Pregenerated sensors for RNGTT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028274Ensembl transcript IDs: ENSMUST00000029942.8, ENSMUST00000108153.9
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGGTGCAGCAGGAGCAGTGGGAGCAACATCTTCACGTCCTCCATaGCCAGTCTCAGCAACGCCTCTGCATCTGTCCATGGGAGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: AGAAGAVGATSSRPP*PVSATPLHLSMGGQ Trigger: CTGGCCTCCCATGGACAGATGCAGAGGCGTTGCTGAGACTGGTCATGGAGGACGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR GCA 90 bp | ACGCTGAGGTGCAGCTCAGGATCGGAAACCACCTCCAAGCGCAGGTaGAGCAGGAGCAGTGGGAGCAACATCTTCACGTCCTCCATGACC | + |
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Preference number: 1 (lower is better) Translates to: TLRCSSGSETTSKRR*SRSSGSNIFTSSMT Trigger: GGTCATGGAGGACGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTCCGATCCTGAGCTGCACCTCAGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR CCA 90 bp | CTCAGGATCGGAAACCACCTCCAAGCGCAGGTGCAGCAGGAGCAGTaGGAGCAACATCTTCACGTCCTCCATGACCAGTCTCAGCAACGC | + |
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Preference number: 1 (lower is better) Translates to: LRIGNHLQAQVQQEQ*EQHLHVLHDQSQQR Trigger: GCGTTGCTGAGACTGGTCATGGAGGACGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTCCGATCCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR CCA 90 bp | CACAACGCGGTTGTGCTTGCTGCTGTTCCCAGGGATCACAGTGAGTaGGTAAAGCAGGAGGAGCCCTGCTGTCTGAAAGCAGCAACGCTC | + |
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Preference number: 1 (lower is better) Translates to: HNAVVLAAVPRDHSE*VKQEEPCCLKAATL Trigger: GAGCGTTGCTGCTTTCAGACAGCAGGGCTCCTCCTGCTTTACCCACTCACTGTGATCCCTGGGAACAGCAGCAAGCACAACCGCGTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR TCA 90 bp | ATAACACAACGCGGTTGTGCTTGCTGCTGTTCCCAGGGATCACAGTaGGTGGGTAAAGCAGGAGGAGCCCTGCTGTCTGAAAGCAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: ITQRGCACCCSQGSQ*VGKAGGALLSESSN Trigger: GTTGCTGCTTTCAGACAGCAGGGCTCCTCCTGCTTTACCCACTCACTGTGATCCCTGGGAACAGCAGCAAGCACAACCGCGTTGTGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR GCA 90 bp | ACAGCAGCACATGAAGGTAAGTGCCACAAAGGAACTCAAAACCACTaGCAGGATGGGAACCCCAGACATCTGACGTCATGGTTCAAACAC | + |
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Preference number: 1 (lower is better) Translates to: TAAHEGKCHKGTQNH*QDGNPRHLTSWFKH Trigger: GTGTTTGAACCATGACGTCAGATGTCTGGGGTTCCCATCCTGGCAGTGGTTTTGAGTTCCTTTGTGGCACTTACCTTCATGTGCTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR CCA 90 bp | ATGGCTGTAAGGATACTCCAGGAGGTGATGCGGTTGGGGACTACATaGGGTCTGCTTTTAAGGCCAATGATTACGTCACCACAATTGAAA | + |
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Preference number: 1 (lower is better) Translates to: MAVRILQEVMRLGTT*GLLLRPMITSPQLK Trigger: TTTCAATTGTGGTGACGTAATCATTGGCCTTAAAAGCAGACCCCATGTAGTCCCCAACCGCATCACCTCCTGGAGTATCCTTACAGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR CCA 90 bp | CCTTCCCATGCGATAACTCAGGGAAACAGTCTTCTTAGTCCTGTCTaGAAAATATCAGCTAAAGAAAACAGCTGTTGTAACATAAGCCGA | + |
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Preference number: 1 (lower is better) Translates to: PSHAITQGNSLLSPV*KISAKENSCCNISR Trigger: TCGGCTTATGTTACAACAGCTGTTTTCTTTAGCTGATATTTTCCAGACAGGACTAAGAAGACTGTTTCCCTGAGTTATCGCATGGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR GCA 90 bp | GAAACCACCTCCAAGCGCAGGTGCAGCAGGAGCAGTGGGAGCAACATCTTCACGGCACATGAAGGTAAGTaGCACAAAGGAACTCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: ETTSKRRCSRSSGSNIFTAHEGK*HKGTQN Trigger: GTTTTGAGTTCCTTTGTGGCACTTACCTTCATGTGC...CGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTTCCCATGCGATAACTCAGGGAAACAGTCTTCTTAGTCCTGTCTGGAAATCTCAGCAACGCCTCTaGATCTGTCCATGGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: KPSHAITQGNSLLSPVWKSQQRL*ICPWEA Trigger: GGCCTCCCATGGACAGATGCAGAGGCGTTGCTGAGA...TTTCCAGACAGGACTAAGAAGACTGTTTCCCTGAGTTATCGCATGGGAAGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGCTGCCACTGTGTCTGAAGCACTGTTTGAGGGAAATAACACAACGCGGTTGAAACCACTGCCAGGATaGGAACCCCAGACATCTGAC | + |
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Preference number: 2 (lower is better) Translates to: KAATVSEALFEGNNTTRLKPLPG*EPQTSD Trigger: GTCAGATGTCTGGGGTTCCCATCCTGGCAGTGGTTT...CAACCGCGTTGTGTTATTTCCCTCAAACAGTGCTTCAGACACAGTGGCAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCCTTCCCATGCGATAACTCAGGGAAACAGTCTTCTTAGTCCTGTCTGGAAAGTGCAGCAGGAGCAGTaGGAGCAACATCTTCACGTC | + |
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Preference number: 2 (lower is better) Translates to: KPSHAITQGNSLLSPVWKVQQEQ*EQHLHV Trigger: GACGTGAAGATGTTGCTCCCACTGCTCCTGCTGCAC...TTTCCAGACAGGACTAAGAAGACTGTTTCCCTGAGTTATCGCATGGGAAGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTGTTGTAACATAAGCCGAGAAGGGAAGTTTTCCTTCAAGATGTCCAAATCCCGCGGTTGTGCTTGCTaGTGTTCCCAGGGATCACAG | + |
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Preference number: 2 (lower is better) Translates to: SCCNISREGKFSFKMSKSRGCAC*CSQGSQ Trigger: CTGTGATCCCTGGGAACAGCAGCAAGCACAACCGCG...GGATTTGGACATCTTGAAGGAAAACTTCCCTTCTCGGCTTATGTTACAACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTTGTAACATAAGCCGAGAAGGGAAGTTTTCCTTCAAGATGTCCAAATCCAGGGATCACAGTGAGTaGGTAAAGCAGGAGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SCCNISREGKFSFKMSKSRDHSE*VKQEEP Trigger: GGGCTCCTCCTGCTTTACCCACTCACTGTGATCCCT...GGATTTGGACATCTTGAAGGAAAACTTCCCTTCTCGGCTTATGTTACAACAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCAACAATCCTGTAACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTATCTTCACGTCCTCCATaGCCAGTCTCAGCAACGCCT | + |
