Pregenerated sensors for RNF8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090083Ensembl transcript IDs: ENSMUST00000024817.15, ENSMUST00000162588.3, ENSMUST00000172485.8, ENSMUST00000234362.2, ENSMUST00000234498.2
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGCAGGCCTTCTGCTTCTTAGGACAACTGAGTTCCAGGACCTTTaGAAGAGCAGAGCAAGCATGAGGCCCGGCGGCCCTCTCACTCGC | + |
|
Preference number: 1 (lower is better) Translates to: SAGLLLLRTTEFQDL*KSRASMRPGGPLTR Trigger: GCGAGTGAGAGGGCCGCCGGGCCTCATGCTTGCTCTGCTCTTCCAAAGGTCCTGGAACTCAGTTGTCCTAAGAAGCAGAAGGCCTGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR TCA 90 bp | TTAGGACAACTGAGTTCCAGGACCTTTGGAAGAGCAGAGCAAGCATaGGGCCCGGCGGCCCTCTCACTCGCCTTCAGAGAAGTCAGCCCA | + |
|
Preference number: 1 (lower is better) Translates to: LGQLSSRTFGRAEQA*GPAALSLAFREVSP Trigger: TGGGCTGACTTCTCTGAAGGCGAGTGAGAGGGCCGCCGGGCCTCATGCTTGCTCTGCTCTTCCAAAGGTCCTGGAACTCAGTTGTCCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR TCA 90 bp | TCTTCGGGGCAAGGCAGGGAGCCAGACTCTCCCAGTCTTCTTCAATaGCTTCGTATTCATACTCCGCCGTCTCCCTGCTTTCCAGCGGCA | + |
|
Preference number: 1 (lower is better) Translates to: SSGQGREPDSPSLLQ*LRIHTPPSPCFPAA Trigger: TGCCGCTGGAAAGCAGGGAGACGGCGGAGTATGAATACGAAGTCATTGAAGAAGACTGGGAGAGTCTGGCTCCCTGCCTTGCCCCGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR GCA 90 bp | CAGGTCGCACTCTCCTTGCTCTTTCTCCAAACCCTGGAGGTAATGTaGCTCCTCCTGGAAAGTCTTCTCCAGCTGCTCCACTCTGGCTTG | + |
|
Preference number: 1 (lower is better) Translates to: QVALSLLFLQTLEVM*LLLESLLQLLHSGL Trigger: CAAGCCAGAGTGGAGCAGCTGGAGAAGACTTTCCAGGAGGAGGCACATTACCTCCAGGGTTTGGAGAAAGAGCAAGGAGAGTGCGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CCA 90 bp | AGGTTTGGGGCCGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTaGTTCCTTCAGGACCAGGGCATTATCATCATGCATGGCTGCTCA | + |
|
Preference number: 1 (lower is better) Translates to: RFGAGERAQWFRALS*FLQDQGIIIMHGCS Trigger: TGAGCAGCCATGCATGATGATAATGCCCTGGTCCTGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCGGCCCCAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR TCA 90 bp | CTCGCCTTCAGAGAAGTCAGCCCAGGACACAAGCATCCCAAGGACTaGCTCGATGCGTCACCTTTGCCATGCAACTTCTCTGGCTCAATG | + |
|
Preference number: 1 (lower is better) Translates to: LAFREVSPGHKHPKD*LDASPLPCNFSGSM Trigger: CATTGAGCCAGAGAAGTTGCATGGCAAAGGTGACGCATCGAGTCAGTCCTTGGGATGCTTGTGTCCTGGGCTGACTTCTCTGAAGGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR GCA 90 bp | GAAGGCCCAAGTCCGATCCTCAGAAACAATCTGATTCCCGCATGGTaGCTAACTAAAACCCTGGGAGGCACTGGGAGGCAGAGGAAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: EGPSPILRNNLIPAW*LTKTLGGTGRQRKE Trigger: TTCCTTCCTCTGCCTCCCAGTGCCTCCCAGGGTTTTAGTTAGGCACCATGCGGGAATCAGATTGTTTCTGAGGATCGGACTTGGGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR GCA 90 bp | GCATGGCTGCTCACAACCACCTATAAACTGTCCCAGGGCAGCTGGTaGCTTCTCTTGCTTCTGTGGGGCCCTGCATATAGTATACATGGC | + |
|
Preference number: 1 (lower is better) Translates to: AWLLTTTYKLSQGSW*LLLLLWGPAYSIHG Trigger: GCCATGTATACTATATGCAGGGCCCCACAGAAGCAAGAGAAGGCACCAGCTGCCCTGGGACAGTTTATAGGTGGTTGTGAGCAGCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 90 bp | CTTGAAGGCCCAAGTCCGATCCTCAGAAACAATCTGATTCCCGCATaGTGCCTAACTAAAACCCTGGGAGGCACTGGGAGGCAGAGGAAG | + |
|
Preference number: 1 (lower is better) Translates to: LEGPSPILRNNLIPA*CLTKTLGGTGRQRK Trigger: CTTCCTCTGCCTCCCAGTGCCTCCCAGGGTTTTAGTTAGGCACCATGCGGGAATCAGATTGTTTCTGAGGATCGGACTTGGGCCTTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 90 bp | GGTAATGTGCCTCCTCCTGGAAAGTCTTCTCCAGCTGCTCCACTCTaGCTTGCTGCTGAGCCTGCTCTGCATACAGCTGAGACTGTAAGT | + |
|
Preference number: 1 (lower is better) Translates to: GNVPPPGKSSPAAPL*LAAEPALHTAETVS Trigger: ACTTACAGTCTCAGCTGTATGCAGAGCAGGCTCAGCAGCAAGCCAGAGTGGAGCAGCTGGAGAAGACTTTCCAGGAGGAGGCACATTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CCA 90 bp | GACTGCCATCACTGCAACCGTACGAGTTTTATTATCCCAACATACTaGGGACTCCCCCTCTCAGGACACAGGCCAGAGAAGAGCCCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: DCHHCNRTSFIIPTY*GLPLSGHRPEKSPE Trigger: TTCTGGGCTCTTCTCTGGCCTGTGTCCTGAGAGGGGGAGTCCCCAGTATGTTGGGATAATAAAACTCGTACGGTTGCAGTGATGGCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 90 bp | ACACAAACTGGCACAGTTGTGAGCCCAGCACCCAGAAGACAGAGGTaGGAGGAGACAAAGGGCAAAGTCTCCCTCAGTTACACAGTTTGG | + |
|
Preference number: 1 (lower is better) Translates to: TQTGTVVSPAPRRQR*EETKGKVSLSYTVW Trigger: CCAAACTGTGTAACTGAGGGAGACTTTGCCCTTTGTCTCCTCCCACCTCTGTCTTCTGGGTGCTGGGCTCACAACTGTGCCAGTTTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 90 bp | TCCCAAGGACTGACTCGATGCGTCACCTTTGCCATGCAACTTCTCTaGCTCAATGGGTTTACTGGCGACATTAGCCAGTGGGCATCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: SQGLTRCVTFAMQLL*LNGFTGDISQWASE Trigger: CTCAGATGCCCACTGGCTAATGTCGCCAGTAAACCCATTGAGCCAGAGAAGTTGCATGGCAAAGGTGACGCATCGAGTCAGTCCTTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR GCA 90 bp | TGCTTTCCAGCGGCACACCGAGCTGGATATGGTCTCCCTTACGGATaGAATAACCCTGTAATGGTGCCAGACGTTCTCTGTTCAGCCAAA | + |
|
Preference number: 1 (lower is better) Translates to: CFPAAHRAGYGLPYG*NNPVMVPDVLCSAK Trigger: TTTGGCTGAACAGAGAACGTCTGGCACCATTACAGGGTTATTGCATCCGTAAGGGAGACCATATCCAGCTCGGTGTGCCGCTGGAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR CCA 90 bp | ACCTATAAACTGTCCCAGGGCAGCTGGTGCCTTCTCTTGCTTCTGTaGGGCCCTGCATATAGTATACATGGCTACGTACACACACTCAGG | + |
|
Preference number: 1 (lower is better) Translates to: TYKLSQGSWCLLLLL*GPAYSIHGYVHTLR Trigger: CCTGAGTGTGTGTACGTAGCCATGTATACTATATGCAGGGCCCCACAGAAGCAAGAGAAGGCACCAGCTGCCCTGGGACAGTTTATAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR GCA 90 bp | TCACAACCACCTATAAACTGTCCCAGGGCAGCTGGTGCCTTCTCTTaGTTCTGTGGGGCCCTGCATATAGTATACATGGCTACGTACACA | + |
|
Preference number: 1 (lower is better) Translates to: SQPPINCPRAAGAFS*FCGALHIVYMATYT Trigger: TGTGTACGTAGCCATGTATACTATATGCAGGGCCCCACAGAAGCAAGAGAAGGCACCAGCTGCCCTGGGACAGTTTATAGGTGGTTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR GCA 90 bp | GAGCTCCCCTTCCGAGTCTGTCTCTTGACGTTTAGGACAGCTATCTaGTTCTCCTGCATCTGTGTTTTCAGCTTCAGCATCCTGGACATG | + |
|
Preference number: 1 (lower is better) Translates to: ELPFRVCLLTFRTAI*FSCICVFSFSILDM Trigger: CATGTCCAGGATGCTGAAGCTGAAAACACAGATGCAGGAGAAGCAGATAGCTGTCCTAAACGTCAAGAGACAGACTCGGAAGGGGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CCA 90 bp | TTCAGGGTGACAGCCTCAATAAAGTACTCCGAGCAGATAATGCACTaGAGCTCGTTCTCCAGCAAGTCGTTCATGTGGCTGAGAACCTCC | + |
|
Preference number: 1 (lower is better) Translates to: FRVTASIKYSEQIMH*SSFSSKSFMWLRTS Trigger: GGAGGTTCTCAGCCACATGAACGACTTGCTGGAGAACGAGCTCCAGTGCATTATCTGCTCGGAGTACTTTATTGAGGCTGTCACCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR TCA 90 bp | CACGCCTTTAATCTCTGCACTCAGGTAACTAGGCAGGTGGATCTCTaGATTCAAGGTCAGCCTGGGCTACATAGTTGGTTCCAAGACAGC | + |
|
Preference number: 1 (lower is better) Translates to: HAFNLCTQVTRQVDL*IQGQPGLHSWFQDS Trigger: GCTGTCTTGGAACCAACTATGTAGCCCAGGCTGACCTTGAATTCAGAGATCCACCTGCCTAGTTACCTGAGTGCAGAGATTAAAGGCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR TCA 90 bp | CCATCCTCACGATCTTCTTTGAGCTCCCCTTCCGAGTCTGTCTCTTaGCGTTTAGGACAGCTATCTGCTTCTCCTGCATCTGTGTTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: PSSRSSLSSPSESVS*RLGQLSASPASVFS Trigger: TGAAAACACAGATGCAGGAGAAGCAGATAGCTGTCCTAAACGTCAAGAGACAGACTCGGAAGGGGAGCTCAAAGAAGATCGTGAGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR TCA 90 bp | TTCAGCATCCTGGACATGGTCACCTTAAACAGTTCTAAGCTGTTCTaGGATGCTGATGGTCTGCAGGCCTTCTGCTTCTTAGGACAACTG | + |
|
Preference number: 1 (lower is better) Translates to: FSILDMVTLNSSKLF*DADGLQAFCFLGQL Trigger: CAGTTGTCCTAAGAAGCAGAAGGCCTGCAGACCATCAGCATCTCAGAACAGCTTAGAACTGTTTAAGGTGACCATGTCCAGGATGCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR GCA 90 bp | GTTGGAGTTCGTCAAGAGACCCTCACTCACAAAGACCACAGAGACTaGCATCACTGCAACCGTACGAGTTTTATTATCCCAACATACTGG | + |
|
Preference number: 1 (lower is better) Translates to: VGVRQETLTHKDHRD*HHCNRTSFIIPTYW Trigger: CCAGTATGTTGGGATAATAAAACTCGTACGGTTGCAGTGATGGCAGTCTCTGTGGTCTTTGTGAGTGAGGGTCTCTTGACGAACTCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 90 bp | TACAGTCTAGGCATTTATTCACAAATAAGCCTCAGCGTCGTTATTTaGGAACTGGGATCCAGGGAGACAAGCCCGCAGTTACAAAGCCAA | + |
|
Preference number: 1 (lower is better) Translates to: YSLGIYSQISLSVVI*ELGSRETSPQLQSQ Trigger: TTGGCTTTGTAACTGCGGGCTTGTCTCCCTGGATCCCAGTTCCCAAATAACGACGCTGAGGCTTATTTGTGAATAAATGCCTAGACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 90 bp | ACTTTCCGTTTCATCCATTCATTGATACAGAAGGAGCAGAAACTGTaGGCACAGTTCAGGGTGACAGCCTCAATAAAGTACTCCGAGCAG | + |
|
