 (lower is better) Translates to: VGLRLHLHITLPFSTGTSIKGTH*FTKKTF Trigger: GAATGTTTTCTTAGTGAAGCAGTGCGTGCCTTTAAT...AGATGTGCCAGTAGAAAATGGTAATGTGATGTGGAGATGAAGCCTAAGTCCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR CAA 90 bp | ATCCAAGATGACTCTCTAAATCATGCAGTTTATAACTTATTACAGTaGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: IQDDSLNHAVYNLLQ*QTKVTTGKGTKVRS Trigger: GGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAACTGTAATAAGTTATAAACTGCATGATTTAGAGAGTCATCTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR TCA 90 bp | GCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACATCTCCCAGATATCAAAGCTaGAATATTGCCACACACAGA | + |
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Preference number: 2 (lower is better) Translates to: ATISTIVTIARIKVFTTSPRYQS*NIATHR Trigger: TCTGTGTGTGGCAATATTTCAGCTTTGATATCTGGG...AGATGTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR CCA 72 bp | GAGCAAAGCCCTCTAGGGCCATGGCCTCTCAAAGGTTaGCCACAAACAGCAGCCTTCCCTTGGGATCACAGT | + |
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Preference number: 3 (lower is better) Translates to: EQSPLGPWPLKG*PQTAAFPWDHS Trigger: ACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGCCCTAGAGGGCTTTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR GCA 72 bp | CACCCTGGGAACCCTAACAGACTGACAGCAGCAGTATaGCATCTTCAGTTGGTTTGGCAGCCTCGAGCATGT | + |
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Preference number: 3 (lower is better) Translates to: HPGNPNRLTAAV*HLQLVWQPRAC Trigger: ACATGCTCGAGGCTGCCAAACCAACTGAAGATGGCATACTGCTGCTGTCAGTCTGTTAGGGTTCCCAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGCTCACTATACATACCTTGAACTTACAGAGATCTGCCTGCCTCTGCCTCAACTCAGAGATGCTCTaGCCTCTGCCCCAAGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LELTIHTLNLQRSACLCLNSEML*PLPQVL Trigger: CAGCACTTGGGGCAGAGGCAAGAGCATCTCTGAGTT...GAGGCAGAGGCAGGCAGATCTCTGTAAGTTCAAGGTATGTATAGTGAGCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGCTCACTATACATACCTTGAACTTACAGAGATCTGCCTGCCTCTGCCTCGGTGTTGGATCCACCTaGGGCCTGAGGTTACAGGTA | + |
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Preference number: 3 (lower is better) Translates to: LELTIHTLNLQRSACLCLGVGST*GLRLQV Trigger: TACCTGTAACCTCAGGCCCAAGGTGGATCCAACACC...GAGGCAGAGGCAGGCAGATCTCTGTAAGTTCAAGGTATGTATAGTGAGCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR GCA 72 bp | GTAATGACTGTTGGTTTGGGGAGGAAATGGCAGGCATaGGCACCCACATACATGGAGATGAGTGCGAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: VMTVGLGRKWQA*APTYMEMSAKS Trigger: ACTCTTCGCACTCATCTCCATGTATGTGGGTGCGCATGCCTGCCATTTCCTCCCCAAACCAACAGTCATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR GCA 72 bp | ACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTaGTTTAACATTGGCTGTGGCACCTCCACGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: TTLSTVTQCLSK*FNIGCGTSTSQ Trigger: CTGGCTCGTGGAGGTGCCACAGCCAATGTTAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR CAA 90 bp | GCCATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGACTCACCGACCACTTTaGTTCAACTTGTTTCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: AMASQRLATNSSLPLGSQTHRPL*FNLFQS Trigger: ACTTTGAAACAAGTTGAACAAAAGTGGTCGGTGAGT...CTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGCTCACTATACATACCTTGAACTTACAGAGATCTGCCTGCCTCTGCCTCAATCTTTATGTGCCTTaGGGAGGCAGAAGCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LELTIHTLNLQRSACLCLNLYVP*GGRSRQ Trigger: CTGCCTGCTTCTGCCTCCCAAAGGCACATAAAGATT...GAGGCAGAGGCAGGCAGATCTCTGTAAGTTCAAGGTATGTATAGTGAGCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| 3UTR TCA 72 bp | AGTTTCTCTTCCTTCACCCTGGGAACCCTAACAGACTaGCAGCAGCAGTATGCCATCTTCAGTTGGTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SFSSFTLGTLTD*QQQYAIFSWFG Trigger: GCCAAACCAACTGAAGATGGCATACTGCTGCTGTCAGTCTGTTAGGGTTCCCAGGGTGAAGGAAGAGAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR CCA 72 bp | AGACTGACAGCAGCAGTATGCCATCTTCAGTTGGTTTaGCAGCCTCGAGCATGTCTCACTAGGATCTACACA | + |
|
Preference number: 3 (lower is better) Translates to: RLTAAVCHLQLV*QPRACLTRIYT Trigger: TGTGTAGATCCTAGTGAGACATGCTCGAGGCTGCCAAACCAACTGAAGATGGCATACTGCTGCTGTCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTTGGTACACATTTATCTaGAAGGATTGGAGGCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: HGLSKVGHKQQPSLGITVWYTFI*KDWRPQ Trigger: TTGAGGCCTCCAATCCTTCAAGATAAATGTGTACCA...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR CCA 72 bp | ACTGGCACAAAATTAGGTTGTTGTTGTAATGACTGTTaGTTTGGGGAGGAAATGGCAGGCATGCGCACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TGTKLGCCCNDC*FGEEMAGMRTH Trigger: GTGGGTGCGCATGCCTGCCATTTCCTCCCCAAACCAACAGTCATTACAACAACAACCTAATTTTGTGCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTTTTCAGTCTTGTAGCTaGAAGAATACGATCACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HGLSKVGHKQQPSLGITVFQSCS*KNTITF Trigger: GAAGGTGATCGTATTCTTCAAGCTACAAGACTGAAA...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGCTCACTATACATACCTTGAACTTACAGAGATCTGCCTGCCTCTGCCTCGAAGCAGGCAGATCTTaGGACATTTCTGTAGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: LELTIHTLNLQRSACLCLEAGRS*DISVGS Trigger: AGATCCTACAGAAATGTCCAAAGATCTGCCTGCTTC...GAGGCAGAGGCAGGCAGATCTCTGTAAGTTCAAGGTATGTATAGTGAGCTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| 3UTR TCA 72 bp | ACTCTTCTCAGTCCTGTGCAATGTAGTGTGACTTTATaGCGCAGTCTGGGAGAACTGCAGGACACCTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: TLLSPVQCSVTL*RSLGELQDTFT Trigger: AGTAAAGGTGTCCTGCAGTTCTCCCAGACTGCGTCATAAAGTCACACTACATTGCACAGGACTGAGAAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR GCA 72 bp | CCCAACCAGAGCACAGCTGCTTCCAGGGAAATGGCATaGACATGTAATCTTAACAGAAAGCATGAAAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: PNQSTAASREMA*TCNLNRKHERC Trigger: GCATCTTTCATGCTTTCTGTTAAGATTACATGTGCATGCCATTTCCCTGGAAGCAGCTGTGCTCTGGTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR GCA 72 bp | GCATATGACTGTGACCTTTGGCAGATAATCTTTATGTaGCTTTGGGAGGCAGAAGCAGGCAGATCTTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: AYDCDLWQIIFM*LWEAEAGRSLD Trigger: GTCCAAAGATCTGCCTGCTTCTGCCTCCCAAAGGCACATAAAGATTATCTGCCAAAGGTCACAGTCATATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| 3UTR CCA 72 bp | ACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTaGTACACATTTATCTTGAAGGATTGGAGGCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TALGDQRKQYLC*YTFILKDWRPQ Trigger: TTGAGGCCTCCAATCCTTCAAGATAAATGTGTACCAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR CCA 72 bp | CTGAAACCTGGTCCTGCTGCATATGACTGTGACCTTTaGCAGATAATCTTTATGTGCCTTTGGGAGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LKPGPAAYDCDL*QIIFMCLWEAE Trigger: TTCTGCCTCCCAAAGGCACATAAAGATTATCTGCCAAAGGTCACAGTCATATGCAGCAGGACCAGGTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| 3UTR GCA 72 bp | TTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTaGTGGTACACATTTATCTTGAAGGATTGGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: FTALGDQRKQYL*WYTFILKDWRP Trigger: AGGCCTCCAATCCTTCAAGATAAATGTGTACCAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR TCA 72 bp | TTCTTTAAACTCTTCTCAGTCCTGTGCAATGTAGTGTaGCTTTATGACGCAGTCTGGGAGAACTGCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: FFKLFSVLCNVV*LYDAVWENCRT Trigger: TGTCCTGCAGTTCTCCCAGACTGCGTCATAAAGTCACACTACATTGCACAGGACTGAGAAGAGTTTAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGCTACTACACATAAAATaGTGCACTACTTTCCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLLLHIK*CTTFPT Trigger: TGTGGGGAAAGTAGTGCACAATTTTATGTGTAGTAG...