Pregenerated sensors for RNMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009535Ensembl transcript IDs: ENSMUST00000009679.11, ENSMUST00000025427.14, ENSMUST00000129849.2, ENSMUST00000131075.8, ENSMUST00000139111.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAATTAGACAGCGGGGTCTGCCTTAGGGAGGGAGTCCCAGTGTTGTaGGACGGGCAGGAGCTGCATGTTGGGACCTGGAAGGATACAGCA | + |
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Preference number: 1 (lower is better) Translates to: QLDSGVCLREGVPVL*DGQELHVGTWKDTA Trigger: TGCTGTATCCTTCCAGGTCCCAACATGCAGCTCCTGCCCGTCTCACAACACTGGGACTCCCTCCCTAAGGCAGACCCCGCTGTCTAATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR GCA 90 bp | AGCTCTGTAAACACATTCACACATCCCAGCACTGGGGAGGTCAGCTaGTCACACATCACAGCACTGGGGAGGTCAGCTGCTCTGACATGC | + |
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Preference number: 1 (lower is better) Translates to: SSVNTFTHPSTGEVS*SHITALGRSAALTC Trigger: GCATGTCAGAGCAGCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTGAATGTGTTTACAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR CCA 90 bp | CGACTGTCAAATCAGCTCTGTAAACACATTCACACATCCCAGCACTaGGGAGGTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: RLSNQLCKHIHTSQH*GGQLLTHHSTGEVS Trigger: GCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTGAATGTGTTTACAGAGCTGATTTGACAGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR GCA 90 bp | TTCCCATTCTTGTCCTCAAGAATCCATCCTGAGTCACTGAACTTCTaGAAGGAGGGGTGGAGGGATGGACGTTCAACAGAGAGGAACACA | + |
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Preference number: 1 (lower is better) Translates to: FPFLSSRIHPESLNF*KEGWRDGRSTERNT Trigger: TGTGTTCCTCTCTGTTGAACGTCCATCCCTCCACCCCTCCTTGCAGAAGTTCAGTGACTCAGGATGGATTCTTGAGGACAAGAATGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR CCA 90 bp | CTGACAATGACAATCATGATGGCTGTGGGACAGCAAGTAAACCCTTaGAAGGCAGCCACGCCGACTACTACACCATTAACGTCTCAACAG | + |
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Preference number: 1 (lower is better) Translates to: LTMTIMMAVGQQVNP*KAATPTTTPLTSQQ Trigger: CTGTTGAGACGTTAATGGTGTAGTAGTCGGCGTGGCTGCCTTCCAAGGGTTTACTTGCTGTCCCACAGCCATCATGATTGTCATTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR TCA 90 bp | ACGGGCAGGAGCTGCATGTTGGGACCTGGAAGGATACAGCATTGGTaGGTGAGTTGTCTTATTGGTGAGGATTCATCTGAAATGCATCTC | + |
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Preference number: 1 (lower is better) Translates to: TGRSCMLGPGRIQHW*VSCLIGEDSSEMHL Trigger: GAGATGCATTTCAGATGAATCCTCACCAATAAGACAACTCACTCACCAATGCTGTATCCTTCCAGGTCCCAACATGCAGCTCCTGCCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR TCA 90 bp | GCAGGAGCTGCATGTTGGGACCTGGAAGGATACAGCATTGGTGAGTaGGTTGTCTTATTGGTGAGGATTCATCTGAAATGCATCTCACTG | + |
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Preference number: 1 (lower is better) Translates to: AGAACWDLEGYSIGE*VVLLVRIHLKCISL Trigger: CAGTGAGATGCATTTCAGATGAATCCTCACCAATAAGACAACTCACTCACCAATGCTGTATCCTTCCAGGTCCCAACATGCAGCTCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR GCA 90 bp | GTATTCTGCCTGCACATTATATGTATGTACTATGCACATGCCTGGTaGCCAGGGAGGCCAAAAGATGATGTCAGATCCCCTGGAACTAGA | + |
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Preference number: 1 (lower is better) Translates to: VFCLHIICMYYAHAW*PGRPKDDVRSPGTR Trigger: TCTAGTTCCAGGGGATCTGACATCATCTTTTGGCCTCCCTGGGCACCAGGCATGTGCATAGTACATACATATAATGTGCAGGCAGAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR TCA 90 bp | GCATACATTTCACAAGTCCGGTTAGAGGACCAGGTCTCCACACCGTaGAGAATAATCTATCTCTATTCCTGCCAGGGTACCTTATGTACT | + |
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Preference number: 1 (lower is better) Translates to: AYISQVRLEDQVSTP*RIIYLYSCQGTLCT Trigger: AGTACATAAGGTACCCTGGCAGGAATAGAGATAGATTATTCTTCACGGTGTGGAGACCTGGTCCTCTAACCGGACTTGTGAAATGTATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR GCA 90 bp | AAGTTTCAACAGGGCTCTGTTTTTGAGAAATCTCTATCTTCTCTCTaGCACTCAGTTATCAGACAGGGTCCACTACTTATGAGTGACTCT | + |
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Preference number: 1 (lower is better) Translates to: KFQQGSVFEKSLSSL*HSVIRQGPLLMSDS Trigger: AGAGTCACTCATAAGTAGTGGACCCTGTCTGATAACTGAGTGGCAGAGAGAAGATAGAGATTTCTCAAAAACAGAGCCCTGTTGAAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR CCA 90 bp | TTTAGGTTCCAAGAATGCTGGGCAAAGTCTTATTTGTTGAAACAATaGAAAAGACCACCTTCCCATTCTTGTCCTCAAGAATCCATCCTG | + |
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Preference number: 1 (lower is better) Translates to: FRFQECWAKSYLLKQ*KRPPSHSCPQESIL Trigger: CAGGATGGATTCTTGAGGACAAGAATGGGAAGGTGGTCTTTTCCATTGTTTCAACAAATAAGACTTTGCCCAGCATTCTTGGAACCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR TCA 90 bp | ATTAAACATTTAGGTTCCAAGAATGCTGGGCAAAGTCTTATTTGTTaGAACAATGGAAAAGACCACCTTCCCATTCTTGTCCTCAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: IKHLGSKNAGQSLIC*NNGKDHLPILVLKN Trigger: ATTCTTGAGGACAAGAATGGGAAGGTGGTCTTTTCCATTGTTTCAACAAATAAGACTTTGCCCAGCATTCTTGGAACCTAAATGTTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR GCA 90 bp | CTAACTCTGTGCTGCCATCTAAGTTCGTCTATAGAGTCTCAGAATTaGAGTGTATTAGCAAATAGTTATTTTATTGAAACACGGTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: LTLCCHLSSSIESQN*SVLANSYFIETRSK Trigger: TTTTGACCGTGTTTCAATAAAATAACTATTTGCTAATACACTGCAATTCTGAGACTCTATAGACGAACTTAGATGGCAGCACAGAGTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR TCA 90 bp | CCCATCCACCCACAACCCACAACCCCCGCACCAGAACCAAATCTACCCTCTAAAGCGCAGCCAGCACTCTaGACTACTGAGCCACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PIHPQPTTPAPEPNLPSKAQPAL*TTEPPL