Pregenerated sensors for RO60 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018199Ensembl transcript IDs: ENSMUST00000159879.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCTTACCCTGGGCATAGTGTTGCACACCTTTAGCCCTAGCACTTaGGAGGCAGAGGCAGGAGGCTCTCTGTTCAAGGCCAGCCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: SLTLGIVLHTFSPST*EAEAGGSLFKASLV Trigger: GACCAGGCTGGCCTTGAACAGAGAGCCTCCTGCCTCTGCCTCCCAAGTGCTAGGGCTAAAGGTGTGCAACACTATGCCCAGGGTAAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR CCA 90 bp | CCGGCAGGAACTGGTTTCTCCTCCTACCTTGTGGGGTCCAGGGACTaGGAACCATTCATCAAACTTGGTGGTGAGTGTCTTTACCCACGA | + |
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Preference number: 1 (lower is better) Translates to: PAGTGFSSYLVGSRD*EPFIKLGGECLYPR Trigger: TCGTGGGTAAAGACACTCACCACCAAGTTTGATGAATGGTTCCCAGTCCCTGGACCCCACAAGGTAGGAGGAGAAACCAGTTCCTGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR TCA 90 bp | CCTTGTGGGGTCCAGGGACTGGGAACCATTCATCAAACTTGGTGGTaGGTGTCTTTACCCACGATGACTATCTTGCTTGCCTTGGGACAA | + |
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Preference number: 1 (lower is better) Translates to: PCGVQGLGTIHQTWW*VSLPTMTILLALGQ Trigger: TTGTCCCAAGGCAAGCAAGATAGTCATCGTGGGTAAAGACACTCACCACCAAGTTTGATGAATGGTTCCCAGTCCCTGGACCCCACAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR TCA 90 bp | CTACAGAGGAAGCTACAGTATCCTGAAGACTTCTCAAGAGCTAGCTaGGTACATGCACCTTTGGGCTCAACTTTTGTCTCCTTCCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LQRKLQYPEDFSRAS*VHAPLGSTFVSFLL Trigger: CAGAAGGAAGGAGACAAAAGTTGAGCCCAAAGGTGCATGTACTCAGCTAGCTCTTGAGAAGTCTTCAGGATACTGTAGCTTCCTCTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR TCA 90 bp | TGGGAACCATTCATCAAACTTGGTGGTGAGTGTCTTTACCCACGATaGCTATCTTGCTTGCCTTGGGACAAAATGTTTAGGTCACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: WEPFIKLGGECLYPR*LSCLPWDKMFRSQE Trigger: TTCCTGTGACCTAAACATTTTGTCCCAAGGCAAGCAAGATAGTCATCGTGGGTAAAGACACTCACCACCAAGTTTGATGAATGGTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR CCA 90 bp | GGAGCTATACAACTGAACTTTTCATCCAGTGTTAAATATGCAACATaGTCCTTGGAGGTCATATTATGGCCAGGAAGTCCAGCTTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: GAIQLNFSSSVKYAT*SLEVILWPGSPASG Trigger: CCCAGAAGCTGGACTTCCTGGCCATAATATGACCTCCAAGGACCATGTTGCATATTTAACACTGGATGAAAAGTTCAGTTGTATAGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR GCA 90 bp | TCAAACTTGGTGGTGAGTGTCTTTACCCACGATGACTATCTTGCTTaGCTTGGGACAAAATGTTTAGGTCACAGGAAAATAACTCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SNLVVSVFTHDDYLA*LGTKCLGHRKITQR Trigger: TCTTTGAGTTATTTTCCTGTGACCTAAACATTTTGTCCCAAGGCAAGCAAGATAGTCATCGTGGGTAAAGACACTCACCACCAAGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR TCA 90 bp | AAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGAAGAGATaGTGGAGCAGGTATCAAGAGAACACAATAACTTCTGAGTTAAAC | + |
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Preference number: 1 (lower is better) Translates to: KREKWARSNLPWKKR*WSRYQENTITSELN Trigger: GTTTAACTCAGAAGTTATTGTGTTCTCTTGATACCTGCTCCATCATCTCTTCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR CCA 90 bp | TGTATAAAAATTTACCTGGTGAGGTTCATTTCCATCACAGTCACATaGTCTAGTGCACCTCAGAGTATTTGGACATTATTAAAACTGTCG | + |
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Preference number: 1 (lower is better) Translates to: CIKIYLVRFISITVT*SSAPQSIWTLLKLS Trigger: CGACAGTTTTAATAATGTCCAAATACTCTGAGGTGCACTAGACCATGTGACTGTGATGGAAATGAACCTCACCAGGTAAATTTTTATACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGACACTGTCAGGATTATaGACAGGGGAGTTACATACA | + |
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Preference number: 2 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGTLSGL*TGELHT Trigger: TGTATGTAACTCCCCTGTCCATAATCCTGACAGTGT...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGTGTCTAGCAGGGAAGTaGCTGTGTATTTTCAATGAA | + |
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Preference number: 2 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGCLAGK*LCIFNE Trigger: TTCATTGAAAATACACAGCCACTTCCCTGCTAGACA...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGAAAGGTGTGATTCAGTaGAGTAAAACACCACTATTG | + |
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Preference number: 2 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGKGVIQ*SKTPLL Trigger: CAATAGTGGTGTTTTACTTCACTGAATCACACCTTT...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGTACTGTCAGGAGGAATaGCTACATATGAAACTTCAT | + |
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Preference number: 2 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGYCQEE*LHMKLH Trigger: ATGAAGTTTCATATGTAGCCATTCCTCCTGACAGTA...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR CCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAATCTCCTCCTACCTTGTaGGGTCCAGGGACTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: YQENTITSELNTGLSHKESPPTL*GPGTGN Trigger: GTTCCCAGTCCCTGGACCCCACAAGGTAGGAGGAGA...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGTTTAGCCCTAGCACTTaGGAGGCAGAGGCAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: IELRGYMCHFLKLRSIRLFSPST*EAEAGG Trigger: GCCTCCTGCCTCTGCCTCCCAAGTGCTAGGGCTAAA...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCAAGACCAGGCTGGCCTTaGACTCAGAAAAATGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: DPKEISMSGKESLSYVKARPGWP*TQKNAC Trigger: GCAGGCATTTTTCTGAGTTCAAGGCCAGCCTGGTCT...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGAAAACCACTACAGCAGTaGCCCTCTCAGATCATTCTG | + |
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Preference number: 2 (lower is better) Translates to: GEDFAKEKNGREVIFHGRKPLQQ*PSQIIL Trigger: CAGAATGATCTGAGAGGGGCACTGCTGTAGTGGTTT...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR GCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCACAGAGAGTTGTGAGCTaGCATGTGGGTGCTGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: DPKEISMSGKESLSYVKAQRVVS*HVGAGN Trigger: ATTCCCAGCACCCACATGGCAGCTCACAACTCTCTG...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR CAA 90 bp | ATACATGAAACACCCAGGAAAGCGGAAGTACATGATACACTGTTGTaGTTCAGCCAACACAAGGCTACAAAGCAAATTCCTCAGCCTATA | + |
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Preference number: 2 (lower is better) Translates to: IHETPRKAEVHDTLL*FSQHKATKQIPQPI Trigger: TATAGGCTGAGGAATTTGCTTTGTAGCCTTGTGTTGGCTGAACAACAACAGTGTATCATGTACTTCCGCTTTCCTGGGTGTTTCATGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCAGGGGAGTTACATACATaGAACACCCAGGAAAGCGGA | + |