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCAAGTGCTGGGACTAATGGTATATGTCACCACACCCAGCTCATTTTATCATTTCATATGAGCTATTaGTGGGAGATGTTTGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: APSAGTNGICHHTQLILSFHMSY*WEMFVI Trigger: GATCACAAACATCTCCCACAAATAGCTCATATGAAA...TGATAAAATGAGCTGGGTGTGGTGACATATACCATTAGTCCCAGCACTTGGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| 3UTR GCA 72 bp | GCATGCACATGTAATCTTAACAGAAAGCATGAAAGATaGAAACTGGGCCATCTGAAGGTCACAGAACTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: ACTCNLNRKHER*KLGHLKVTELD Trigger: ATCCAGTTCTGTGACCTTCAGATGGCCCAGTTTGCATCTTTCATGCTTTCTGTTAAGATTACATGTGCATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTATCACTCATATACTGAAGGTCCTTTGCTAGGCGACAAGGAACCTGACCTAAAACTGAAACTGCTTTaGGTTCTGCCTTTCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: HYHSYTEGPLLGDKEPDLKLKLL*VLPFRS Trigger: TGATCTGAAAGGCAGAACCAAAAGCAGTTTCAGTTT...TAGGTCAGGTTCCTTGTCGCCTAGCAAAGGACCTTCAGTATATGAGTGATAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| 3UTR TCA 72 bp | GGATTCACTCCCAAATTCTTCTGGCTAATGTGCTGGTaGAACCCTCTGTTGAAGCTGAAATGTGATTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GFTPKFFWLMCW*NPLLKLKCDFF Trigger: AAAGAAATCACATTTCAGCTTCAACAGAGGGTTTCACCAGCACATTAGCCAGAAGAATTTGGGAGTGAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR TCA 72 bp | AAAAGAAGGTTGCAGTATGTGTGTGCACCTGACATGTaGCAGTCTGTCTGTAACCTTAATACCATCTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KRRLQYVCAPDM*QSVCNLNTIFQ Trigger: TTGGAAGATGGTATTAAGGTTACAGACAGACTGTCACATGTCAGGTGCACACACATACTGCAACCTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| 3UTR TCA 72 bp | TGCTCTTTAGGTCACAGGGTTTCGCACTCACATATGTaGATTAAAACTGAAACTGCTTTTGGTTCTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CSLGHRVSHSHM*IKTETAFGSAF Trigger: AAAGGCAGAACCAAAAGCAGTTTCAGTTTTAATTCACATATGTGAGTGCGAAACCCTGTGACCTAAAGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| 3UTR TCA 72 bp | TCATCCTCTCCAGTAGTAGTAGTTAGATGTAACTGCTaGACCACCTCTCTAGCCTCCTTTAAAGACATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SSSPVVVVRCNC*TTSLASFKDIF Trigger: AAAAATGTCTTTAAAGGAGGCTAGAGAGGTGGTTCAGCAGTTACATCTAACTACTACTACTGGAGAGGATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| 3UTR CCA 72 bp | CATCTGAAGGTCACAGAACTGGATTTAGTATATCAGTaGGCCAACAGCCACTATTTCCACAATAGTAACTAT | + |
|
Preference number: 3 (lower is better) Translates to: HLKVTELDLVYQ*ANSHYFHNSNY Trigger: ATAGTTACTATTGTGGAAATAGTGGCTGTTGGCCCACTGATATACTAAATCCAGTTCTGTGACCTTCAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR TCA 72 bp | ATTTATGGATGCTTACCTAAAGAGAAATGGCTCTTCTaGAGGCAAATACATAATGAAGTGAGGTCAGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: IYGCLPKEKWLF*RQIHNEVRSVQ Trigger: CTGTACTGACCTCACTTCATTATGTATTTGCCTTCAGAAGAGCCATTTCTCTTTAGGTAAGCATCCATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR TCA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACAGCGAGGGTCTCGGATaGGCGCCTCCAGCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VANKSHHRERNKGEVPGNSEGLG*APPASS Trigger: AGAGGAAGCTGGAGGCGCTCATCCGAGACCCTCGCT...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTCAAGGCCTGGAGCTGTaGCCGCAGCTGTTCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HGLSKVGHKQQPSLGITVQGLEL*PQLFNV Trigger: GACATTGAACAGCTGCGGTCACAGCTCCAGGCCTTG...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGTCAGTACAGCCATAGCTGGCCTCCCACCGTATCACCACTTCAATTCCAGGCTCAGCATCGCCTaGTCCACTGCCTATACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEVSTAIAGLPPYHHFNSRLSIA*STAYTG Trigger: TCCAGTATAGGCAGTGGACCAGGCGATGCTGAGCCT...GGAATTGAAGTGGTGATACGGTGGGAGGCCAGCTATGGCTGTACTGACCTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR GCA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTCATCGCCTGGTCCACTaGCTATACTGGAACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGLSKVGHKQQPSLGITVHRLVH*LYWNCP Trigger: TGGACAGTTCCAGTATAGGCAGTGGACCAGGCGATG...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGTCAGTACAGCCATAGCTGGCCTCCCACCGTATCACCACTTCAATTCCCATCGCCTGGTCCACTaGCTATACTGGAACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEVSTAIAGLPPYHHFNSHRLVH*LYWNCP Trigger: TGGACAGTTCCAGTATAGGCAGTGGACCAGGCGATG...GGAATTGAAGTGGTGATACGGTGGGAGGCCAGCTATGGCTGTACTGACCTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR GCA 90 bp | GCCATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGGGAGGCTTAAACATGTaGCACAGCGGCTTCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: AMASQRLATNSSLPLGSQGGLNM*HSGFIH Trigger: ATGTATGAAGCCGCTGTGGCACATGTTTAAGCCTCC...CTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR CAA 72 bp | GTAGCCCTGCTTGGCCTGGAGCTCACTATACATACCTaGAACTTACAGAGATCTGCCTGCCTCTGCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VALLGLELTIHT*NLQRSACLCLS Trigger: TGAGAGGCAGAGGCAGGCAGATCTCTGTAAGTTCAAGGTATGTATAGTGAGCTCCAGGCCAAGCAGGGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTATGCAGTTCCTTCATCTaGCCATCTGCATCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GPREQHSALSHSACQSALCSSFI*PSASCR Trigger: GCGGCAGGATGCAGATGGGCAGATGAAGGAACTGCA...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | GCCATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGCTAGCCGTGCTTTTGTaGTCTTGTGTTCAGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AMASQRLATNSSLPLGSQLAVLL*SCVQLL Trigger: AAGAAGCTGAACACAAGACCACAAAAGCACGGCTAG...CTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | TGCATGTACACTAAAGCTGAAATGTGCTGCTCTTTAGGTCACAGGGTTTCGCACGAGCAAGCTGTCGACTaGGCCGCCGAATGGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CMYTKAEMCCSLGHRVSHEQAVD*AAEWTG Trigger: ACCAGTCCATTCGGCGGCCCAGTCGACAGCTTGCTC...GTGCGAAACCCTGTGACCTAAAGAGCAGCACATTTCAGCTTTAGTGTACATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR TCA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACTGTCTATGTCACTGCTaGGCTCAGGTACCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VANKSHHRERNKGEVPGNCLCHC*AQVPLE Trigger: CTCCAGTGGTACCTGAGCTCAGCAGTGACATAGACA...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTATCAGTGAGCTTCTCCTaGAGCTGTCTCTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPREQHSALSHSACQSALSVSFS*SCLFSS Trigger: GCTGGAGAAGAGACAGCTGCAGGAGAAGCTCACTGA...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | GCCATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTGTGTATTAAGCCCATaGAGTGTATTGCATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AMASQRLATNSSLPLGSQCVLSP*SVLHPV Trigger: CACTGGATGCAATACACTCCATGGGCTTAATACACA...CTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTTCCCACTGGTTCCACTaGAAACTCTGGTTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HGLSKVGHKQQPSLGITVSHWFH*KLWFLL Trigger: AAGAAGGAACCAGAGTTTCCAGTGGAACCAGTGGGA...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | GCCATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGAAAAGGGTCTGGAGCTaGAGGCTTTTTAGGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: AMASQRLATNSSLPLGSQKRVWS*RLFRYL Trigger: AAGATACCTAAAAAGCCTCCAGCTCCAGACCCTTTT...CTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACTCGGGCAAAAGGGTCTaGAGCTGGAGGCTTTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VANKSHHRERNKGEVPGNSGKRV*SWRLFR Trigger: CCTAAAAAGCCTCCAGCTCCAGACCCTTTTGCCCGA...