Trigger: GAGAGGTGGCTCAGTAGTTCAGAGTGCTGGCTGCGC...TTTAGAGGGTAGATTTGGTTCTGGTGCGGGGGTTGTGGGTTGTGGGTGGATGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR GCA 90 bp | ACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATCACAGCACTGGGGAGGTCGTTTCTGAGATGGTCTaGTCCACCTGGGAGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: TSQHWGGQLLTHHSTGEVVSEMV*STWEDG Trigger: TCCATCCTCCCAGGTGGAGCAGACCATCTCAGAAAC...GACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR-3UTR CCA 90 bp | ATTCACACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATCACAGCACTGGGATGGTCTGCTCCACCTaGGAGGATGGAGTGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: IHTSQHWGGQLLTHHSTGMVCST*EDGVLL Trigger: GAGCAGCACTCCATCCTCCCAGGTGGAGCAGACCAT...CCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAGCTGCTCTGACATGCCTTCCTGGGAGGATGGAGTaGTGCTCTAAAGCAACGTGC | + |
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Preference number: 2 (lower is better) Translates to: VSCSHITALGRSAALTCLPGRME*CSKATC Trigger: GCACGTTGCTTTAGAGCAGCACTCCATCCTCCCAGG...AAGGCATGTCAGAGCAGCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTGTGAGACGGGCAGGAGCTGCATGTTGGGACCTGGAAGGATACAGCATTCCTGGGAGGATGGAGTaGTGCTCTAAAGCAACGTGC | + |
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Preference number: 2 (lower is better) Translates to: SVVRRAGAACWDLEGYSIPGRME*CSKATC Trigger: GCACGTTGCTTTAGAGCAGCACTCCATCCTCCCAGG...AATGCTGTATCCTTCCAGGTCCCAACATGCAGCTCCTGCCCGTCTCACAACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR TCA 90 bp | CACACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAAATTCATACACTaGAGTTTGTGGCAGCATCCT | + |
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Preference number: 2 (lower is better) Translates to: HTSQHWGGQLLTHHSTGEVKFIH*SLWQHP Trigger: AGGATGCTGCCACAAACTTCAGTGTATGAATTTGAC...CTCCCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR-3UTR TCA 90 bp | TATCTGAACAGCCCATCTGAACCATTTTCATCACTGAACCCAAGAGAAGGGACTGGAGTCCCAGTGTTGTaGGACGGGCAGGAGCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: YLNSPSEPFSSLNPREGTGVPVL*DGQELH Trigger: ATGCAGCTCCTGCCCGTCTCACAACACTGGGACTCC...AGTCCCTTCTCTTGGGTTCAGTGATGAAAATGGTTCAGATGGGCTGTTCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAGCCACGCCGACTACTACACCATTAACGTCTCAACAGTTAATGTCTGAATTAGACAGCGGGGTCTaGCTTAGGGAGGGAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: KAATPTTTPLTSQQLMSELDSGV*LREGVP Trigger: TGGGACTCCCTCCCTAAGGCAGACCCCGCTGTCTAA...TTCAGACATTAACTGTTGAGACGTTAATGGTGTAGTAGTCGGCGTGGCTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR CCA 90 bp | TCTAGCGACTGTCAAATCAGCTCTGTAAACACATTCACACATCCCAGCACTGGGCTCCACCTGGGAGGATaGAGTGCTGCTCTAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SSDCQISSVNTFTHPSTGLHLGG*SAALKQ Trigger: TTGCTTTAGAGCAGCACTCCATCCTCCCAGGTGGAG...CCCAGTGCTGGGATGTGTGAATGTGTTTACAGAGCTGATTTGACAGTCGCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR CAA 90 bp | ACTGACAATGACAATCATGATGGCTGTGGGACAGCAAGTAAACCCTaGGAAGGCAGCCACGCCGACTACTACACCATTAACGTCTCAACA | + |
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Preference number: 2 (lower is better) Translates to: TDNDNHDGCGTASKP*EGSHADYYTINVST Trigger: TGTTGAGACGTTAATGGTGTAGTAGTCGGCGTGGCTGCCTTCCAAGGGTTTACTTGCTGTCCCACAGCCATCATGATTGTCATTGTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR CCA 90 bp | CCCCCGCACCAGAACCAAATCTACCCTCTAAATACTAAGAACAGTGACTATATAATGGTCTGCTCCACCTaGGAGGATGGAGTGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PPHQNQIYPLNTKNSDYIMVCST*EDGVLL Trigger: GAGCAGCACTCCATCCTCCCAGGTGGAGCAGACCAT...TATATAGTCACTGTTCTTAGTATTTAGAGGGTAGATTTGGTTCTGGTGCGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR CCA 90 bp | TCTAGCGACTGTCAAATCAGCTCTGTAAACACATTCACACATCCCAGCACTGGGCAAATGTTTCTGAGATaGTCTGCTCCACCTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SSDCQISSVNTFTHPSTGQMFLR*SAPPGR Trigger: CCTCCCAGGTGGAGCAGACCATCTCAGAAACATTTG...CCCAGTGCTGGGATGTGTGAATGTGTTTACAGAGCTGATTTGACAGTCGCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTAAACACATTCACACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATGTCAAATTCATACACTaGAGTTTGTGGCAGCATCCT | + |
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Preference number: 2 (lower is better) Translates to: LCKHIHTSQHWGGQLLTHVKFIH*SLWQHP Trigger: AGGATGCTGCCACAAACTTCAGTGTATGAATTTGAC...ATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTGAATGTGTTTACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR-3UTR GCA 90 bp | TATCTGAACAGCCCATCTGAACCATTTTCATCACTGAACCCAAGAGAAGGGACTTATGCACATGCCTGGTaGCCAGGGAGGCCAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: YLNSPSEPFSSLNPREGTYAHAW*PGRPKD Trigger: ATCTTTTGGCCTCCCTGGGCACCAGGCATGTGCATA...AGTCCCTTCTCTTGGGTTCAGTGATGAAAATGGTTCAGATGGGCTGTTCAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR GCA 90 bp | GACGGCTCTCTAACTGACAATGACAATCATGATGGCTGTGGGACAGCAAGTAAAAAATGCATCTCACTGTaGTGTTCCTACTGCACGTGC | + |