Preference number: 1 (lower is better) Translates to: TFRFIHSLIQKEQKL*AQFRVTASIKYSEQ Trigger: CTGCTCGGAGTACTTTATTGAGGCTGTCACCCTGAACTGTGCCCACAGTTTCTGCTCCTTCTGTATCAATGAATGGATGAAACGGAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CCA 90 bp | GTTGATGTGCCAGAAAACTTTGTCAGCAAGGTTAAGGCAGTTATGTaGTTTATCTCAGATTTCAAACTGAGGCAGGGTTTCCAAGGACTG | + |
|
Preference number: 1 (lower is better) Translates to: VDVPENFVSKVKAVM*FISDFKLRQGFQGL Trigger: CAGTCCTTGGAAACCCTGCCTCAGTTTGAAATCTGAGATAAACCACATAACTGCCTTAACCTTGCTGACAAAGTTTTCTGGCACATCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR GCA 90 bp | AGCTTCTGTTTTCCACTTTCCCAGAAATGTTACAATGTAGCTCCTTaGAAGTCTTTACTACTGTTGTTCTTCCATAGTTCCCAAACATTG | + |
|
Preference number: 1 (lower is better) Translates to: SFCFPLSQKCYNVAP*KSLLLLFFHSSQTL Trigger: CAATGTTTGGGAACTATGGAAGAACAACAGTAGTAAAGACTTGCAAGGAGCTACATTGTAACATTTCTGGGAAAGTGGAAAACAGAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR TCA 90 bp | GCGGCCCTGAACTTGAGCTCTCAGGCTGAGGGCTGCTGGCAGTCTATCAGGGACGCAGCAGGGCCTGCATaGCGGAAGGCCAGTGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: AALNLSSQAEGCWQSIRDAAGPA*RKASGT Trigger: TGTGCCACTGGCCTTCCGTCATGCAGGCCCTGCTGC...GTCCCTGATAGACTGCCAGCAGCCCTCAGCCTGAGAGCTCAAGTTCAGGGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR GCA 90 bp | CAGTGGCACAGACTTCCTAACTCAGTCTCTGCAGCGCATGGCTTCCAGAAGACGAGGCGTGCGCCACCATaGCCGGCTGAGCTGCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: QWHRLPNSVSAAHGFQKTRRAPP*PAELPV Trigger: CACTGGCAGCTCAGCCGGGCATGGTGGCGCACGCCT...CGTCTTCTGGAAGCCATGCGCTGCAGAGACTGAGTTAGGAAGTCTGTGCCACTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR GCA 90 bp | CGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTGGTTCCTTCAGGACCAGGGCTGGGATCAAAGGCATaGGCCACCACTGCCTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RREGSVVQSTLLVPSGPGLGSKA*ATTAWL Trigger: CAGCCAGGCAGTGGTGGCGCATGCCTTTGATCCCAG...CCCTGGTCCTGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR CCA 90 bp | CACTGGAGCTCGTTCTCCAGCAAGTCGTTCATGTGGCTGAGAACCTCCTCCTTCGGTCCCAGCACACGTTaGGGGGTGGTAGCAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: HWSSFSSKSFMWLRTSSFGPSTR*GVVAAG Trigger: CCCTGCTGCTACCACCCCCCAACGTGTGCTGGGACC...GAAGGAGGAGGTTCTCAGCCACATGAACGACTTGCTGGAGAACGAGCTCCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCGCATGGCTTCCAGAAGACGTCCAGAGCAGCCTCAGGGAATCCAGGGAATCCTCTTCCATTAGAGCCTaGTGCTCCTGCAGGGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SAWLPEDVQSSLRESRESSSIRA*CSCRAC Trigger: GCAGGCCCTGCAGGAGCATCAGGCTCTAATGGAAGA...GGATTCCCTGGATTCCCTGAGGCTGCTCTGGACGTCTTCTGGAAGCCATGCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CAA 90 bp | CTCCTGCAGGGCCTGCACCAGCTGTTGCTTCAGGTCGCACTCTCCTaGCTCTTTCTCCAAACCCTGGAGGTAATGTGCCTCCTCCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLQGLHQLLLQVALS*LFLQTLEVMCLLLE Trigger: TTCCAGGAGGAGGCACATTACCTCCAGGGTTTGGAGAAAGAGCAAGGAGAGTGCGACCTGAAGCAACAGCTGGTGCAGGCCCTGCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTGGGGCCGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTGGTTCCTTCACTTGAGCTCTCAGGCTaGGGGCTGCTGGCAGTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: VWGRREGSVVQSTLLVPSLELSG*GLLAVY Trigger: ATAGACTGCCAGCAGCCCTCAGCCTGAGAGCTCAAG...TGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCGGCCCCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCAGAAGACGTCCAGAGCAGCCTCAGGGAATCCAGGGAATCCTCTAGAACAGGTAGCAGCAGGGCCTaGATGACGGAAGGCCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LPEDVQSSLRESRESSRTGSSRA*MTEGQW Trigger: CCACTGGCCTTCCGTCATGCAGGCCCTGCTGCTACC...TGTTCTAGAGGATTCCCTGGATTCCCTGAGGCTGCTCTGGACGTCTTCTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CAA 90 bp | CAGAATGAAAACAACACCAAGAGCCCACCAGGTGCGGCCCTGAACTaGAGCTCTCAGGCTGAGGGCTGCTGGCAGTCTATCAGGGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: QNENNTKSPPGAALN*SSQAEGCWQSIRDS Trigger: ACTGTCCCTGATAGACTGCCAGCAGCCCTCAGCCTGAGAGCTCAAGTTCAGGGCCGCACCTGGTGGGCTCTTGGTGTTGTTTTCATTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 90 bp | GAGGTTTGGGGCCGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTaGGTTCCTTCAGGACCAGGGCATTATCATCATGCATGGCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: EVWGRREGSVVQSTL*VPSGPGHYHHAWLL Trigger: GAGCAGCCATGCATGATGATAATGCCCTGGTCCTGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCGGCCCCAAACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR TCA 90 bp | CGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTGGTTCCTTCAGGACCAGGGGGAGAGATGGCTGAGTaGTTAAGAGCACTGCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RREGSVVQSTLLVPSGPGGEMAE*LRALPA Trigger: AGCAGGCAGTGCTCTTAATCACTCAGCCATCTCTCC...CCCTGGTCCTGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR TCA 90 bp | CGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTGGTTCCTTCAGGACCAGGGGTTGCCATGCAAACTTaGAGGCCCAAGTCCGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: RREGSVVQSTLLVPSGPGVAMQT*RPKSDP Trigger: AGGATCGGACTTGGGCCTTCAAGTTTGCATGGCAAC...CCCTGGTCCTGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR GCA 90 bp | GATAATGCACTGGAGCTCGTTCTCCAGCAAGTCGTTCATGTGGCTGAGAACCTCGGTAGCAGCAGGGCCTaGATGACGGAAGGCCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: DNALELVLQQVVHVAENLGSSRA*MTEGQW Trigger: CCACTGGCCTTCCGTCATGCAGGCCCTGCTGCTACC...GAGGTTCTCAGCCACATGAACGACTTGCTGGAGAACGAGCTCCAGTGCATTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCTACTTGGCAAGCTCCAGGCTAATGAGACCCGATCTCAAAACACAGCGTGGACAAGAGCCCACCAGGTaGGGCCCTGAACTTGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: AYLASSRLMRPDLKTQRGQEPTR*GPELEL Trigger: GAGCTCAAGTTCAGGGCCGCACCTGGTGGGCTCTTG...TCCACGCTGTGTTTTGAGATCGGGTCTCATTAGCCTGGAGCTTGCCAAGTAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR CCA 90 bp | CTCCAGGCTAATGAGACCCGATCTCAAAACACAGCGTGGAGGCTGGGGGTGGGGATGACGGAAGGCCAGTaGCACAGACTTCCTAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: LQANETRSQNTAWRLGVGMTEGQ*HRLPNS Trigger: TGAGTTAGGAAGTCTGTGCCACTGGCCTTCCGTCAT...CCCCACCCCCAGCCTCCACGCTGTGTTTTGAGATCGGGTCTCATTAGCCTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR CCA 90 bp | CACAGACTTCCTAACTCAGTCTCTGCAGCGCATGGCTTCCAGAAGACGTCCAGACCAGCTGCTCCACTCTaGCTTGCTGCTGAGCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HRLPNSVSAAHGFQKTSRPAAPL*LAAEPA Trigger: AGCAGGCTCAGCAGCAAGCCAGAGTGGAGCAGCTGG...TCTGGACGTCTTCTGGAAGCCATGCGCTGCAGAGACTGAGTTAGGAAGTCTGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGAAGATTCTCTAACCCAGGCGAACTGAATTTCCTCTTAGTTCTCGAGCCTGCAGCAGGGCCTGCATaGCGGAAGGCCAGTGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: AGRFSNPGELNFLLVLEPAAGPA*RKASGT Trigger: TGTGCCACTGGCCTTCCGTCATGCAGGCCCTGCTGC...AGGCTCGAGAACTAAGAGGAAATTCAGTTCGCCTGGGTTAGAGAATCTTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCGCATGGCTTCCAGAAGACGTCCAGAGCAGCCTCAGGGAATCCAGGGAATCCGGAGGGAAAAGCTTCTaGAAGCAGTGTTGGTGCACT | + |
|
Preference number: 2 (lower is better) Translates to: SAWLPEDVQSSLRESRESGGKSF*KQCWCT Trigger: AGTGCACCAACACTGCTTGCAGAAGCTTTTCCCTCC...GGATTCCCTGGATTCCCTGAGGCTGCTCTGGACGTCTTCTGGAAGCCATGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGAGATGGCTCAGTGATTAAGGGCTATGCTGCTCTTGCAGAGGACCCAGGTCCTCTGCCTCCCAAGTaGTGGGATCAAAGGCATGCG | + |
|
Preference number: 2 (lower is better) Translates to: WRDGSVIKGYAALAEDPGPLPPK*WDQRHA Trigger: CGCATGCCTTTGATCCCAGCACTTGGGAGGCAGAGG...ACCTGGGTCCTCTGCAAGAGCAGCATAGCCCTTAATCACTGAGCCATCTCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR CCA 90 bp | CGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTGGTTCCTTCAGGACCAGGGCTAACAAGCATGTGCTaGGGACAGAGGGGATTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: RREGSVVQSTLLVPSGPGLTSMC*GQRGLD Trigger: ATCCAATCCCCTCTGTCCCCAGCACATGCTTGTTAG...CCCTGGTCCTGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR CCA 90 bp | CTTGCTGCTGAGCCTGCTCTGCATACAGCTGAGACTGTAAGTTTCGCAGCTCCTAGCGGCACACCGAGCTaGATATGGTCTCCCTTACGG | + |
|