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR CAA 72 bp | CCTAACAGACTGACAGCAGCAGTATGCCATCTTCAGTaGGTTTGGCAGCCTCGAGCATGTCTCACTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PNRLTAAVCHLQ*VWQPRACLTRI Trigger: GATCCTAGTGAGACATGCTCGAGGCTGCCAAACCAACTGAAGATGGCATACTGCTGCTGTCAGTCTGTTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR CAA 72 bp | TCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTaGTCAAAGTGCTTTAACATTGGCTGTGGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQGTTLSTVTQC*SKCFNIGCGTS Trigger: GGAGGTGCCACAGCCAATGTTAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | GATGCAGTCAGCATCGCTGTAGTGGGATTCACTCCCAAATTCTTCTGGCTAATGAAGGCACAGAAGAGCTaGACTACCCAGGGACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DAVSIAVVGFTPKFFWLMKAQKS*TTQGLL Trigger: CAACAGTCCCTGGGTAGTTCAGCTCTTCTGTGCCTT...CATTAGCCAGAAGAATTTGGGAGTGAATCCCACTACAGCGATGCTGACTGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTGTTTCTGGAGCTGATTaGCCTTCTCAGTGGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: HGLSKVGHKQQPSLGITVVSGAD*PSQWIS Trigger: AGATATCCACTGAGAAGGTCAATCAGCTCCAGAAAC...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | GCCATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTAGATTCCAGCTGCTaGATCTGTTTGGAACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AMASQRLATNSSLPLGSQLDSSC*ICLELS Trigger: AGAAAGTTCCAAACAGATTCAGCAGCTGGAATCTAA...CTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACACTGCTGTGTCGCAATaGACCATGCCTGTTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VANKSHHRERNKGEVPGNTAVSQ*TMPVSS Trigger: GGATGAAACAGGCATGGTGCATTGCGACACAGCAGT...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTTGCCTCACAGTTGGTTaGGAAGTGATAAAGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGLSKVGHKQQPSLGITVCLTVG*EVIKSR Trigger: CCTACTCTTTATCACTTCCCAACCAACTGTGAGGCA...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTATTAGCTTGGCTTGTTTaGAGCAAGCTGTCGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPREQHSALSHSACQSALLAWLV*SKLSTG Trigger: CCCAGTCGACAGCTTGCTCCAAACAAGCCAAGCTAA...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | GCCATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTGCTAGTAAGGCTTTaGCAGTCTTCAAATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AMASQRLATNSSLPLGSQLLVRL*QSSNLL Trigger: AAGAAGATTTGAAGACTGGCAAAGCCTTACTAGCAA...CTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | TGCATGTACACTAAAGCTGAAATGTGCTGCTCTTTAGGTCACAGGGTTTCGCACTCGGGCAAAAGGGTCTaGAGCTGGAGGCTTTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CMYTKAEMCCSLGHRVSHSGKRV*SWRLFR Trigger: CCTAAAAAGCCTCCAGCTCCAGACCCTTTTGCCCGA...GTGCGAAACCCTGTGACCTAAAGAGCAGCACATTTCAGCTTTAGTGTACATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR CCA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTGGCCGCCGAATGGACTaGTTTTGTTGTATTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: HGLSKVGHKQQPSLGITVGRRMD*FCCIFI Trigger: AATGAAAATACAACAAAACCAGTCCATTCGGCGGCC...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGTCAGTACAGCCATAGCTGGCCTCCCACCGTATCACCACTTCAATTCCGGCCGCCGAATGGACTaGTTTTGTTGTATTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SEVSTAIAGLPPYHHFNSGRRMD*FCCIFI Trigger: AATGAAAATACAACAAAACCAGTCCATTCGGCGGCC...GGAATTGAAGTGGTGATACGGTGGGAGGCCAGCTATGGCTGTACTGACCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGCTCACTATACATACCTTGAACTTACAGAGATCTGCCTGCCTCTGCCTCGACTGGGCCGCCGAATaGACTGGTTTTGTTGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: LELTIHTLNLQRSACLCLDWAAE*TGFVVF Trigger: AAATACAACAAAACCAGTCCATTCGGCGGCCCAGTC...GAGGCAGAGGCAGGCAGATCTCTGTAAGTTCAAGGTATGTATAGTGAGCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCAAGTGCTGGGACTAATGGTATATGTCACCACACCCAGCTCATTTTATCATTACCTTGGCTTGTTTaGAGCAAGCTGTCGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: APSAGTNGICHHTQLILSLPWLV*SKLSTG Trigger: CCCAGTCGACAGCTTGCTCCAAACAAGCCAAGGTAA...TGATAAAATGAGCTGGGTGTGGTGACATATACCATTAGTCCCAGCACTTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR TCA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTATCATTTAGCTTCTGCTaGGACTGTTTGAGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GPREQHSALSHSACQSALSFSFC*DCLRSQ Trigger: CTGTGACCTCAAACAGTCTCAGCAGAAGCTAAATGA...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGGCCCATGGAGTGTATTaGATCCAGTGCAAGCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLAHGVY*IQCKHY Trigger: GTAGTGCTTGCACTGGATGCAATACACTCCATGGGC...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCAAGTGCTGGGACTAATGGTATATGTCACCACACCCAGCTCATTTTATCAGGAGGCTTAAACATGTaGCACAGCGGCTTCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: APSAGTNGICHHTQLILSGGLNM*HSGFIH Trigger: ATGTATGAAGCCGCTGTGGCACATGTTTAAGCCTCC...TGATAAAATGAGCTGGGTGTGGTGACATATACCATTAGTCCCAGCACTTGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTAAGGGTGTTAACTTGTTaGGTCTGCATCTTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPREQHSALSHSACQSALRVLTC*VCIFRS Trigger: TGACCTGAAGATGCAGACCCAACAAGTTAACACCCT...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | GATGCAGTCAGCATCGCTGTAGTGGGATTCACTCCCAAATTCTTCTGGCTAATGGACTGGGCCGCCGAATaGACTGGTTTTGTTGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: DAVSIAVVGFTPKFFWLMDWAAE*TGFVVF Trigger: AAATACAACAAAACCAGTCCATTCGGCGGCCCAGTC...CATTAGCCAGAAGAATTTGGGAGTGAATCCCACTACAGCGATGCTGACTGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | GCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACATCTGCAGACTCTCCACGTTaGTGGGCGAGCGAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATISTIVTIARIKVFTTSADSPR*WASEGL Trigger: GAGACCCTCGCTCGCCCATCAACGTGGAGAGTCTGC...AGATGTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACTGCATAAACCTTCTGTaGTGCCTTATGACGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: VANKSHHRERNKGEVPGNCINLL*CLMTNQ Trigger: TTGGTTCGTCATAAGGCATCACAGAAGGTTTATGCA...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTACAGCTGCTCAGAATCTaGTTTGGTAAGGGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPREQHSALSHSACQSALQLLRI*FGKGNF Trigger: GAAATTACCCTTACCAAAGCAGATTCTGAGCAGCTG...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTATTCCACTGGAAACTCTaGTTCCTTCTTACTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPREQHSALSHSACQSALFHWKL*FLLTFS Trigger: GGAGAAAGTAAGAAGGAACCAGAGTTTCCAGTGGAA...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS-3UTR CCA 90 bp | TGCATGTACACTAAAGCTGAAATGTGCTGCTCTTTAGGTCACAGGGTTTCGCACTCCCACTGGTTCCACTaGAAACTCTGGTTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CMYTKAEMCCSLGHRVSHSHWFH*KLWFLL Trigger: AAGAAGGAACCAGAGTTTCCAGTGGAACCAGTGGGA...GTGCGAAACCCTGTGACCTAAAGAGCAGCACATTTCAGCTTTAGTGTACATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACTACATGCCTCACAGTTaGTTGGGAAGTGATAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VANKSHHRERNKGEVPGNYMPHS*LGSDKE Trigger: CTCTTTATCACTTCCCAACCAACTGTGAGGCATGTA...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR CAA 72 bp | AGCTATGTAAGTCCAAATAAGGGTGTTGGATCCACCTaGGGCCTGAGGTTACAGGTAATTGTGAGCCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: SYVSPNKGVGST*GLRLQVIVSHL Trigger: TAGGTGGCTCACAATTACCTGTAACCTCAGGCCCAAGGTGGATCCAACACCCTTATTTGGACTTACATAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR GCA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGCAATGTCGTCAAAGTTaGTGCTGTCTATGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLQCRQS*CCLCHC Trigger: GCAGTGACATAGACAGCAGCAACTTTGACGACATTG...