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Preference number: 2 (lower is better) Translates to: DGSLTDNDNHDGCGTASKKCISL*CSYCTC Trigger: GCACGTGCAGTAGGAACAGCACAGTGAGATGCATTT...TTTACTTGCTGTCCCACAGCCATCATGATTGTCATTGTCAGTTAGAGAGCCGTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR TCA 90 bp | AAGGCAGCCACGCCGACTACTACACCATTAACGTCTCAACAGTTAATGTCTGAAGGAATCACTGTCCAGTaGAGTTACTCGTACCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: KAATPTTTPLTSQQLMSEGITVQ*SYSYLN Trigger: ATTAAGGTACGAGTAACTTCACTGGACAGTGATTCC...TTCAGACATTAACTGTTGAGACGTTAATGGTGTAGTAGTCGGCGTGGCTGCCTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR GCA 90 bp | GTGTCAAATTCATACACTGAAGTTTGTGGCAGCATCCTACACATTGAGAACTTAGTTTCTGAGATGGTCTaGTCCACCTGGGAGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: VSNSYTEVCGSILHIENLVSEMV*STWEDG Trigger: TCCATCCTCCCAGGTGGAGCAGACCATCTCAGAAAC...TAAGTTCTCAATGTGTAGGATGCTGCCACAAACTTCAGTGTATGAATTTGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTATGTACACACATTATGCTAACCTGTCACAGACAGTAAGTGTCAAATTCCTCCACCTGGGAGGATaGAGTGCTGCTCTAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: IPMYTHYANLSQTVSVKFLHLGG*SAALKQ Trigger: TTGCTTTAGAGCAGCACTCCATCCTCCCAGGTGGAG...GAATTTGACACTTACTGTCTGTGACAGGTTAGCATAATGTGTGTACATAGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR-3UTR GCA 90 bp | TATCTGAACAGCCCATCTGAACCATTTTCATCACTGAACCCAAGAGAAGGGACTAAGGAAAAAGGCAGCTaGTTGAACTGTTTCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: YLNSPSEPFSSLNPREGTKEKGS*LNCFCR Trigger: CCTACAGAAACAGTTCAAGCAGCTGCCTTTTTCCTT...AGTCCCTTCTCTTGGGTTCAGTGATGAAAATGGTTCAGATGGGCTGTTCAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR CCA 90 bp | ACTCTTAACCTGAGATCTCTGTCTCCAGCCCCTGATCTTCATTTGGAAACAACCTGTAGGGTGACATCATaGAAACTCTCCTATGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: TLNLRSLSPAPDLHLETTCRVTS*KLSYVF Trigger: AAAGACATAGGAGAGTTTCCATGATGTCACCCTACA...GGTTGTTTCCAAATGAAGATCAGGGGCTGGAGACAGAGATCTCAGGTTAAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR GCA 90 bp | CAAAGACTAAAGGAGAGTGCTGAAGTACCTTTAATTGGAGGTACAGGTAGTTCTTCAGCTGCTCTGACATaGCTTGCTAGAGTTTTGACA | + |
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Preference number: 2 (lower is better) Translates to: QRLKESAEVPLIGGTGSSSAALT*LARVLT Trigger: TGTCAAAACTCTAGCAAGGCATGTCAGAGCAGCTGA...AGAACTACCTGTACCTCCAATTAAAGGTACTTCAGCACTCTCCTTTAGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR CCA 90 bp | GAGAAATCTCTATCTTCTCTCTGCCACTCAGTTATCAGACAGGGTCCACTACTTCATCGGAAAACATTATaGAACACAATTAGGACGTGG | + |
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Preference number: 2 (lower is better) Translates to: EKSLSSLCHSVIRQGPLLHRKTL*NTIRTW Trigger: CCACGTCCTAATTGTGTTCCATAATGTTTTCCGATG...AAGTAGTGGACCCTGTCTGATAACTGAGTGGCAGAGAGAAGATAGAGATTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR TCA 90 bp | CAAAGACTAAAGGAGAGTGCTGAAGTACCTTTAATTGGAGGTACAGGTAGTTCTAGGATACAGCATTGGTaGGTGAGTTGTCTTATTGGT | + |
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Preference number: 2 (lower is better) Translates to: QRLKESAEVPLIGGTGSSRIQHW*VSCLIG Trigger: ACCAATAAGACAACTCACTCACCAATGCTGTATCCT...AGAACTACCTGTACCTCCAATTAAAGGTACTTCAGCACTCTCCTTTAGTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR CAA 90 bp | ATTTCTCTTCTTGCTGCTTGGGATAACCATCAATTATTCCACCCTTaGAAGAATTCTTCTCTCCTAAAAATGACCCATGGGATGGAATGG | + |
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Preference number: 2 (lower is better) Translates to: ISLLAAWDNHQLFHP*KNSSLLKMTHGMEW Trigger: CCATTCCATCCCATGGGTCATTTTTAGGAGAGAAGAATTCTTCAAAGGGTGGAATAATTGATGGTTATCCCAAGCAGCAAGAAGAGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR TCA 72 bp | AGCGGGGTCTGCCTTAGGGAGGGAGTCCCAGTGTTGTaGGACGGGCAGGAGCTGCATGTTGGGACCTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SGVCLREGVPVL*DGQELHVGTWK Trigger: CTTCCAGGTCCCAACATGCAGCTCCTGCCCGTCTCACAACACTGGGACTCCCTCCCTAAGGCAGACCCCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR GCA 72 bp | AACACATTCACACATCCCAGCACTGGGGAGGTCAGCTaGTCACACATCACAGCACTGGGGAGGTCAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: NTFTHPSTGEVS*SHITALGRSAA Trigger: AGCAGCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTGAATGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR CCA 72 bp | AATCAGCTCTGTAAACACATTCACACATCCCAGCACTaGGGAGGTCAGCTGCTCACACATCACAGCACTGGG | + |
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Preference number: 3 (lower is better) Translates to: NQLCKHIHTSQH*GGQLLTHHSTG Trigger: CCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTGAATGTGTTTACAGAGCTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| 3UTR TCA 72 bp | TCCCATTCTTGTCCTCAAGAATCCATCCTGAGTCACTaGACTTCTGCAAGGAGGGGTGGAGGGATGGACGTT | + |
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Preference number: 3 (lower is better) Translates to: SHSCPQESILSH*TSARRGGGMDV Trigger: AACGTCCATCCCTCCACCCCTCCTTGCAGAAGTTCAGTGACTCAGGATGGATTCTTGAGGACAAGAATGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR CCA 72 bp | ACAATCATGATGGCTGTGGGACAGCAAGTAAACCCTTaGAAGGCAGCCACGCCGACTACTACACCATTAACG | + |
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Preference number: 3 (lower is better) Translates to: TIMMAVGQQVNP*KAATPTTTPLT Trigger: CGTTAATGGTGTAGTAGTCGGCGTGGCTGCCTTCCAAGGGTTTACTTGCTGTCCCACAGCCATCATGATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR TCA 72 bp | TCACAAGTCCGGTTAGAGGACCAGGTCTCCACACCGTaGAGAATAATCTATCTCTATTCCTGCCAGGGTACC | + |
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Preference number: 3 (lower is better) Translates to: SQVRLEDQVSTP*RIIYLYSCQGT Trigger: GGTACCCTGGCAGGAATAGAGATAGATTATTCTTCACGGTGTGGAGACCTGGTCCTCTAACCGGACTTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR CCA 72 bp | ATCCATCCTGAGTCACTGAACTTCTGCAAGGAGGGGTaGAGGGATGGACGTTCAACAGAGAGGAACACAAAA | + |
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Preference number: 3 (lower is better) Translates to: IHPESLNFCKEG*RDGRSTERNTK Trigger: TTTTGTGTTCCTCTCTGTTGAACGTCCATCCCTCCACCCCTCCTTGCAGAAGTTCAGTGACTCAGGATGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR TCA 72 bp | TGTGTGACAGGCCTAGACGTATCTGAACAGCCCATCTaGACCATTTTCATCACTGAACCCAAGAGAAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: CVTGLDVSEQPI*TIFITEPKRRD Trigger: GTCCCTTCTCTTGGGTTCAGTGATGAAAATGGTTCAGATGGGCTGTTCAGATACGTCTAGGCCTGTCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR GCA 72 bp | CTGCACATTATATGTATGTACTATGCACATGCCTGGTaGCCAGGGAGGCCAAAAGATGATGTCAGATCCCCT | + |