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Preference number: 2 (lower is better) Translates to: DPKEISMSGKESLSYVKAGELHT*NTQESG Trigger: TCCGCTTTCCTGGGTGTTTCATGTATGTAACTCCCC...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCAACCTGTCATCTTTGCTaGTCCTTCCTTCTGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: DPKEISMSGKESLSYVKATCHLC*SFLLAV Trigger: CACAGCCAGAAGGAAGGATCAGCAAAGATGACAGGT...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGAGTTACAGAGAGTTGTaGGCTGCCATGTGGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: IELRGYMCHFLKLRSIRLSYREL*AAMWVL Trigger: CAGCACCCACATGGCAGCTCACAACTCTCTGTAACT...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGAGAGTACATGCACCTTTaGGCTCAACTTTTGTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GEDFAKEKNGREVIFHGREYMHL*AQLLSP Trigger: AGGAGACAAAAGTTGAGCCCAAAGGTGCATGTACTC...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR CCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCAGTGGGGTCCAGGGACTaGGAACCATTCATCAAACTT | + |
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Preference number: 2 (lower is better) Translates to: DPKEISMSGKESLSYVKAVGSRD*EPFIKL Trigger: AAGTTTGATGAATGGTTCCCAGTCCCTGGACCCCAC...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGAGAATTAGTTAAGATGTaGCAGTGGTCAAGCCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GEDFAKEKNGREVIFHGRELVKM*QWSSQN Trigger: GTTCTGGCTTGACCACTGTCACATCTTAACTAATTC...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGACTTAAGAGATCTACCTaGCTCTGTTTCCCAGGAATA | + |
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Preference number: 2 (lower is better) Translates to: GEDFAKEKNGREVIFHGRLKRST*LCFPGI Trigger: TATTCCTGGGAAACAGAGGCAGGTAGATCTCTTAAG...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR CAA 90 bp | TTTGGTACACCTATCGATTTCTACAATAAACTGGTGACAAACAGTTaGTGTAGTGCCCACTCCACATCTGGAATGACTTACAAGTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: FGTPIDFYNKLVTNS*CSAHSTSGMTYKLS Trigger: GCTTAACTTGTAAGTCATTCCAGATGTGGAGTGGGCACTACACAAACTGTTTGTCACCAGTTTATTGTAGAAATCGATAGGTGTACCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCACGAAGTCTAGGAAAGTaGGAAGCAACCTGTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: DPKEISMSGKESLSYVKARSLGK*EATCQF Trigger: AAACTGACAGGTTGCTTCTCACTTTCCTAGACTTCG...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGGCATGTATGTCTCTGTaGTGGTGTAGGATTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: IELRGYMCHFLKLRSIRLACMSL*WCRIPR Trigger: TCTGGGAATCCTACACCATCACAGAGACATACATGC...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR CCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAGCTGATCCTTCCTTCTaGCTGTGTGACATTTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: YQENTITSELNTGLSHKEADPSF*LCDISL Trigger: TAGAGAAATGTCACACAGCCAGAAGGAAGGATCAGC...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCAGCTGTGTATTTTCAATaGAAACCACTACAGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: DPKEISMSGKESLSYVKAAVYFQ*KPLQQC Trigger: GCACTGCTGTAGTGGTTTTCATTGAAAATACACAGC...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGATTCAGAACAAAGGTGTaGTTCAGTGAAGTAAAACAC | + |
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Preference number: 2 (lower is better) Translates to: GEDFAKEKNGREVIFHGRFRTKV*FSEVKH Trigger: GTGTTTTACTTCACTGAATCACACCTTTGTTCTGAA...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAACATCTTGAGTTACTTTaGCTACAAGCACACCACACA | + |
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Preference number: 2 (lower is better) Translates to: YQENTITSELNTGLSHKEHLELL*LQAHHT Trigger: TGTGTGGTGTGCTTGTAGTCAAAGTAACTCAAGATG...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAATTCCTTCTGGCTGTGTaGCATTTCTCTAAGATGACA | + |
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Preference number: 2 (lower is better) Translates to: YQENTITSELNTGLSHKEFLLAV*HFSKMT Trigger: TGTCATCTTAGAGAAATGTCACACAGCCAGAAGGAA...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGACTCCTAGATATACTCTaGTTGCCTAAAAGCATTATC | + |
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Preference number: 2 (lower is better) Translates to: GEDFAKEKNGREVIFHGRLLDIL*LPKSII Trigger: GATAATGCTTTTAGGCAAGCAGAGTATATCTAGGAG...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR GCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCAACTCAGAAAAATGCCTaGCTCTGCCTCTTAAACCTT | + |
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Preference number: 2 (lower is better) Translates to: DPKEISMSGKESLSYVKATQKNA*LCLLNL Trigger: AAGGTTTAAGAGGCAGAGGCAGGCATTTTTCTGAGT...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGAAACCTGACTGTGGATaGTTTTCTGGTCCTGCAATT | + |
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Preference number: 2 (lower is better) Translates to: IELRGYMCHFLKLRSIRLKPDCG*FSGPAI Trigger: AATTGCAGGACCAGAAAATCATCCACAGTCAGGTTT...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR CCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAACTATCTTGCTTGCCTTaGGACAAAATGTTTAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: YQENTITSELNTGLSHKELSCLP*DKMFRS Trigger: TGACCTAAACATTTTGTCCCAAGGCAAGCAAGATAG...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGGACGATTTTGCATCTTaGGTTACTTTGACTACAAGC | + |
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Preference number: 2 (lower is better) Translates to: IELRGYMCHFLKLRSIRLDDFAS*VTLTTS Trigger: GCTTGTAGTCAAAGTAACTCAAGATGCAAAATCGTC...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGGTCTTCTCCTGTTCTTaGCAAAGTGCATTTCTATCA | + |
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Preference number: 2 (lower is better) Translates to: IELRGYMCHFLKLRSIRLVFSCS*QSAFLS Trigger: TGATAGAAATGCACTTTGGCAAGAACAGGAGAAGAC...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGGAGGTAATAATGCCTTaGTATGTGGCTAGATTCCAT | + |
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Preference number: 2 (lower is better) Translates to: IELRGYMCHFLKLRSIRLEVIMP*YVARFH Trigger: ATGGAATCTAGCCACATAGCAAGGCATTATTACCTC...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR GCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCATTAGCTTTCATTTCCTaGTTAGATGTACACTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: DPKEISMSGKESLSYVKALAFIS*LDVHFL Trigger: CAGGAAGTGTACATCTAAGCAGGAAATGAAAGCTAA...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR CCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAATGCATCACCACACTTaGCCTCTGTATTCAATTTTA | + |
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Preference number: 2 (lower is better) Translates to: YQENTITSELNTGLSHKEMHHHT*PLYSIL Trigger: TAAAATTGAATACAGAGGCCAAGTGTGGTGATGCAT...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGATTTCCACCCTGTTTTaGCCAAATAGTAACAAATCC | + |