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACTCATCCTGTAAATCCTaGTTCTTCTGTTGCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VANKSHHRERNKGEVPGNSSCKS*FFCCNS Trigger: AGAGTTGCAACAGAAGAAGCAGGATTTACAGGATGA...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS-3UTR CCA 90 bp | GATGCAGTCAGCATCGCTGTAGTGGGATTCACTCCCAAATTCTTCTGGCTAATGCAGCAGTGTAAAACTTaGCCCACTTTTCAGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: DAVSIAVVGFTPKFFWLMQQCKT*PTFQVH Trigger: ATGTACCTGAAAAGTGGGCCAAGTTTTACACTGCTG...CATTAGCCAGAAGAATTTGGGAGTGAATCCCACTACAGCGATGCTGACTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTATATCAGTGGGCCAACAGCCACTATTTCCACAATAGTAACTATAGCGAGGAGCTCAGGTACCACTaGAGCTGCCGTCTCTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LVYQWANSHYFHNSNYSEELRYH*SCRLSY Trigger: ATAAGAGAGACGGCAGCTCCAGTGGTACCTGAGCTC...CTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTTGGCCCACTGATATACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS-3UTR CCA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGGCTGCTGAATCTGTTTaGAACTTTCTGCCTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLAAESV*NFLPGF Trigger: AAACCCAGGCAGAAAGTTCCAAACAGATTCAGCAGC...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTAACACCATGTAAGGGTTaGACTGCTCTTTATCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPREQHSALSHSACQSALTPCKG*TALYLV Trigger: AACAAGATAAAGAGCAGTCCAACCCTTACATGGTGT...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS-3UTR CCA 90 bp | CATGTTGAGTACAGCTATGTAAGTCCAAATAAGGGTGTTGGATCCACCTTGGGCTGCCTCACAGTTGGTTaGGAAGTGATAAAGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HVEYSYVSPNKGVGSTLGCLTVG*EVIKSR Trigger: CCTACTCTTTATCACTTCCCAACCAACTGTGAGGCA...GCCCAAGGTGGATCCAACACCCTTATTTGGACTTACATAGCTGTACTCAACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGTGCTGGGACTAATGGTATATGTCACCACACCCAGCTCATTTTATCATACATGCCTCACAGTTaGTTGGGAAGTGATAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: APSAGTNGICHHTQLILSYMPHS*LGSDKE Trigger: CTCTTTATCACTTCCCAACCAACTGTGAGGCATGTA...TGATAAAATGAGCTGGGTGTGGTGACATATACCATTAGTCCCAGCACTTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR CCA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACGAGCAAGCTGTCGACTaGGCCGCCGAATGGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNEQAVD*AAEWTG Trigger: ACCAGTCCATTCGGCGGCCCAGTCGACAGCTTGCTC...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGCTCTCTTCAGCTATTTaGGCCTGCATTTCATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLLSSAI*ACISFS Trigger: ACTGAATGAAATGCAGGCTCAAATAGCTGAAGAGAG...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS-3UTR CCA 90 bp | TGCATGTACACTAAAGCTGAAATGTGCTGCTCTTTAGGTCACAGGGTTTCGCACGTCCACTGCCTATACTaGAACTGTCCATACCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: CMYTKAEMCCSLGHRVSHVHCLY*NCPYQY Trigger: ATATTGGTATGGACAGTTCCAGTATAGGCAGTGGAC...GTGCGAAACCCTGTGACCTAAAGAGCAGCACATTTCAGCTTTAGTGTACATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGTGCTGGGACTAATGGTATATGTCACCACACCCAGCTCATTTTATCAACACCATGTAAGGGTTaGACTGCTCTTTATCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: APSAGTNGICHHTQLILSTPCKG*TALYLV Trigger: AACAAGATAAAGAGCAGTCCAACCCTTACATGGTGT...TGATAAAATGAGCTGGGTGTGGTGACATATACCATTAGTCCCAGCACTTGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR CCA 90 bp | TGCATGTACACTAAAGCTGAAATGTGCTGCTCTTTAGGTCACAGGGTTTCGCACTTCCACTGGAAACTCTaGTTCCTTCTTACTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CMYTKAEMCCSLGHRVSHFHWKL*FLLTFS Trigger: GGAGAAAGTAAGAAGGAACCAGAGTTTCCAGTGGAA...GTGCGAAACCCTGTGACCTAAAGAGCAGCACATTTCAGCTTTAGTGTACATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
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| 3UTR CAA 72 bp | GTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTaGTGCTGGTACACATTTATCTTGAAGGATTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFTALGDQRKQY*CWYTFILKDWR Trigger: CCTCCAATCCTTCAAGATAAATGTGTACCAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGTGTTTTATAGAGGGTTaGGAAATACTGCTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLCFIEG*EILLCF Trigger: GAAGCAGAGCAGTATTTCTCAACCCTCTATAAAACA...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS-3UTR GCA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACTCCTGCTTCTTCTGTTaGAACTCTTTACAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VANKSHHRERNKGEVPGNSCFFC*NSLQSF Trigger: AAAACTTTGTAAAGAGTTGCAACAGAAGAAGCAGGA...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | GATGCAGTCAGCATCGCTGTAGTGGGATTCACTCCCAAATTCTTCTGGCTAATGCTTCATCTTTCAACTTaGACAGTTGTTCTTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: DAVSIAVVGFTPKFFWLMLHLST*TVVLGY Trigger: ATAGCCAAGAACAACTGTCCAAGTTGAAAGATGAAG...CATTAGCCAGAAGAATTTGGGAGTGAATCCCACTACAGCGATGCTGACTGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | GCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACATCTCCAATATGCAAGGCCTaGAGCTGTGACCGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATISTIVTIARIKVFTTSPICKA*SCDRSC Trigger: ACAGCTGCGGTCACAGCTCCAGGCCTTGCATATTGG...AGATGTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACAGGCTCAGCATCGCCTaGTCCACTGCCTATACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNRLSIA*STAYTG Trigger: TCCAGTATAGGCAGTGGACCAGGCGATGCTGAGCCT...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | GCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACATCTACCATCACCTCCTTGTaGTTTCAGAACCTCGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ATISTIVTIARIKVFTTSTITSL*FQNLGR Trigger: TCGCCCGAGGTTCTGAAATCACAAGGAGGTGATGGT...AGATGTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | TTAGTATATCAGTGGGCCAACAGCCACTATTTCCACAATAGTAACTATAGCGAGATCATTAATTATCTCTaGTCCATGGGTCCGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVYQWANSHYFHNSNYSEIINYL*SMGPVP Trigger: AGGGACCGGACCCATGGATCAGAGATAATTAATGAT...CTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTTGGCCCACTGATATACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | GCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACATCTCCTTCTCTAAGTCAGTaGGCTTCTCCTGCAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ATISTIVTIARIKVFTTSPSLSQ*ASPAAV Trigger: GACAGCTGCAGGAGAAGCTCACTGACTTAGAGAAGG...AGATGTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | TTAGTATATCAGTGGGCCAACAGCCACTATTTCCACAATAGTAACTATAGCGAGTGTCACTACCACGCTTaGCAGGTTCTTTTCGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVYQWANSHYFHNSNYSECHYHA*QVLFDS Trigger: TGAATCGAAAAGAACCTGTCAAGCGTGGTAGTGACA...CTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTTGGCCCACTGATATACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGACTTAGGCTTCATCTCCACATCACATTACCATTTTCTACTGGCACATCTAAAAGGGTCTGGAGCTaGAGGCTTTTTAGGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGLRLHLHITLPFSTGTSKRVWS*RLFRYL Trigger: AAGATACCTAAAAAGCCTCCAGCTCCAGACCCTTTT...AGATGTGCCAGTAGAAAATGGTAATGTGATGTGGAGATGAAGCCTAAGTCCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR TCA 90 bp | TTAGTATATCAGTGGGCCAACAGCCACTATTTCCACAATAGTAACTATAGCGAGTCACAGCTTGAGTCTTaGGAGTTCTCTCATTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVYQWANSHYFHNSNYSESQLES*EFSHSE