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Preference number: 3 (lower is better) Translates to: LHIICMYYAHAW*PGRPKDDVRSP Trigger: AGGGGATCTGACATCATCTTTTGGCCTCCCTGGGCACCAGGCATGTGCATAGTACATACATATAATGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR-3UTR CAA 90 bp | GAGAAATCTCTATCTTCTCTCTGCCACTCAGTTATCAGACAGGGTCCACTACTTTACTGCTGTGCAGCTTaGTCCCCAAGCCAACTACCT | + |
|
Preference number: 3 (lower is better) Translates to: EKSLSSLCHSVIRQGPLLYCCAA*SPSQLP Trigger: AGGTAGTTGGCTTGGGGACAAAGCTGCACAGCAGTA...AAGTAGTGGACCCTGTCTGATAACTGAGTGGCAGAGAGAAGATAGAGATTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR TCA 72 bp | AGCTGCATGTTGGGACCTGGAAGGATACAGCATTGGTaGGTGAGTTGTCTTATTGGTGAGGATTCATCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SCMLGPGRIQHW*VSCLIGEDSSE Trigger: TTCAGATGAATCCTCACCAATAAGACAACTCACTCACCAATGCTGTATCCTTCCAGGTCCCAACATGCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR TCA 72 bp | TATCACTCAAAGCTGCAGGAACCACCTGTTACACCCTaGGAAGTGTGTGAACATACGACTTTAAGCCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: YHSKLQEPPVTP*EVCEHTTLSPL Trigger: TAGTGGGCTTAAAGTCGTATGTTCACACACTTCTCAGGGTGTAACAGGTGGTTCCTGCAGCTTTGAGTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR GCA 72 bp | TTATTGGTGAGGATTCATCTGAAATGCATCTCACTGTaGTGTTCCTACTGCACGTGCACACATCCATCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLVRIHLKCISL*CSYCTCTHPSE Trigger: TTCCGATGGATGTGTGCACGTGCAGTAGGAACAGCACAGTGAGATGCATTTCAGATGAATCCTCACCAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR TCA 72 bp | GAACCCAAGAGAAGGGACTCTTTCTGGATACTGCAATaGAAAGCCACACCTTTCTCATCAGGTACTACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: EPKRRDSFWILQ*KATPFSSGTTS Trigger: ACTTGTAGTACCTGATGAGAAAGGTGTGGCTTTTCATTGCAGTATCCAGAAAGAGTCCCTTCTCTTGGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR GCA 72 bp | AAGAGAACATCCAACCAGTCCACACTAACTCTGTGCTaGCATCTAAGTTCGTCTATAGAGTCTCAGAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: KRTSNQSTLTLC*HLSSSIESQNC Trigger: GCAATTCTGAGACTCTATAGACGAACTTAGATGGCAGCACAGAGTTAGTGTGGACTGGTTGGATGTTCTCTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR GCA 72 bp | CAGGGCTCTGTTTTTGAGAAATCTCTATCTTCTCTCTaGCACTCAGTTATCAGACAGGGTCCACTACTTATG | + |
|
Preference number: 3 (lower is better) Translates to: QGSVFEKSLSSL*HSVIRQGPLLM Trigger: CATAAGTAGTGGACCCTGTCTGATAACTGAGTGGCAGAGAGAAGATAGAGATTTCTCAAAAACAGAGCCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR GCA 72 bp | CTAAAGAGAACATCCAACCAGTCCACACTAACTCTGTaGTGCCATCTAAGTTCGTCTATAGAGTCTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LKRTSNQSTLTL*CHLSSSIESQN Trigger: ATTCTGAGACTCTATAGACGAACTTAGATGGCAGCACAGAGTTAGTGTGGACTGGTTGGATGTTCTCTTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR GCA 72 bp | ATTCATCTGAAATGCATCTCACTGTGCTGTTCCTACTaGACGTGCACACATCCATCGGAAAACATTATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: IHLKCISLCCSY*TCTHPSENIME Trigger: TTCCATAATGTTTTCCGATGGATGTGTGCACGTGCAGTAGGAACAGCACAGTGAGATGCATTTCAGATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGACTAAAGGAGAGTGCTGAAGTACCTTTAATTGGAGGTACAGGTAGTTCTTCCACATTTCTCTTCTaGCTGCTTGGGATAACCATC | + |
|
Preference number: 3 (lower is better) Translates to: QRLKESAEVPLIGGTGSSSTFLF*LLGITI Trigger: GATGGTTATCCCAAGCAGCAAGAAGAGAAATGTGGA...AGAACTACCTGTACCTCCAATTAAAGGTACTTCAGCACTCTCCTTTAGTCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR TCA 72 bp | TTAGGTTCCAAGAATGCTGGGCAAAGTCTTATTTGTTaGAACAATGGAAAAGACCACCTTCCCATTCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LGSKNAGQSLIC*NNGKDHLPILV Trigger: GACAAGAATGGGAAGGTGGTCTTTTCCATTGTTTCAACAAATAAGACTTTGCCCAGCATTCTTGGAACCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR TCA 72 bp | ATGAACAATGTACAGCTATTGAGAATAAGAGTCTCATaGACACTGCCGAGTGAAAGCCAAGGAACGTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: MNNVQLLRIRVS*TLPSESQGTYF Trigger: AAAATACGTTCCTTGGCTTTCACTCGGCAGTGTTCATGAGACTCTTATTCTCAATAGCTGTACATTGTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| CDS-3UTR GCA 90 bp | CACACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATCACAGCACTGGGGAGAGCATCGTATCCGCCTaGACCTGGGACTCAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTSQHWGGQLLTHHSTGESIVSA*TWDSKE Trigger: CTCCTTTGAGTCCCAGGTGCAGGCGGATACGATGCT...CTCCCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR GCA 90 bp | CACACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATCACAGCACTGGGGAGCCTTCCTCCAGCTTCTaGAACTTCTGCGGTACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTSQHWGGQLLTHHSTGEPSSSF*NFCGTS Trigger: TGAGGTACCGCAGAAGTTGCAGAAGCTGGAGGAAGG...CTCCCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR CCA 90 bp | ATTCACACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATCACAGCACTGGGGGGCTCATTACCACCTaGAGGGGACTCTGGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IHTSQHWGGQLLTHHSTGGLITT*RGLWVR Trigger: TCTGACCCAGAGTCCCCTCCAGGTGGTAATGAGCCC...CCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTGAAT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR TCA 90 bp | GTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAGCTGCTCTGACATGCCTTGGTACCTCATCGTCCTaGGGCTGCAGTTTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSCSHITALGRSAALTCLGTSSS*GCSFLL Trigger: