Pregenerated sensors for RNF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029634Ensembl transcript IDs: ENSMUST00000067837.10, ENSMUST00000161331.8, ENSMUST00000161574.8, ENSMUST00000161859.8, ENSMUST00000162219.2, ENSMUST00000169407.9
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTGCACCGTCCTGGGCCTaGCTGGCCTGTGAGGACGCT | + |
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Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPAPSWA*LACEDA Trigger: AGCGTCCTCACAGGCCAGTCAGGCCCAGGACGGTGC...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTACGCTGGGTGGCAGCTaGGGACCTGCTAGACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPTLGGS*GPARLS Trigger: GGAGAGTCTAGCAGGTCCTCAGCTGCCACCCAGCGT...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTGGCCTGACTGGCCTGTaGGGACGCTCTTCCATGCTG | + |
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Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPGLTGL*GRSSML Trigger: CAGCATGGAAGAGCGTCCTCACAGGCCAGTCAGGCC...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGCACCGTCCTGGGCCTaGCTGGCCTGTGAGGACGCT | + |
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Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTAPSWA*LACEDA Trigger: AGCGTCCTCACAGGCCAGTCAGGCCCAGGACGGTGC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTGCCTTCTACTTCTACTaGCACTGGGGCGAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPAFYFY*HWGEPG Trigger: CCCAGGCTCGCCCCAGTGGCAGTAGAAGTAGAAGGC...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTTGCAGACAAGGCAGCTaGCGGAGCTTGTTCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPCRQGS*RSLFPA Trigger: GGCTGGGAACAAGCTCCGGCAGCTGCCTTGTCTGCA...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCACGCTGGGTGGCAGCTaGGGACCTGCTAGACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTTLGGS*GPARLS Trigger: GGAGAGTCTAGCAGGTCCTCAGCTGCCACCCAGCGT...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTCTTGCAGGTCCAGTGTaGTTGCTGGATGACGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPLAGPV*LLDDAG Trigger: CCCAGCGTCATCCAGCAATCACACTGGACCTGCAAG...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGGCCTGACTGGCCTGTaGGGACGCTCTTCCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTGLTGL*GRSSML Trigger: CAGCATGGAAGAGCGTCCTCACAGGCCAGTCAGGCC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTCTGTCAGAGCCAGGCTaGGATGCCAGCTGTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPLSEPG*DASCSF Trigger: AAAGGAACAGCTGGCATCTCAGCCTGGCTCTGACAG...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTCGTTGGCCATTGCTTTaGTTCTCTGACGCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPRWPLL*FSDAGS Trigger: GGAGCCTGCGTCAGAGAATCAAAGCAATGGCCAACG...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGGCACCGTCCTGGGCCTaGCTGGCCTGTGAGGACGCT | + |
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Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKAPSWA*LACEDA Trigger: AGCGTCCTCACAGGCCAGTCAGGCCCAGGACGGTGC...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGCCTTCTACTTCTACTaGCACTGGGGCGAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTAFYFY*HWGEPG Trigger: CCCAGGCTCGCCCCAGTGGCAGTAGAAGTAGAAGGC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCTGCAGACAAGGCAGCTaGCGGAGCTTGTTCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTCRQGS*RSLFPA Trigger: GGCTGGGAACAAGCTCCGGCAGCTGCCTTGTCTGCA...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCTTGCAGGTCCAGTGTaGTTGCTGGATGACGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTLAGPV*LLDDAG Trigger: CCCAGCGTCATCCAGCAATCACACTGGACCTGCAAG...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTAGAGCCAGGCTGAGATaGCAGCTGTTCCTTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPRARLR*QLFLCS Trigger: AGAGCAAAGGAACAGCTGGCATCTCAGCCTGGCTCT...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTGTTGCAAATGACCCTTaGACAGAACCCTGCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPVANDP*TEPCLL Trigger: GAGGAGGCAGGGTTCTGTGCAAGGGTCATTTGCAAC...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTAGCCACAGGACTCGATaGTCTTTGCTGCCTATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPSHRTR*SLLPML Trigger: GAGCATAGGCAGCAAAGACCATCGAGTCCTGTGGCT...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGAGCTCATGGAGGTCTaGCTTCTGGTTCGCCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTELMEV*LLVRLA Trigger: GGCTAGGCGAACCAGAAGCCAGACCTCCATGAGCTC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCTGTCAGAGCCAGGCTaGGATGCCAGCTGTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTLSEPG*DASCSF Trigger: AAAGGAACAGCTGGCATCTCAGCCTGGCTCTGACAG...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGCCGTCCACCTTGCCTaGGAGTACTACCATCTGACT | + |