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Preference number: 2 (lower is better) Translates to: PQQSCNSQVFKFLQCPNVSSRPP*PVSATP Trigger: AGGCGTTGCTGAGACTGGTCATGGAGGACGTGAAGA...TACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTTACAGGATTGTTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCAACAATCCTGTAACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTAAAGCAGGAGGAGCCCTaGTGTCTGAAAGCAGCAACG | + |
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Preference number: 2 (lower is better) Translates to: PQQSCNSQVFKFLQCPNVKQEEP*CLKAAT Trigger: CGTTGCTGCTTTCAGACAGCAGGGCTCCTCCTGCTT...TACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTTACAGGATTGTTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGCTGCCACTGTGTCTGAAGCACTGTTTGAGGGAAATAACACAACGCGGTTGCTCTGGTTGAGAAAATaGGACAACAGCATTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: KAATVSEALFEGNNTTRLLWLRK*DNSIFL Trigger: AAGAAAAATGCTGTTGTCTCATTTTCTCAACCAGAG...CAACCGCGTTGTGTTATTTCCCTCAAACAGTGCTTCAGACACAGTGGCAGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCACAAGCCAATCAGAACAAGTTTTACAACGGCAGGGACCTACTGTCCAGAAGAACTTCTTAAAATaGTATAGCCAGACCAAACTG | + |
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Preference number: 2 (lower is better) Translates to: SFTSQSEQVLQRQGPTVQKNFLK*YSQTKL Trigger: CAGTTTGGTCTGGCTATACCATTTTAAGAAGTTCTT...CTGGACAGTAGGTCCCTGCCGTTGTAAAACTTGTTCTGATTGGCTTGTGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCAACAATCCTGTAACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTAAAGCTGCTTGCTAGTTaGTATTCTGAATTCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: PQQSCNSQVFKFLQCPNVKLLAS*YSEFLH Trigger: GTGAAGGAATTCAGAATAGCAACTAGCAAGCAGCTT...TACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTTACAGGATTGTTGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCAACAATCCTGTAACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTACATACAGAAAAGCACTaGAGATGTAAAGTTCGTTTA | + |
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Preference number: 2 (lower is better) Translates to: PQQSCNSQVFKFLQCPNVHTEKH*RCKVRL Trigger: TAAACGAACTTTACATCTGCAGTGCTTTTCTGTATG...TACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTTACAGGATTGTTGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGCTCTGGTTGAGAAAATaGGACAACAGCATTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: MYCSSKETNVPNIYRLTMLWLRK*DNSIFL Trigger: AAGAAAAATGCTGTTGTCTCATTTTCTCAACCAGAG...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
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| 3UTR GCA 72 bp | TGCAGCTCAGGATCGGAAACCACCTCCAAGCGCAGGTaGAGCAGGAGCAGTGGGAGCAACATCTTCACGTCC | + |
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Preference number: 3 (lower is better) Translates to: CSSGSETTSKRR*SRSSGSNIFTS Trigger: GGACGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTCCGATCCTGAGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR TCA 72 bp | CGCGGTTGTGCTTGCTGCTGTTCCCAGGGATCACAGTaGGTGGGTAAAGCAGGAGGAGCCCTGCTGTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: RGCACCCSQGSQ*VGKAGGALLSE Trigger: TTCAGACAGCAGGGCTCCTCCTGCTTTACCCACTCACTGTGATCCCTGGGAACAGCAGCAAGCACAACCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR GCA 72 bp | AAAAGATTCAGTGACCCTGGGGAGCAGGCACTAGGCTaGCTGGAGTCCACAGGCAGTTCTGGATCCACCATG | + |
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Preference number: 3 (lower is better) Translates to: KRFSDPGEQALG*LESTGSSGSTM Trigger: CATGGTGGATCCAGAACTGCCTGTGGACTCCAGGCAGCCTAGTGCCTGCTCCCCAGGGTCACTGAATCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR GCA 72 bp | CAGCAACGCTCCCAGACAGCAGCACATGAAGGTAAGTaGCACAAAGGAACTCAAAACCACTGCCAGGATGGG | + |
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Preference number: 3 (lower is better) Translates to: QQRSQTAAHEGK*HKGTQNHCQDG Trigger: CCCATCCTGGCAGTGGTTTTGAGTTCCTTTGTGGCACTTACCTTCATGTGCTGCTGTCTGGGAGCGTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR GCA 72 bp | CATGAAGGTAAGTGCCACAAAGGAACTCAAAACCACTaGCAGGATGGGAACCCCAGACATCTGACGTCATGG | + |
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Preference number: 3 (lower is better) Translates to: HEGKCHKGTQNH*QDGNPRHLTSW Trigger: CCATGACGTCAGATGTCTGGGGTTCCCATCCTGGCAGTGGTTTTGAGTTCCTTTGTGGCACTTACCTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR CCA 72 bp | AGGATACTCCAGGAGGTGATGCGGTTGGGGACTACATaGGGTCTGCTTTTAAGGCCAATGATTACGTCACCA | + |
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Preference number: 3 (lower is better) Translates to: RILQEVMRLGTT*GLLLRPMITSP Trigger: TGGTGACGTAATCATTGGCCTTAAAAGCAGACCCCATGTAGTCCCCAACCGCATCACCTCCTGGAGTATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR-3UTR CAA 90 bp | AAGCCTTCCCATGCGATAACTCAGGGAAACAGTCTTCTTAGTCCTGTCTGGAAAACGACAGAAGGAACCTaGACAATCTCCCCTCAACAA | + |
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Preference number: 3 (lower is better) Translates to: KPSHAITQGNSLLSPVWKTTEGT*TISPQQ Trigger: TTGTTGAGGGGAGATTGTCAAGGTTCCTTCTGTCGT...TTTCCAGACAGGACTAAGAAGACTGTTTCCCTGAGTTATCGCATGGGAAGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR TCA 72 bp | GTTCTGGATCCACCATGTAAACGACAGAAGGAACCTTaGCAATCTCCCCTCAACAATCCTGTAACAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: VLDPPCKRQKEP*QSPLNNPVTVR Trigger: CCTGACTGTTACAGGATTGTTGAGGGGAGATTGTCAAGGTTCCTTCTGTCGTTTACATGGTGGATCCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR CCA 72 bp | GCGATAACTCAGGGAAACAGTCTTCTTAGTCCTGTCTaGAAAATATCAGCTAAAGAAAACAGCTGTTGTAAC | + |
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Preference number: 3 (lower is better) Translates to: AITQGNSLLSPV*KISAKENSCCN Trigger: GTTACAACAGCTGTTTTCTTTAGCTGATATTTTCCAGACAGGACTAAGAAGACTGTTTCCCTGAGTTATCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR TCA 72 bp | GTTCCAAGGAAACAAATGTACCAAATATATACAGGCTaGCTATGTCTTCCCTTAAAACACGTGTACCAGTAC | + |