Trigger: TTCTGAATGAGAGAACTCTCAAGACTCAAGCTGTGA...CTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTTGGCCCACTGATATACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTATATCAGTGGGCCAACAGCCACTATTTCCACAATAGTAACTATAGCGAGTTCAGCACATCTTTCTaGTTCAGCAGCTCATTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVYQWANSHYFHNSNYSEFSTSF*FSSSFS Trigger: GCTAAATGAGCTGCTGAAGCAGAAAGATGTGCTGAA...CTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTTGGCCCACTGATATACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTATATCAGTGGGCCAACAGCCACTATTTCCACAATAGTAACTATAGCGAGGTCCACTGCCTATACTaGAACTGTCCATACCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LVYQWANSHYFHNSNYSEVHCLY*NCPYQY Trigger: ATATTGGTATGGACAGTTCCAGTATAGGCAGTGGAC...CTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTTGGCCCACTGATATACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | TTAGTATATCAGTGGGCCAACAGCCACTATTTCCACAATAGTAACTATAGCGAGGTTCTTTTCGATTCATaGTCTCCGCCAACTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVYQWANSHYFHNSNYSEVLFDS*SPPTYS Trigger: TGAATAAGTTGGCGGAGATCATGAATCGAAAAGAAC...CTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTTGGCCCACTGATATACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACAGGTACCACTGGAGCTaGCGTCTCTCTTATGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNRYHWS*RLSYVI Trigger: GATAACATAAGAGAGACGGCAGCTCCAGTGGTACCT...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | GCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACATCTATGGAACGAGCCAGCTaGTCAGAATCTGCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ATISTIVTIARIKVFTTSMERAS*SESALV Trigger: TACCAAAGCAGATTCTGAGCAGCTGGCTCGTTCCAT...AGATGTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACGTAGGTTCCTACAAGTaGATCTGCGTAAAATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNVGSYK*ICVKWS Trigger: ACTCCATTTTACGCAGATTCACTTGTAGGAACCTAC...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACAGGGTTGAGAAATACTaGTCTGCTTCAAGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNRVEKY*SASSWS Trigger: AGACCAACTTGAAGCAGAGCAGTATTTCTCAACCCT...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACCTGTGCTTTAATAGCTaGTGCACTCATCTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNLCFNS*CTHLFI Trigger: GATGAAGAGATGAGTGCAGCAGCTATTAAAGCACAG...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACCTGCTTCTCAAACTGTaGTTTAATAGCTGCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNLLLKL*FNSCCT Trigger: AGTGCAGCAGCTATTAAAGCACAGTTTGAGAAGCAG...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | GCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACATCTAACTTATTCACAGCTTaGGTCTTGAGAGTTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ATISTIVTIARIKVFTTSNLFTA*VLRVLS Trigger: TGAGAGAACTCTCAAGACTCAAGCTGTGAATAAGTT...AGATGTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR GCA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACTTAACTTGTTGGGTCTaGATCTTCAGGTCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNLTCWV*IFRSFC Trigger: GCAAAATGACCTGAAGATGCAGACCCAACAAGTTAA...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR TCA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACTTCTTTCATGGCTTCTaGTTTAGCTTCTTCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNFFHGF*FSFFNG Trigger: TCCATTGAAGAAGCTAAATCAGAAGCCATGAAAGAA...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| 3UTR CAA 72 bp | TTCACTAAAATATCAGGCAAACATTTCAATGTCATATaGAACTTTGCATATGTACAGAGCCTGATGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTKISGKHFNVI*NFAYVQSLMLL Trigger: GAGCAGCATCAGGCTCTGTACATATGCAAAGTTCAATATGACATTGAAATGTTTGCCTGATATTTTAGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS GCA 90 bp | GCATCGCCTGGTCCACTGCCTATACTGGAACTGTCCATACCAATATaGAAGGCCTGGAGCTGTGACCGCAGCTGTTCAATGTCGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASPGPLPILELSIPI*KAWSCDRSCSMSLS Trigger: AGACAGCGACATTGAACAGCTGCGGTCACAGCTCCAGGCCTTGCATATTGGTATGGACAGTTCCAGTATAGGCAGTGGACCAGGCGATGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS CCA 90 bp | GAAATCCATCATCAGGCTCAGCATCGCCTGGTCCACTGCCTATACTaGAACTGTCCATACCAATATGCAAGGCCTGGAGCTGTGACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: EIHHQAQHRLVHCLY*NCPYQYARPGAVTA Trigger: TGCGGTCACAGCTCCAGGCCTTGCATATTGGTATGGACAGTTCCAGTATAGGCAGTGGACCAGGCGATGCTGAGCCTGATGATGGATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS CCA 90 bp | GGTCCACTGCCTATACTGGAACTGTCCATACCAATATGCAAGGCCTaGAGCTGTGACCGCAGCTGTTCAATGTCGCTGTCTTTACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPLPILELSIPICKA*SCDRSCSMSLSLLS Trigger: GGACAGTAAAGACAGCGACATTGAACAGCTGCGGTCACAGCTCCAGGCCTTGCATATTGGTATGGACAGTTCCAGTATAGGCAGTGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS-3UTR CAA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGAGCAGACTCTCCACGTaGATGGGCGAGCGAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLSRLST*MGERGS Trigger: AGACCCTCGCTCGCCCATCAACGTGGAGAGTCTGCT...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS TCA 90 bp | GCCTATACTGGAACTGTCCATACCAATATGCAAGGCCTGGAGCTGTaGCCGCAGCTGTTCAATGTCGCTGTCTTTACTGTCCAGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AYTGTVHTNMQGLEL*PQLFNVAVFTVQGH Trigger: ATGACCCTGGACAGTAAAGACAGCGACATTGAACAGCTGCGGTCACAGCTCCAGGCCTTGCATATTGGTATGGACAGTTCCAGTATAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS GCA 90 bp | TATGGACTGGAAATCCATCATCAGGCTCAGCATCGCCTGGTCCACTaGCTATACTGGAACTGTCCATACCAATATGCAAGGCCTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YGLEIHHQAQHRLVH*LYWNCPYQYARPGA Trigger: AGCTCCAGGCCTTGCATATTGGTATGGACAGTTCCAGTATAGGCAGTGGACCAGGCGATGCTGAGCCTGATGATGGATTTCCAGTCCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220688.2 |
||
| CDS-3UTR CAA 90 bp | GCCATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGCCAGCTGTCTTAATGTaGATTCCACACTTTTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: AMASQRLATNSSLPLGSQPAVLM*IPHFSV Trigger: TACGGAAAAGTGTGGAATCAACATTAAGACAGCTGG...CTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTGTGTCACTACCACGCTaGACAGGTTCTTTTCGATTC | + |
|
Preference number: 5 (lower is better) Translates to: HGLSKVGHKQQPSLGITVVSLPR*TGSFRF Trigger: GAATCGAAAAGAACCTGTCAAGCGTGGTAGTGACAC...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS TCA 90 bp | TGTCATCCTCAATGTCGTCAAAGTTGCTGCTGTCTATGTCACTGCTaGGCTCAGGTACCACTGGAGCTGCCGTCTCTCTTATGTTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: CHPQCRQSCCCLCHC*AQVPLELPSLLCYP Trigger: GGGATAACATAAGAGAGACGGCAGCTCCAGTGGTACCTGAGCTCAGCAGTGACATAGACAGCAGCAACTTTGACGACATTGAGGATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS GCA 90 bp | TTGATTCTGGAAATCCATCATCAGGCTCAGCATCGCCTGGTCCACTaGCTATACTGGAACTGTCCATACCAATATGCAAGGCCTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LILEIHHQAQHRLVH*LYWNCPYQYARPGA Trigger: AGCTCCAGGCCTTGCATATTGGTATGGACAGTTCCAGTATAGGCAGTGGACCAGGCGATGCTGAGCCTGATGATGGATTTCCAGAATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTAAGCCCATGGAGTGTATaGCATCCAGTGCAAGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: GPREQHSALSHSACQSALSPWSV*HPVQAL Trigger: TAGTGCTTGCACTGGATGCAATACACTCCATGGGCT...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTTGCTCAGAATCTGCTTaGGTAAGGGTAATTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HGLSKVGHKQQPSLGITVCSESA*VRVISS Trigger: GCTGGAAATTACCCTTACCAAAGCAGATTCTGAGCA...