CAAGAGAAAACTGCAGCCTCAGGACGATGAGGTACC...AAGGCATGTCAGAGCAGCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR TCA 90 bp | ATTCACACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATCACAGCACTGGGGGTACCTCATCGTCCTaGGGCTGCAGTTTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHTSQHWGGQLLTHHSTGGTSSS*GCSFLL Trigger: CAAGAGAAAACTGCAGCCTCAGGACGATGAGGTACC...CCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR GCA 90 bp | CACACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATCACAGCACTGGGGAGCACCTCTTTCCAGTTTaGTTCTCTTTGCCGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTSQHWGGQLLTHHSTGEHLFPV*FSLPNL Trigger: GAGGTTCGGCAAAGAGAAGCAAACTGGAAAGAGGTG...CTCCCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR GCA 90 bp | ACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATCACAGCACTGGGGAGGTCTTTAGAGTTCTCATGTaGAGGGTATTGCTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSQHWGGQLLTHHSTGEVFRVLM*RVLLQG Trigger: GCCCTGGAGCAATACCCTGCACATGAGAACTCTAAA...GACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR CCA 90 bp | GTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAGCTGCTCTGACATGCCTTTGGAGGAGTATTTTCTaGAAGCCTCTGCCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSCSHITALGRSAALTCLWRSIF*KPLPRG Trigger: GCCTCTGGGCAGAGGCTTCCAGAAAATACTCCTCCA...AAGGCATGTCAGAGCAGCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR GCA 90 bp | ACAAACAGCTGTCAAATGTTTCTGAGATGGTCTGCTCCACCTGGGAGGATGGAGTTTTCTGGAAGCCTCTaGCCAGAGGCAGCAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TNSCQMFLRWSAPPGRMEFSGSL*PEAAAG Trigger: GCCCGCTGCTGCCTCTGGGCAGAGGCTTCCAGAAAA...CTCCATCCTCCCAGGTGGAGCAGACCATCTCAGAAACATTTGACAGCTGTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR CCA 90 bp | ACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAGAGGTAACCTCACTTaGCTCTTCTTCAGGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSQHWGGQLLTHHSTGEVRGNLT*LFFRYS Trigger: AGAGTACCTGAAGAAGAGCCAAGTGAGGTTACCTCT...GACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| 3UTR CAA 72 bp | GGCACTGAAGTGGTGTGTGAGCCAGCTCTGACAGGCTaGCAGCTCTCTGTACAGGTTAGGTTACCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTEVVCEPALTG*QLSVQVRLPEG Trigger: TCCTTCTGGTAACCTAACCTGTACAGAGAGCTGCAAGCCTGTCAGAGCTGGCTCACACACCACTTCAGTGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| CDS-3UTR GCA 90 bp | CTCTGTAAACACATTCACACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATCTTCAGGTACTCTGCTaGATGCGTGTAGTCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCKHIHTSQHWGGQLLTHLQVLC*MRVVTH Trigger: GTGGGTGACTACACGCATGCAGCAGAGTACCTGAAG...ATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTGAATGTGTTTACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTAAAGGAGAGTGCTGAAGTACCTTTAATTGGAGGTACAGGTAGTTCTGTGGGCAGCCACGGCTaGGCTGTGTCCTTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRLKESAEVPLIGGTGSSVGSHG*AVSFLQ Trigger: CTGGAGGAAGGACACAGCTCAGCCGTGGCTGCCCAC...AGAACTACCTGTACCTCCAATTAAAGGTACTTCAGCACTCTCCTTTAGTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| CDS-3UTR GCA 90 bp | AGTGTTGTGAGACGGGCAGGAGCTGCATGTTGGGACCTGGAAGGATACAGCATTCACCTCTTTCCAGTTTaGTTCTCTTTGCCGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVVRRAGAACWDLEGYSIHLFPV*FSLPNL Trigger: GAGGTTCGGCAAAGAGAAGCAAACTGGAAAGAGGTG...AATGCTGTATCCTTCCAGGTCCCAACATGCAGCTCCTGCCCGTCTCACAACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGCCACGCCGACTACTACACCATTAACGTCTCAACAGTTAATGTCTGAAGGGCTCATTACCACCTaGAGGGGACTCTGGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAATPTTTPLTSQQLMSEGLITT*RGLWVR Trigger: TCTGACCCAGAGTCCCCTCCAGGTGGTAATGAGCCC...TTCAGACATTAACTGTTGAGACGTTAATGGTGTAGTAGTCGGCGTGGCTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| CDS-3UTR TCA 90 bp | GGTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAGCTGCTCTGACATGCCTGCTTTTCCTCTAAGATaGTTTCAACATCAAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQLLTHHSTGEVSCSDMPAFPLR*FQHQVS Trigger: GGAAACTTGATGTTGAAATCATCTTAGAGGAAAAGC...AGGCATGTCAGAGCAGCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR GCA 90 bp | TGCACATTATATGTATGTACTATGCACATGCCTGGTGCCCAGGGAGGCCAAAAGCTTCAGGTACTCTGCTaGATGCGTGTAGTCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CTLYVCTMHMPGAQGGQKLQVLC*MRVVTH Trigger: GTGGGTGACTACACGCATGCAGCAGAGTACCTGAAG...CTTTTGGCCTCCCTGGGCACCAGGCATGTGCATAGTACATACATATAATGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| CDS-3UTR CCA 90 bp | TCTAGCGACTGTCAAATCAGCTCTGTAAACACATTCACACATCCCAGCACTGGGTGGAGGAGTATTTTCTaGAAGCCTCTGCCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSDCQISSVNTFTHPSTGWRSIF*KPLPRG Trigger: GCCTCTGGGCAGAGGCTTCCAGAAAATACTCCTCCA...CCCAGTGCTGGGATGTGTGAATGTGTTTACAGAGCTGATTTGACAGTCGCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| 3UTR CAA 72 bp | CTCAGGGAAGGGCCCAAGACCTCCACATTTCTCTTCTaGCTGCTTGGGATAACCATCAATTATTCCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LREGPKTSTFLF*LLGITINYSTL Trigger: AAGGGTGGAATAATTGATGGTTATCCCAAGCAGCAAGAAGAGAAATGTGGAGGTCTTGGGCCCTTCCCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR CAA 72 bp | ACAAGTCCATGTTCTAGGTCCTACTGCTGTGCAGCTTaGTCCCCAAGCCAACTACCTCTAGTTCAAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSPCSRSYCCAA*SPSQLPLVQVV Trigger: CACAACTTGAACTAGAGGTAGTTGGCTTGGGGACAAAGCTGCACAGCAGTAGGACCTAGAACATGGACTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| CDS-3UTR GCA 90 bp | ATCCCTATGTACACACATTATGCTAACCTGTCACAGACAGTAAGTGTCAAATTCTTTTCTGGAAGCCTCTaGCCAGAGGCAGCAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IPMYTHYANLSQTVSVKFFSGSL*PEAAAG Trigger: GCCCGCTGCTGCCTCTGGGCAGAGGCTTCCAGAAAA...GAATTTGACACTTACTGTCTGTGACAGGTTAGCATAATGTGTGTACATAGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR GCA 90 bp | TGCACATTATATGTATGTACTATGCACATGCCTGGTGCCCAGGGAGGCCAAAAGTTTAGAGTTCTCATGTaGAGGGTATTGCTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTLYVCTMHMPGAQGGQKFRVLM*RVLLQG Trigger: GCCCTGGAGCAATACCCTGCACATGAGAACTCTAAA...CTTTTGGCCTCCCTGGGCACCAGGCATGTGCATAGTACATACATATAATGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| CDS-3UTR CCA 90 bp | GTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAGCTGCTCTGACATGCCTTTTTCCTTTTCTTGGATaGAGAATCTTGCACATAACT | + |