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Preference number: 3 (lower is better) Translates to: VPRKQMYQIYTG*LCLPLKHVYQY Trigger: GTACTGGTACACGTGTTTTAAGGGAAGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
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| CDS-3UTR GCA 90 bp | CTACTGTCCAGAGTCAACGCTGAGGTGCAGCTCAGGATCGGAAACCACCTCCAACTGTCCCTGGGCGGCTaGTGCACATCTGTCAATGAA | + |
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Preference number: 4 (lower is better) Translates to: LLSRVNAEVQLRIGNHLQLSLGG*CTSVNE Trigger: TTCATTGACAGATGTGCAGCAGCCGCCCAGGGACAG...TTGGAGGTGGTTTCCGATCCTGAGCTGCACCTCAGCGTTGACTCTGGACAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR TCA 90 bp | AGCTGTTGTAACATAAGCCGAGAAGGGAAGTTTTCCTTCAAGATGTCCAAATCCCTTCCTGCCACCGGCTaGCCGCGCCGCGGACAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SCCNISREGKFSFKMSKSLPATG*PRRGQF Trigger: GAACTGTCCGCGGCGCGGTCAGCCGGTGGCAGGAAG...GGATTTGGACATCTTGAAGGAAAACTTCCCTTCTCGGCTTATGTTACAACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR TCA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGAGCGGTGGGGGCGGCATaGGCTCCGTGTCAGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: CTSTKPLVSLISLVEKMRAVGAA*APCQGP Trigger: TGGACCCTGACACGGAGCTCATGCCGCCCCCACCGC...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
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| CDS-3UTR TCA 90 bp | ATTACAACACACACTGACACAATCAGAGAAGGAATGTCCTGGCATTTCATGGAAGCGGTGGGGGCGGCATaGGCTCCGTGTCAGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ITTHTDTIREGMSWHFMEAVGAA*APCQGP Trigger: TGGACCCTGACACGGAGCTCATGCCGCCCCCACCGC...TTCCATGAAATGCCAGGACATTCCTTCTCTGATTGTGTCAGTGTGTGTTGTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR GCA 90 bp | GAAACCACCTCCAAGCGCAGGTGCAGCAGGAGCAGTGGGAGCAACATCTTCACGACATCATGTAACGAGTaGCGTCTGCTTTCCAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: ETTSKRRCSRSSGSNIFTTSCNE*RLLSSL Trigger: TAAGCTGGAAAGCAGACGGCACTCGTTACATGATGT...CGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR CCA 90 bp | CTACTGTCCAGAGTCAACGCTGAGGTGCAGCTCAGGATCGGAAACCACCTCCAACAGTATTCTCAGTGGTaGGGCATTCGCCATGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LLSRVNAEVQLRIGNHLQQYSQW*GIRHVL Trigger: AAGGACATGGCGAATGCCCCACCACTGAGAATACTG...TTGGAGGTGGTTTCCGATCCTGAGCTGCACCTCAGCGTTGACTCTGGACAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR CCA 90 bp | GAAACCACCTCCAAGCGCAGGTGCAGCAGGAGCAGTGGGAGCAACATCTTCACGCAATACAGGTGGTGGTaGTGCTTCTTCTATATCTCC | + |
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Preference number: 4 (lower is better) Translates to: ETTSKRRCSRSSGSNIFTQYRWW*CFFYIS Trigger: GGAGATATAGAAGAAGCACCACCACCACCTGTATTG...CGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR CCA 90 bp | GAAACCACCTCCAAGCGCAGGTGCAGCAGGAGCAGTGGGAGCAACATCTTCACGTTCAAAACACCAATCTaGCAATACAGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ETTSKRRCSRSSGSNIFTFKTPI*QYRWWW Trigger: CCACCACCACCTGTATTGCCAGATTGGTGTTTTGAA...CGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR TCA 90 bp | GAAACCACCTCCAAGCGCAGGTGCAGCAGGAGCAGTGGGAGCAACATCTTCACGCATCCATTTCATGGCTaGCTTCTTTGGCAAAATTTC | + |
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Preference number: 4 (lower is better) Translates to: ETTSKRRCSRSSGSNIFTHPFHG*LLWQNF Trigger: GAAATTTTGCCAAAGAAGTCAGCCATGAAATGGATG...CGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR TCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGCTTCCTGCCACCGGCTaGCCGCGCCGCGGACAGTTC | + |
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Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMLPATG*PRRGQF Trigger: GAACTGTCCGCGGCGCGGTCAGCCGGTGGCAGGAAG...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
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| CDS-3UTR CCA 90 bp | CCTCAACAATCCTGTAACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTACAGTCTTTTGGGCGGTaGGGGCGGCATGAGCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: PQQSCNSQVFKFLQCPNVQSFGR*GRHELR Trigger: ACGGAGCTCATGCCGCCCCCACCGCCCAAAAGACTG...TACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTTACAGGATTGTTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| 3UTR CAA 72 bp | TCTGAAGCACTGTTTGAGGGAAATAACACAACGCGGTaGTGCTTGCTGCTGTTCCCAGGGATCACAGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: SEALFEGNNTTR*CLLLFPGITVS Trigger: ACTCACTGTGATCCCTGGGAACAGCAGCAAGCACAACCGCGTTGTGTTATTTCCCTCAAACAGTGCTTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR GCA 90 bp | CTACTGTCCAGAGTCAACGCTGAGGTGCAGCTCAGGATCGGAAACCACCTCCAATGTCACCTTGATTTGTaGAAAGGGTCTTTCATAACC | + |
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Preference number: 4 (lower is better) Translates to: LLSRVNAEVQLRIGNHLQCHLDL*KGSFIT Trigger: GGTTATGAAAGACCCTTTGCACAAATCAAGGTGACA...TTGGAGGTGGTTTCCGATCCTGAGCTGCACCTCAGCGTTGACTCTGGACAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR CCA 90 bp | TGTTTGAGGGAAATAACACAACGCGGTTGTGCTTGCTGCTGTTCCCAGGGATCAGAGAGCATACTGGGATaGAACCGGTTTTCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CLREITQRGCACCCSQGSESILG*NRFSSA Trigger: TGCTGAAGAAAACCGGTTCCATCCCAGTATGCTCTC...TGATCCCTGGGAACAGCAGCAAGCACAACCGCGTTGTGTTATTTCCCTCAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR TCA 90 bp | TGTTTGAGGGAAATAACACAACGCGGTTGTGCTTGCTGCTGTTCCCAGGGATCATCTCACACAGGCGAATaGATGTCTCAGTATTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: CLREITQRGCACCCSQGSSHTGE*MSQYSQ Trigger: CTGAGAATACTGAGACATTCATTCGCCTGTGTGAGA...TGATCCCTGGGAACAGCAGCAAGCACAACCGCGTTGTGTTATTTCCCTCAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS-3UTR GCA 90 bp | AACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTACAAAAGCAACCTAAGCATGGAGACAGGCTGTaGTCCAGGGAACCCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: NSQVFKFLQCPNVQKQPKHGDRL*SREPRP Trigger: GGGTCTGGGTTCCCTGGAGCACAGCCTGTCTCCATG...CTTAGGTTGCTTTTGTACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGAGGAAACCAGTACGGTTaGAGCCATGGGTGCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTSTKPLVSLISLVEKMRGNQYG*SHGCSE Trigger: TTCACTGCACCCATGGCTTCAACCGTACTGGTTTCC...