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | GATGCAGTCAGCATCGCTGTAGTGGGATTCACTCCCAAATTCTTCTGGCTAATGCAGGTACCTGTCATCTaGAAAGGCACAGAAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DAVSIAVVGFTPKFFWLMQVPVI*KGTEEL Trigger: CAGCTCTTCTGTGCCTTTCAAGATGACAGGTACCTG...CATTAGCCAGAAGAATTTGGGAGTGAATCCCACTACAGCGATGCTGACTGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS GCA 90 bp | AGAGTATTGTTCTTCAGCAATGGAACGAGCCAGCTGCTCAGAATCTaGTTTGGTAAGGGTAATTTCCAGCTGGGCAGCCAAAGAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RVLFFSNGTSQLLRI*FGKGNFQLGSQRVS Trigger: AGAGACTCTTTGGCTGCCCAGCTGGAAATTACCCTTACCAAAGCAGATTCTGAGCAGCTGGCTCGTTCCATTGCTGAAGAACAATACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS-3UTR CAA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTGTGTTTTATAGAGGGTaGAGAAATACTGCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HGLSKVGHKQQPSLGITVVFYRG*RNTALL Trigger: AAGCAGAGCAGTATTTCTCAACCCTCTATAAAACAC...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS GCA 90 bp | GAGAAATACTGCTCTGCTTCAAGTTGGTCTTGCAGTTCCTTCATCTaGCCATCTGCATCCTGCCGCTCTTTTCGAAGTTCAGTATTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EKYCSASSWSCSSFI*PSASCRSFRSSVFC Trigger: GCAAAATACTGAACTTCGAAAAGAGCGGCAGGATGCAGATGGGCAGATGAAGGAACTGCAAGACCAACTTGAAGCAGAGCAGTATTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS GCA 90 bp | TTTTCCAAATCAGAGTATTGTTCTTCAGCAATGGAACGAGCCAGCTaGTCAGAATCTGCTTTGGTAAGGGTAATTTCCAGCTGGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSKSEYCSSAMERAS*SESALVRVISSWAA Trigger: GGCTGCCCAGCTGGAAATTACCCTTACCAAAGCAGATTCTGAGCAGCTGGCTCGTTCCATTGCTGAAGAACAATACTCTGATTTGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS-3UTR CAA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGACTACCCAGGGACTGTaGGCAAAGGCCATAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLTTQGL*AKAIIS Trigger: AGATATTATGGCCTTTGCCAACAGTCCCTGGGTAGT...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | CATGGCCTCTCAAAGGTTGGCCACAAACAGCAGCCTTCCCTTGGGATCACAGTTCTTTTCAGTAAGTTCTaGTTTGTGTCTAGCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: HGLSKVGHKQQPSLGITVLFSKF*FVSSHH Trigger: ATGATGGCTAGACACAAACAAGAACTTACTGAAAAG...AACTGTGATCCCAAGGGAAGGCTGCTGTTTGTGGCCAACCTTTGAGAGGCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | GATGCAGTCAGCATCGCTGTAGTGGGATTCACTCCCAAATTCTTCTGGCTAATGGCTCTCTTCAGCTATTaGAGCCTGCATTTCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DAVSIAVVGFTPKFFWLMALFSY*SLHFIQ Trigger: CTGAATGAAATGCAGGCTCAAATAGCTGAAGAGAGC...CATTAGCCAGAAGAATTTGGGAGTGAATCCCACTACAGCGATGCTGACTGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGTCAATGTCGTCAAAGTaGCTGCTGTCTATGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLSMSSK*LLSMSL Trigger: CAGTGACATAGACAGCAGCAACTTTGACGACATTGA...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACTTTGCTAGTAAGGCTTaGCCAGTCTTCAAATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VANKSHHRERNKGEVPGNFASKA*PVFKSS Trigger: AGAAGATTTGAAGACTGGCAAAGCCTTACTAGCAAA...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTATTTCAACTTGGACAGTaGTTCTTGGCTATCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPREQHSALSHSACQSALFQLGQ*FLAIFQ Trigger: CTGAAAGATAGCCAAGAACAACTGTCCAAGTTGAAA...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS TCA 90 bp | TCGTTCAGCACATCTTTCTGCTTCAGCAGCTCATTTAGCTTCTGCTaGGACTGTTTGAGGTCACAGTCCAATATAGAGCATCTTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SFSTSFCFSSSFSFC*DCLRSQSNIEHLFS Trigger: CGAGAAAAGATGCTCTATATTGGACTGTGACCTCAAACAGTCTCAGCAGAAGCTAAATGAGCTGCTGAAGCAGAAAGATGTGCTGAACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS GCA 90 bp | ATAGAGCATCTTTTCTCGGCTTCCAGGAGCAGGTTCTCCACTTTCTaGTTTAAAGACCTCTCTTCCAACAGCTTCTTCTCCATTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IEHLFSASRSRFSTF*FKDLSSNSFFSISF Trigger: GAAAGAAATGGAGAAGAAGCTGTTGGAAGAGAGGTCTTTAAAGCAGAAAGTGGAGAACCTGCTCCTGGAAGCCGAGAAAAGATGCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACCAGCTCCTCCTTGGCTaGCACCTCACTGCTAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNQLLLG*HLTAKV Trigger: CACCTTAGCAGTGAGGTGCAAGCCAAGGAGGAGCTG...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAGGGAACAACACTCAGCACTGTCACACAGTGCTTGTCAAAGTGCTTTAATCCTGCTTCTTCTGTaGCAACTCTTTACAAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GPREQHSALSHSACQSALILLLL*QLFTKF Trigger: AAACTTTGTAAAGAGTTGCAACAGAAGAAGCAGGAT...TAAAGCACTTTGACAAGCACTGTGTGACAGTGCTGAGTGTTGTTCCCTGGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGCCAAGTATTTACAGCTCTGGGGGACCAAAGGAAGCAGTATTTGTGCTGCAACTTATTCACAGCTaGAGTCTTGAGAGTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QMPSIYSSGGPKEAVFVLQLIHS*SLESSL Trigger: GAGAGAACTCTCAAGACTCAAGCTGTGAATAAGTTG...CAGCACAAATACTGCTTCCTTTGGTCCCCCAGAGCTGTAAATACTTGGCATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | GTTGCAAACAAAAGTCACCACAGGGAAAGGAACAAAGGTGAGGTCCCAGGGAACACCATCCTTCTAATCTaGATTCTGGAAATCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: VANKSHHRERNKGEVPGNTILLI*ILEIHH Trigger: ATGATGGATTTCCAGAATCAAGATTAGAAGGATGGT...GTTCCCTGGGACCTCACCTTTGTTCCTTTCCCTGTGGTGACTTTTGTTTGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS-3UTR CAA 90 bp | CATGTTGAGTACAGCTATGTAAGTCCAAATAAGGGTGTTGGATCCACCTTGGGCAACTTTTTAGTGTTGTaGCGCACAGGCAATGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: HVEYSYVSPNKGVGSTLGNFLVL*RTGNDN Trigger: GTTGTCATTGCCTGTGCGCAACAACACTAAAAAGTT...GCCCAAGGTGGATCCAACACCCTTATTTGGACTTACATAGCTGTACTCAACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGACTTAGGCTTCATCTCCACATCACATTACCATTTTCTACTGGCACATCTCCAAACTTTTTAGTGTaGTTGCGCACAGGCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: VGLRLHLHITLPFSTGTSPNFLV*LRTGND Trigger: GTCATTGCCTGTGCGCAACAACACTAAAAAGTTTGG...AGATGTGCCAGTAGAAAATGGTAATGTGATGTGGAGATGAAGCCTAAGTCCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS-3UTR CAA 90 bp | TGCATGTACACTAAAGCTGAAATGTGCTGCTCTTTAGGTCACAGGGTTTCGCACACCATCCTTCTAATCTaGATTCTGGAAATCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: CMYTKAEMCCSLGHRVSHTILLI*ILEIHH Trigger: ATGATGGATTTCCAGAATCAAGATTAGAAGGATGGT...GTGCGAAACCCTGTGACCTAAAGAGCAGCACATTTCAGCTTTAGTGTACATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221463.2 |
||
| CDS GCA 90 bp | AGTTCTCTCATTCAGAAGCTGCTTCTCAAACTGTGCTTTAATAGCTaGTGCACTCATCTCTTCATCTTTCAACTTGGACAGTTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLIQKLLLKLCFNS*CTHLFIFQLGQLFL Trigger: CAAGAACAACTGTCCAAGTTGAAAGATGAAGAGATGAGTGCAGCAGCTATTAAAGCACAGTTTGAGAAGCAGCTTCTGAATGAGAGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTATATCAGTGGGCCAACAGCCACTATTTCCACAATAGTAACTATAGCGAGTTTTCAAGTTTTAACTaGGCAGTCTCAAGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVYQWANSHYFHNSNYSEFSSFN*AVSSRQ Trigger: CTGCCTGCTTGAGACTGCCAAGTTAAAACTTGAAAA...CTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTTGGCCCACTGATATACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
||
| CDS TCA 90 bp | AGGCAGTTTTTATCTTGTAGATCTCTATTGTTAGATTCCAGCTGCTaGATCTGTTTGGAACTTTCTGCCTGGGTTTTTCTTAACCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RQFLSCRSLLLDSSC*ICLELSAWVFLNRA Trigger: AGCACGGTTAAGAAAAACCCAGGCAGAAAGTTCCAAACAGATTCAGCAGCTGGAATCTAACAATAGAGATCTACAAGATAAAAACTGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
||