|
Preference number: 4 (lower is better) Translates to: VSCSHITALGRSAALTCLFPFLG*RILHIT Trigger: AGTTATGTGCAAGATTCTCCATCCAAGAAAAGGAAA...AAGGCATGTCAGAGCAGCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR TCA 90 bp | TCTAGCGACTGTCAAATCAGCTCTGTAAACACATTCACACATCCCAGCACTGGGCCAGGTCCAAAACAGTaGTGTCACGGGTTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSDCQISSVNTFTHPSTGPGPKQ*CHGFFF Trigger: AAAGAAAAACCCGTGACATCACTGTTTTGGACCTGG...CCCAGTGCTGGGATGTGTGAATGTGTTTACAGAGCTGATTTGACAGTCGCTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR GCA 90 bp | ACAGACAGTAAGTGTCAAATTCATACACTGAAGTTTGTGGCAGCATCCTACACAAGCATCGTATCCGCCTaGACCTGGGACTCAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDSKCQIHTLKFVAASYTSIVSA*TWDSKE Trigger: CTCCTTTGAGTCCCAGGTGCAGGCGGATACGATGCT...TGTGTAGGATGCTGCCACAAACTTCAGTGTATGAATTTGACACTTACTGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR CCA 90 bp | ACAAACAGCTGTCAAATGTTTCTGAGATGGTCTGCTCCACCTGGGAGGATGGAGATCTACTTGCTGGCATaGAGGAGTATTTTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TNSCQMFLRWSAPPGRMEIYLLA*RSIFWK Trigger: CTTCCAGAAAATACTCCTCCATGCCAGCAAGTAGAT...CTCCATCCTCCCAGGTGGAGCAGACCATCTCAGAAACATTTGACAGCTGTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR CCA 90 bp | TGCACATTATATGTATGTACTATGCACATGCCTGGTGCCCAGGGAGGCCAAAAGAGAGGTAACCTCACTTaGCTCTTCTTCAGGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CTLYVCTMHMPGAQGGQKRGNLT*LFFRYS Trigger: AGAGTACCTGAAGAAGAGCCAAGTGAGGTTACCTCT...CTTTTGGCCTCCCTGGGCACCAGGCATGTGCATAGTACATACATATAATGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| CDS-3UTR CCA 90 bp | TCTAGCGACTGTCAAATCAGCTCTGTAAACACATTCACACATCCCAGCACTGGGAGTTTTCTCTTGGTCTaGTTAAGCCTACCAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSDCQISSVNTFTHPSTGSFLLV*LSLPRE Trigger: TTCCCTTGGTAGGCTTAACCAGACCAAGAGAAAACT...CCCAGTGCTGGGATGTGTGAATGTGTTTACAGAGCTGATTTGACAGTCGCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR GCA 90 bp | ACTCTTAACCTGAGATCTCTGTCTCCAGCCCCTGATCTTCATTTGGAAACAACCTCTGCACTAAAAATATaGTCATTATCGCGACGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TLNLRSLSPAPDLHLETTSALKI*SLSRRH Trigger: ATGTCGTCGCGATAATGAGCATATTTTTAGTGCAGA...GGTTGTTTCCAAATGAAGATCAGGGGCTGGAGACAGAGATCTCAGGTTAAGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| CDS-3UTR CCA 90 bp | TCTAGCGACTGTCAAATCAGCTCTGTAAACACATTCACACATCCCAGCACTGGGTTTCCTTTTCTTGGATaGAGAATCTTGCACATAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSDCQISSVNTFTHPSTGFPFLG*RILHIT Trigger: AGTTATGTGCAAGATTCTCCATCCAAGAAAAGGAAA...CCCAGTGCTGGGATGTGTGAATGTGTTTACAGAGCTGATTTGACAGTCGCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| 3UTR CAA 72 bp | CTTGCTGCTTGGGATAACCATCAATTATTCCACCCTTaGAAGAATTCTTCTCTCCTAAAAATGACCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAAWDNHQLFHP*KNSSLLKMTHG Trigger: CCCATGGGTCATTTTTAGGAGAGAAGAATTCTTCAAAGGGTGGAATAATTGATGGTTATCCCAAGCAGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR CAA 72 bp | TTTGTTGAAACAATGGAAAAGACCACCTTCCCATTCTaGTCCTCAAGAATCCATCCTGAGTCACTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FVETMEKTTFPF*SSRIHPESLNF Trigger: GAAGTTCAGTGACTCAGGATGGATTCTTGAGGACAAGAATGGGAAGGTGGTCTTTTCCATTGTTTCAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| 3UTR CAA 72 bp | CCACTACAGAGTAGAAGTTTCAACAGGGCTCTGTTTTaGAGAAATCTCTATCTTCTCTCTGCCACTCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PLQSRSFNRALF*RNLYLLSATQL Trigger: TAACTGAGTGGCAGAGAGAAGATAGAGATTTCTCAAAAACAGAGCCCTGTTGAAACTTCTACTCTGTAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
||
| CDS-3UTR TCA 90 bp | ATCCCTATGTACACACATTATGCTAACCTGTCACAGACAGTAAGTGTCAAATTCCCAGGTCCAAAACAGTaGTGTCACGGGTTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IPMYTHYANLSQTVSVKFPGPKQ*CHGFFF Trigger: AAAGAAAAACCCGTGACATCACTGTTTTGGACCTGG...GAATTTGACACTTACTGTCTGTGACAGGTTAGCATAATGTGTGTACATAGGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTAAAGGAGAGTGCTGAAGTACCTTTAATTGGAGGTACAGGTAGTTCTAGTTTTCTCTTGGTCTaGTTAAGCCTACCAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRLKESAEVPLIGGTGSSSFLLV*LSLPRE Trigger: TTCCCTTGGTAGGCTTAACCAGACCAAGAGAAAACT...AGAACTACCTGTACCTCCAATTAAAGGTACTTCAGCACTCTCCTTTAGTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| CDS-3UTR CCA 90 bp | ACTCTTAACCTGAGATCTCTGTCTCCAGCCCCTGATCTTCATTTGGAAACAACCATCAAAGTACATTTCTaGGTCACGGAATTTTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: TLNLRSLSPAPDLHLETTIKVHF*VTEFFN Trigger: GTTGAAAAATTCCGTGACCCAGAAATGTACTTTGAT...GGTTGTTTCCAAATGAAGATCAGGGGCTGGAGACAGAGATCTCAGGTTAAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| CDS-3UTR TCA 90 bp | CCCCCGCACCAGAACCAAATCTACCCTCTAAATACTAAGAACAGTGACTATATAGCTTTTCCTCTAAGATaGTTTCAACATCAAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PPHQNQIYPLNTKNSDYIAFPLR*FQHQVS Trigger: GGAAACTTGATGTTGAAATCATCTTAGAGGAAAAGC...TATATAGTCACTGTTCTTAGTATTTAGAGGGTAGATTTGGTTCTGGTGCGGGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| 3UTR CAA 72 bp | ACATTTAGGTTCCAAGAATGCTGGGCAAAGTCTTATTaGTTGAAACAATGGAAAAGACCACCTTCCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: TFRFQECWAKSY*LKQWKRPPSHS Trigger: AGAATGGGAAGGTGGTCTTTTCCATTGTTTCAACAAATAAGACTTTGCCCAGCATTCTTGGAACCTAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| CDS-3UTR GCA 90 bp | ATCCCTATGTACACACATTATGCTAACCTGTCACAGACAGTAAGTGTCAAATTCTCTGCACTAAAAATATaGTCATTATCGCGACGACAT | + |