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Preference number: 2 (lower is better) Translates to: IELRGYMCHFLKLRSIRLISTLF*PNSNKS Trigger: GGATTTGTTACTATTTGGGCAAAACAGGGTGGAAAT...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR GCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAAATCCAAGACGATTTTaGATCTTGAGTTACTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: YQENTITSELNTGLSHKENPRRF*ILSYFD Trigger: GTCAAAGTAACTCAAGATGCAAAATCGTCTTGGATT...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGATGATTTTCTGGTCCTaGAATTTATTACCCAACTGG | + |
|
Preference number: 2 (lower is better) Translates to: IELRGYMCHFLKLRSIRLMIFWS*NLLPNW Trigger: CCAGTTGGGTAATAAATTGCAGGACCAGAAAATCAT...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGCCACATATGTTGAACTaGTTGTTCATAATGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: IELRGYMCHFLKLRSIRLPHMLN*LFIMTQ Trigger: CTGTGTCATTATGAACAACCAGTTCAACATATGTGG...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCACAACATGACTTGATTTaGGCAAAGAACATATCAATC | + |
|
Preference number: 2 (lower is better) Translates to: DPKEISMSGKESLSYVKAQHDLI*AKNISI Trigger: GATTGATATGTTCTTTGCCCAAATCAAGTCATGTTG...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CCA 72 bp | CTGGGCATAGTGTTGCACACCTTTAGCCCTAGCACTTaGGAGGCAGAGGCAGGAGGCTCTCTGTTCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LGIVLHTFSPST*EAEAGGSLFKA Trigger: GGCCTTGAACAGAGAGCCTCCTGCCTCTGCCTCCCAAGTGCTAGGGCTAAAGGTGTGCAACACTATGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CCA 72 bp | GACAACCGGCAGGAACTGGTTTCTCCTCCTACCTTGTaGGGTCCAGGGACTGGGAACCATTCATCAAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: DNRQELVSPPTL*GPGTGNHSSNL Trigger: CAAGTTTGATGAATGGTTCCCAGTCCCTGGACCCCACAAGGTAGGAGGAGAAACCAGTTCCTGCCGGTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CCA 72 bp | ACTGGTTTCTCCTCCTACCTTGTGGGGTCCAGGGACTaGGAACCATTCATCAAACTTGGTGGTGAGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TGFSSYLVGSRD*EPFIKLGGECL Trigger: AAGACACTCACCACCAAGTTTGATGAATGGTTCCCAGTCCCTGGACCCCACAAGGTAGGAGGAGAAACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGCTTTGGGCTCAACTTTaGTCTCCTTCCTTCTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGLWAQL*SPSFCL Trigger: AAGACAGAAGGAAGGAGACAAAAGTTGAGCCCAAAG...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGAACCCTGGGCATAGTGTaGCACACCTTTAGCCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: GEDFAKEKNGREVIFHGRTLGIV*HTFSPS Trigger: GCTAGGGCTAAAGGTGTGCAACACTATGCCCAGGGT...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR TCA 72 bp | ACTGTGTCTAGCAGGGAAGTGGCTGTGTATTTTCAATaGAAACCACTACAGCAGTGCCCCTCTCAGATCATT | + |
|
Preference number: 3 (lower is better) Translates to: TVSSREVAVYFQ*KPLQQCPSQII Trigger: AATGATCTGAGAGGGGCACTGCTGTAGTGGTTTTCATTGAAAATACACAGCCACTTCCCTGCTAGACACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR TCA 72 bp | AAGCTACAGTATCCTGAAGACTTCTCAAGAGCTAGCTaGGTACATGCACCTTTGGGCTCAACTTTTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KLQYPEDFSRAS*VHAPLGSTFVS Trigger: GGAGACAAAAGTTGAGCCCAAAGGTGCATGTACTCAGCTAGCTCTTGAGAAGTCTTCAGGATACTGTAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CCA 72 bp | GTGACAGTGGTCAAGCCAGAACAGCATCAGAAGCAATaGTGTTTAGAACTGGAGCTGATACTATCTTTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VTVVKPEQHQKQ*CLELELILSLL Trigger: TAGCAAAGATAGTATCAGCTCCAGTTCTAAACACCATTGCTTCTGATGCTGTTCTGGCTTGACCACTGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR TCA 72 bp | ATGTACATTGGTGTTTTGCTTGCATGTATGTCTCTGTaGTGGTGTAGGATTCCCAGAACTGGAGTTACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: MYIGVLLACMSL*WCRIPRTGVTE Trigger: CTCTGTAACTCCAGTTCTGGGAATCCTACACCATCACAGAGACATACATGCAAGCAAAACACCAATGTACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CCA 72 bp | ACTTTTCATCCAGTGTTAAATATGCAACATGGTCCTTaGAGGTCATATTATGGCCAGGAAGTCCAGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TFHPVLNMQHGP*RSYYGQEVQLL Trigger: CAGAAGCTGGACTTCCTGGCCATAATATGACCTCCAAGGACCATGTTGCATATTTAACACTGGATGAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CCA 72 bp | CAACTGAACTTTTCATCCAGTGTTAAATATGCAACATaGTCCTTGGAGGTCATATTATGGCCAGGAAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QLNFSSSVKYAT*SLEVILWPGSP Trigger: TGGACTTCCTGGCCATAATATGACCTCCAAGGACCATGTTGCATATTTAACACTGGATGAAAAGTTCAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGAAACCATTCATCAAACTaGGTGGTGAGTGTCTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: GEDFAKEKNGREVIFHGRNHSSN*VVSVFT Trigger: GGTAAAGACACTCACCACCAAGTTTGATGAATGGTT...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCACATGATACACTGTTGTaGTTCAGCCAACACAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DPKEISMSGKESLSYVKAHDTLL*FSQHKA Trigger: AGCCTTGTGTTGGCTGAACAACAACAGTGTATCATG...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGCCCACGATGACTATCTaGCTTGCCTTGGGACAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: IELRGYMCHFLKLRSIRLPTMTI*LALGQN Trigger: ATTTTGTCCCAAGGCAAGCAAGATAGTCATCGTGGG...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGAAGAACCTGTCATCTTaGCTGATCCTTCCTTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: IELRGYMCHFLKLRSIRLKNLSS*LILPSG Trigger: GCCAGAAGGAAGGATCAGCAAAGATGACAGGTTCTT...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR TCA 72 bp | ATGGAATCCAAGACGATTTTGCATCTTGAGTTACTTTaGCTACAAGCACACCACACAACAACACAGACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: MESKTILHLELL*LQAHHTTTQTK Trigger: TTTGGTCTGTGTTGTTGTGTGGTGTGCTTGTAGTCAAAGTAACTCAAGATGCAAAATCGTCTTGGATTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR GCA 72 bp | CCTTGCTATGTGGCTAGATTCCATAGCAACATAGGCTaGAGAGACATAATTGTGTTTGAGAATTACTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PCYVARFHSNIG*RDIIVFENYSK Trigger: TTTGGAGTAATTCTCAAACACAATTATGTCTCTGCAGCCTATGTTGCTATGGAATCTAGCCACATAGCAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CAA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAATGTCTTCTCCTGTTCTaGCCAAAGTGCATTTCTATC | + |
|
Preference number: 3 (lower is better) Translates to: YQENTITSELNTGLSHKECLLLF*PKCISI Trigger: GATAGAAATGCACTTTGGCAAGAACAGGAGAAGACA...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGATGCACCTCAGAGTATTaGGACATTATTAAAACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GEDFAKEKNGREVIFHGRCTSEY*DIIKTV Trigger: GACAGTTTTAATAATGTCCAAATACTCTGAGGTGCA...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CAA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAGTACATGATACACTGTaGTTGTTCAGCCAACACAAG | + |
|