Preference number: 2 (lower is better) Translates to: LAAEPALHTAETVSFAAPSGTPS*IWSPLR Trigger: CCGTAAGGGAGACCATATCCAGCTCGGTGTGCCGCT...AGGAGCTGCGAAACTTACAGTCTCAGCTGTATGCAGAGCAGGCTCAGCAGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR CAA 90 bp | GCCTCTGATGATACACGTGCAGAAGTGTTGGCTGGTTTAAGAGGTTaGGGGCCGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: ASDDTRAEVLAGLRG*GPERGLSGSEHSLG Trigger: ACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCGGCCCCAAACCTCTTAAACCAGCCAACACTTCTGCACGTGTATCATCAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTCCTGCATCTGTGTTTTCAGCTTCAGCATCCTGGACATGGTCACCTTAAAGCAGCAGGGCCTGCATaGCGGAAGGCCAGTGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: LLLHLCFQLQHPGHGHLKAAGPA*RKASGT Trigger: TGTGCCACTGGCCTTCCGTCATGCAGGCCCTGCTGC...TTTAAGGTGACCATGTCCAGGATGCTGAAGCTGAAAACACAGATGCAGGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR CCA 90 bp | CACAGACTTCCTAACTCAGTCTCTGCAGCGCATGGCTTCCAGAAGACGTCCAGACTGCCAGTGTTTACCTaGGAGACTGTGAGGGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: HRLPNSVSAAHGFQKTSRLPVFT*ETVREW Trigger: CCACTCCCTCACAGTCTCCCAGGTAAACACTGGCAG...TCTGGACGTCTTCTGGAAGCCATGCGCTGCAGAGACTGAGTTAGGAAGTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGAGATGGCTCAGTGATTAAGGGCTATGCTGCTCTTGCAGAGGACCCAGGTAGGAAGGAAAACCTCTaGGACTCACTGGCAGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: WRDGSVIKGYAALAEDPGRKENL*DSLAAR Trigger: CCTGGCTGCCAGTGAGTCCCAGAGGTTTTCCTTCCT...ACCTGGGTCCTCTGCAAGAGCAGCATAGCCCTTAATCACTGAGCCATCTCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR TCA 90 bp | CTAACTCAGTCTCTGCAGCGCATGGCTTCCAGAAGACGTCCAGAGCAGCCTCAGAGTTCTAAGCTGTTCTaGGATGCTGATGGTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LTQSLQRMASRRRPEQPQSSKLF*DADGLQ Trigger: CTGCAGACCATCAGCATCTCAGAACAGCTTAGAACT...CTGAGGCTGCTCTGGACGTCTTCTGGAAGCCATGCGCTGCAGAGACTGAGTTAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGTTGGTTCTGGACTCAATGTCCTTTCGACAAATGGGACACTCTACTTTCCGTGGTAGCAGCAGGGCCTaGATGACGGAAGGCCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: ELVLDSMSFRQMGHSTFRGSSRA*MTEGQW Trigger: CCACTGGCCTTCCGTCATGCAGGCCCTGCTGCTACC...ACGGAAAGTAGAGTGTCCCATTTGTCGAAAGGACATTGAGTCCAGAACCAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGACTTCCTAACTCAGTCTCTGCAGCGCATGGCTTCCAGAAGACGTCCAGAACCAGGCTCTCAAAATaGAGGCCACCTTCCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: HRLPNSVSAAHGFQKTSRTRLSK*RPPSTQ Trigger: CTGTGTGGAAGGTGGCCTGCATTTTGAGAGCCTGGT...TCTGGACGTCTTCTGGAAGCCATGCGCTGCAGAGACTGAGTTAGGAAGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024817.15 ENSMUST00000234362.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCACTGGAGCTCGTTCTCCAGCAAGTCGTTCATGTGGCTGAGAACCTCCTCCGGTCTGCAGGCCTTCTaGTTCTTAGGACAACTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: MHWSSFSSKSFMWLRTSSGLQAF*FLGQLS Trigger: ACTCAGTTGTCCTAAGAAGCAGAAGGCCTGCAGACC...GGAGGAGGTTCTCAGCCACATGAACGACTTGCTGGAGAACGAGCTCCAGTGCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR-3UTR CCA 90 bp | CGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTGGTTCCTTCAGGACCAGGGTATAGTGACTACCTCTaGCCTAGTGACTCACTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: RREGSVVQSTLLVPSGPGYSDYL*PSDSLC Trigger: GCAAAGTGAGTCACTAGGCCAGAGGTAGTCACTATA...CCCTGGTCCTGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR GCA 90 bp | CACTGGAGCTCGTTCTCCAGCAAGTCGTTCATGTGGCTGAGAACCTCCTCCTTCGGTCTCCCTTACGGATaGAATAACCCTGTAATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HWSSFSSKSFMWLRTSSFGLPYG*NNPVMV Trigger: CACCATTACAGGGTTATTGCATCCGTAAGGGAGACC...GAAGGAGGAGGTTCTCAGCCACATGAACGACTTGCTGGAGAACGAGCTCCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCATAAAAAGGTAAACCAGGCTCTCAAAATGCAGGCCACCTTCCACACAGCCTCTCAGGCTGAGGGCTaGTGGCAGTCTATCAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: FHKKVNQALKMQATFHTASQAEG*WQSIRD Trigger: GTCCCTGATAGACTGCCAGCAGCCCTCAGCCTGAGA...GGCTGTGTGGAAGGTGGCCTGCATTTTGAGAGCCTGGTTTACCTTTTTATGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR GCA 90 bp | GTTTGGGGCCGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTGGTTCCTTCAGTTCTCATTAATCATTaGTTGCCCATGAGACTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VWGRREGSVVQSTLLVPSVLINH*LPMRLR Trigger: CCTCAGTCTCATGGGCAAGCAATGATTAATGAGAAC...TGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCGGCCCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR GCA 90 bp | GTCCAGAACCAGGGAGTTGGTTCTGGACTCAATGTCCTTTCGACAAATGGGACAAAAGTCTTCTCCAGCTaGTCCACTCTGGCTTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VQNQGVGSGLNVLSTNGTKVFSS*STLACC Trigger: GCAGCAAGCCAGAGTGGAGCAGCTGGAGAAGACTTT...TGTCCCATTTGTCGAAAGGACATTGAGTCCAGAACCAACTCCCTGGTTCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGAACCAGGGAGTTGGTTCTGGACTCAATGTCCTTTCGACAAATGGGACACTCAGGTCGCACTCTCCTTaGTCTTTCTCCAAACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QNQGVGSGLNVLSTNGTLRSHSP*SFSKPW Trigger: CCAGGGTTTGGAGAAAGAGCAAGGAGAGTGCGACCT...GAGTGTCCCATTTGTCGAAAGGACATTGAGTCCAGAACCAACTCCCTGGTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGAAACTGTGGGCACAGTTCAGGGTGACAGCCTCAATAAAGTACTCCGAGCAATGACGGAAGGCCAGTaGCACAGACTTCCTAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: AETVGTVQGDSLNKVLRAMTEGQ*HRLPNS Trigger: TGAGTTAGGAAGTCTGTGCCACTGGCCTTCCGTCAT...TGCTCGGAGTACTTTATTGAGGCTGTCACCCTGAACTGTGCCCACAGTTTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTCCACAATGATGTCAAGAGGGTGCATGAGGTATCAAAAACAATCAACAAAGGTCCCAGCACACGTTaGGGGGTGGTAGCAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: AVHNDVKRVHEVSKTINKGPSTR*GVVAAG Trigger: CCCTGCTGCTACCACCCCCCAACGTGTGCTGGGACC...TTTGTTGATTGTTTTTGATACCTCATGCACCCTCTTGACATCATTGTGGACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGGGGCCGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTGGTTCCTTCACATTATCATCATGCATaGCTGCTCACAACCACCTAT | + |
|
Preference number: 2 (lower is better) Translates to: VWGRREGSVVQSTLLVPSHYHHA*LLTTTY Trigger: ATAGGTGGTTGTGAGCAGCCATGCATGATGATAATG...TGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCGGCCCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 90 bp | CTCCAGCAAGTCGTTCATGTGGCTGAGAACCTCCTCCTTCTGCGCTaGCACCTTGTCCTTTTCTTCCTTGGTCTGCTCCAATTCTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LQQVVHVAENLLLLR*HLVLFFLGLLQFFV Trigger: AACAAAGAATTGGAGCAGACCAAGGAAGAAAAGGACAAGGTGCAAGCGCAGAAGGAGGAGGTTCTCAGCCACATGAACGACTTGCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR GCA 90 bp | GACTGTATGCAAACATACATCCCCATGCAACCATGTAAGACACATGCATGGGTAGGCATGCGCCACCACTaGCTGGCTGAGCTGTCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: DCMQTYIPMQPCKTHAWVGMRHH*LAELSY Trigger: ATAAGACAGCTCAGCCAGGCAGTGGTGGCGCATGCC...TACCCATGCATGTGTCTTACATGGTTGCATGGGGATGTATGTTTGCATACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 90 bp | TCCATCCTCACGATCTTCTTTGAGCTCCCCTTCCGAGTCTGTCTCTaGACGTTTAGGACAGCTATCTGCTTCTCCTGCATCTGTGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SILTIFFELPFRVCL*TFRTAICFSCICVF Trigger: GAAAACACAGATGCAGGAGAAGCAGATAGCTGTCCTAAACGTCAAGAGACAGACTCGGAAGGGGAGCTCAAAGAAGATCGTGAGGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTGGGAGGAGACAAAGGGCAAAGTCTCCCTCAGTTACACAGTTTGGGGCCATGTCAAGAGGGTGCATaGGGTATCAAAAACAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: EVGGDKGQSLPQLHSLGPCQEGA*GIKNNQ Trigger: TTGATTGTTTTTGATACCTCATGCACCCTCTTGACA...TGGCCCCAAACTGTGTAACTGAGGGAGACTTTGCCCTTTGTCTCCTCCCACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR TCA 90 bp | GACTGTATGCAAACATACATCCCCATGCAACCATGTAAGACACATGCATGGGTATTACCTGGGAGACTGTaGGGGAGTGGGAGACAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: DCMQTYIPMQPCKTHAWVLPGRL*GSGRQR Trigger: CCTTTGTCTCCCACTCCCTCACAGTCTCCCAGGTAA...TACCCATGCATGTGTCTTACATGGTTGCATGGGGATGTATGTTTGCATACAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR CCA 90 bp | AGTTGTCCAGAACCAGGGAGTTGGTTCTGGACTCAATGTCCTTTCGACAAATGGATGACGGAAGGCCAGTaGCACAGACTTCCTAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: SCPEPGSWFWTQCPFDKWMTEGQ*HRLPNS Trigger: TGAGTTAGGAAGTCTGTGCCACTGGCCTTCCGTCAT...CCATTTGTCGAAAGGACATTGAGTCCAGAACCAACTCCCTGGTTCTGGACAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CAA 90 bp | TGTGATGGGAAGGCTTTGCATCACCACTACAGGAACAGGTTCCTCTaGTTCTCATCAGTTAACACTGGTGACACACAAACTGGCACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: CDGKALHHHYRNRFL*FSSVNTGDTQTGTV Trigger: AACTGTGCCAGTTTGTGTGTCACCAGTGTTAACTGATGAGAACAAGAGGAACCTGTTCCTGTAGTGGTGATGCAAAGCCTTCCCATCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 90 bp | TCCTTCACGTCTGAGCTTAGGTTATCCACCATCTTACTAATGCAGTaGTCCAGAACCAGGGAGTTGGTTCTGGACTCAATGTCCTTTCGA | + |
|
Preference number: 2 (lower is better) Translates to: SFTSELRLSTILLMQ*SRTRELVLDSMSFR Trigger: TCGAAAGGACATTGAGTCCAGAACCAACTCCCTGGTTCTGGACAACTGCATTAGTAAGATGGTGGATAACCTAAGCTCAGACGTGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR TCA 90 bp | TCACACCCAGCTGTCCACAATGATGTCAAGAGGGTGCATGAGGTATCAAAAACAAGTTCTAAGCTGTTCTaGGATGCTGATGGTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SHPAVHNDVKRVHEVSKTSSKLF*DADGLQ Trigger: CTGCAGACCATCAGCATCTCAGAACAGCTTAGAACT...TGTTTTTGATACCTCATGCACCCTCTTGACATCATTGTGGACAGCTGGGTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCCACAATGATGTCAAGAGGGTGCATGAGGTATCAAAAACAATCAACAAATACTCTGGCTTGCTGCTaGGCCTGCTCTGCATACAGC | + |
|