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Preference number: 4 (lower is better) Translates to: IPMYTHYANLSQTVSVKFSALKI*SLSRRH Trigger: ATGTCGTCGCGATAATGAGCATATTTTTAGTGCAGA...GAATTTGACACTTACTGTCTGTGACAGGTTAGCATAATGTGTGTACATAGGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| CDS-3UTR CCA 90 bp | ACAGACAGTAAGTGTCAAATTCATACACTGAAGTTTGTGGCAGCATCCTACACAATCAAAGTACATTTCTaGGTCACGGAATTTTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: TDSKCQIHTLKFVAASYTIKVHF*VTEFFN Trigger: GTTGAAAAATTCCGTGACCCAGAAATGTACTTTGAT...TGTGTAGGATGCTGCCACAAACTTCAGTGTATGAATTTGACACTTACTGTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| CDS TCA 90 bp | CGCCAGGCCAACTTCCTGAAGCTCATTATAGTGGGCAGCCACGGCTaGGCTGTGTCCTTCCTCCAGCTTCTGCAACTTCTGCGGTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: RQANFLKLIIVGSHG*AVSFLQLLQLLRYL Trigger: GAGGTACCGCAGAAGTTGCAGAAGCTGGAGGAAGGACACAGCTCAGCCGTGGCTGCCCACTATAATGAGCTTCAGGAAGTTGGCCTGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS CCA 90 bp | CTGCATTTTTGGCTGATCTACTTGCTGGCATGGAGGAGTATTTTCTaGAAGCCTCTGCCCAGAGGCAGCAGCGGGCTCATTACCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: LHFWLIYLLAWRSIF*KPLPRGSSGLITTW Trigger: CCAGGTGGTAATGAGCCCGCTGCTGCCTCTGGGCAGAGGCTTCCAGAAAATACTCCTCCATGCCAGCAAGTAGATCAGCCAAAAATGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000129849.2 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS TCA 90 bp | TGTCCTTCCTCCAGCTTCTGCAACTTCTGCGGTACCTCATCGTCCTaGGGCTGCAGTTTTCTCTTGGTCTGGTTAAGCCTACCAAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CPSSSFCNFCGTSSS*GCSFLLVWLSLPRE Trigger: TTCCCTTGGTAGGCTTAACCAGACCAAGAGAAAACTGCAGCCTCAGGACGATGAGGTACCGCAGAAGTTGCAGAAGCTGGAGGAAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS-3UTR CAA 90 bp | CCCATCCACCCACAACCCACAACCCCCGCACCAGAACCAAATCTACCCTCTAAAACTCCTTCTGCATTTTaGGCTGATCTACTTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PIHPQPTTPAPEPNLPSKTPSAF*ADLLAG Trigger: GCCAGCAAGTAGATCAGCCAAAAATGCAGAAGGAGT...TTTAGAGGGTAGATTTGGTTCTGGTGCGGGGGTTGTGGGTTGTGGGTGGATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| CDS-3UTR CAA 90 bp | AGTGTTGTGAGACGGGCAGGAGCTGCATGTTGGGACCTGGAAGGATACAGCATTCTCCCCTTCCTCCACTaGAGCAAATCTCCACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVVRRAGAACWDLEGYSILPFLH*SKSPPF Trigger: AAAAGGTGGAGATTTGCTCAAGTGGAGGAAGGGGAG...AATGCTGTATCCTTCCAGGTCCCAACATGCAGCTCCTGCCCGTCTCACAACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| CDS-3UTR CAA 90 bp | CTCTGTAAACACATTCACACATCCCAGCACTGGGGAGGTCAGCTGCTCACACATGGCTGCAGTTTTCTCTaGGTCTGGTTAAGCCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: LCKHIHTSQHWGGQLLTHGCSFL*VWLSLP Trigger: TGGTAGGCTTAACCAGACCAAGAGAAAACTGCAGCC...ATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTGTGAATGTGTTTACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| CDS-3UTR CAA 90 bp | GGTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAGCTGCTCTGACATGCCTATCAGTTCAAAGCTATaGGGAGTGGTGCCAATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GQLLTHHSTGEVSCSDMPISSKL*GVVPIK Trigger: TTTTATTGGCACCACTCCCAATAGCTTTGAACTGAT...AGGCATGTCAGAGCAGCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| CDS-3UTR CAA 90 bp | GTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAGCTGCTCTGACATGCCTTTCAAGTTTCCTTTTCTaGGATGGAGAATCTTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: VSCSHITALGRSAALTCLSSFLF*DGESCT Trigger: TGTGCAAGATTCTCCATCCAAGAAAAGGAAACTTGA...AAGGCATGTCAGAGCAGCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| CDS-3UTR CAA 90 bp | GGTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAGCTGCTCTGACATGCCTGTAACGCTGTTGACATaGTTTCATAGAAATATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQLLTHHSTGEVSCSDMPVTLLT*FHRNIS Trigger: GCTGATATTTCTATGAAACAATGTCAACAGCGTTAC...AGGCATGTCAGAGCAGCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| CDS-3UTR CAA 90 bp | GTCAGCTGCTCACACATCACAGCACTGGGGAGGTCAGCTGCTCTGACATGCCTTATCAGTTCAAAGCTATaGGGAGTGGTGCCAATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSCSHITALGRSAALTCLISSKL*GVVPIK Trigger: TTTTATTGGCACCACTCCCAATAGCTTTGAACTGAT...AAGGCATGTCAGAGCAGCTGACCTCCCCAGTGCTGTGATGTGTGAGCAGCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| CDS GCA 90 bp | TACCAAGGGAAGGCTCATCTTCCGACACATCACCTCTTTCCAGTTTaGTTCTCTTTGCCGAACCTCCATCATCCTCAGAGTGCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YQGKAHLPTHHLFPV*FSLPNLHHPQSAFP Trigger: AGGAAAAGCACTCTGAGGATGATGGAGGTTCGGCAAAGAGAAGCAAACTGGAAAGAGGTGATGTGTCGGAAGATGAGCCTTCCCTTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000129849.2 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS-3UTR CAA 90 bp | AGTGTTGTGAGACGGGCAGGAGCTGCATGTTGGGACCTGGAAGGATACAGCATTGTCTTCGTAACGCTGTaGACATTGTTTCATAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: SVVRRAGAACWDLEGYSIVFVTL*TLFHRN Trigger: ATTTCTATGAAACAATGTCAACAGCGTTACGAAGAC...AATGCTGTATCCTTCCAGGTCCCAACATGCAGCTCCTGCCCGTCTCACAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009679.11 |