Preference number: 3 (lower is better) Translates to: YQENTITSELNTGLSHKEVHDTL*LFSQHK Trigger: CTTGTGTTGGCTGAACAACAACAGTGTATCATGTAC...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR TCA 72 bp | CATTGGTATAATTTTTCTTGTCGAAGTCTAGGAAAGTaGGAAGCAACCTGTCAGTTTGTCTGCTGTAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: HWYNFSCRSLGK*EATCQFVCCRL Trigger: AAGTCTACAGCAGACAAACTGACAGGTTGCTTCTCACTTTCCTAGACTTCGACAAGAAAAATTATACCAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR TCA 72 bp | AACAAAACCAATGGAATCCAAGACGATTTTGCATCTTaGGTTACTTTGACTACAAGCACACCACACAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: NKTNGIQDDFAS*VTLTTSTPHNN Trigger: GTTGTTGTGTGGTGTGCTTGTAGTCAAAGTAACTCAAGATGCAAAATCGTCTTGGATTCCATTGGTTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CCA 72 bp | CTGTTTCCCAGGAATAAAGGCATGCATCACCACACTTaGCCTCTGTATTCAATTTTAATCTCTTTAATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LFPRNKGMHHHT*PLYSILISLIR Trigger: CCTAATTAAAGAGATTAAAATTGAATACAGAGGCCAAGTGTGGTGATGCATGCCTTTATTCCTGGGAAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CCA 72 bp | CTTGGAGGTCATATTATGGCCAGGAAGTCCAGCTTCTaGGTAACTGGTTATACAAAACAATACAAAATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGGHIMARKSSF*VTGYTKQYKIL Trigger: TAAGATTTTGTATTGTTTTGTATAACCAGTTACCCAGAAGCTGGACTTCCTGGCCATAATATGACCTCCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR TCA 72 bp | GTTCTACTTACTAGCATATCCCTTCCTAACACACCCTaGAAACAGTTACTAAGTAACAGTTTTAATACGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VLLTSISLPNTP*KQLLSNSFNTW Trigger: CCACGTATTAAAACTGTTACTTAGTAACTGTTTTCAGGGTGTGTTAGGAAGGGATATGCTAGTAAGTAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGACATTGGTGTTTTGCTaGCATGTATGTCTCTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: IELRGYMCHFLKLRSIRLTLVFC*HVCLCD Trigger: ATCACAGAGACATACATGCAAGCAAAACACCAATGT...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCATGTCACTTTCTGAAATaGCGGTCAATTAGATTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: DPKEISMSGKESLSYVKACHFLK*RSIRLH Trigger: ATGCAATCTAATTGACCGCAATTTCAGAAAGTGACA...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR TCA 72 bp | AAGAAAAGAAACACTTCTCATACAAGTGACATGATGTaGGGCTACTTATACTCTGTATCACACTTTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KKRNTSHTSDMM*GYLYSVSHFQN Trigger: GTTCTGAAAGTGTGATACAGAGTATAAGTAGCCTCACATCATGTCACTTGTATGAGAAGTGTTTCTTTTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CAA 72 bp | GAGGACAACCGGCAGGAACTGGTTTCTCCTCCTACCTaGTGGGGTCCAGGGACTGGGAACCATTCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EDNRQELVSPPT*WGPGTGNHSSN Trigger: GTTTGATGAATGGTTCCCAGTCCCTGGACCCCACAAGGTAGGAGGAGAAACCAGTTCCTGCCGGTTGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CAA 72 bp | TCTCCAAAACCATCCAGCCTTACCCTGGGCATAGTGTaGCACACCTTTAGCCCTAGCACTTGGGAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPKPSSLTLGIV*HTFSPSTWEAE Trigger: CTCTGCCTCCCAAGTGCTAGGGCTAAAGGTGTGCAACACTATGCCCAGGGTAAGGCTGGATGGTTTTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGGCAGTGGCTCTTGTTTaGCAGTCCTGCCTTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGAVALV*QSCLPD Trigger: GTCAGGAAGGCAGGACTGCCAAACAAGAGCCACTGC...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGGGAACAAACGGCCAGTaGAAACAGCAGTGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGGTNGQ*KQQWLL Trigger: CAAGAGCCACTGCTGTTTGCACTGGCCGTTTGTTCC...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGCCAGGTCGTCTTTCGTaGGCTTCACTTTCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGPGRLS*ASLSPQ Trigger: CTGTGGAGAAAGTGAAGCGCACGAAAGACGACCTGG...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR TCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGTACACAGCCGCCCTCTaGGTTAACTACTTGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGYTAAL*VNYLSL Trigger: GAGACTCAAGTAGTTAACTCAGAGGGCGGCTGTGTA...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR TCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGGCAGTCCTGCCTTCCTaGCTAAAGGACTTGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGAVLPS*LKDLIS Trigger: GGAAATCAAGTCCTTTAGTCAGGAAGGCAGGACTGC...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGGCTGTGTCTGTTTTCTaGGCCCAGATCATTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGAVSVF*AQIIGR Trigger: TCTCCCAATGATCTGGGCCCAGAAAACAGACACAGC...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGCATGCCTCTATCGTCTaGGTCTGCAATGGTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGHASIV*VCNGKA Trigger: GGCTTTACCATTGCAGACCCAGACGATAGAGGCATG...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAGTACCAGTCTGCCACTaGCTTCCGGAGGGCGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: YQENTITSELNTGLSHKEVPVCH*LPEGAT Trigger: GGTCGCGCCCTCCGGAAGGCAGTGGCAGACTGGTAC...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGGAGAGCAATCCGTGTTaGCTGCTGGAACTTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGESNPC*LLELYS Trigger: TGAATAAAGTTCCAGCAGGCAACACGGATTGCTCTC...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | TTTACCTATACTGTAGGAGGGCTGCCGGGAGGTGACCCTTATTTCCCTTATGGGATAAAAGTGAAGAGGTaGGTCGGAATGCGACACACT | + |
|
Preference number: 4 (lower is better) Translates to: FTYTVGGLPGGDPYFPYGIKVKR*VGMRHT Trigger: AGTGTGTCGCATTCCGACCCACCTCTTCACTTTTAT...CCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAGGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CAA 72 bp | TTGTGGGGTCCAGGGACTGGGAACCATTCATCAAACTaGGTGGTGAGTGTCTTTACCCACGATGACTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWGPGTGNHSSN*VVSVFTHDDYL Trigger: AAGATAGTCATCGTGGGTAAAGACACTCACCACCAAGTTTGATGAATGGTTCCCAGTCCCTGGACCCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR TCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCACAGCCTCCAGGTACTTaGGCAGCTTCTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DPKEISMSGKESLSYVKAQPPGT*AASQPP Trigger: TGGAGGCTGAGAAGCTGCTCAAGTACCTGGAGGCTG...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR TCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAACTTCAGTTTCCCTCTaGGCCCGTGGCCTGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YQENTITSELNTGLSHKETSVSL*ARGLLC Trigger: ACAGAGCAGGCCACGGGCTCAGAGGGAAACTGAAGT...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGGGGCGCGACCCCACATaGCACACTTCATGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IELRGYMCHFLKLRSIRLGRDPT*HTSCSP Trigger: AGGAGAGCATGAAGTGTGGCATGTGGGGTCGCGCCC...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAATTCATTGTACCAGTCTaGCACTGCCTTCCGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YQENTITSELNTGLSHKEFIVPV*HCLPEG Trigger: GCCCTCCGGAAGGCAGTGGCAGACTGGTACAATGAA...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGAGGGCAACAGCAGGATaGACCTGCCCTGCAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IELRGYMCHFLKLRSIRLRATAG*TCPAKV Trigger: GACCTTTGCAGGGCAGGTGCATCCTGCTGTTGCCCT...