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR GCA 90 bp | TCGTCCAACAGCCTAAATGGCTGTAAGGATACTCCAGGAGGTGATGCGGTTGGGGTCTCCAACTGGTTGTaGATTGAACTTAATTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSNSLNGCKDTPGGDAVGVSNWL*IELNYV Trigger: GACATAATTAAGTTCAATGCACAACCAGTTGGAGAC...CCCAACCGCATCACCTCCTGGAGTATCCTTACAGCCATTTAGGCTGTTGGACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGCCACTGTGTCTGAAGCACTGTTTGAGGGAAATAACACAACGCGGTTGTTGACTATCATATCTTaGCCCCAGCATCGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAATVSEALFEGNNTTRLLTIIS*PQHRLQ Trigger: CTGAAGACGATGCTGGGGCCAAGATATGATAGTCAA...CAACCGCGTTGTGTTATTTCCCTCAAACAGTGCTTCAGACACAGTGGCAGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TCGTCCAACAGCCTAAATGGCTGTAAGGATACTCCAGGAGGTGATGCGGTTGGGACCTATAAGTTCAGGTaGGCTTCTTTCATTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SSNSLNGCKDTPGGDAVGTYKFR*ASFIKP Trigger: AGGTTTAATGAAAGAAGCCCACCTGAACTTATAGGT...CCCAACCGCATCACCTCCTGGAGTATCCTTACAGCCATTTAGGCTGTTGGACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTCACAAGCCAATCAGAACAAGTTTTACAACGGCAGGGACCTACTGTCCAGTGGCAATACAGGTGGTaGTGGTGCTTCTTCTATATC | + |
|
Preference number: 4 (lower is better) Translates to: SFTSQSEQVLQRQGPTVQWQYRW*WCFFYI Trigger: GATATAGAAGAAGCACCACCACCACCTGTATTGCCA...CTGGACAGTAGGTCCCTGCCGTTGTAAAACTTGTTCTGATTGGCTTGTGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGCCACTGTGTCTGAAGCACTGTTTGAGGGAAATAACACAACGCGGTTGATCTGGCAATACAGGTaGTGGTGGTGCTTCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KAATVSEALFEGNNTTRLIWQYR*WWCFFY Trigger: ATAGAAGAAGCACCACCACCACCTGTATTGCCAGAT...CAACCGCGTTGTGTTATTTCCCTCAAACAGTGCTTCAGACACAGTGGCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGCAGTCTTTTGGGCGGTaGGGGCGGCATGAGCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMQSFGR*GRHELR Trigger: ACGGAGCTCATGCCGCCCCCACCGCCCAAAAGACTG...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTGAAGCACTGTTTGAGGGAAATAACACAACGCGGTTGTGCTTGCTGCTGTTATTGCACACAGCCATaGCTGTGTTGTAGGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLKHCLREITQRGCACCCYCTQP*LCCRHL Trigger: CAAATGCCTACAACACAGCCATGGCTGTGTGCAATA...ACAGCAGCAAGCACAACCGCGTTGTGTTATTTCCCTCAAACAGTGCTTCAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTCACAAGCCAATCAGAACAAGTTTTACAACGGCAGGGACCTACTGTCCAGTTTTCTTCAGCAACTTaGCTATCATATCTTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFTSQSEQVLQRQGPTVQFSSAT*LSYLGP Trigger: GGGGCCAAGATATGATAGTCAAGTTGCTGAAGAAAA...CTGGACAGTAGGTCCCTGCCGTTGTAAAACTTGTTCTGATTGGCTTGTGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | CCTCAACAATCCTGTAACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTAGGAAACCAGTACGGTTaGAGCCATGGGTGCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQQSCNSQVFKFLQCPNVGNQYG*SHGCSE Trigger: TTCACTGCACCCATGGCTTCAACCGTACTGGTTTCC...TACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTTACAGGATTGTTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTGAGGGAAATAACACAACGCGGTTGTGCTTGCTGCTGTTCCCAGGGATCAGTTCTTTTGTCACCTTaGTTTGTGCAAAGGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLREITQRGCACCCSQGSVLLSP*FVQRVF Trigger: AAAGACCCTTTGCACAAATCAAGGTGACAAAAGAAC...TGATCCCTGGGAACAGCAGCAAGCACAACCGCGTTGTGTTATTTCCCTCAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR GCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGCATGGAGACAGGCTGTaGTCCAGGGAACCCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMHGDRL*SREPRP Trigger: GGGTCTGGGTTCCCTGGAGCACAGCCTGTCTCCATG...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGACAGTATTCTCAGTGGTaGGGCATTCGCCATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTSTKPLVSLISLVEKMRQYSQW*GIRHVL Trigger: AAGGACATGGCGAATGCCCCACCACTGAGAATACTG...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGAACCCTTGTAGATTCCTaGTGGTCTGGCTTGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTSTKPLVSLISLVEKMRTLVDS*WSGLGK Trigger: TTTGCCCAAGCCAGACCACCAGGAATCTACAAGGGT...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR GCA 90 bp | CCTCAACAATCCTGTAACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTAGGTTCGAGATGCTATTaGACACAGCCATGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQQSCNSQVFKFLQCPNVGSRCY*TQPWLC Trigger: ACACAGCCATGGCTGTGTGCAATAGCATCTCGAACC...TACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTTACAGGATTGTTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGAGAGAGCATACTGGGATaGAACCGGTTTTCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTSTKPLVSLISLVEKMRESILG*NRFSSA Trigger: TGCTGAAGAAAACCGGTTCCATCCCAGTATGCTCTC...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | ATTACAACACACACTGACACAATCAGAGAAGGAATGTCCTGGCATTTCATGGAATCTCAGTATTCTCAGTaGTGGGGCATTCGCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITTHTDTIREGMSWHFMESQYSQ*WGIRHV Trigger: GACATGGCGAATGCCCCACCACTGAGAATACTGAGA...TTCCATGAAATGCCAGGACATTCCTTCTCTGATTGTGTCAGTGTGTGTTGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | AACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTACAAAAGCAACCTAAGACAGCATCTCCTTGGTaGCAGGGTTCGAGATGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: NSQVFKFLQCPNVQKQPKTASPW*QGSRCY Trigger: ATAGCATCTCGAACCCTGTCACCAAGGAGATGCTGT...CTTAGGTTGCTTTTGTACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGACAATACAGGTGGTGGTaGTGCTTCTTCTATATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTSTKPLVSLISLVEKMRQYRWW*CFFYIS Trigger: GGAGATATAGAAGAAGCACCACCACCACCTGTATTG...