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| CDS-3UTR CAA 90 bp | ATCCCTATGTACACACATTATGCTAACCTGTCACAGACAGTAAGTGTCAAATTCACTCCTTCTGCATTTTaGGCTGATCTACTTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IPMYTHYANLSQTVSVKFTPSAF*ADLLAG Trigger: GCCAGCAAGTAGATCAGCCAAAAATGCAGAAGGAGT...GAATTTGACACTTACTGTCTGTGACAGGTTAGCATAATGTGTGTACATAGGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| CDS GCA 90 bp | CTTTCCAGTTTGCTTCTCTTTGCCGAACCTCCATCATCCTCAGAGTaGTTTTCCTCTAAGATGATTTCAACATCAAGTTTCCTTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSLLLFAEPPSSSE*FSSKMISTSSFLFL Trigger: CAAGAAAAGGAAACTTGATGTTGAAATCATCTTAGAGGAAAAGCACTCTGAGGATGATGGAGGTTCGGCAAAGAGAAGCAAACTGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000129849.2 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS-3UTR CAA 90 bp | ACAGACAGTAAGTGTCAAATTCATACACTGAAGTTTGTGGCAGCATCCTACACAGTAACGCTGTTGACATaGTTTCATAGAAATATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TDSKCQIHTLKFVAASYTVTLLT*FHRNIS Trigger: GCTGATATTTCTATGAAACAATGTCAACAGCGTTAC...TGTGTAGGATGCTGCCACAAACTTCAGTGTATGAATTTGACACTTACTGTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| CDS-3UTR CAA 90 bp | ATCCCTATGTACACACATTATGCTAACCTGTCACAGACAGTAAGTGTCAAATTCGTCTTCGTAACGCTGTaGACATTGTTTCATAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: IPMYTHYANLSQTVSVKFVFVTL*TLFHRN Trigger: ATTTCTATGAAACAATGTCAACAGCGTTACGAAGAC...GAATTTGACACTTACTGTCTGTGACAGGTTAGCATAATGTGTGTACATAGGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| CDS TCA 72 bp | TCCAGCTTCTGCAACTTCTGCGGTACCTCATCGTCCTaGGGCTGCAGTTTTCTCTTGGTCTGGTTAAGCCTA | + |
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Preference number: 6 (lower is better) Translates to: SSFCNFCGTSSS*GCSFLLVWLSL Trigger: TAGGCTTAACCAGACCAAGAGAAAACTGCAGCCTCAGGACGATGAGGTACCGCAGAAGTTGCAGAAGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS CCA 72 bp | CTCCTTCTGCATTTTTGGCTGATCTACTTGCTGGCATaGAGGAGTATTTTCTGGAAGCCTCTGCCCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LLLHFWLIYLLA*RSIFWKPLPRG Trigger: GCCTCTGGGCAGAGGCTTCCAGAAAATACTCCTCCATGCCAGCAAGTAGATCAGCCAAAAATGCAGAAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000129849.2 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS CAA 90 bp | CTACCAAGGGAAGGCTCATCTTCCGACACATCACCTCTTTCCAGTTaGCTTCTCTTTGCCGAACCTCCATCATCCTCAGAGTGCTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPREGSSSDTSPLSS*LLFAEPPSSSECFS Trigger: GGAAAAGCACTCTGAGGATGATGGAGGTTCGGCAAAGAGAAGCAAACTGGAAAGAGGTGATGTGTCGGAAGATGAGCCTTCCCTTGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000129849.2 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS GCA 72 bp | TTCCGACACATCACCTCTTTCCAGTTTGCTTCTCTTTaGCGAACCTCCATCATCCTCAGAGTGCTTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FRHITSFQFASL*RTSIILRVLFL Trigger: GAGGAAAAGCACTCTGAGGATGATGGAGGTTCGGCAAAGAGAAGCAAACTGGAAAGAGGTGATGTGTCGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000129849.2 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS GCA 72 bp | AAGGCTCATCTTCCGACACATCACCTCTTTCCAGTTTaGTTCTCTTTGCCGAACCTCCATCATCCTCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: KAHLPTHHLFPV*FSLPNLHHPQS Trigger: ACTCTGAGGATGATGGAGGTTCGGCAAAGAGAAGCAAACTGGAAAGAGGTGATGTGTCGGAAGATGAGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000129849.2 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS CAA 72 bp | CTTCCGACACATCACCTCTTTCCAGTTTGCTTCTCTTaGCCGAACCTCCATCATCCTCAGAGTGCTTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPTHHLFPVCFS*PNLHHPQSAFP Trigger: AGGAAAAGCACTCTGAGGATGATGGAGGTTCGGCAAAGAGAAGCAAACTGGAAAGAGGTGATGTGTCGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000129849.2 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS GCA 72 bp | TCAGAGGCAAGTTTAGAGTTCTCATGTGCAGGGTATTaGTCCAGGGCCTGCATTCGTTTTAAGAGCATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SEASLEFSCAGY*SRACIRFKSIL Trigger: CAAAATGCTCTTAAAACGAATGCAGGCCCTGGAGCAATACCCTGCACATGAGAACTCTAAACTTGCCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 |
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| CDS CAA 72 bp | GCTCTACAAGATCCTCCCCAAACTCCTTCTGCATTTTaGGCTGATCTACTTGCTGGCATGGAGGAGTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: ALQDPPQTPSAF*ADLLAGMEEYF Trigger: AAAATACTCCTCCATGCCAGCAAGTAGATCAGCCAAAAATGCAGAAGGAGTTTGGGGAGGATCTTGTAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000129849.2 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS CAA 72 bp | GCGACGACATCTCATGTCTTCGTAACGCTGTTGACATaGTTTCATAGAAATATCAGCGATATCAGCACACAC | + |
|
Preference number: 6 (lower is better) Translates to: ATTSHVFVTLLT*FHRNISDISTH Trigger: GTGTGTGCTGATATCGCTGATATTTCTATGAAACAATGTCAACAGCGTTACGAAGACATGAGATGTCGTCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000139111.2 |
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| CDS CAA 72 bp | TTTCTTGGATGGAGAATCTTGCACATAACTCGAATTTaGCTCTACAAGATCCTCCCCAAACTCCTTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FLGWRILHITRI*LYKILPKLLLH Trigger: ATGCAGAAGGAGTTTGGGGAGGATCTTGTAGAGCAAAATTCGAGTTATGTGCAAGATTCTCCATCCAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000129849.2 ENSMUST00000131075.8 ENSMUST00000139111.2 |
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| CDS CAA 72 bp | ATTATCGCGACGACATCTCATGTCTTCGTAACGCTGTaGACATTGTTTCATAGAAATATCAGCGATATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IIATTSHVFVTL*TLFHRNISDIS Trigger: GCTGATATCGCTGATATTTCTATGAAACAATGTCAACAGCGTTACGAAGACATGAGATGTCGTCGCGATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009679.11 ENSMUST00000025427.14 ENSMUST00000139111.2 |
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