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CAA 72 bp | ACACCCAGGAAAGCGGAAGTACATGATACACTGTTGTaGTTCAGCCAACACAAGGCTACAAAGCAAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPRKAEVHDTLL*FSQHKATKQIP Trigger: AGGAATTTGCTTTGTAGCCTTGTGTTGGCTGAACAACAACAGTGTATCATGTACTTCCGCTTTCCTGGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGATTGAGTCTCACTCAGTaGCTGCAACTGGTTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEDFAKEKNGREVIFHGRLSLTQ*LQLVCR Trigger: TCTGCAAACCAGTTGCAGCCACTGAGTGAGACTCAA...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAACTGGGCCCAGATCATTaGGAGAGAGCAATCCGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YQENTITSELNTGLSHKELGPDH*ERAIRV Trigger: AACACGGATTGCTCTCTCCCAATGATCTGGGCCCAG...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CAA 72 bp | GAAACACCCAGGAAAGCGGAAGTACATGATACACTGTaGTTGTTCAGCCAACACAAGGCTACAAAGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: ETPRKAEVHDTL*LFSQHKATKQI Trigger: AATTTGCTTTGTAGCCTTGTGTTGGCTGAACAACAACAGTGTATCATGTACTTCCGCTTTCCTGGGTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGATCCTGGTTCAAGCACTaGATTAGCAGTCATCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GEDFAKEKNGREVIFHGRSWFKH*ISSHLS Trigger: GGAAAGATGACTGCTAATTCAGTGCTTGAACCAGGA...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAGTCTCACTCAGTGGCTaGAACTGGTTTGCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: YQENTITSELNTGLSHKEVSLSG*NWFADP Trigger: AGGATCTGCAAACCAGTTGCAGCCACTGAGTGAGAC...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGAACATGCCACACTTCATaGTCTCCTTCAGGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GEDFAKEKNGREVIFHGRTCHTS*SPSGLS Trigger: AGAAAGACCTGAAGGAGAGCATGAAGTGTGGCATGT...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCAAACCACCATGCACATTaGTGCGGCAACAGTACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPKEISMSGKESLSYVKANHHAH*CGNSTS Trigger: GCTAGTACTGTTGCCGCAGCAATGTGCATGGTGGTT...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CAA 72 bp | AACTTTTCATCCAGTGTTAAATATGCAACATGGTCCTaGGAGGTCATATTATGGCCAGGAAGTCCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NFSSSVKYATWS*EVILWPGSPAS Trigger: AGAAGCTGGACTTCCTGGCCATAATATGACCTCCAAGGACCATGTTGCATATTTAACACTGGATGAAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CAA 72 bp | CCTATCGATTTCTACAATAAACTGGTGACAAACAGTTaGTGTAGTGCCCACTCCACATCTGGAATGACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PIDFYNKLVTNS*CSAHSTSGMTY Trigger: GTAAGTCATTCCAGATGTGGAGTGGGCACTACACAAACTGTTTGTCACCAGTTTATTGTAGAAATCGATAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAACACCATGCACATTGCTaGGGCAACAGTACTAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: YQENTITSELNTGLSHKEHHAHC*GNSTSI Trigger: AATGCTAGTACTGTTGCCGCAGCAATGTGCATGGTG...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCAAGGATGCACCTGCCCTaGAAAGGTCTCATTATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DPKEISMSGKESLSYVKARMHLP*KGLIIS Trigger: ACTGATAATGAGACCTTTGCAGGGCAGGTGCATCCT...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGACAGCAGGATGCACCTaGCCTGCAAAGGTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: IELRGYMCHFLKLRSIRLTAGCT*PAKVSL Trigger: TAATGAGACCTTTGCAGGGCAGGTGCATCCTGCTGT...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS-3UTR TCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCACCAGCTTCTGTTCTTTaGTATAGTACGTGCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPKEISMSGKESLSYVKAPASVL*YSTCHL Trigger: AAGGTGGCACGTACTATATCAAAGAACAGAAGCTGG...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR TCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCATGCTCTTCAATCAGATaGATGACTTCCAGGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DPKEISMSGKESLSYVKACSSIR*MTSRSS Trigger: AGACGACCTGGAAGTCATTCATCTGATTGAAGAGCA...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGACAAGATGTCTTTATCTaGAATCCACTTCAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GEDFAKEKNGREVIFHGRQDVFI*NPLQFP Trigger: GGGAAACTGAAGTGGATTCCAGATAAAGACATCTTG...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCAATCCGTGTTGCCTGCTaGAACTTTATTCATAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: DPKEISMSGKESLSYVKAIRVAC*NFIHSR Trigger: ACGGCTATGAATAAAGTTCCAGCAGGCAACACGGAT...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CAA 72 bp | GTTAACATAATGCCCGTGGAAAGTTCCATAGACCAATaGCAAAGTCACAGCCAAAGCAAGTCCATTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VNIMPVESSIDQ*QSHSQSKSIKT Trigger: TGTTTTAATGGACTTGCTTTGGCTGTGACTTTGCAATTGGTCTATGGAACTTTCCACGGGCATTATGTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR TCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAGTATACGAGCCTTTTTaGGCAGCTTTTCATTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YQENTITSELNTGLSHKEVYEPF*AAFHCS Trigger: TGAGCAATGAAAAGCTGCTCAAAAAGGCTCGTATAC...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGAAATGGTAAAGCCATTTaGTGTCATCCCACAAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GEDFAKEKNGREVIFHGRNGKAI*CHPTNN Trigger: ATTGTTTGTGGGATGACATCAAATGGCTTTACCATT...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAGCTTTAAAGGCTGCTTaGTTTGTGTTTATGTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: YQENTITSELNTGLSHKEALKAA*FVFMSA Trigger: TGCGGACATAAACACAAAGCAAGCAGCCTTTAAAGC...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAGCAGCATCTAAGGCTTaGAAGATGTCTTTATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YQENTITSELNTGLSHKEAASKA*KMSLSG Trigger: TCCAGATAAAGACATCTTGCAAGCCTTAGATGCTGC...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAAATTACATCCAGAGCTaGAGTATCAAAGCCGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: YQENTITSELNTGLSHKENYIQS*SIKAAH Trigger: ATGTGCGGCTTTGATACTGCAGCTCTGGATGTAATT...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGAAGGTCTTTCTTAAACTaGATAAAAGTGAAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEDFAKEKNGREVIFHGRRSFLN*IKVKRW Trigger: CCACCTCTTCACTTTTATCCAGTTTAAGAAAGACCT...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCAGAAGCGCTTCCCAGTTaGTTCAACAGTCTTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: DPKEISMSGKESLSYVKAEALPS*FNSLKC Trigger: ACATTTAAGACTGTTGAACCAACTGGGAAGCGCTTC...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGCATGTCTGTAGTCACTaGAAACGGAACCATATCACA | + |
|