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTCCTGGTGGTCTGGCTTaGGCAAATGTAGCAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YCSSKETNVPNIYRLTMSPGGLA*ANVATA Trigger: AGCAGTTGCTACATTTGCCCAAGCCAGACCACCAGG...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | AACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTACAAAAGCAACCTAAGTATTTTGCTTGTCCATaGAGACAGGCTGTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSQVFKFLQCPNVQKQPKYFACP*RQAVLQ Trigger: CTGGAGCACAGCCTGTCTCCATGGACAAGCAAAATA...CTTAGGTTGCTTTTGTACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR GCA 90 bp | CCTCAACAATCCTGTAACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTATACAGGTGGTGGTGGTaGTTCTTCTATATCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: PQQSCNSQVFKFLQCPNVYRWWW*FFYISI Trigger: TATGGAGATATAGAAGAAGCACCACCACCACCTGTA...TACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTTACAGGATTGTTGAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR GCA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGATGTCACCTTGATTTGTaGAAAGGGTCTTTCATAACC | + |
|
Preference number: 4 (lower is better) Translates to: CTSTKPLVSLISLVEKMRCHLDL*KGSFIT Trigger: GGTTATGAAAGACCCTTTGCACAAATCAAGGTGACA...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTCAGTATTCTCAGTaGTGGGGCATTCGCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMSQYSQ*WGIRHV Trigger: GACATGGCGAATGCCCCACCACTGAGAATACTGAGA...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTACCCTTGTAGATTCCTaGTGGTCTGGCTTGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YCSSKETNVPNIYRLTMSTLVDS*WSGLGK Trigger: TTTGCCCAAGCCAGACCACCAGGAATCTACAAGGGT...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGAATAGATCAAATATCTTaGGACGGCCTGTCCATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CTSTKPLVSLISLVEKMRIDQIS*DGLSIY Trigger: GTAAATGGACAGGCCGTCCCAAGATATTTGATCTAT...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTGCTGCTGCACATCCATaGCTGTGTTGTAGGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: YCSSKETNVPNIYRLTMSAAAHP*LCCRHL Trigger: CAAATGCCTACAACACAGCCATGGATGTGCAGCAGC...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029942.8 |
||
| CDS-3UTR TCA 90 bp | AACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTACAAAAGCAACCTAAGCTGCACATCTGTCAATaGATTCAAACAGCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSQVFKFLQCPNVQKQPKLHICQ*IQTASP Trigger: AGGAGATGCTGTTTGAATTCATTGACAGATGTGCAG...CTTAGGTTGCTTTTGTACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR GCA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGAGTCTCCAACTGGTTGTaGATTGAACTTAATTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTSTKPLVSLISLVEKMRVSNWL*IELNYV Trigger: GACATAATTAAGTTCAATGCACAACCAGTTGGAGAC...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGAACCTATAAGTTCAGGTaGGCTTCTTTCATTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: CTSTKPLVSLISLVEKMRTYKFR*ASFIKP Trigger: AGGTTTAATGAAAGAAGCCCACCTGAACTTATAGGT...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTATTTTGCTTGTCCATaGAGACAGGCTGTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMYFACP*RQAVLQ Trigger: CTGGAGCACAGCCTGTCTCCATGGACAAGCAAAATA...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGAATCACAGTCTCCAACTaGTTGTGCATTGAACTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CTSTKPLVSLISLVEKMRITVSN*LCIELN Trigger: ATTAAGTTCAATGCACAACCAGTTGGAGACTGTGAT...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | CCTCAACAATCCTGTAACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTACCACAGAGTTTAGACTaGGAGGTTTCCATTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PQQSCNSQVFKFLQCPNVPQSLD*EVSISK Trigger: TTTTGAAATGGAAACCTCCCAGTCTAAACTCTGTGG...TACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTTACAGGATTGTTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTTCTCACACAGGCGAATaGATGTCTCAGTATTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YCSSKETNVPNIYRLTMSSHTGE*MSQYSQ Trigger: CTGAGAATACTGAGACATTCATTCGCCTGTGTGAGA...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGCTATCCTCTGTCTCATaGAGACCCAGCTATTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMLSSVS*RPSYCS Trigger: AGAACAATAGCTGGGTCTTCATGAGACAGAGGATAG...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTCTATCCTCTGTCTCATaGAGACCCAGCTATTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YCSSKETNVPNIYRLTMSLSSVS*RPSYCS Trigger: AGAACAATAGCTGGGTCTTCATGAGACAGAGGATAG...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR GCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGACATCATGTAACGAGTaGCGTCTGCTTTCCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMTSCNE*RLLSSL Trigger: TAAGCTGGAAAGCAGACGGCACTCGTTACATGATGT...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTTGACTATCATATCTTaGCCCCAGCATCGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMLTIIS*PQHRLQ Trigger: CTGAAGACGATGCTGGGGCCAAGATATGATAGTCAA...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTTGGCAATACAGGTGGTaGTGGTGCTTCTTCTATATC | + |
|