| CDS TCA 90 bp | TCTGATCCATGGGTCCGGTCCCTTCTTTCAGATTCTAAAGCTGACTaGAGATTGATAAATTCCTTTTCAAGTTTTAACTTGGCAGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SDPWVRSLLSDSKAD*RLINSFSSFNLAVS Trigger: TGAGACTGCCAAGTTAAAACTTGAAAAGGAATTTATCAATCTTCAGTCAGCTTTAGAATCTGAAAGAAGGGACCGGACCCATGGATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS-3UTR CAA 90 bp | TTAGTATATCAGTGGGCCAACAGCCACTATTTCCACAATAGTAACTATAGCGAGTCAGTAAGTTCTTGTTaGTGTCTAGCCATCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: LVYQWANSHYFHNSNYSESVSSC*CLAIIS Trigger: AGAGATGATGGCTAGACACAAACAAGAACTTACTGA...CTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTTGGCCCACTGATATACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS-3UTR CAA 90 bp | GCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACATCTCGTGCTTTTGTGGTCTaGTGTTCAGCTTCTTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: ATISTIVTIARIKVFTTSRAFVV*CSASSC Trigger: ACAAGAAGAAGCTGAACACAAGACCACAAAAGCACG...AGATGTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS-3UTR CAA 90 bp | GCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACATCTCCAAACTTTTTAGTGTaGTTGCGCACAGGCAATGAC | + |
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Preference number: 5 (lower is better) Translates to: ATISTIVTIARIKVFTTSPNFLV*LRTGND Trigger: GTCATTGCCTGTGCGCAACAACACTAAAAAGTTTGG...AGATGTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS-3UTR CAA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACCATCTTCAGGTCATTTaGCATAAGACAACGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNHLQVI*HKTTLL Trigger: CAGAAGCGTTGTCTTATGCAAAATGACCTGAAGATG...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS-3UTR CAA 90 bp | GCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACATCTAACTTTTTAGTGTTGTaGCGCACAGGCAATGACAAC | + |
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Preference number: 5 (lower is better) Translates to: ATISTIVTIARIKVFTTSNFLVL*RTGNDN Trigger: GTTGTCATTGCCTGTGCGCAACAACACTAAAAAGTT...AGATGTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS-3UTR CAA 90 bp | AACAGCCACTATTTCCACAATAGTAACTATAGCGAGGATCAAAGTTTTTACAACTTCCAAATCAGAGTATaGTTCTTCAGCAATGGAACG | + |
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Preference number: 5 (lower is better) Translates to: NSHYFHNSNYSEDQSFYNFQIRV*FFSNGT Trigger: CGTTCCATTGCTGAAGAACAATACTCTGATTTGGAA...GTTGTAAAAACTTTGATCCTCGCTATAGTTACTATTGTGGAAATAGTGGCTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020904.8 |
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| CDS CAA 72 bp | ACCAAGGAATTTAAGCCATCCAGCAGACTCTCCACGTaGATGGGCGAGCGAGGGTCTCGGATGAGCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TKEFKPSSRLST*MGERGSRMSAS Trigger: GGAGGCGCTCATCCGAGACCCTCGCTCGCCCATCAACGTGGAGAGTCTGCTGGATGGCTTAAATTCCTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS GCA 72 bp | CAGAACCTCGGGCGATATGTAGTCGGGAGTTCCAACTaGTGTGTCGCAATGCACCATGCCTGTTTCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: QNLGRYVVGSSN*CVAMHHACFIH Trigger: ATGGATGAAACAGGCATGGTGCATTGCGACACAGCAGTTGGAACTCCCGACTACATATCGCCCGAGGTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS GCA 72 bp | GGTCCACTGCCTATACTGGAACTGTCCATACCAATATaGAAGGCCTGGAGCTGTGACCGCAGCTGTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: GPLPILELSIPI*KAWSCDRSCSM Trigger: CATTGAACAGCTGCGGTCACAGCTCCAGGCCTTGCATATTGGTATGGACAGTTCCAGTATAGGCAGTGGACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS GCA 72 bp | CTACGGCACTCTAGAGCAGGAGGAGGCTTAAACATGTaGCACAGCGGCTTCATACATGCCTCACAGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LRHSRAGGGLNM*HSGFIHASQLV Trigger: AACCAACTGTGAGGCATGTATGAAGCCGCTGTGGCACATGTTTAAGCCTCCTCCTGCTCTAGAGTGCCGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 ENSMUST00000221463.2 |
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| CDS CAA 90 bp | GGGAAGGTCTCTACATCGCCTTTGTCATCCTCAATGTCGTCAAAGTaGCTGCTGTCTATGTCACTGCTGAGCTCAGGTACCACTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: GKVSTSPLSSSMSSK*LLSMSLLSSGTTGA Trigger: AGCTCCAGTGGTACCTGAGCTCAGCAGTGACATAGACAGCAGCAACTTTGACGACATTGAGGATGACAAAGGCGATGTAGAGACCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS TCA 72 bp | GGAACTGTCCATACCAATATGCAAGGCCTGGAGCTGTaGCCGCAGCTGTTCAATGTCGCTGTCTTTACTGTC | + |
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Preference number: 6 (lower is better) Translates to: GTVHTNMQGLEL*PQLFNVAVFTV Trigger: GACAGTAAAGACAGCGACATTGAACAGCTGCGGTCACAGCTCCAGGCCTTGCATATTGGTATGGACAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CCA 72 bp | CCTATACTGGAACTGTCCATACCAATATGCAAGGCCTaGAGCTGTGACCGCAGCTGTTCAATGTCGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PILELSIPICKA*SCDRSCSMSLS Trigger: AGACAGCGACATTGAACAGCTGCGGTCACAGCTCCAGGCCTTGCATATTGGTATGGACAGTTCCAGTATAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 72 bp | TCAGCAATGGAACGAGCCAGCTGCTCAGAATCTGCTTaGGTAAGGGTAATTTCCAGCTGGGCAGCCAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SAMERASCSESA*VRVISSWAAKE Trigger: CTCTTTGGCTGCCCAGCTGGAAATTACCCTTACCAAAGCAGATTCTGAGCAGCTGGCTCGTTCCATTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS GCA 72 bp | TGCTCTGCTTCAAGTTGGTCTTGCAGTTCCTTCATCTaGCCATCTGCATCCTGCCGCTCTTTTCGAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSASSWSCSSFI*PSASCRSFRSS Trigger: TGAACTTCGAAAAGAGCGGCAGGATGCAGATGGGCAGATGAAGGAACTGCAAGACCAACTTGAAGCAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS GCA 72 bp | TTCTTCAGCAATGGAACGAGCCAGCTGCTCAGAATCTaGTTTGGTAAGGGTAATTTCCAGCTGGGCAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FFSNGTSQLLRI*FGKGNFQLGSQ Trigger: TTGGCTGCCCAGCTGGAAATTACCCTTACCAAAGCAGATTCTGAGCAGCTGGCTCGTTCCATTGCTGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS GCA 72 bp | GAAATCCATCATCAGGCTCAGCATCGCCTGGTCCACTaGCTATACTGGAACTGTCCATACCAATATGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: EIHHQAQHRLVH*LYWNCPYQYAR Trigger: CCTTGCATATTGGTATGGACAGTTCCAGTATAGGCAGTGGACCAGGCGATGCTGAGCCTGATGATGGATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CCA 72 bp | ATGGACTGGAAATCCATCATCAGGCTCAGCATCGCCTaGTCCACTGCCTATACTGGAACTGTCCATACCAAT | + |
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Preference number: 6 (lower is better) Translates to: MDWKSIIRLSIA*STAYTGTVHTN Trigger: ATTGGTATGGACAGTTCCAGTATAGGCAGTGGACCAGGCGATGCTGAGCCTGATGATGGATTTCCAGTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220688.2 |
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| CDS GCA 72 bp | CTTTTCTCGGCTTCCAGGAGCAGGTTCTCCACTTTCTaGTTTAAAGACCTCTCTTCCAACAGCTTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LFSASRSRFSTF*FKDLSSNSFFS Trigger: GGAGAAGAAGCTGTTGGAAGAGAGGTCTTTAAAGCAGAAAGTGGAGAACCTGCTCCTGGAAGCCGAGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 72 bp | TCTACATCGCCTTTGTCATCCTCAATGTCGTCAAAGTaGCTGCTGTCTATGTCACTGCTGAGCTCAGGTACC | + |
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Preference number: 6 (lower is better) Translates to: STSPLSSSMSSK*LLSMSLLSSGT Trigger: GGTACCTGAGCTCAGCAGTGACATAGACAGCAGCAACTTTGACGACATTGAGGATGACAAAGGCGATGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 90 bp | TATTGTTCTTCAGCAATGGAACGAGCCAGCTGCTCAGAATCTGCTTaGGTAAGGGTAATTTCCAGCTGGGCAGCCAAAGAGTCTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: YCSSAMERASCSESA*VRVISSWAAKESLS Trigger: TGAAAGAGACTCTTTGGCTGCCCAGCTGGAAATTACCCTTACCAAAGCAGATTCTGAGCAGCTGGCTCGTTCCATTGCTGAAGAACAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS TCA 72 bp | CCGCTGGTAGGTGAAAGACATGGATTCCATAGTGTGTaGCTGAGTGATATGGACTGGAAATCCATCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: PLVGERHGFHSV*LSDMDWKSIIR Trigger: CCTGATGATGGATTTCCAGTCCATATCACTCAGTCACACACTATGGAATCCATGTCTTTCACCTACCAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220688.2 |