Preference number: 2 (lower is better) Translates to: LSTMMSRGCMRYQKQSTNTLACC*ACSAYS Trigger: GCTGTATGCAGAGCAGGCTCAGCAGCAAGCCAGAGT...ATTTGTTGATTGTTTTTGATACCTCATGCACCCTCTTGACATCATTGTGGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGTCCACAATGATGTCAAGAGGGTGCATGAGGTATCAAAAACAATCAACAAAAGTCGTTCATGTGGCTaGGAACCTCCTCCTTCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: AVHNDVKRVHEVSKTINKSRSCG*EPPPSA Trigger: CGCAGAAGGAGGAGGTTCTCAGCCACATGAACGACT...TTTGTTGATTGTTTTTGATACCTCATGCACCCTCTTGACATCATTGTGGACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGACTCAATGTCCTTTCGACAAATGGGACACTCTACTTTCCGTTTCATCCATACCCTGGAGGTAATGTaGCTCCTCCTGGAAAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LDSMSFRQMGHSTFRFIHTLEVM*LLLESL Trigger: AAGACTTTCCAGGAGGAGGCACATTACCTCCAGGGT...ATGGATGAAACGGAAAGTAGAGTGTCCCATTTGTCGAAAGGACATTGAGTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTCTCTTTGCTCTCCGTTCCCTAATAAGGACACTTCTTCTTTCCTTCACGTCTACCCTGGAGGTAATGTaGCTCCTCCTGGAAAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SLFALRSLIRTLLLSFTSTLEVM*LLLESL Trigger: AAGACTTTCCAGGAGGAGGCACATTACCTCCAGGGT...AGACGTGAAGGAAAGAAGAAGTGTCCTTATTAGGGAACGGAGAGCAAAGAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGACTCAATGTCCTTTCGACAAATGGGACACTCTACTTTCCGTTTCATCCAGCCATGCAACTTCTCTaGCTCAATGGGTTTACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SGLNVLSTNGTLYFPFHPAMQLL*LNGFTG Trigger: GCCAGTAAACCCATTGAGCCAGAGAAGTTGCATGGC...TGGATGAAACGGAAAGTAGAGTGTCCCATTTGTCGAAAGGACATTGAGTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR CAA 90 bp | TCCTTTCGACAAATGGGACACTCTACTTTCCGTTTCATCCATTCATaGATACAGAAGGAGCAGAAACTGTGGGCACAGTTCAGGGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: SFRQMGHSTFRFIHS*IQKEQKLWAQFRVT Trigger: TGTCACCCTGAACTGTGCCCACAGTTTCTGCTCCTTCTGTATCAATGAATGGATGAAACGGAAAGTAGAGTGTCCCATTTGTCGAAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CAA 90 bp | AGGTTATCCACCATCTTACTAATGCAGTTGTCCAGAACCAGGGAGTaGGTTCTGGACTCAATGTCCTTTCGACAAATGGGACACTCTACT | + |
|
Preference number: 2 (lower is better) Translates to: RLSTILLMQLSRTRE*VLDSMSFRQMGHST Trigger: AGTAGAGTGTCCCATTTGTCGAAAGGACATTGAGTCCAGAACCAACTCCCTGGTTCTGGACAACTGCATTAGTAAGATGGTGGATAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTGAGCTGTCTTATTCTAATTGGTGTATCAAGTAACCTTTTCAGGCATTGGCCACACTCCCCAGAATaGAAACAACACCAAGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: WLSCLILIGVSSNLFRHWPHSPE*KQHQEP Trigger: GGGCTCTTGGTGTTGTTTTCATTCTGGGGAGTGTGG...CCAATGCCTGAAAAGGTTACTTGATACACCAATTAGAATAAGACAGCTCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR TCA 90 bp | ATGTCCTTTCGACAAATGGGACACTCTACTTTCCGTTTCATCCATTCATTGATAAGTCGTTCATGTGGCTaGGAACCTCCTCCTTCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: MSFRQMGHSTFRFIHSLISRSCG*EPPPSA Trigger: CGCAGAAGGAGGAGGTTCTCAGCCACATGAACGACT...TATCAATGAATGGATGAAACGGAAAGTAGAGTGTCCCATTTGTCGAAAGGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTGAGCTGTCTTATTCTAATTGGTGTATCAAGTAACCTTTTCAGGCATTGGCCTAGTGACTCACTTTaGTTGCCCCCAAGGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: WLSCLILIGVSSNLFRHWPSDSL*LPPRWV Trigger: AACCCACCTTGGGGGCAAGCAAAGTGAGTCACTAGG...CCAATGCCTGAAAAGGTTACTTGATACACCAATTAGAATAAGACAGCTCAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR TCA 90 bp | GAGTTGGTTCTGGACTCAATGTCCTTTCGACAAATGGGACACTCTACTTTCCGTTGTCAAGAGGGTGCATaGGGTATCAAAAACAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: ELVLDSMSFRQMGHSTFRCQEGA*GIKNNQ Trigger: TTGATTGTTTTTGATACCTCATGCACCCTCTTGACA...ACGGAAAGTAGAGTGTCCCATTTGTCGAAAGGACATTGAGTCCAGAACCAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR TCA 90 bp | TCACACCCAGCTGTCCACAATGATGTCAAGAGGGTGCATGAGGTATCAAAAACAGCCCAGCTGAGCAACTaGGAGTTTTATACATTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: SHPAVHNDVKRVHEVSKTAQLSN*EFYTFY Trigger: ATAAAATGTATAAAACTCTCAGTTGCTCAGCTGGGC...TGTTTTTGATACCTCATGCACCCTCTTGACATCATTGTGGACAGCTGGGTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR TCA 90 bp | GGGACACTCTACTTTCCGTTTCATCCATTCATTGATACAGAAGGAGCAGAAACTCCCAGTCTTCTTCAATaGCTTCGTATTCATACTCCG | + |
|
Preference number: 2 (lower is better) Translates to: GTLYFPFHPFIDTEGAETPSLLQ*LRIHTP Trigger: CGGAGTATGAATACGAAGTCATTGAAGAAGACTGGG...AGTTTCTGCTCCTTCTGTATCAATGAATGGATGAAACGGAAAGTAGAGTGTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCCACAATGATGTCAAGAGGGTGCATGAGGTATCAAAAACAATCAACAAATGAGACTGTGAGGGAGTaGGAGACAAAGGAAAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: LSTMMSRGCMRYQKQSTNETVRE*ETKESK Trigger: TTTACTTTCCTTTGTCTCCCACTCCCTCACAGTCTC...ATTTGTTGATTGTTTTTGATACCTCATGCACCCTCTTGACATCATTGTGGACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 90 bp | TTGGTCAGCAAAGCAATAGTACATTTTGAACTTATGGGTCAGCTGTaGATGTGCCAGAAAACTTTGTCAGCAAGGTTAAGGCAGTTATGT | + |
|
Preference number: 2 (lower is better) Translates to: LVSKAIVHFELMGQL*MCQKTLSARLRQLC Trigger: ACATAACTGCCTTAACCTTGCTGACAAAGTTTTCTGGCACATCAACAGCTGACCCATAAGTTCAAAATGTACTATTGCTTTGCTGACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 90 bp | CCTTGCAAGTCTTTACTACTGTTGTTCTTCCATAGTTCCCAAACATaGGCAGGGTATACAGAACTAAAAATAGAAGGGTTGAGATCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PCKSLLLLFFHSSQT*AGYTELKIEGLRSE Trigger: CTCTGATCTCAACCCTTCTATTTTTAGTTCTGTATACCCTGCCAATGTTTGGGAACTATGGAAGAACAACAGTAGTAAAGACTTGCAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 90 bp | TCCCAGAAATGTTACAATGTAGCTCCTTGCAAGTCTTTACTACTGTaGTTCTTCCATAGTTCCCAAACATTGGCAGGGTATACAGAACTA | + |
|
Preference number: 2 (lower is better) Translates to: SQKCYNVAPCKSLLL*FFHSSQTLAGYTEL Trigger: TAGTTCTGTATACCCTGCCAATGTTTGGGAACTATGGAAGAACAACAGTAGTAAAGACTTGCAAGGAGCTACATTGTAACATTTCTGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR CCA 90 bp | ATGTCCTTTCGACAAATGGGACACTCTACTTTCCGTTTCATCCATTCATTGATATGTCCTTTTCTTCCTTaGTCTGCTCCAATTCTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: MSFRQMGHSTFRFIHSLICPFLP*SAPILC Trigger: ACAAAGAATTGGAGCAGACCAAGGAAGAAAAGGACA...TATCAATGAATGGATGAAACGGAAAGTAGAGTGTCCCATTTGTCGAAAGGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CCA 72 bp | GCGGCCCTGAACTTGAGCTCTCAGGCTGAGGGCTGCTaGCAGTCTATCAGGGACAGTGACTCTCCTGACGGC | + |
|
Preference number: 3 (lower is better) Translates to: AALNLSSQAEGC*QSIRDSDSPDG Trigger: GCCGTCAGGAGAGTCACTGTCCCTGATAGACTGCCAGCAGCCCTCAGCCTGAGAGCTCAAGTTCAGGGCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR GCA 72 bp | GGTGCGGCCCTGAACTTGAGCTCTCAGGCTGAGGGCTaGTGGCAGTCTATCAGGGACAGTGACTCTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GAALNLSSQAEG*WQSIRDSDSPD Trigger: GTCAGGAGAGTCACTGTCCCTGATAGACTGCCAGCAGCCCTCAGCCTGAGAGCTCAAGTTCAGGGCCGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR TCA 72 bp | CTGAGTTCCAGGACCTTTGGAAGAGCAGAGCAAGCATaGGGCCCGGCGGCCCTCTCACTCGCCTTCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSSRTFGRAEQA*GPAALSLAFRE Trigger: TTCTCTGAAGGCGAGTGAGAGGGCCGCCGGGCCTCATGCTTGCTCTGCTCTTCCAAAGGTCCTGGAACTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR CCA 72 bp | GCGCCACCATGCCCGGCTGAGCTGCCAGTGTTTACCTaGGAGACTGTGAGGGAGTGGGAGACAAAGGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: APPCPAELPVFT*ETVREWETKES Trigger: ACTTTCCTTTGTCTCCCACTCCCTCACAGTCTCCCAGGTAAACACTGGCAGCTCAGCCGGGCATGGTGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | CTGGGAGGCAGAGGAAGGAAAACCTCTGGGACTCACTaGCAGCCAGGCCTACTTGGCAAGCTCCAGGCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LGGRGRKTSGTH*QPGLLGKLQAN Trigger: ATTAGCCTGGAGCTTGCCAAGTAGGCCTGGCTGCCAGTGAGTCCCAGAGGTTTTCCTTCCTCTGCCTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | CCTCCTCCTGGAAAGTCTTCTCCAGCTGCTCCACTCTaGCTTGCTGCTGAGCCTGCTCTGCATACAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PPPGKSSPAAPL*LAAEPALHTAE Trigger: CTCAGCTGTATGCAGAGCAGGCTCAGCAGCAAGCCAGAGTGGAGCAGCTGGAGAAGACTTTCCAGGAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR TCA 72 bp | AACAGGGAAAGCAGTGACACCCCACACTCCCCAGAATaGAAACAACACCAAGAGCCCACCAGGTGCGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: NRESSDTPHSPE*KQHQEPTRCGP Trigger: AGGGCCGCACCTGGTGGGCTCTTGGTGTTGTTTTCATTCTGGGGAGTGTGGGGTGTCACTGCTTTCCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | CTTCTGCTTCTTAGGACAACTGAGTTCCAGGACCTTTaGAAGAGCAGAGCAAGCATGAGGCCCGGCGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLLLRTTEFQDL*KSRASMRPGGP Trigger: AGGGCCGCCGGGCCTCATGCTTGCTCTGCTCTTCCAAAGGTCCTGGAACTCAGTTGTCCTAAGAAGCAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGTCCAGAGCAGCCTCAGGGAATCCAGGGAATCCTCTAGAACAAGCCAAGCCGTCCTCACGATCTTCTTaGAGCTCCCCTTCCGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TSRAASGNPGNPLEQAKPSSRSS*SSPSES Trigger: AGACTCGGAAGGGGAGCTCAAAGAAGATCGTGAGGA...CGGCTTGGCTTGTTCTAGAGGATTCCCTGGATTCCCTGAGGCTGCTCTGGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR TCA 72 bp | ACTGGAGCTCGTTCTCCAGCAAGTCGTTCATGTGGCTaGGAACCTCCTCCTTCTGCGCTTGCACCTTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TGARSPASRSCG*EPPPSALAPCP