Preference number: 4 (lower is better) Translates to: IELRGYMCHFLKLRSIRLHVCSH*KRNHIT Trigger: TGTGATATGGTTCCGTTTCCAGTGACTACAGACATG...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| 3UTR CAA 72 bp | CCGTACTATTTACTTAAGAGTCACCCTAGTGGTAATTaGGAAAAGAAAACTTGTTTACCACTTGAGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: PYYLLKSHPSGN*EKKTCLPLEGI Trigger: GATACCCTCAAGTGGTAAACAAGTTTTCTTTTCCAAATTACCACTAGGGTGACTCTTAAGTAAATAGTACGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGTCTTTATACTCTTCATaGACTTCTTTCCAGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IELRGYMCHFLKLRSIRLSLYSS*TSFQPF Trigger: AAAGGGCTGGAAAGAAGTCCATGAAGAGTATAAAGA...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| 3UTR CAA 72 bp | AAGCAATGGTGTTTAGAACTGGAGCTGATACTATCTTaGCTAATAACACTGAAAATTTGTTACTGTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQWCLELELILS*LITLKICYCQE Trigger: CTCCTGACAGTAACAAATTTTCAGTGTTATTAGCAAAGATAGTATCAGCTCCAGTTCTAAACACCATTGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS GCA 90 bp | CAGCGCCACGGCCATGCCGCCTTTTTCATTGTACCAGTCTGCCACTaGCTTCCGGAGGGCGCGACCCCACATGCCACACTTCATGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRHGHAAFFIVPVCH*LPEGATPHATLHAL Trigger: GAGAGCATGAAGTGTGGCATGTGGGGTCGCGCCCTCCGGAAGGCAGTGGCAGACTGGTACAATGAAAAAGGCGGCATGGCCGTGGCGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS TCA 90 bp | GCGCAGCCGGTTCATGTCGGTGACCTGCCATACACAGCCGCCCTCTaGGTTAACTACTTGAGTCTCACTCAGTGGCTGCAACTGGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AQPVHVGDLPYTAAL*VNYLSLTQWLQLVC Trigger: GCAAACCAGTTGCAGCCACTGAGTGAGACTCAAGTAGTTAACTCAGAGGGCGGCTGTGTATGGCAGGTCACCGACATGAACCGGCTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS GCA 90 bp | GAGGTGGGTCGGAATGCGACACACTTCAGGGACAGCTTTAAAGGCTaGTTGCTTTGTGTTTATGTCCGCACACTGGGAACAAACGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EVGRNATHFRDSFKG*LLCVYVRTLGTNGQ Trigger: CTGGCCGTTTGTTCCCAGTGTGCGGACATAAACACAAAGCAAGCAGCCTTTAAAGCTGTCCCTGAAGTGTGTCGCATTCCGACCCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS TCA 90 bp | GCCAGTGCAAACAGCAGTGGCTCTTGTTTGGCAGTCCTGCCTTCCTaGCTAAAGGACTTGATTTCCTGGATCACTTCACATCCTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASANSSGSCLAVLPS*LKDLISWITSHPLP Trigger: CGGCAGAGGATGTGAAGTGATCCAGGAAATCAAGTCCTTTAGTCAGGAAGGCAGGACTGCCAAACAAGAGCCACTGCTGTTTGCACTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS GCA 90 bp | TGCTTGCTTTGTGTTTATGTCCGCACACTGGGAACAAACGGCCAGTaGAAACAGCAGTGGCTCTTGTTTGGCAGTCCTGCCTTCCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: CLLCVYVRTLGTNGQ*KQQWLLFGSPAFLT Trigger: AGTCAGGAAGGCAGGACTGCCAAACAAGAGCCACTGCTGTTTGCACTGGCCGTTTGTTCCCAGTGTGCGGACATAAACACAAAGCAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS GCA 90 bp | TGGGTCGGAATGCGACACACTTCAGGGACAGCTTTAAAGGCTGCTTaGTTTGTGTTTATGTCCGCACACTGGGAACAAACGGCCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WVGMRHTSGTALKAA*FVFMSAHWEQTASA Trigger: TGCACTGGCCGTTTGTTCCCAGTGTGCGGACATAAACACAAAGCAAGCAGCCTTTAAAGCTGTCCCTGAAGTGTGTCGCATTCCGACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS TCA 90 bp | GGTCGTCTTTCGTGCGCTTCACTTTCTCCACAGCCTCCAGGTACTTaGGCAGCTTCTCAGCCTCCACAGAAAGCGCCTTTTCTTTATACT | + |
|
Preference number: 5 (lower is better) Translates to: GRLSCASLSPQPPGT*AASQPPQKAPFLYT Trigger: AGTATAAAGAAAAGGCGCTTTCTGTGGAGGCTGAGAAGCTGCTCAAGTACCTGGAGGCTGTGGAGAAAGTGAAGCGCACGAAAGACGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS CCA 90 bp | GTTTATGTCCGCACACTGGGAACAAACGGCCAGTGCAAACAGCAGTaGCTCTTGTTTGGCAGTCCTGCCTTCCTGACTAAAGGACTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VYVRTLGTNGQCKQQ*LLFGSPAFLTKGLD Trigger: ATCAAGTCCTTTAGTCAGGAAGGCAGGACTGCCAAACAAGAGCCACTGCTGTTTGCACTGGCCGTTTGTTCCCAGTGTGCGGACATAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS CCA 90 bp | GGGACAGCTTTAAAGGCTGCTTGCTTTGTGTTTATGTCCGCACACTaGGAACAAACGGCCAGTGCAAACAGCAGTGGCTCTTGTTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTALKAACFVFMSAH*EQTASANSSGSCLA Trigger: TGCCAAACAAGAGCCACTGCTGTTTGCACTGGCCGTTTGTTCCCAGTGTGCGGACATAAACACAAAGCAAGCAGCCTTTAAAGCTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS GCA 90 bp | CACCGAAGACTCTTTTTCTGTCCGTGTAACCACCATGCACATTGCTaGGGCAACAGTACTAGCATTGAGTACACTACCCAAGGCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HRRLFFCPCNHHAHC*GNSTSIEYTTQGSL Trigger: CAGAGAGCCTTGGGTAGTGTACTCAATGCTAGTACTGTTGCCGCAGCAATGTGCATGGTGGTTACACGGACAGAAAAAGAGTCTTCGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS GCA 90 bp | CTGCCCTGCAAAGGTCTCATTATCAGTAAACACAACGAAGACATCTaGGGCTGTGTCTGTTTTCTGGGCCCAGATCATTGGGAGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPCKGLIISKHNEDI*GCVCFLGPDHWERA Trigger: TGCTCTCTCCCAATGATCTGGGCCCAGAAAACAGACACAGCCGCAGATGTCTTCGTTGTGTTTACTGATAATGAGACCTTTGCAGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS GCA 90 bp | TTTCTTTCGGTACTCTCTCAGGGCAACAGCAGGATGCACCTGCCCTaGAAAGGTCTCATTATCAGTAAACACAACGAAGACATCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLSVLSQGNSRMHLP*KGLIISKHNEDICG Trigger: GCCGCAGATGTCTTCGTTGTGTTTACTGATAATGAGACCTTTGCAGGGCAGGTGCATCCTGCTGTTGCCCTGAGAGAGTACCGAAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS CCA 90 bp | AACGAAGACATCTGCGGCTGTGTCTGTTTTCTGGGCCCAGATCATTaGGAGAGAGCAATCCGTGTTGCCTGCTGGAACTTTATTCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: NEDICGCVCFLGPDH*ERAIRVACWNFIHS Trigger: GCTATGAATAAAGTTCCAGCAGGCAACACGGATTGCTCTCTCCCAATGATCTGGGCCCAGAAAACAGACACAGCCGCAGATGTCTTCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS CCA 90 bp | TTATCAGTAAACACAACGAAGACATCTGCGGCTGTGTCTGTTTTCTaGGCCCAGATCATTGGGAGAGAGCAATCCGTGTTGCCTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSVNTTKTSAAVSVF*AQIIGREQSVLPAG Trigger: TCCAGCAGGCAACACGGATTGCTCTCTCCCAATGATCTGGGCCCAGAAAACAGACACAGCCGCAGATGTCTTCGTTGTGTTTACTGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS GCA 90 bp | AACCACCGAAGACTCTTTTTCTGTCCGTGTAACCACCATGCACATTaGTGCGGCAACAGTACTAGCATTGAGTACACTACCCAAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NHRRLFFCPCNHHAH*CGNSTSIEYTTQGS Trigger: AGAGCCTTGGGTAGTGTACTCAATGCTAGTACTGTTGCCGCAGCAATGTGCATGGTGGTTACACGGACAGAAAAAGAGTCTTCGGTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS GCA 90 bp | TCCATTTTCTTTCGGTACTCTCTCAGGGCAACAGCAGGATGCACCTaGCCTGCAAAGGTCTCATTATCAGTAAACACAACGAAGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: SIFFRYSLRATAGCT*PAKVSLSVNTTKTS Trigger: AGATGTCTTCGTTGTGTTTACTGATAATGAGACCTTTGCAGGGCAGGTGCATCCTGCTGTTGCCCTGAGAGAGTACCGAAAGAAAATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
||
| CDS GCA 90 bp | GGAATATCCATTTTCTTTCGGTACTCTCTCAGGGCAACAGCAGGATaGACCTGCCCTGCAAAGGTCTCATTATCAGTAAACACAACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GISIFFRYSLRATAG*TCPAKVSLSVNTTK Trigger: CTTCGTTGTGTTTACTGATAATGAGACCTTTGCAGGGCAGGTGCATCCTGCTGTTGCCCTGAGAGAGTACCGAAAGAAAATGGATATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CCA 90 bp | ATGCTCTCCTTCAGGTCTTTCTTAAACTGGATAAAAGTGAAGAGGTaGGTCGGAATGCGACACACTTCAGGGACAGCTTTAAAGGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: MLSFRSFLNWIKVKR*VGMRHTSGTALKAA Trigger: AGCAGCCTTTAAAGCTGTCCCTGAAGTGTGTCGCATTCCGACCCACCTCTTCACTTTTATCCAGTTTAAGAAAGACCTGAAGGAGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS-3UTR CAA 90 bp | GGAGAAGACTTTGCAAAAGAGAAAAATGGGCGAGAAGTAATCTTCCATGGAAGATCTGGGCCCAGATCATaGGGAGAGAGCAATCCGTGT | + |