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| CDS GCA 72 bp | ATAGATTTGCACTTCTGTTCCAGCTCCTCCTTGGCTTaGACCTCACTGCTAAGGTGTTCTTCTAGTGCATAT | + |
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Preference number: 6 (lower is better) Translates to: IDLHFCSSSSLA*TSLLRCSSSAY Trigger: ATATGCACTAGAAGAACACCTTAGCAGTGAGGTGCAAGCCAAGGAGGAGCTGGAACAGAAGTGCAAATCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS GCA 72 bp | TCAGAGTATTGTTCTTCAGCAATGGAACGAGCCAGCTaGTCAGAATCTGCTTTGGTAAGGGTAATTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SEYCSSAMERAS*SESALVRVISS Trigger: GCTGGAAATTACCCTTACCAAAGCAGATTCTGAGCAGCTGGCTCGTTCCATTGCTGAAGAACAATACTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 72 bp | TTCTCTTTTCTTCGCACATCTGTGTCACTACCACGCTaGACAGGTTCTTTTCGATTCATGATCTCCGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: FSFLRTSVSLPR*TGSFRFMISAN Trigger: GTTGGCGGAGATCATGAATCGAAAAGAACCTGTCAAGCGTGGTAGTGACACAGATGTGCGAAGAAAAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 72 bp | GCTTCACATCTCTGTGTATTAAGCCCATGGAGTGTATaGCATCCAGTGCAAGCACTACTTCAGCAGTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: ASHLCVLSPWSV*HPVQALLQQCK Trigger: TTTACACTGCTGAAGTAGTGCTTGCACTGGATGCAATACACTCCATGGGCTTAATACACAGAGATGTGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 90 bp | TCTAGGCGAGTATTAATAGATTTGCACTTCTGTTCCAGCTCCTCCTaGGCTTGCACCTCACTGCTAAGGTGTTCTTCTAGTGCATATAAT | + |
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Preference number: 6 (lower is better) Translates to: SRRVLIDLHFCSSSS*ACTSLLRCSSSAYN Trigger: ATTATATGCACTAGAAGAACACCTTAGCAGTGAGGTGCAAGCCAAGGAGGAGCTGGAACAGAAGTGCAAATCTATTAATACTCGCCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 90 bp | GTCGCTGTCTTTACTGTCCAGGGTCATCTGGAGTTCTATTCGAATTaGGCTCTCTTCAGCTATTTGAGCCTGCATTTCATTCAGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VAVFTVQGHLEFYSN*ALFSYLSLHFIQFF Trigger: AAAGAACTGAATGAAATGCAGGCTCAAATAGCTGAAGAGAGCCAAATTCGAATAGAACTCCAGATGACCCTGGACAGTAAAGACAGCGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CCA 72 bp | TGTTCAATGTCGCTGTCTTTACTGTCCAGGGTCATCTaGAGTTCTATTCGAATTTGGCTCTCTTCAGCTATT | + |
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Preference number: 6 (lower is better) Translates to: CSMSLSLLSRVI*SSIRIWLSSAI Trigger: AATAGCTGAAGAGAGCCAAATTCGAATAGAACTCCAGATGACCCTGGACAGTAAAGACAGCGACATTGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 72 bp | GGTGTTAACTTGTTGGGTCTGCATCTTCAGGTCATTTaGCATAAGACAACGCTTCTGAGTTTCCTGCTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: GVNLLGLHLQVI*HKTTLLSFLLY Trigger: ATAGAGCAGGAAACTCAGAAGCGTTGTCTTATGCAAAATGACCTGAAGATGCAGACCCAACAAGTTAACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS GCA 72 bp | TGGGCAGCCAAAGAGTCTCTTTCATCCTGTAAATCCTaGTTCTTCTGTTGCAACTCTTTACAAAGTTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: WAAKESLSSCKS*FFCCNSLQSFV Trigger: GACAAAACTTTGTAAAGAGTTGCAACAGAAGAAGCAGGATTTACAGGATGAAAGAGACTCTTTGGCTGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS GCA 72 bp | ATTCAGAAGCTGCTTCTCAAACTGTGCTTTAATAGCTaGTGCACTCATCTCTTCATCTTTCAACTTGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: IQKLLLKLCFNS*CTHLFIFQLGQ Trigger: CTGTCCAAGTTGAAAGATGAAGAGATGAGTGCAGCAGCTATTAAAGCACAGTTTGAGAAGCAGCTTCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 72 bp | TTTACTGTCCAGGGTCATCTGGAGTTCTATTCGAATTaGGCTCTCTTCAGCTATTTGAGCCTGCATTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: FTVQGHLEFYSN*ALFSYLSLHFI Trigger: AATGAAATGCAGGCTCAAATAGCTGAAGAGAGCCAAATTCGAATAGAACTCCAGATGACCCTGGACAGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 90 bp | CTTCAATGGATTCATAGATCTTATTTTTATCCGCTAGCCGTGCTTTaGTGGTCTTGTGTTCAGCTTCTTCTTGTTCTAAACTCTGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LQWIHRSYFYPLAVL*WSCVQLLLVLNSAV Trigger: TACAGCAGAGTTTAGAACAAGAAGAAGCTGAACACAAGACCACAAAAGCACGGCTAGCGGATAAAAATAAGATCTATGAATCCATTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 72 bp | TGGAGCTGCCGTCTCTCTTATGTTATCCCAATTCCATaGATCATTCTTAAAGAAAGGATGCTGTTTGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: WSCRLSYVIPIP*IILKERMLFDF Trigger: GAAATCAAACAGCATCCTTTCTTTAAGAATGATCAATGGAATTGGGATAACATAAGAGAGACGGCAGCTCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 90 bp | CTTACAATCACATACTTTTTAACCCATCCAAACTTTTTAGTGTTGTaGCGCACAGGCAATGACAACCATCCTTCTAATCTTGATTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LTITYFLTHPNFLVL*RTGNDNHPSNLDSG Trigger: TCCAGAATCAAGATTAGAAGGATGGTTGTCATTGCCTGTGCGCAACAACACTAAAAAGTTTGGATGGGTTAAAAAGTATGTGATTGTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000221463.2 |
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| CDS CAA 90 bp | CTGCTTACAATCACATACTTTTTAACCCATCCAAACTTTTTAGTGTaGTTGCGCACAGGCAATGACAACCATCCTTCTAATCTTGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLTITYFLTHPNFLV*LRTGNDNHPSNLDS Trigger: AGAATCAAGATTAGAAGGATGGTTGTCATTGCCTGTGCGCAACAACACTAAAAAGTTTGGATGGGTTAAAAAGTATGTGATTGTAAGCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 ENSMUST00000221463.2 |
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| CDS TCA 72 bp | TTATCTTGTAGATCTCTATTGTTAGATTCCAGCTGCTaGATCTGTTTGGAACTTTCTGCCTGGGTTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSCRSLLLDSSC*ICLELSAWVFL Trigger: AAGAAAAACCCAGGCAGAAAGTTCCAAACAGATTCAGCAGCTGGAATCTAACAATAGAGATCTACAAGATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS TCA 72 bp | TGGGTCCGGTCCCTTCTTTCAGATTCTAAAGCTGACTaGAGATTGATAAATTCCTTTTCAAGTTTTAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: WVRSLLSDSKAD*RLINSFSSFNL Trigger: CAAGTTAAAACTTGAAAAGGAATTTATCAATCTTCAGTCAGCTTTAGAATCTGAAAGAAGGGACCGGACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 72 bp | ATTCATAGATCTTATTTTTATCCGCTAGCCGTGCTTTaGTGGTCTTGTGTTCAGCTTCTTCTTGTTCTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: IHRSYFYPLAVL*WSCVQLLLVLN Trigger: GTTTAGAACAAGAAGAAGCTGAACACAAGACCACAAAAGCACGGCTAGCGGATAAAAATAAGATCTATGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 |
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| CDS CAA 72 bp | ATCACATACTTTTTAACCCATCCAAACTTTTTAGTGTaGTTGCGCACAGGCAATGACAACCATCCTTCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: ITYFLTHPNFLV*LRTGNDNHPSN Trigger: ATTAGAAGGATGGTTGTCATTGCCTGTGCGCAACAACACTAAAAAGTTTGGATGGGTTAAAAAGTATGTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020904.8 ENSMUST00000220688.2 ENSMUST00000221463.2 |
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| CDS CAA 90 bp | CTTACAATCACATACTTTTTAACCCATCCAAACTTTTTAGTGTTGTaGCGCACAGGCAATGACAACCATCCTTCTAATCTTGATTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LTITYFLTHPNFLVL*RTGNDNHPSNLDSV Trigger: TACAGAATCAAGATTAGAAGGATGGTTGTCATTGCCTGTGCGCAACAACACTAAAAAGTTTGGATGGGTTAAAAAGTATGTGATTGTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220688.2 |
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