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Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTAVHLA*EYYHLT Trigger: AGTCAGATGGTAGTACTCTCAGGCAAGGTGGACGGC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTATTGCTTTGATTCTCTaGCGCAGGCTCCACCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPIALIL*RRLHLH Trigger: ATGGAGGTGGAGCCTGCGTCAGAGAATCAAAGCAAT...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCGTTGGCCATTGCTTTaGTTCTCTGACGCAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTRWPLL*FSDAGS Trigger: GGAGCCTGCGTCAGAGAATCAAAGCAATGGCCAACG...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTGTTTTCCCAAATATGTaGTGCTCCAAACCGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPVFPNM*CSKPLP Trigger: CGGCAGCGGTTTGGAGCAGCACATATTTGGGAAAAC...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTGCGGGGTGTAATCAGTaGCTCTGTGTTCTCTACCTT | + |
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Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPAGCNQ*LCVLYL Trigger: AAGGTAGAGAACACAGAGGCACTGATTACACCCCGC...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTTCCGCCCTTCCTAACTaGCTTCTACTTCTACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPSALPN*LLLLLP Trigger: TGGCAGTAGAAGTAGAAGGCAGTTAGGAAGGGCGGA...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGACCACTGGAGCTCATaGAGGTCTGGCTTCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTDHWSS*RSGFWF Trigger: GAACCAGAAGCCAGACCTCCATGAGCTCCAGTGGTC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCTGCTCTAAGGCTTTCTaGGTCTCCATCACTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTCSKAF*VSITCR Trigger: GCGGCAAGTGATGGAGACTCAGAAAGCCTTAGAGCA...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTACCGGCTTCGACTACTaGAAGCAGGACGTAATCTTA | + |
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Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPTGFDY*KQDVIL Trigger: TAAGATTACGTCCTGCTTTCAGTAGTCGAAGCCGGT...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCTGCGAAGAGGAACTGTaGTGGTGCTCACGTAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTCEEEL*WCSRRF Trigger: GAACCTACGTGAGCACCATCACAGTTCCTCTTCGCA...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCAGAGCCAGGCTGAGATaGCAGCTGTTCCTTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTRARLR*QLFLCS Trigger: AGAGCAAAGGAACAGCTGGCATCTCAGCCTGGCTCT...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTGTCGAGTCCTCTCCATaGATTTCAGAACCTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPVESSP*ISEPLL Trigger: CAACAGAGGTTCTGAAATGCATGGAGAGGACTCGAC...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTGGACTCGATGGTCTTTaGTGCCTATGCTCTCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPGLDGL*CLCSLL Trigger: TAACAGAGAGCATAGGCAGCAAAGACCATCGAGTCC...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGTTGCAAATGACCCTTaGACAGAACCCTGCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTVANDP*TEPCLL Trigger: GAGGAGGCAGGGTTCTGTGCAAGGGTCATTTGCAAC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCATTCTGTCTCTGAATaGGGGACCGGCTTCGACTAC | + |
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Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTHSVSE*GTGFDY Trigger: GTAGTCGAAGCCGGTCCCCCATTCAGAGACAGAATG...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCTTCTCCACTCCCACCTaGTCTAGATCTAGACGGATC | + |