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Preference number: 5 (lower is better) Translates to: GEDFAKEKNGREVIFHGRSGPRS*GESNPC Trigger: ACACGGATTGCTCTCTCCCAATGATCTGGGCCCAGA...TCTTCCATGGAAGATTACTTCTCGCCCATTTTTCTCTTTTGCAAAGTCTTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS-3UTR CAA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCAACAGCCTCCAGGTACTaGAGCAGCTTCTCAGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: DPKEISMSGKESLSYVKATASRY*SSFSAS Trigger: GGAGGCTGAGAAGCTGCTCAAGTACCTGGAGGCTGT...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS GCA 90 bp | CAATCCGTGTTGCCTGCTGGAACTTTATTCATAGCCGTTAAAACCTaGTGTAATGTCATGTCTGTAGTCACTGGAAACGGAACCATATCA | + |
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Preference number: 5 (lower is better) Translates to: QSVLPAGTLFIAVKT*CNVMSVVTGNGTIS Trigger: TGATATGGTTCCGTTTCCAGTGACTACAGACATGACATTACAGCAGGTTTTAACGGCTATGAATAAAGTTCCAGCAGGCAACACGGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CCA 90 bp | AGCTTCTCAGCCTCCACAGAAAGCGCCTTTTCTTTATACTCTTCATaGACTTCTTTCCAGCCCTTTGTGATATACTTGGTCACAATAGCA | + |
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Preference number: 5 (lower is better) Translates to: SFSASTESAFSLYSS*TSFQPFVIYLVTIA Trigger: TGCTATTGTGACCAAGTATATCACAAAGGGCTGGAAAGAAGTCCATGAAGAGTATAAAGAAAAGGCGCTTTCTGTGGAGGCTGAGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS TCA 90 bp | ATCCAACATGCCTCTATCGTCTGGGTCTGCAATGGTAAAGCCATTTaGTGTCATCCCACAAACAATCAATTTAGCAGGAATATCCATTTT | + |
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Preference number: 5 (lower is better) Translates to: IQHASIVWVCNGKAI*CHPTNNQFSRNIHF Trigger: AAAATGGATATTCCTGCTAAATTGATTGTTTGTGGGATGACATCAAATGGCTTTACCATTGCAGACCCAGACGATAGAGGCATGTTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS-3UTR CAA 90 bp | TATCAAGAGAACACAATAACTTCTGAGTTAAACACCGGCTTGTCTCACAAAGAAAGCTTTAAAGGCTGCTaGCTTTGTGTTTATGTCCGC | + |
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Preference number: 5 (lower is better) Translates to: YQENTITSELNTGLSHKESFKGC*LCVYVR Trigger: GCGGACATAAACACAAAGCAAGCAGCCTTTAAAGCT...TTCTTTGTGAGACAAGCCGGTGTTTAACTCAGAAGTTATTGTGTTCTCTTGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS-3UTR CAA 90 bp | GACCCTAAAGAAATTAGTATGTCTGGAAAAGAGAGCTTGTCATATGTTAAGGCACCCTTTGTGATATACTaGGTCACAATAGCAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: DPKEISMSGKESLSYVKAPFVIY*VTIASP Trigger: AGGACTTGCTATTGTGACCAAGTATATCACAAAGGG...TGCCTTAACATATGACAAGCTCTCTTTTCCAGACATACTAATTTCTTTAGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS-3UTR CAA 90 bp | ATAGAACTGAGAGGATATATGTGTCACTTTCTGAAATTGCGGTCAATTAGATTGTGTATACGAGCCTTTTaGAGCAGCTTTTCATTGCTC | + |
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Preference number: 5 (lower is better) Translates to: IELRGYMCHFLKLRSIRLCIRAF*SSFSLL Trigger: GAGCAATGAAAAGCTGCTCAAAAAGGCTCGTATACA...CAATCTAATTGACCGCAATTTCAGAAAGTGACACATATATCCTCTCAGTTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 72 bp | GTAACCACCAGCGCCACGGCCATGCCGCCTTTTTCATaGTACCAGTCTGCCACTGCCTTCCGGAGGGCGCGA | + |
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Preference number: 6 (lower is better) Translates to: VTTSATAMPPFS*YQSATAFRRAR Trigger: TCGCGCCCTCCGGAAGGCAGTGGCAGACTGGTACAATGAAAAAGGCGGCATGGCCGTGGCGCTGGTGGTTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS GCA 72 bp | GGCCATGCCGCCTTTTTCATTGTACCAGTCTGCCACTaGCTTCCGGAGGGCGCGACCCCACATGCCACACTT | + |
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Preference number: 6 (lower is better) Translates to: GHAAFFIVPVCH*LPEGATPHATL Trigger: AAGTGTGGCATGTGGGGTCGCGCCCTCCGGAAGGCAGTGGCAGACTGGTACAATGAAAAAGGCGGCATGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 90 bp | TTATACTTTGTAACCACCAGCGCCACGGCCATGCCGCCTTTTTCATaGTACCAGTCTGCCACTGCCTTCCGGAGGGCGCGACCCCACATG | + |
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Preference number: 6 (lower is better) Translates to: LYFVTTSATAMPPFS*YQSATAFRRARPHM Trigger: CATGTGGGGTCGCGCCCTCCGGAAGGCAGTGGCAGACTGGTACAATGAAAAAGGCGGCATGGCCGTGGCGCTGGTGGTTACAAAGTATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS TCA 72 bp | TCGTGCGCTTCACTTTCTCCACAGCCTCCAGGTACTTaGGCAGCTTCTCAGCCTCCACAGAAAGCGCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SCASLSPQPPGT*AASQPPQKAPF Trigger: AAAAGGCGCTTTCTGTGGAGGCTGAGAAGCTGCTCAAGTACCTGGAGGCTGTGGAGAAAGTGAAGCGCACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CCA 72 bp | CGCACACTGGGAACAAACGGCCAGTGCAAACAGCAGTaGCTCTTGTTTGGCAGTCCTGCCTTCCTGACTAAA | + |
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Preference number: 6 (lower is better) Translates to: RTLGTNGQCKQQ*LLFGSPAFLTK Trigger: TTTAGTCAGGAAGGCAGGACTGCCAAACAAGAGCCACTGCTGTTTGCACTGGCCGTTTGTTCCCAGTGTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 72 bp | CATCTGCGGCTGTGTCTGTTTTCTGGGCCCAGATCATaGGGAGAGAGCAATCCGTGTTGCCTGCTGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: HLRLCLFSGPRS*GESNPCCLLEL Trigger: AAGTTCCAGCAGGCAACACGGATTGCTCTCTCCCAATGATCTGGGCCCAGAAAACAGACACAGCCGCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 90 bp | GTCCGCACACTGGGAACAAACGGCCAGTGCAAACAGCAGTGGCTCTaGTTTGGCAGTCCTGCCTTCCTGACTAAAGGACTTGATTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VRTLGTNGQCKQQWL*FGSPAFLTKGLDFL Trigger: CAGGAAATCAAGTCCTTTAGTCAGGAAGGCAGGACTGCCAAACAAGAGCCACTGCTGTTTGCACTGGCCGTTTGTTCCCAGTGTGCGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 90 bp | GTGGGTCGGAATGCGACACACTTCAGGGACAGCTTTAAAGGCTGCTaGCTTTGTGTTTATGTCCGCACACTGGGAACAAACGGCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: VGRNATHFRDSFKGC*LCVYVRTLGTNGQC Trigger: GCACTGGCCGTTTGTTCCCAGTGTGCGGACATAAACACAAAGCAAGCAGCCTTTAAAGCTGTCCCTGAAGTGTGTCGCATTCCGACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 90 bp | AAGGTGGGACAGTCGGAGGAGATCTTTGTGAGACCAGCCGTTTCGTaGTTTATACTTTGTAACCACCAGCGCCACGGCCATGCCGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: KVGQSEEIFVRPAVS*FILCNHQRHGHAAF Trigger: AAAGGCGGCATGGCCGTGGCGCTGGTGGTTACAAAGTATAAACAACGAAACGGCTGGTCTCACAAAGATCTCCTCCGACTGTCCCACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS TCA 72 bp | GTTCATGTCGGTGACCTGCCATACACAGCCGCCCTCTaGGTTAACTACTTGAGTCTCACTCAGTGGCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VHVGDLPYTAAL*VNYLSLTQWLQ Trigger: TTGCAGCCACTGAGTGAGACTCAAGTAGTTAACTCAGAGGGCGGCTGTGTATGGCAGGTCACCGACATGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CCA 72 bp | ATCTGCGGCTGTGTCTGTTTTCTGGGCCCAGATCATTaGGAGAGAGCAATCCGTGTTGCCTGCTGGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: ICGCVCFLGPDH*ERAIRVACWNF Trigger: AAAGTTCCAGCAGGCAACACGGATTGCTCTCTCCCAATGATCTGGGCCCAGAAAACAGACACAGCCGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 72 bp | CTGGGAACAAACGGCCAGTGCAAACAGCAGTGGCTCTaGTTTGGCAGTCCTGCCTTCCTGACTAAAGGACTT | + |