Trigger: AGGACAAGGTGCAAGCGCAGAAGGAGGAGGTTCTCAGCCACATGAACGACTTGCTGGAGAACGAGCTCCAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR GCA 72 bp | CAAGCCGCCATCGCCCTAGAGTCTCTCACATGTCCTTaGAGCGTGACCTTCATGACAGTCTCTTTGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QAAIALESLTCP*SVTFMTVSLLS Trigger: GGAGAGCAAAGAGACTGTCATGAAGGTCACGCTGCAAGGACATGTGAGAGACTCTAGGGCGATGGCGGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCGCATGGCTTCCAGAAGACGTCCAGAGCAGCCTCAGGGAATCCAGGGAATCCGTTGCTACTGAACTATaGACCTTGCTTACATGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SAWLPEDVQSSLRESRESVATEL*TLLTWG Trigger: CCCCCATGTAAGCAAGGTCAATAGTTCAGTAGCAAC...GGATTCCCTGGATTCCCTGAGGCTGCTCTGGACGTCTTCTGGAAGCCATGCGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR TCA 72 bp | TGTGCTGGGGACAGAGGGGATTGGATGCTCGATGTGTaGTGGGAAGGCTTTGCATCACCACTACAGGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: CAGDRGDWMLDV*WEGFASPLQEQ Trigger: CTGTTCCTGTAGTGGTGATGCAAAGCCTTCCCATCACACATCGAGCATCCAATCCCCTCTGTCCCCAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR GCA 72 bp | GCTAACAAGCATGTGCTGGGGACAGAGGGGATTGGATaGTCGATGTGTGATGGGAAGGCTTTGCATCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: ANKHVLGTEGIG*SMCDGKALHHH Trigger: GTGGTGATGCAAAGCCTTCCCATCACACATCGAGCATCCAATCCCCTCTGTCCCCAGCACATGCTTGTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR GCA 72 bp | AGTCCGATCCTCAGAAACAATCTGATTCCCGCATGGTaGCTAACTAAAACCCTGGGAGGCACTGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPILRNNLIPAW*LTKTLGGTGRQ Trigger: CTGCCTCCCAGTGCCTCCCAGGGTTTTAGTTAGGCACCATGCGGGAATCAGATTGTTTCTGAGGATCGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | CCAAGTCCGATCCTCAGAAACAATCTGATTCCCGCATaGTGCCTAACTAAAACCCTGGGAGGCACTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSPILRNNLIPA*CLTKTLGGTGR Trigger: CCTCCCAGTGCCTCCCAGGGTTTTAGTTAGGCACCATGCGGGAATCAGATTGTTTCTGAGGATCGGACTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | GCCGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTaGTTCCTTCAGGACCAGGGCATTATCATCATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: AGERAQWFRALS*FLQDQGIIIMH Trigger: ATGCATGATGATAATGCCCTGGTCCTGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR CAA 90 bp | TTTCATAAAAAGGTAAACCAGGCTCTCAAAATGCAGGCCACCTTCCACACAGCCGGCCTGCACCAGCTGTaGCTTCAGGTCGCACTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FHKKVNQALKMQATFHTAGLHQL*LQVALS Trigger: GGAGAGTGCGACCTGAAGCAACAGCTGGTGCAGGCC...GGCTGTGTGGAAGGTGGCCTGCATTTTGAGAGCCTGGTTTACCTTTTTATGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234362.2 |
||
| 3UTR TCA 72 bp | CAAGGCAGGGAGCCAGACTCTCCCAGTCTTCTTCAATaGCTTCGTATTCATACTCCGCCGTCTCCCTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QGREPDSPSLLQ*LRIHTPPSPCF Trigger: AAAGCAGGGAGACGGCGGAGTATGAATACGAAGTCATTGAAGAAGACTGGGAGAGTCTGGCTCCCTGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR GCA 72 bp | ACATGGTGGCTCACAAGCAGCTGTAATGGGATCCGATaGCCTCTTCTGGTGTGTCTGAAGTCAGCTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TWWLTSSCNGIR*PLLVCLKSATV Trigger: CACTGTAGCTGACTTCAGACACACCAGAAGAGGGCATCGGATCCCATTACAGCTGCTTGTGAGCCACCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR GCA 72 bp | CCTATAAACTGTCCCAGGGCAGCTGGTGCCTTCTCTTaGTTCTGTGGGGCCCTGCATATAGTATACATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PINCPRAAGAFS*FCGALHIVYMA Trigger: AGCCATGTATACTATATGCAGGGCCCCACAGAAGCAAGAGAAGGCACCAGCTGCCCTGGGACAGTTTATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | CACTGCAACCGTACGAGTTTTATTATCCCAACATACTaGGGACTCCCCCTCTCAGGACACAGGCCAGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HCNRTSFIIPTY*GLPLSGHRPEK Trigger: CTTCTCTGGCCTGTGTCCTGAGAGGGGGAGTCCCCAGTATGTTGGGATAATAAAACTCGTACGGTTGCAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | CTGACTCGATGCGTCACCTTTGCCATGCAACTTCTCTaGCTCAATGGGTTTACTGGCGACATTAGCCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LTRCVTFAMQLL*LNGFTGDISQW Trigger: CCACTGGCTAATGTCGCCAGTAAACCCATTGAGCCAGAGAAGTTGCATGGCAAAGGTGACGCATCGAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCACAGTTCAGGGTGACAGCCTCAATAAAGTACTCCGAGCAGATAATGCACTGCAGGTCGCACTCTCCTaGCTCTTTCTCCAAACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GTVQGDSLNKVLRADNALQVALS*LFLQTL Trigger: CAGGGTTTGGAGAAAGAGCAAGGAGAGTGCGACCTG...CAGTGCATTATCTGCTCGGAGTACTTTATTGAGGCTGTCACCCTGAACTGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGAGATGGCTCAGTGATTAAGGGCTATGCTGCTCTTGCAGAGGACCCAGGTGCAGTGTTGGTGCACTaGAGCCAAACTAAGAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: WRDGSVIKGYAALAEDPGAVLVH*SQTKNS Trigger: ACTGTTCTTAGTTTGGCTCAAGTGCACCAACACTGC...ACCTGGGTCCTCTGCAAGAGCAGCATAGCCCTTAATCACTGAGCCATCTCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR GCA 72 bp | ACAAGCATCCCAAGGACTGACTCGATGCGTCACCTTTaGCATGCAACTTCTCTGGCTCAATGGGTTTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: TSIPRTDSMRHL*HATSLAQWVYW Trigger: CCAGTAAACCCATTGAGCCAGAGAAGTTGCATGGCAAAGGTGACGCATCGAGTCAGTCCTTGGGATGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR CCA 72 bp | ACCTTTTCAGGCATTGGTTTGTATAGTGACTACCTCTaGCCTAGTGACTCACTTTGCTTGCCCCCAAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TFSGIGLYSDYL*PSDSLCLPPRW Trigger: CCACCTTGGGGGCAAGCAAAGTGAGTCACTAGGCCAGAGGTAGTCACTATACAAACCAATGCCTGAAAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | ATTAAGAGCACTGCCTGCTCTTCCAGAGGTCCTTGTTaGAGTTCGTCAAGAGACCCTCACTCACAAAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: IKSTACSSRGPC*SSSRDPHSQRP Trigger: TGGTCTTTGTGAGTGAGGGTCTCTTGACGAACTCCAACAAGGACCTCTGGAAGAGCAGGCAGTGCTCTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | ACAGCCTCAATAAAGTACTCCGAGCAGATAATGCACTaGAGCTCGTTCTCCAGCAAGTCGTTCATGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TASIKYSEQIMH*SSFSSKSFMWL Trigger: CAGCCACATGAACGACTTGCTGGAGAACGAGCTCCAGTGCATTATCTGCTCGGAGTACTTTATTGAGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR TCA 72 bp | AATCTCTGCACTCAGGTAACTAGGCAGGTGGATCTCTaGATTCAAGGTCAGCCTGGGCTACATAGTTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: NLCTQVTRQVDL*IQGQPGLHSWF Trigger: GAACCAACTATGTAGCCCAGGCTGACCTTGAATTCAGAGATCCACCTGCCTAGTTACCTGAGTGCAGAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR TCA 72 bp | TGCTCTTGCAGAGGACCCAGGTTCAGGTCCCAGTACTaGCATGGTAGCTCACAATTGTCTGTAACTCTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CSCRGPRFRSQY*HGSSQLSVTLV Trigger: AACTAGAGTTACAGACAATTGTGAGCTACCATGTCAGTACTGGGACCTGAACCTGGGTCCTCTGCAAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR GCA 72 bp | CGTCAAGAGACCCTCACTCACAAAGACCACAGAGACTaGCATCACTGCAACCGTACGAGTTTTATTATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RQETLTHKDHRD*HHCNRTSFIIP Trigger: TGGGATAATAAAACTCGTACGGTTGCAGTGATGGCAGTCTCTGTGGTCTTTGTGAGTGAGGGTCTCTTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | GGCATTTATTCACAAATAAGCCTCAGCGTCGTTATTTaGGAACTGGGATCCAGGGAGACAAGCCCGCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GIYSQISLSVVI*ELGSRETSPQL Trigger: TAACTGCGGGCTTGTCTCCCTGGATCCCAGTTCCCAAATAACGACGCTGAGGCTTATTTGTGAATAAATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGAGATGGCTCAGTGATTAAGGGCTATGCTGCTCTTGCAGAGGACCCAGGTAAGTCTTTACTACTGTaGTTCTTCCATAGTTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: WRDGSVIKGYAALAEDPGKSLLL*FFHSSQ Trigger: TTGGGAACTATGGAAGAACAACAGTAGTAAAGACTT...ACCTGGGTCCTCTGCAAGAGCAGCATAGCCCTTAATCACTGAGCCATCTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR TCA 72 bp | CTGGACATGGTCACCTTAAACAGTTCTAAGCTGTTCTaGGATGCTGATGGTCTGCAGGCCTTCTGCTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LDMVTLNSSKLF*DADGLQAFCFL Trigger: TAAGAAGCAGAAGGCCTGCAGACCATCAGCATCTCAGAACAGCTTAGAACTGTTTAAGGTGACCATGTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| 3UTR GCA 72 bp | ACCCTCACTCACAAAGACCACAGAGACTGCCATCACTaGAACCGTACGAGTTTTATTATCCCAACATACTGG | + |
|