Preference number: 4 (lower is better) Translates to: YCSSKETNVPNIYRLTMSWQYRW*WCFFYI Trigger: GATATAGAAGAAGCACCACCACCACCTGTATTGCCA...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTATCTGGCAATACAGGTaGTGGTGGTGCTTCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YCSSKETNVPNIYRLTMSIWQYR*WWCFFY Trigger: ATAGAAGAAGCACCACCACCACCTGTATTGCCAGAT...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTTCAAAACACCAATCTaGCAATACAGGTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMFKTPI*QYRWWW Trigger: CCACCACCACCTGTATTGCCAGATTGGTGTTTTGAA...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTTTTTCTTCAGCAACTTaGCTATCATATCTTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YCSSKETNVPNIYRLTMSFSSAT*LSYLGP Trigger: GGGGCCAAGATATGATAGTCAAGTTGCTGAAGAAAA...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR GCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTACAGGTGGTGGTGGTaGTTCTTCTATATCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMYRWWW*FFYISI Trigger: TATGGAGATATAGAAGAAGCACCACCACCACCTGTA...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR GCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGGTAACGAGTGCCGTCTaGTTTCCAGCTTACTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMVTSAV*FPAYFI Trigger: TATAAAGTAAGCTGGAAAGCAGACGGCACTCGTTAC...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTGTCATAGAACCTTaGAGTATTTGTCAGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMSVIEP*SICQIH Trigger: GTGGATCTGACAAATACTTCAAGGTTCTATGACAGA...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGCATCCATTTCATGGCTaGCTTCTTTGGCAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMHPFHG*LLWQNF Trigger: GAAATTTTGCCAAAGAAGTCAGCCATGAAATGGATG...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR TCA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTGTTCTTTTGTCACCTTaGTTTGTGCAAAGGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YCSSKETNVPNIYRLTMSVLLSP*FVQRVF Trigger: AAAGACCCTTTGCACAAATCAAGGTGACAAAAGAAC...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTAATTTGAGAGCATACTaGGATGGAACCGGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YCSSKETNVPNIYRLTMSNLRAY*DGTGFL Trigger: AAGAAAACCGGTTCCATCCCAGTATGCTCTCAAATT...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGATAGATCAAATATCTTaGGACGGCCTGTCCATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMIDQIS*DGLSIY Trigger: GTAAATGGACAGGCCGTCCCAAGATATTTGATCTAT...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGCCACAGAGTTTAGACTaGGAGGTTTCCATTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMPQSLD*EVSISK Trigger: TTTTGAAATGGAAACCTCCCAGTCTAAACTCTGTGG...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGATCACAGTCTCCAACTaGTTGTGCATTGAACTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMITVSN*LCIELN Trigger: ATTAAGTTCAATGCACAACCAGTTGGAGACTGTGAT...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGAGGTCTGACACTAAATaGTTCCTGTGTTTTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMRSDTK*FLCFVN Trigger: ATTGACAAAACACAGGAACCATTTAGTGTCAGACCT...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTGTGTTGTAGGCATTTaGGAAACTTTTGTCTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: MYCSSKETNVPNIYRLTMCVVGI*ETFVYP Trigger: AGGATAGACAAAAGTTTCCCAAATGCCTACAACACA...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS CCA 90 bp | ATGAGCTCCGTGTCAGGGTCCAGGGGATACTTCCGCTTCTGTCCCTaGGCGGCTGCTGCACATCCATGGCTGTGTTGTAGGCATTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MSSVSGSRGYFRFCP*AAAAHPWLCCRHLG Trigger: TCCCAAATGCCTACAACACAGCCATGGATGTGCAGCAGCCGCCCAGGGACAGAAGCGGAAGTATCCCCTGGACCCTGACACGGAGCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029942.8 |
||
| CDS-3UTR CAA 90 bp | GAAACCACCTCCAAGCGCAGGTGCAGCAGGAGCAGTGGGAGCAACATCTTCACGTCCTGGTGGTCTGGCTaGGGCAAATGTAGCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ETTSKRRCSRSSGSNIFTSWWSG*GKCSNC Trigger: GCAGTTGCTACATTTGCCCAAGCCAGACCACCAGGA...CGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS GCA 90 bp | GTCAGGGTCCAGGGGATACTTCCGCTTCTGTCCCTGGGCGGCTGCTaGACATCTGTCAATGAATTCAAACAGCATCTCCTTGGTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRVQGILPLLSLGGC*TSVNEFKQHLLGDR Trigger: CCTGTCACCAAGGAGATGCTGTTTGAATTCATTGACAGATGTGCAGCAGCCGCCCAGGGACAGAAGCGGAAGTATCCCCTGGACCCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | GAAACCACCTCCAAGCGCAGGTGCAGCAGGAGCAGTGGGAGCAACATCTTCACGAGAACCTTGAAGTATTaGTCAGATCCACCAACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ETTSKRRCSRSSGSNIFTRTLKY*SDPPTS Trigger: GCTTGTTGGTGGATCTGACAAATACTTCAAGGTTCT...CGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | GAAACCACCTCCAAGCGCAGGTGCAGCAGGAGCAGTGGGAGCAACATCTTCACGCATAGATCAAATATCTaGGGACGGCCTGTCCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: ETTSKRRCSRSSGSNIFTHRSNI*GRPVHL Trigger: TAAATGGACAGGCCGTCCCAAGATATTTGATCTATG...CGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TCGTCCAACAGCCTAAATGGCTGTAAGGATACTCCAGGAGGTGATGCGGTTGGGTCAAACAGCATCTCCTaGGTGACAGGGTTCGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSNSLNGCKDTPGGDAVGSNSIS*VTGFEM Trigger: CATCTCGAACCCTGTCACCAAGGAGATGCTGTTTGA...CCCAACCGCATCACCTCCTGGAGTATCCTTACAGCCATTTAGGCTGTTGGACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | GAAACCACCTCCAAGCGCAGGTGCAGCAGGAGCAGTGGGAGCAACATCTTCACGCTAACTTGGGTTGAGTaGTTACTTGAGTTACACCTT | + |
|
Preference number: 5 (lower is better) Translates to: ETTSKRRCSRSSGSNIFTLTWVE*LLELHL Trigger: AAGGTGTAACTCAAGTAACAACTCAACCCAAGTTAG...CGTGAAGATGTTGCTCCCACTGCTCCTGCTGCACCTGCGCTTGGAGGTGGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TCGTCCAACAGCCTAAATGGCTGTAAGGATACTCCAGGAGGTGATGCGGTTGGGGTTTTCTTCAGCAACTaGACTATCATATCTTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSNSLNGCKDTPGGDAVGVFFSN*TIISWP Trigger: GGGCCAAGATATGATAGTCAAGTTGCTGAAGAAAAC...CCCAACCGCATCACCTCCTGGAGTATCCTTACAGCCATTTAGGCTGTTGGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGAGAGGCACGGACTAGGTaGGCCGATGCAGTCTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CTSTKPLVSLISLVEKMREARTR*ADAVFW Trigger: CCAAAAGACTGCATCGGCCAACCTAGTCCGTGCCTC...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029942.8 |