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Preference number: 6 (lower is better) Translates to: LGTNGQCKQQWL*FGSPAFLTKGL Trigger: AAGTCCTTTAGTCAGGAAGGCAGGACTGCCAAACAAGAGCCACTGCTGTTTGCACTGGCCGTTTGTTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 90 bp | GTCCGTGTAACCACCATGCACATTGCTGCGGCAACAGTACTAGCATaGAGTACACTACCCAAGGCTCTCTGGTTCATAGAGGCACTGACG | + |
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Preference number: 6 (lower is better) Translates to: VRVTTMHIAAATVLA*STLPKALWFIEALT Trigger: CGTCAGTGCCTCTATGAACCAGAGAGCCTTGGGTAGTGTACTCAATGCTAGTACTGTTGCCGCAGCAATGTGCATGGTGGTTACACGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CCA 72 bp | AACACAACGAAGACATCTGCGGCTGTGTCTGTTTTCTaGGCCCAGATCATTGGGAGAGAGCAATCCGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: NTTKTSAAVSVF*AQIIGREQSVL Trigger: CAACACGGATTGCTCTCTCCCAATGATCTGGGCCCAGAAAACAGACACAGCCGCAGATGTCTTCGTTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS GCA 72 bp | GTACTCTCTCAGGGCAACAGCAGGATGCACCTGCCCTaGAAAGGTCTCATTATCAGTAAACACAACGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: VLSQGNSRMHLP*KGLIISKHNED Trigger: GTCTTCGTTGTGTTTACTGATAATGAGACCTTTGCAGGGCAGGTGCATCCTGCTGTTGCCCTGAGAGAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS GCA 72 bp | TTTCGGTACTCTCTCAGGGCAACAGCAGGATGCACCTaGCCTGCAAAGGTCTCATTATCAGTAAACACAACG | + |
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Preference number: 6 (lower is better) Translates to: FRYSLRATAGCT*PAKVSLSVNTT Trigger: CGTTGTGTTTACTGATAATGAGACCTTTGCAGGGCAGGTGCATCCTGCTGTTGCCCTGAGAGAGTACCGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CCA 72 bp | TTAAAGGCTGCTTGCTTTGTGTTTATGTCCGCACACTaGGAACAAACGGCCAGTGCAAACAGCAGTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LKAACFVFMSAH*EQTASANSSGS Trigger: AGAGCCACTGCTGTTTGCACTGGCCGTTTGTTCCCAGTGTGCGGACATAAACACAAAGCAAGCAGCCTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 72 bp | ACCACCATGCACATTGCTGCGGCAACAGTACTAGCATaGAGTACACTACCCAAGGCTCTCTGGTTCATAGAG | + |
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Preference number: 6 (lower is better) Translates to: TTMHIAAATVLA*STLPKALWFIE Trigger: CTCTATGAACCAGAGAGCCTTGGGTAGTGTACTCAATGCTAGTACTGTTGCCGCAGCAATGTGCATGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 72 bp | TTCTGGGCCCAGATCATTGGGAGAGAGCAATCCGTGTaGCCTGCTGGAACTTTATTCATAGCCGTTAAAACC | + |
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Preference number: 6 (lower is better) Translates to: FWAQIIGREQSV*PAGTLFIAVKT Trigger: GGTTTTAACGGCTATGAATAAAGTTCCAGCAGGCAACACGGATTGCTCTCTCCCAATGATCTGGGCCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 90 bp | GTGTCTGTTTTCTGGGCCCAGATCATTGGGAGAGAGCAATCCGTGTaGCCTGCTGGAACTTTATTCATAGCCGTTAAAACCTGCTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: VSVFWAQIIGREQSV*PAGTLFIAVKTCCN Trigger: ATTACAGCAGGTTTTAACGGCTATGAATAAAGTTCCAGCAGGCAACACGGATTGCTCTCTCCCAATGATCTGGGCCCAGAAAACAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS TCA 72 bp | AGGCTTCAGCATTCTCAAGGCCCAGCTTCTGTTCTTTaGTATAGTACGTGCCACCTTCAGAGCCAAAACACA | + |
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Preference number: 6 (lower is better) Translates to: RLQHSQGPASVL*YSTCHLQSQNT Trigger: TGTGTTTTGGCTCTGAAGGTGGCACGTACTATATCAAAGAACAGAAGCTGGGCCTTGAGAATGCTGAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS TCA 72 bp | GAAGGCTTAAGGTGGGACAGTCGGAGGAGATCTTTGTaGGACCAGCCGTTTCGTTGTTTATACTTTGTAACC | + |
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Preference number: 6 (lower is better) Translates to: EGLRWDSRRRSL*DQPFRCLYFVT Trigger: GGTTACAAAGTATAAACAACGAAACGGCTGGTCTCACAAAGATCTCCTCCGACTGTCCCACCTTAAGCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS GCA 72 bp | CTCTTTTTCTGTCCGTGTAACCACCATGCACATTGCTaGGGCAACAGTACTAGCATTGAGTACACTACCCAA | + |
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Preference number: 6 (lower is better) Translates to: LFFCPCNHHAHC*GNSTSIEYTTQ Trigger: TTGGGTAGTGTACTCAATGCTAGTACTGTTGCCGCAGCAATGTGCATGGTGGTTACACGGACAGAAAAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS GCA 72 bp | AGACTCTTTTTCTGTCCGTGTAACCACCATGCACATTaGTGCGGCAACAGTACTAGCATTGAGTACACTACC | + |
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Preference number: 6 (lower is better) Translates to: RLFFCPCNHHAH*CGNSTSIEYTT Trigger: GGTAGTGTACTCAATGCTAGTACTGTTGCCGCAGCAATGTGCATGGTGGTTACACGGACAGAAAAAGAGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS GCA 72 bp | AAAGGTCTCATTATCAGTAAACACAACGAAGACATCTaGGGCTGTGTCTGTTTTCTGGGCCCAGATCATTGG | + |
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Preference number: 6 (lower is better) Translates to: KGLIISKHNEDI*GCVCFLGPDHW Trigger: CCAATGATCTGGGCCCAGAAAACAGACACAGCCGCAGATGTCTTCGTTGTGTTTACTGATAATGAGACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS GCA 72 bp | GACATCCAATGTGAAATTCCGAATTACATCCAGAGCTaGAGTATCAAAGCCGCACATATCCAACATGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DIQCEIPNYIQS*SIKAAHIQHAS Trigger: AGAGGCATGTTGGATATGTGCGGCTTTGATACTGCAGCTCTGGATGTAATTCGGAATTTCACATTGGATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CCA 72 bp | ACTGACGTCAACAGCGAGCAAGAAGCGCTTCCCAGTTaGTTCAACAGTCTTAAATGTTGTATAAAAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TDVNSEQEALPS*FNSLKCCIKSS Trigger: GCTGCTTTTTATACAACATTTAAGACTGTTGAACCAACTGGGAAGCGCTTCTTGCTCGCTGTTGACGTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS GCA 72 bp | TTGCCTGCTGGAACTTTATTCATAGCCGTTAAAACCTaGTGTAATGTCATGTCTGTAGTCACTGGAAACGGA | + |
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Preference number: 6 (lower is better) Translates to: LPAGTLFIAVKT*CNVMSVVTGNG Trigger: TCCGTTTCCAGTGACTACAGACATGACATTACAGCAGGTTTTAACGGCTATGAATAAAGTTCCAGCAGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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| CDS CAA 72 bp | TCTTCATGGACTTCTTTCCAGCCCTTTGTGATATACTaGGTCACAATAGCAAGTCCTTCACTGGAAGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: SSWTSFQPFVIY*VTIASPSLEGL Trigger: TAAGCCTTCCAGTGAAGGACTTGCTATTGTGACCAAGTATATCACAAAGGGCTGGAAAGAAGTCCATGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159879.2 |
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