Preference number: 3 (lower is better) Translates to: TLTHKDHRDCHH*NRTSFIIPTYW Trigger: CCAGTATGTTGGGATAATAAAACTCGTACGGTTGCAGTGATGGCAGTCTCTGTGGTCTTTGTGAGTGAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | TGTGTTGTGAGCTTTAAAAATATAAGCGACAGGGGCTaGAGAGATGGCTCAGTGATTAAGGGCTATGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CVVSFKNISDRG*RDGSVIKGYAA Trigger: AGCAGCATAGCCCTTAATCACTGAGCCATCTCTCCAGCCCCTGTCGCTTATATTTTTAAAGCTCACAACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR TCA 72 bp | GGAGCAGGAAGCTGTTACACAGGAATAATACGGCAGTaGGAGCTTCTGTTTTCCACTTTCCCAGAAATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GAGSCYTGIIRQ*ELLFSTFPEML Trigger: TAACATTTCTGGGAAAGTGGAAAACAGAAGCTCTCACTGCCGTATTATTCCTGTGTAACAGCTTCCTGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | ACATACATCCCCATGCAACCATGTAAGACACATGCATaGGTAAGGAGCAGGAAGCTGTTACACAGGAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: TYIPMQPCKTHA*VRSRKLLHRNN Trigger: ATTATTCCTGTGTAACAGCTTCCTGCTCCTTACCCATGCATGTGTCTTACATGGTTGCATGGGGATGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | TTCATCCATTCATTGATACAGAAGGAGCAGAAACTGTaGGCACAGTTCAGGGTGACAGCCTCAATAAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: FIHSLIQKEQKL*AQFRVTASIKY Trigger: GTACTTTATTGAGGCTGTCACCCTGAACTGTGCCCACAGTTTCTGCTCCTTCTGTATCAATGAATGGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR TCA 72 bp | TTTCCAAGGACTGTGAGCTGTGTTATAGCTAATTTTTaGGAACAGCTAACCTTGCTCCAGCAGCTATGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FPRTVSCVIANF*EQLTLLQQLWS Trigger: TGACCATAGCTGCTGGAGCAAGGTTAGCTGTTCTCAAAAATTAGCTATAACACAGCTCACAGTCCTTGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR TCA 72 bp | TTAAGGCAGTTATGTGGTTTATCTCAGATTTCAAACTaGGGCAGGGTTTCCAAGGACTGTGAGCTGTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: LRQLCGLSQISN*GRVSKDCELCY Trigger: ATAACACAGCTCACAGTCCTTGGAAACCCTGCCTCAGTTTGAAATCTGAGATAAACCACATAACTGCCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CCA 72 bp | CCAGAAAACTTTGTCAGCAAGGTTAAGGCAGTTATGTaGTTTATCTCAGATTTCAAACTGAGGCAGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PENFVSKVKAVM*FISDFKLRQGF Trigger: GAAACCCTGCCTCAGTTTGAAATCTGAGATAAACCACATAACTGCCTTAACCTTGCTGACAAAGTTTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR GCA 72 bp | ATAGTACATTTTGAACTTATGGGTCAGCTGTTGATGTaGCAGAAAACTTTGTCAGCAAGGTTAAGGCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: IVHFELMGQLLM*QKTLSARLRQL Trigger: TAACTGCCTTAACCTTGCTGACAAAGTTTTCTGGCACATCAACAGCTGACCCATAAGTTCAAAATGTACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CCA 90 bp | AGCGCATGGCTTCCAGAAGACGTCCAGAGCAGCCTCAGGGAATCCAGGGAATCCCCAGCTGCTCCACTCTaGCTTGCTGCTGAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAWLPEDVQSSLRESRESPAAPL*LAAEPA Trigger: AGCAGGCTCAGCAGCAAGCCAGAGTGGAGCAGCTGG...GGATTCCCTGGATTCCCTGAGGCTGCTCTGGACGTCTTCTGGAAGCCATGCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | AACAACACCAAGAGCCCACCAGGTGCGGCCCTGAACTaGAGCTCTCAGGCTGAGGGCTGCTGGCAGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: NNTKSPPGAALN*SSQAEGCWQSI Trigger: GATAGACTGCCAGCAGCCCTCAGCCTGAGAGCTCAAGTTCAGGGCCGCACCTGGTGGGCTCTTGGTGTTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CCA 90 bp | GTTTGGGGCCGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTGGTTCCTTCAAGCGGCACACCGAGCTaGATATGGTCTCCCTTACGG | + |
|
Preference number: 4 (lower is better) Translates to: VWGRREGSVVQSTLLVPSSGTPS*IWSPLR Trigger: CCGTAAGGGAGACCATATCCAGCTCGGTGTGCCGCT...TGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCGGCCCCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CCA 90 bp | GCGGCCCTGAACTTGAGCTCTCAGGCTGAGGGCTGCTGGCAGTCTATCAGGGACGCCATGCAACTTCTCTaGCTCAATGGGTTTACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AALNLSSQAEGCWQSIRDAMQLL*LNGFTG Trigger: GCCAGTAAACCCATTGAGCCAGAGAAGTTGCATGGC...GTCCCTGATAGACTGCCAGCAGCCCTCAGCCTGAGAGCTCAAGTTCAGGGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | CTCCTGGAAAGTCTTCTCCAGCTGCTCCACTCTGGCTaGCTGCTGAGCCTGCTCTGCATACAGCTGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLESLLQLLHSG*LLSLLCIQLRL Trigger: CAGTCTCAGCTGTATGCAGAGCAGGCTCAGCAGCAAGCCAGAGTGGAGCAGCTGGAGAAGACTTTCCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGAAGACGTCCAGAGCAGCCTCAGGGAATCCAGGGAATCCTCTAGAACAACTCTGGCTTGCTGCTaGGCCTGCTCTGCATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPEDVQSSLRESRESSRTTLACC*ACSAYS Trigger: GCTGTATGCAGAGCAGGCTCAGCAGCAAGCCAGAGT...TGTTCTAGAGGATTCCCTGGATTCCCTGAGGCTGCTCTGGACGTCTTCTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR GCA 90 bp | AGCGCATGGCTTCCAGAAGACGTCCAGAGCAGCCTCAGGGAATCCAGGGAATCCACCCTGGAGGTAATGTaGCTCCTCCTGGAAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SAWLPEDVQSSLRESRESTLEVM*LLLESL Trigger: AAGACTTTCCAGGAGGAGGCACATTACCTCCAGGGT...GGATTCCCTGGATTCCCTGAGGCTGCTCTGGACGTCTTCTGGAAGCCATGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | GGCCGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTaGGTTCCTTCAGGACCAGGGCATTATCATCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRREGSVVQSTL*VPSGPGHYHHA Trigger: TGCATGATGATAATGCCCTGGTCCTGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | GATACACGTGCAGAAGTGTTGGCTGGTTTAAGAGGTTaGGGGCCGGAGAGAGGGCTCAGTGGTTCAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DTRAEVLAGLRG*GPERGLSGSEH Trigger: GTGCTCTGAACCACTGAGCCCTCTCTCCGGCCCCAAACCTCTTAAACCAGCCAACACTTCTGCACGTGTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | CCAAGCCGCCATCGCCCTAGAGTCTCTCACATGTCCTaGCAGCGTGACCTTCATGACAGTCTCTTTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSRHRPRVSHMS*QRDLHDSLFAL Trigger: GAGAGCAAAGAGACTGTCATGAAGGTCACGCTGCAAGGACATGTGAGAGACTCTAGGGCGATGGCGGCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS-3UTR CCA 90 bp | GCGGCCCTGAACTTGAGCTCTCAGGCTGAGGGCTGCTGGCAGTCTATCAGGGACACCTTTGATATCAGCTaGTATGTGACACTAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AALNLSSQAEGCWQSIRDTFDIS*YVTLSP Trigger: GGGACTTAGTGTCACATACCAGCTGATATCAAAGGT...GTCCCTGATAGACTGCCAGCAGCCCTCAGCCTGAGAGCTCAAGTTCAGGGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CCA 90 bp | ACGTCCAGAGCAGCCTCAGGGAATCCAGGGAATCCTCTAGAACAAGCCAAGCCGAAGGAGCAGAAACTGTaGGCACAGTTCAGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TSRAASGNPGNPLEQAKPKEQKL*AQFRVT Trigger: TGTCACCCTGAACTGTGCCCACAGTTTCTGCTCCTT...CGGCTTGGCTTGTTCTAGAGGATTCCCTGGATTCCCTGAGGCTGCTCTGGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR GCA 90 bp | GTTTGGGGCCGGAGAGAGGGCTCAGTGGTTCAGAGCACTCTCTTGGTTCCTTCAGGTCTCCCTTACGGATaGAATAACCCTGTAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VWGRREGSVVQSTLLVPSGLPYG*NNPVMV Trigger: CACCATTACAGGGTTATTGCATCCGTAAGGGAGACC...TGAAGGAACCAAGAGAGTGCTCTGAACCACTGAGCCCTCTCTCCGGCCCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR GCA 90 bp | CACAGACTTCCTAACTCAGTCTCTGCAGCGCATGGCTTCCAGAAGACGTCCAGAAAAGTCTTCTCCAGCTaGTCCACTCTGGCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRLPNSVSAAHGFQKTSRKVFSS*STLACC Trigger: GCAGCAAGCCAGAGTGGAGCAGCTGGAGAAGACTTT...TCTGGACGTCTTCTGGAAGCCATGCGCTGCAGAGACTGAGTTAGGAAGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CCA 90 bp | GTCCAGAACCAGGGAGTTGGTTCTGGACTCAATGTCCTTTCGACAAATGGGACAAGCGGCACACCGAGCTaGATATGGTCTCCCTTACGG | + |
|
Preference number: 4 (lower is better) Translates to: VQNQGVGSGLNVLSTNGTSGTPS*IWSPLR Trigger: CCGTAAGGGAGACCATATCCAGCTCGGTGTGCCGCT...TGTCCCATTTGTCGAAAGGACATTGAGTCCAGAACCAACTCCCTGGTTCTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234362.2 |
||
| 3UTR CAA 72 bp | AACACGCTAACAAGCATGTGCTGGGGACAGAGGGGATaGGATGCTCGATGTGTGATGGGAAGGCTTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NTLTSMCWGQRG*DARCVMGRLCI Trigger: GATGCAAAGCCTTCCCATCACACATCGAGCATCCAATCCCCTCTGTCCCCAGCACATGCTTGTTAGCGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR GCA 90 bp | AACCCTGGAGGTAATGTGCCTCCTCCTGGAAAGTCTTCTCCAGCTGCTCCACTCGGTCTCCCTTACGGATaGAATAACCCTGTAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NPGGNVPPPGKSSPAAPLGLPYG*NNPVMV Trigger: CACCATTACAGGGTTATTGCATCCGTAAGGGAGACC...GAGTGGAGCAGCTGGAGAAGACTTTCCAGGAGGAGGCACATTACCTCCAGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234362.2 |
||
| CDS-3UTR TCA 90 bp | CACAGACTTCCTAACTCAGTCTCTGCAGCGCATGGCTTCCAGAAGACGTCCAGAAGTTCTAAGCTGTTCTaGGATGCTGATGGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRLPNSVSAAHGFQKTSRSSKLF*DADGLQ Trigger: CTGCAGACCATCAGCATCTCAGAACAGCTTAGAACT...TCTGGACGTCTTCTGGAAGCCATGCGCTGCAGAGACTGAGTTAGGAAGTCTGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | GGAGACAAAGGGCAAAGTCTCCCTCAGTTACACAGTTaGGGGCCAGCCTGGGCTACTTTAAATGGTCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDKGQSLPQLHS*GPAWATLNGLK Trigger: CTTGAGACCATTTAAAGTAGCCCAGGCTGGCCCCAAACTGTGTAACTGAGGGAGACTTTGCCCTTTGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR TCA 90 bp | CACAGACTTCCTAACTCAGTCTCTGCAGCGCATGGCTTCCAGAAGACGTCCAGACCCAGTCTTCTTCAATaGCTTCGTATTCATACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HRLPNSVSAAHGFQKTSRPSLLQ*LRIHTP Trigger: CGGAGTATGAATACGAAGTCATTGAAGAAGACTGGG...TCTGGACGTCTTCTGGAAGCCATGCGCTGCAGAGACTGAGTTAGGAAGTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024817.15 ENSMUST00000234362.