||
| CDS CCA 90 bp | GCGACGAAAAAGTTCCTTCAAATAATCACCCTTGTAGATTCCTGGTaGTCTGGCTTGGGCAAATGTAGCAACTGCTGCTTCAATACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ATKKFLQIITLVDSW*SGLGKCSNCCFNTP Trigger: TGGAGTATTGAAGCAGCAGTTGCTACATTTGCCCAAGCCAGACCACCAGGAATCTACAAGGGTGATTATTTGAAGGAACTTTTTCGTCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGCCACTGTGTCTGAAGCACTGTTTGAGGGAAATAACACAACGCGGTTGAATGGTTCCTGTGTTTaGTCAATGAGTCCAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KAATVSEALFEGNNTTRLNGSCV*SMSPVF Trigger: GAAGACTGGACTCATTGACAAAACACAGGAACCATT...CAACCGCGTTGTGTTATTTCCCTCAAACAGTGCTTCAGACACAGTGGCAGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTGAGGGAAATAACACAACGCGGTTGTGCTTGCTGCTGTTCCCAGGGATCATTCTGTCATAGAACCTaGAAGTATTTGTCAGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLREITQRGCACCCSQGSFCHRT*KYLSDP Trigger: TGGATCTGACAAATACTTCAAGGTTCTATGACAGAA...TGATCCCTGGGAACAGCAGCAAGCACAACCGCGTTGTGTTATTTCCCTCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS CCA 90 bp | ATAGCGACGAAAAAGTTCCTTCAAATAATCACCCTTGTAGATTCCTaGTGGTCTGGCTTGGGCAAATGTAGCAACTGCTGCTTCAATACT | + |
|
Preference number: 5 (lower is better) Translates to: IATKKFLQIITLVDS*WSGLGKCSNCCFNT Trigger: AGTATTGAAGCAGCAGTTGCTACATTTGCCCAAGCCAGACCACCAGGAATCTACAAGGGTGATTATTTGAAGGAACTTTTTCGTCGCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCCTGGTGGTCTGGCTaGGGCAAATGTAGCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: MYCSSKETNVPNIYRLTMSWWSG*GKCSNC Trigger: GCAGTTGCTACATTTGCCCAAGCCAGACCACCAGGA...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS CCA 90 bp | TTCATCCTCATCTTCAAAACACCAATCTGGCAATACAGGTGGTGGTaGTGCTTCTTCTATATCTCCATAGCGACGAAAAAGTTCCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: FILIFKTPIWQYRWW*CFFYISIATKKFLQ Trigger: TTGAAGGAACTTTTTCGTCGCTATGGAGATATAGAAGAAGCACCACCACCACCTGTATTGCCAGATTGGTGTTTTGAAGATGAGGATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS CCA 90 bp | ATCTTCTTCATCCTCATCTTCAAAACACCAATCTGGCAATACAGGTaGTGGTGGTGCTTCTTCTATATCTCCATAGCGACGAAAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFFILIFKTPIWQYR*WWCFFYISIATKKF Trigger: GAACTTTTTCGTCGCTATGGAGATATAGAAGAAGCACCACCACCACCTGTATTGCCAGATTGGTGTTTTGAAGATGAGGATGAAGAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | AACAGTCAGGTGTTTAAATTCCTTCAGTGCCCAAATGTACAAAAGCAACCTAAGCTTGACTATCATATCTaGGCCCCAGCATCGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSQVFKFLQCPNVQKQPKLDYHI*APASSS Trigger: TGAAGACGATGCTGGGGCCAAGATATGATAGTCAAG...CTTAGGTTGCTTTTGTACATTTGGGCACTGAAGGAATTTAAACACCTGACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGAAGAACCTTGAAGTATTaGTCAGATCCACCAACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CTSTKPLVSLISLVEKMRRTLKY*SDPPTS Trigger: GCTTGTTGGTGGATCTGACAAATACTTCAAGGTTCT...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | AGCTGTTGTAACATAAGCCGAGAAGGGAAGTTTTCCTTCAAGATGTCCAAATCCAGTCTAATATTTTGCTaGTCCATGGAGACAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SCCNISREGKFSFKMSKSSLIFC*SMETGC Trigger: ACAGCCTGTCTCCATGGACAAGCAAAATATTAGACT...GGATTTGGACATCTTGAAGGAAAACTTCCCTTCTCGGCTTATGTTACAACAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGACATAGATCAAATATCTaGGGACGGCCTGTCCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: CTSTKPLVSLISLVEKMRHRSNI*GRPVHL Trigger: TAAATGGACAGGCCGTCCCAAGATATTTGATCTATG...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGAAATGGTTCCTGTGTTTaGTCAATGAGTCCAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CTSTKPLVSLISLVEKMRNGSCV*SMSPVF Trigger: GAAGACTGGACTCATTGACAAAACACAGGAACCATT...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | AAGCCTTCCCATGCGATAACTCAGGGAAACAGTCTTCTTAGTCCTGTCTGGAAATTTTGTCACCTTGATTaGTGCAAAGGGTCTTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: KPSHAITQGNSLLSPVWKFCHLD*CKGSFI Trigger: TATGAAAGACCCTTTGCACAAATCAAGGTGACAAAA...TTTCCAGACAGGACTAAGAAGACTGTTTCCCTGAGTTATCGCATGGGAAGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGACTGTGTTGTAGGCATTaGGGAAACTTTTGTCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: CTSTKPLVSLISLVEKMRLCCRH*GNFCLS Trigger: GGATAGACAAAAGTTTCCCAAATGCCTACAACACAG...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS GCA 90 bp | ATCCTCATCTTCAAAACACCAATCTGGCAATACAGGTGGTGGTGGTaGTTCTTCTATATCTCCATAGCGACGAAAAAGTTCCTTCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: ILIFKTPIWQYRWWW*FFYISIATKKFLQI Trigger: TATTTGAAGGAACTTTTTCGTCGCTATGGAGATATAGAAGAAGCACCACCACCACCTGTATTGCCAGATTGGTGTTTTGAAGATGAGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGCTTGACTATCATATCTaGGCCCCAGCATCGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MYCSSKETNVPNIYRLTMLDYHI*APASSS Trigger: TGAAGACGATGCTGGGGCCAAGATATGATAGTCAAG...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TGTACCAGTACGAAGCCGCTCGTCTCTTTAATTTCTCTGGTTGAGAAAATGAGATTCTGTCATAGAACCTaGAAGTATTTGTCAGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: CTSTKPLVSLISLVEKMRFCHRT*KYLSDP Trigger: TGGATCTGACAAATACTTCAAGGTTCTATGACAGAA...TCTCATTTTCTCAACCAGAGAAATTAAAGAGACGAGCGGCTTCGTACTGGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTGTTTTCTTCAGCAACTaGACTATCATATCTTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YCSSKETNVPNIYRLTMSVFFSN*TIISWP Trigger: GGGCCAAGATATGATAGTCAAGTTGCTGAAGAAAAC...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGGGCTCTTTAGATAATTaGAGAGCATACTGGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: MYCSSKETNVPNIYRLTMGSLDN*RAYWDG Trigger: TCCATCCCAGTATGCTCTCAAATTATCTAAAGAGCC...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTAGTCTAATATTTTGCTaGTCCATGGAGACAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YCSSKETNVPNIYRLTMSSLIFC*SMETGC Trigger: ACAGCCTGTCTCCATGGACAAGCAAAATATTAGACT...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTGGGTTGAGTTGTTACTaGAGTTACACCTTTAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: YCSSKETNVPNIYRLTMSGLSCY*SYTFNS Trigger: ACTGTTAAAGGTGTAACTCAAGTAACAACTCAACCC...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | ATGTACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGCTAACTTGGGTTGAGTaGTTACTTGAGTTACACCTT | + |
|
Preference number: 5 (lower is better) Translates to: MYCSSKETNVPNIYRLTMLTWVE*LLELHL Trigger: AAGGTGTAACTCAAGTAACAACTCAACCCAAGTTAG...CATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTAGTTCTTTTGTCACCTaGATTTGTGCAAAGGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YCSSKETNVPNIYRLTMSSSFVT*ICAKGL Trigger: AAGACCCTTTGCACAAATCAAGGTGACAAAAGAACT...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTAGTTCCAAGGAAACAAATGTACCAAATATATACAGGCTGACTATGTCTTTTTGTCACCTTGATTaGTGCAAAGGGTCTTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: YCSSKETNVPNIYRLTMSFCHLD*CKGSFI Trigger: TATGAAAGACCCTTTGCACAAATCAAGGTGACAAAA...AGACATAGTCAGCCTGTATATATTTGGTACATTTGTTTCCTTGGAACTACAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
||
| CDS CCA 72 bp | CACGGACTAGGTTGGCCGATGCAGTCTTTTGGGCGGTaGGGGCGGCATGAGCTCCGTGTCAGGGTCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: HGLGWPMQSFGR*GRHELRVRVQG Trigger: CCCCTGGACCCTGACACGGAGCTCATGCCGCCCCCACCGCCCAAAAGACTGCATCGGCCAACCTAGTCCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029942.8 |
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| CDS CCA 72 bp | GTGTCAGGGTCCAGGGGATACTTCCGCTTCTGTCCCTaGGCGGCTGCTGCACATCCATGGCTGTGTTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: VSGSRGYFRFCP*AAAAHPWLCCR Trigger: CCTACAACACAGCCATGGATGTGCAGCAGCCGCCCAGGGACAGAAGCGGAAGTATCCCCTGGACCCTGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029942.8 |
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| CDS CCA 72 bp | GTGTCAGGGTCCAGGGGATACTTCCGCTTCTGTCCCTaGGCGGCTGCTGCACATCTGTCAATGAATTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: VSGSRGYFRFCP*AAAAHLSMNSN Trigger: GTTTGAATTCATTGACAGATGTGCAGCAGCCGCCCAGGGACAGAAGCGGAAGTATCCCCTGGACCCTGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS GCA 72 bp | CAGGGGATACTTCCGCTTCTGTCCCTGGGCGGCTGCTaGACATCTGTCAATGAATTCAAACAGCATCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: QGILPLLSLGGC*TSVNEFKQHLL Trigger: AAGGAGATGCTGTTTGAATTCATTGACAGATGTGCAGCAGCCGCCCAGGGACAGAAGCGGAAGTATCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS CAA 72 bp | GCTGCACATCTGTCAATGAATTCAAACAGCATCTCCTaGGTGACAGGGTTCGAGATGCTATTGCACACAGCC | + |
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Preference number: 6 (lower is better) Translates to: AAHLSMNSNSIS*VTGFEMLLHTA Trigger: GGCTGTGTGCAATAGCATCTCGAACCCTGTCACCAAGGAGATGCTGTTTGAATTCATTGACAGATGTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108153.9 |
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| CDS CCA 72 bp | AAGTTCCTTCAAATAATCACCCTTGTAGATTCCTGGTaGTCTGGCTTGGGCAAATGTAGCAACTGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KFLQIITLVDSW*SGLGKCSNCCF Trigger: GAAGCAGCAGTTGCTACATTTGCCCAAGCCAGACCACCAGGAATCTACAAGGGTGATTATTTGAAGGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
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| CDS CAA 72 bp | GGAACCGGTTTTCTTCAGCAACTTGACTATCATATCTaGGCCCCAGCATCGTCTTCAGAGGTAAGAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: GTGFLQQLDYHI*APASSSEVRIF Trigger: GAAGATTCTTACCTCTGAAGACGATGCTGGGGCCAAGATATGATAGTCAAGTTGCTGAAGAAAACCGGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
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| CDS CAA 72 bp | CAAATAATCACCCTTGTAGATTCCTGGTGGTCTGGCTaGGGCAAATGTAGCAACTGCTGCTTCAATACTCCA | + |
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Preference number: 6 (lower is better) Translates to: QIITLVDSWWSG*GKCSNCCFNTP Trigger: TGGAGTATTGAAGCAGCAGTTGCTACATTTGCCCAAGCCAGACCACCAGGAATCTACAAGGGTGATTATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
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| CDS GCA 72 bp | TTCAAAACACCAATCTGGCAATACAGGTGGTGGTGGTaGTTCTTCTATATCTCCATAGCGACGAAAAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: FKTPIWQYRWWW*FFYISIATKKF Trigger: GAACTTTTTCGTCGCTATGGAGATATAGAAGAAGCACCACCACCACCTGTATTGCCAGATTGGTGTTTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
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| CDS CCA 72 bp | ATCTTCAAAACACCAATCTGGCAATACAGGTGGTGGTaGTGCTTCTTCTATATCTCCATAGCGACGAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: IFKTPIWQYRWW*CFFYISIATKK Trigger: CTTTTTCGTCGCTATGGAGATATAGAAGAAGCACCACCACCACCTGTATTGCCAGATTGGTGTTTTGAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
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| CDS TCA 72 bp | AGGCATTTGGGAAACTTTTGTCTATCCTCTGTCTCATaGAGACCCAGCTATTGTTCTCAAATTTGCATTCTA | + |
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Preference number: 6 (lower is better) Translates to: RHLGNFCLSSVS*RPSYCSQICIL Trigger: TAGAATGCAAATTTGAGAACAATAGCTGGGTCTTCATGAGACAGAGGATAGACAAAAGTTTCCCAAATGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
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| CDS GCA 72 bp | ATGATCATTTCCCCATCCAAAAGAGTATTTGATAAATaGATGCGAAGATCTTTACGAAATGGAAATTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: MIISPSKRVFDK*MRRSLRNGNSR Trigger: TCTGGAATTTCCATTTCGTAAAGATCTTCGCATGCATTTATCAAATACTCTTTTGGATGGGGAAATGATCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029942.8 ENSMUST00000108153.9 |
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