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCCACAATGATGTCAAGAGGGTGCATGAGGTATCAAAAACAATCAACAAATAGAGCAGAGCAAGCATaGGGCCCGGCGGCCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSTMMSRGCMRYQKQSTNRAEQA*GPAALS Trigger: TGAGAGGGCCGCCGGGCCTCATGCTTGCTCTGCTCT...ATTTGTTGATTGTTTTTGATACCTCATGCACCCTCTTGACATCATTGTGGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR GCA 90 bp | CTTGCTGCTGAGCCTGCTCTGCATACAGCTGAGACTGTAAGTTTCGCAGCTCCTTCTCTCTCTTGCTGCTaGAAAACCTTCTGCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAAEPALHTAETVSFAAPSLSCC*KTFCLF Trigger: GAAAAGGCAGAAGGTTTTGCAGCAGCAAGAGAGAGA...AGGAGCTGCGAAACTTACAGTCTCAGCTGTATGCAGAGCAGGCTCAGCAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCTGCTGAGCCTGCTCTGCATACAGCTGAGACTGTAAGTTTCGCAGCTCCTTGCTTCAGAACACAGTaGCTTCGGGAAATCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAAEPALHTAETVSFAAPCFRTQ*LREIIR Trigger: TCTGATGATTTCCCGAAGCCACTGTGTTCTGAAGCA...AGGAGCTGCGAAACTTACAGTCTCAGCTGTATGCAGAGCAGGCTCAGCAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS-3UTR GCA 90 bp | CAGAACCAGGGAGTTGGTTCTGGACTCAATGTCCTTTCGACAAATGGGACACTCTGTCCCTCAGGATTCTaGTTCAGAACACAGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNQGVGSGLNVLSTNGTLCPSGF*FRTQWL Trigger: AAGCCACTGTGTTCTGAAGCAGAATCCTGAGGGACA...GAGTGTCCCATTTGTCGAAAGGACATTGAGTCCAGAACCAACTCCCTGGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCCTTCTGCTTCTTAGGACAACTGAGTTCCAGGACCTTTGGAAGAGCAGAGATGGAATCTCTCTCTTaGTGCTGCAAAACCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAFCFLGQLSSRTFGRAEMESLS*CCKTFC Trigger: GCAGAAGGTTTTGCAGCAGCAAGAGAGAGATTCCAT...CTCTGCTCTTCCAAAGGTCCTGGAACTCAGTTGTCCTAAGAAGCAGAAGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| CDS-3UTR CCA 90 bp | TGCGCCACCACTGCCTGGCTGAGCTGTCTTATTCTAATTGGTGTATCAAGTAACCCAGAACCAGGGAGTTaGTTCTGGACTCAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CATTAWLSCLILIGVSSNPEPGS*FWTQCP Trigger: AGGACATTGAGTCCAGAACCAACTCCCTGGTTCTGG...GTTACTTGATACACCAATTAGAATAAGACAGCTCAGCCAGGCAGTGGTGGCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | AGAGGAGGGGTGTGTCAGGTTCTCATTAATCATTGCTaGCCCATGAGACTGAGGGAAAGAGCACGGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RGGVCQVLINHC*PMRLRERARKT Trigger: TGTTTTCCGTGCTCTTTCCCTCAGTCTCATGGGCAAGCAATGATTAATGAGAACCTGACACACCCCTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | AGGCATTTATTCACAAATAAGCCTCAGCGTCGTTATTaGGGAACTGGGATCCAGGGAGACAAGCCCGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RHLFTNKPQRRY*GTGIQGDKPAV Trigger: AACTGCGGGCTTGTCTCCCTGGATCCCAGTTCCCAAATAACGACGCTGAGGCTTATTTGTGAATAAATGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGATGGCTCAGTGATTAAGGGCTATGCTGCTCTTGCAGAGGACCCAGGTGTTTCATCCATTCATTaGTACAGAAGGAGCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WRDGSVIKGYAALAEDPGVSSIH*YRRSRN Trigger: GTTTCTGCTCCTTCTGTATCAATGAATGGATGAAAC...ACCTGGGTCCTCTGCAAGAGCAGCATAGCCCTTAATCACTGAGCCATCTCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR GCA 90 bp | TGCTTCTCCTGCATCTGTGTTTTCAGCTTCAGCATCCTGGACATGGTCACCTTATGTCCCTCAGGATTCTaGTTCAGAACACAGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFSCICVFSFSILDMVTLCPSGF*FRTQWL Trigger: AAGCCACTGTGTTCTGAAGCAGAATCCTGAGGGACA...TAAGGTGACCATGTCCAGGATGCTGAAGCTGAAAACACAGATGCAGGAGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS-3UTR GCA 90 bp | GACTGTATGCAAACATACATCCCCATGCAACCATGTAAGACACATGCATGGGTAGGTCTGCAGGCCTTCTaGTTCTTAGGACAACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DCMQTYIPMQPCKTHAWVGLQAF*FLGQLS Trigger: ACTCAGTTGTCCTAAGAAGCAGAAGGCCTGCAGACC...TACCCATGCATGTGTCTTACATGGTTGCATGGGGATGTATGTTTGCATACAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CCA 90 bp | TGGGCACAGTTCAGGGTGACAGCCTCAATAAAGTACTCCGAGCAGATAATGCACACCTTTGATATCAGCTaGTATGTGACACTAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WAQFRVTASIKYSEQIMHTFDIS*YVTLSP Trigger: GGGACTTAGTGTCACATACCAGCTGATATCAAAGGT...GTGCATTATCTGCTCGGAGTACTTTATTGAGGCTGTCACCCTGAACTGTGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTGAGCTGTCTTATTCTAATTGGTGTATCAAGTAACCTTTTCAGGCATTGGAGGTCGCACTCTCCTTaGTCTTTCTCCAAACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLSCLILIGVSSNLFRHWRSHSP*SFSKPW Trigger: CCAGGGTTTGGAGAAAGAGCAAGGAGAGTGCGACCT...CCAATGCCTGAAAAGGTTACTTGATACACCAATTAGAATAAGACAGCTCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTCCTGCATCTGTGTTTTCAGCTTCAGCATCCTGGACATGGTCACCTTAACCTTTGATATCAGCTaGTATGTGACACTAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CFSCICVFSFSILDMVTLTFDIS*YVTLSP Trigger: GGGACTTAGTGTCACATACCAGCTGATATCAAAGGT...TAAGGTGACCATGTCCAGGATGCTGAAGCTGAAAACACAGATGCAGGAGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS-3UTR CCA 90 bp | TCACACCCAGCTGTCCACAATGATGTCAAGAGGGTGCATGAGGTATCAAAAACATGCTTCAGAACACAGTaGCTTCGGGAAATCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHPAVHNDVKRVHEVSKTCFRTQ*LREIIR Trigger: TCTGATGATTTCCCGAAGCCACTGTGTTCTGAAGCA...TGTTTTTGATACCTCATGCACCCTCTTGACATCATTGTGGACAGCTGGGTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CAA 72 bp | GGGAGGGAAAAGCTTCTGCAAGCAGTGTTGGTGCACTaGAGCCAAACTAAGAACAGTATTTCTTCAGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GREKLLQAVLVH*SQTKNSISSVL Trigger: TAGGACTGAAGAAATACTGTTCTTAGTTTGGCTCAAGTGCACCAACACTGCTTGCAGAAGCTTTTCCCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | ACCATCTTACTAATGCAGTTGTCCAGAACCAGGGAGTaGGTTCTGGACTCAATGTCCTTTCGACAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TILLMQLSRTRE*VLDSMSFRQMG Trigger: TCCCATTTGTCGAAAGGACATTGAGTCCAGAACCAACTCCCTGGTTCTGGACAACTGCATTAGTAAGATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CAA 72 bp | TCTGAGCTTAGGTTATCCACCATCTTACTAATGCAGTaGTCCAGAACCAGGGAGTTGGTTCTGGACTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SELRLSTILLMQ*SRTRELVLDSM Trigger: CATTGAGTCCAGAACCAACTCCCTGGTTCTGGACAACTGCATTAGTAAGATGGTGGATAACCTAAGCTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS-3UTR TCA 90 bp | GATGTCAAGAGGGTGCATGAGGTATCAAAAACAATCAACAAATTAAGAAACACATCTTCCATTAGAGCCTaGTGCTCCTGCAGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DVKRVHEVSKTINKLRNTSSIRA*CSCRAC Trigger: GCAGGCCCTGCAGGAGCATCAGGCTCTAATGGAAGA...TGTGTTTCTTAATTTGTTGATTGTTTTTGATACCTCATGCACCCTCTTGACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CCA 90 bp | GCTGTCCACAATGATGTCAAGAGGGTGCATGAGGTATCAAAAACAATCAACAAAGCCATGCAACTTCTCTaGCTCAATGGGTTTACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVHNDVKRVHEVSKTINKAMQLL*LNGFTG Trigger: GCCAGTAAACCCATTGAGCCAGAGAAGTTGCATGGC...TTTGTTGATTGTTTTTGATACCTCATGCACCCTCTTGACATCATTGTGGACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024817.15 ENSMUST00000234362.2 |
||
| 3UTR CAA 72 bp | AAGGCTTTGCATCACCACTACAGGAACAGGTTCCTCTaGTTCTCATCAGTTAACACTGGTGACACACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KALHHHYRNRFL*FSSVNTGDTQT Trigger: AGTTTGTGTGTCACCAGTGTTAACTGATGAGAACAAGAGGAACCTGTTCCTGTAGTGGTGATGCAAAGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | ACATTGGCAGGGTATACAGAACTAAAAATAGAAGGGTaGAGATCAGAGCTCAGCCCACCCAATAGTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLAGYTELKIEG*RSELSPPNSCH Trigger: ATGGCAACTATTGGGTGGGCTGAGCTCTGATCTCAACCCTTCTATTTTTAGTTCTGTATACCCTGCCAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR GCA 90 bp | TGCGCCACCACTGCCTGGCTGAGCTGTCTTATTCTAATTGGTGTATCAAGTAACTCTCAAAGTCCTTCTTaGTGCAATTTAGTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CATTAWLSCLILIGVSSNSQSPS*CNLVLP Trigger: TGGAAGAACTAAATTGCAGCAAGAAGGACTTTGAGA...GTTACTTGATACACCAATTAGAATAAGACAGCTCAGCCAGGCAGTGGTGGCGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CCA 90 bp | CTGTCCACAATGATGTCAAGAGGGTGCATGAGGTATCAAAAACAATCAACAAATCCAGGGAGTTGGTTCTaGACTCAATGTCCTTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSTMMSRGCMRYQKQSTNPGSWF*TQCPFD Trigger: GTCGAAAGGACATTGAGTCCAGAACCAACTCCCTGG...ATTTGTTGATTGTTTTTGATACCTCATGCACCCTCTTGACATCATTGTGGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CCA 90 bp | GACTGTATGCAAACATACATCCCCATGCAACCATGTAAGACACATGCATGGGTATGTCCTTTTCTTCCTTaGTCTGCTCCAATTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DCMQTYIPMQPCKTHAWVCPFLP*SAPILC Trigger: ACAAAGAATTGGAGCAGACCAAGGAAGAAAAGGACA...TACCCATGCATGTGTCTTACATGGTTGCATGGGGATGTATGTTTGCATACAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | GAACTTATGGGTCAGCTGTTGATGTGCCAGAAAACTTaGTCAGCAAGGTTAAGGCAGTTATGTGGTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: ELMGQLLMCQKT*SARLRQLCGLS Trigger: AGATAAACCACATAACTGCCTTAACCTTGCTGACAAAGTTTTCTGGCACATCAACAGCTGACCCATAAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR TCA 90 bp | GTCCTTTTCTTCCTTGGTCTGCTCCAATTCTTTGTTCTTGGCTTGAATGATTTTCCCAGTCTTCTTCAATaGCTTCGTATTCATACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLFFLGLLQFFVLGLNDFPSLLQ*LRIHTP Trigger: CGGAGTATGAATACGAAGTCATTGAAGAAGACTGGG...AAAATCATTCAAGCCAAGAACAAAGAATTGGAGCAGACCAAGGAAGAAAAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234362.2 |
||
| CDS-3UTR GCA 90 bp | GATGTCAAGAGGGTGCATGAGGTATCAAAAACAATCAACAAATTAAGAAACACATGTCCCTCAGGATTCTaGTTCAGAACACAGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DVKRVHEVSKTINKLRNTCPSGF*FRTQWL Trigger: AAGCCACTGTGTTCTGAAGCAGAATCCTGAGGGACA...TGTGTTTCTTAATTTGTTGATTGTTTTTGATACCTCATGCACCCTCTTGACATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| 3UTR CAA 72 bp | TGTTACAATGTAGCTCCTTGCAAGTCTTTACTACTGTaGTTCTTCCATAGTTCCCAAACATTGGCAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CYNVAPCKSLLL*FFHSSQTLAGY Trigger: ATACCCTGCCAATGTTTGGGAACTATGGAAGAACAACAGTAGTAAAGACTTGCAAGGAGCTACATTGTAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| 3UTR CAA 72 bp | TCTTTACTACTGTTGTTCTTCCATAGTTCCCAAACATaGGCAGGGTATACAGAACTAAAAATAGAAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLLFFHSSQT*AGYTELKIEGL Trigger: CAACCCTTCTATTTTTAGTTCTGTATACCCTGCCAATGTTTGGGAACTATGGAAGAACAACAGTAGTAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS GCA 90 bp | CAGCTCGCCAGGCCTCTCGCCCTCACCTCAGTCCCAGCCTCCAGCTaGAGCCACTCGCAGTCCATCCCCAGCCGCCGCAAGCACCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLARPLALTSVPASS*SHSQSIPSRRKHQL Trigger: GAGCTGGTGCTTGCGGCGGCTGGGGATGGACTGCGAGTGGCTGCAGCTGGAGGCTGGGACTGAGGTGAGGGCGAGAGGCCTGGCGAGCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234498.2 |
||
| CDS CCA 90 bp | CTTAACTGGGACAGTGCCTGTTCTCGACCCCATCCTTCTCCTCGCTaGGAGGCCCGCGTCCGTTACAGCGGCTCCGGCACGGGTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LNWDSACSRPHPSPR*EARVRYSGSGTGPA Trigger: AGCGGGACCCGTGCCGGAGCCGCTGTAACGGACGCGGGCCTCCCAGCGAGGAGAAGGATGGGGTCGAGAACAGGCACTGTCCCAGTTAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234498.2 |
||
| CDS GCA 90 bp | ACACTAAGTCCCCGTCCTATGGTCACCTCAGTCCCAGCCTCCAGCTaGAGCCACTCGCAGTCCATCCCCAGCCGCCGCAAGCACCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSPRPMVTSVPASS*SHSQSIPSRRKHQL Trigger: GAGCTGGTGCTTGCGGCGGCTGGGGATGGACTGCGAGTGGCTGCAGCTGGAGGCTGGGACTGAGGTGACCATAGGACGGGGACTTAGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCCCTGAACTTGAGCTCTCAGGCTGAGGGCTGCTGGCAGTCTATCAGGGACCAGGTCGCACTCTCCTaGCTCTTTCTCCAAACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AALNLSSQAEGCWQSIRDQVALS*LFLQTL Trigger: CAGGGTTTGGAGAAAGAGCAAGGAGAGTGCGACCTG...GTCCCTGATAGACTGCCAGCAGCCCTCAGCCTGAGAGCTCAAGTTCAGGGCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CAA 90 bp | CACAGACTTCCTAACTCAGTCTCTGCAGCGCATGGCTTCCAGAAGACGTCCAGAGGCCTGCACCAGCTGTaGCTTCAGGTCGCACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRLPNSVSAAHGFQKTSRGLHQL*LQVALS Trigger: GGAGAGTGCGACCTGAAGCAACAGCTGGTGCAGGCC...TCTGGACGTCTTCTGGAAGCCATGCGCTGCAGAGACTGAGTTAGGAAGTCTGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CAA 90 bp | ACGTCCAGAGCAGCCTCAGGGAATCCAGGGAATCCTCTAGAACAAGCCAAGCCGTTCTGCGCTTGCACCTaGTCCTTTTCTTCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSRAASGNPGNPLEQAKPFCACT*SFSSLV Trigger: GACCAAGGAAGAAAAGGACAAGGTGCAAGCGCAGAA...CGGCTTGGCTTGTTCTAGAGGATTCCCTGGATTCCCTGAGGCTGCTCTGGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CAA 90 bp | CTCCAGGCTAATGAGACCCGATCTCAAAACACAGCGTGGAGGCTGGGGGTGGGGCGTTTCATCCATTCATaGATACAGAAGGAGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQANETRSQNTAWRLGVGRFIHS*IQKEQK Trigger: TTTCTGCTCCTTCTGTATCAATGAATGGATGAAACG...CCCCACCCCCAGCCTCCACGCTGTGTTTTGAGATCGGGTCTCATTAGCCTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS CCA 90 bp | CAGTGGCTTCGGGAAATCATCAGAGGGCAAACCTTTGATATCAGCTaGTATGTGACACTAAGTCCCCGTCCTATGGTCACCTCAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QWLREIIRGQTFDIS*YVTLSPRPMVTSVP Trigger: TGGGACTGAGGTGACCATAGGACGGGGACTTAGTGTCACATACCAGCTGATATCAAAGGTTTGCCCTCTGATGATTTCCCGAAGCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS TCA 90 bp | CTTCAGAACACAGTGGCTTCGGGAAATCATCAGAGGGCAAACCTTTaGTATCAGCTGGTATGTGACACTAAGTCCCCGTCCTATGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQNTVASGNHQRANL*YQLVCDTKSPSYGH Trigger: GTGACCATAGGACGGGGACTTAGTGTCACATACCAGCTGATATCAAAGGTTTGCCCTCTGATGATTTCCCGAAGCCACTGTGTTCTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS GCA 90 bp | GGAAAACCCTTATTGTCCATAATGGTCCACTGTCCCTCAGGATTCTaGTTCAGAACACAGTGGCTTCGGGAAATCATCAGAGGGCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: GKPLLSIMVHCPSGF*FRTQWLREIIRGQT Trigger: GGTTTGCCCTCTGATGATTTCCCGAAGCCACTGTGTTCTGAAGCAGAATCCTGAGGGACAGTGGACCATTATGGACAATAAGGGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172485.8 |
||
| CDS CCA 90 bp | TCCATAATGGTCCACTGTCCCTCAGGATTCTGCTTCAGAACACAGTaGCTTCGGGAAATCATCAGAGGGCAAACCTTTGATATCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SIMVHCPSGFCFRTQ*LREIIRGQTFDISW Trigger: CCAGCTGATATCAAAGGTTTGCCCTCTGATGATTTCCCGAAGCCACTGTGTTCTGAAGCAGAATCCTGAGGGACAGTGGACCATTATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS-3UTR CAA 90 bp | TCACACCCAGCTGTCCACAATGATGTCAAGAGGGTGCATGAGGTATCAAAAACATCCTCACGATCTTCTTaGAGCTCCCCTTCCGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHPAVHNDVKRVHEVSKTSSRSS*SSPSES Trigger: AGACTCGGAAGGGGAGCTCAAAGAAGATCGTGAGGA...TGTTTTTGATACCTCATGCACCCTCTTGACATCATTGTGGACAGCTGGGTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS GCA 90 bp | TTCAGACTCTTATTGTCCATAATGGTCCACTGTCCCTCAGGATTCTaGTTCAGAACACAGTGGCTTCGGGAAATCATCAGAGGGCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: FRLLLSIMVHCPSGF*FRTQWLREIIRGQT Trigger: GGTTTGCCCTCTGATGATTTCCCGAAGCCACTGTGTTCTGAAGCAGAATCCTGAGGGACAGTGGACCATTATGGACAATAAGAGTCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024817.15 ENSMUST00000234362.2 |
||
| CDS-3UTR CAA 90 bp | TTGCATCACCACTACAGGAACAGGTTCCTCTTGTTCTCATCAGTTAACACTGGTATCTTACTAATGCAGTaGTCCAGAACCAGGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHHHYRNRFLLFSSVNTGILLMQ*SRTREL Trigger: CAACTCCCTGGTTCTGGACAACTGCATTAGTAAGAT...ACCAGTGTTAACTGATGAGAACAAGAGGAACCTGTTCCTGTAGTGGTGATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CAA 90 bp | GATGTCAAGAGGGTGCATGAGGTATCAAAAACAATCAACAAATTAAGAAACACATCCAGAACCAGGGAGTaGGTTCTGGACTCAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DVKRVHEVSKTINKLRNTSRTRE*VLDSMS Trigger: GGACATTGAGTCCAGAACCAACTCCCTGGTTCTGGA...TGTGTTTCTTAATTTGTTGATTGTTTTTGATACCTCATGCACCCTCTTGACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS-3UTR CAA 90 bp | GATGTCAAGAGGGTGCATGAGGTATCAAAAACAATCAACAAATTAAGAAACACATTCTCAAAGTCCTTCTaGCTGCAATTTAGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DVKRVHEVSKTINKLRNTFSKSF*LQFSSS Trigger: GGAAGAACTAAATTGCAGCAAGAAGGACTTTGAGAA...TGTGTTTCTTAATTTGTTGATTGTTTTTGATACCTCATGCACCCTCTTGACATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024817.15 |
||
| CDS GCA 72 bp | CCCCGTCCTATGGTCACCTCAGTCCCAGCCTCCAGCTaGAGCCACTCGCAGTCCATCCCCAGCCGCCGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PRPMVTSVPASS*SHSQSIPSRRK Trigger: CTTGCGGCGGCTGGGGATGGACTGCGAGTGGCTGCAGCTGGAGGCTGGGACTGAGGTGACCATAGGACGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS CCA 72 bp | GACAGTGCCTGTTCTCGACCCCATCCTTCTCCTCGCTaGGAGGCCCGCGTCCGTTACAGCGGCTCCGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: DSACSRPHPSPR*EARVRYSGSGT Trigger: CGTGCCGGAGCCGCTGTAACGGACGCGGGCCTCCCAGCGAGGAGAAGGATGGGGTCGAGAACAGGCACTGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234498.2 |
||
| CDS GCA 72 bp | CAAACACCATTCAGACTCTCAGTCCCAGCCTCCAGCTaGAGCCACTCGCAGTCCATCCCCAGCCGCCGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: QTPFRLSVPASS*SHSQSIPSRRK Trigger: CTTGCGGCGGCTGGGGATGGACTGCGAGTGGCTGCAGCTGGAGGCTGGGACTGAGAGTCTGAATGGTGTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162588.3 |
||
| CDS CCA 72 bp | CAACTGAGTTCCAGGACCTTTGCCATGCAACTTCTCTaGCTCAATGGGTTTACTGGCGACATTAGCCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QLSSRTFAMQLL*LNGFTGDISQW Trigger: CCACTGGCTAATGTCGCCAGTAAACCCATTGAGCCAGAGAAGTTGCATGGCAAAGGTCCTGGAACTCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234362.2 |
||
| CDS CCA 72 bp | CGGGAAATCATCAGAGGGCAAACCTTTGATATCAGCTaGTATGTGACACTAAGTCCCCGTCCTATGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: REIIRGQTFDIS*YVTLSPRPMVT Trigger: GGTGACCATAGGACGGGGACTTAGTGTCACATACCAGCTGATATCAAAGGTTTGCCCTCTGATGATTTCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS CCA 72 bp | GTCCACTGTCCCTCAGGATTCTGCTTCAGAACACAGTaGCTTCGGGAAATCATCAGAGGGCAAACCTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VHCPSGFCFRTQ*LREIIRGQTFD Trigger: ATCAAAGGTTTGCCCTCTGATGATTTCCCGAAGCCACTGTGTTCTGAAGCAGAATCCTGAGGGACAGTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||
| CDS GCA 72 bp | TTATTGTCCATAATGGTCCACTGTCCCTCAGGATTCTaGTTCAGAACACAGTGGCTTCGGGAAATCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLSIMVHCPSGF*FRTQWLREIIR Trigger: TCTGATGATTTCCCGAAGCCACTGTGTTCTGAAGCAGAATCCTGAGGGACAGTGGACCATTATGGACAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024817.15 ENSMUST00000172485.8 ENSMUST00000234362.2 |
||