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Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTFSTPT*SRSRRI Trigger: GATCCGTCTAGATCTAGATCAGGTGGGAGTGGAGAA...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGCTTGCAGGTCCAGTGTaGTTGCTGGATGACGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKLAGPV*LLDDAG Trigger: CCCAGCGTCATCCAGCAATCACACTGGACCTGCAAG...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCATTGCTTTGATTCTCTaGCGCAGGCTCCACCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTIALIL*RRLHLH Trigger: ATGGAGGTGGAGCCTGCGTCAGAGAATCAAAGCAAT...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGTTTTCCCAAATATGTaGTGCTCCAAACCGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTVFPNM*CSKPLP Trigger: CGGCAGCGGTTTGGAGCAGCACATATTTGGGAAAAC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGCGGGGTGTAATCAGTaGCTCTGTGTTCTCTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTAGCNQ*LCVLYL Trigger: AAGGTAGAGAACACAGAGGCACTGATTACACCCCGC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTGTAAACGTTGGCCATTaGTTTGATTCTCTGACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPVNVGH*FDSLTQ Trigger: CTGCGTCAGAGAATCAAAGCAATGGCCAACGTTTAC...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR CCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGGAGCTCATGGAGGTCTaGCTTCTGGTTCGCCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKELMEV*LLVRLA Trigger: GGCTAGGCGAACCAGAAGCCAGACCTCCATGAGCTC...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR GCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTTGGAGACGTTCTTGCTaGCATCTTCTCTCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPWRRSC*HLLSFS Trigger: AGAAAATGAGAGAAGATGGCAGCAAGAACGTCTCCA...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGGACTCGATGGTCTTTaGTGCCTATGCTCTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTGLDGL*CLCSLL Trigger: TAACAGAGAGCATAGGCAGCAAAGACCATCGAGTCC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCGCGTTACACCTCTGTaGCTAACAGACCTGTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTRVTPL*LTDLFL Trigger: TAGAAACAGGTCTGTTAGGCACAGAGGTGTAACGCG...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR TCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTCTTCTCTCATTTTCTTaGAATGAGCTCTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPLLSFS*NELSSP Trigger: TGGAGAAGAGAGCTCATTTCAAGAAAATGAGAGAAG...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR TCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGTGCTCTAAGGCTTTCTaGGTCTCCATCACTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKCSKAF*VSITCR Trigger: GCGGCAAGTGATGGAGACTCAGAAAGCCTTAGAGCA...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR TCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGTGCGAAGAGGAACTGTaGTGGTGCTCACGTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKCEEEL*WCSRRF Trigger: GAACCTACGTGAGCACCATCACAGTTCCTCTTCGCA...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR GCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGGTTGCAAATGACCCTTaGACAGAACCCTGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKVANDP*TEPCLL Trigger: GAGGAGGCAGGGTTCTGTGCAAGGGTCATTTGCAAC...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGTAAACGTTGGCCATTaGTTTGATTCTCTGACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTVNVGH*FDSLTQ Trigger: CTGCGTCAGAGAATCAAAGCAATGGCCAACGTTTAC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR CCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGAGCCACAGGACTCGATaGTCTTTGCTGCCTATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKSHRTR*SLLPML Trigger: GAGCATAGGCAGCAAAGACCATCGAGTCCTGTGGCT...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR CCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTGTACTACCATCTGACTaGTTGGTGTGGGAATTAATA | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPVLPSD*LVWELI Trigger: TATTAATTCCCACACCAACCAGTCAGATGGTAGTAC...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR TCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGATTGCTTTGATTCTCTaGCGCAGGCTCCACCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKIALIL*RRLHLH Trigger: ATGGAGGTGGAGCCTGCGTCAGAGAATCAAAGCAAT...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCTGGAGACGTTCTTGCTaGCATCTTCTCTCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTWRRSC*HLLSFS Trigger: AGAAAATGAGAGAAGATGGCAGCAAGAACGTCTCCA...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR GCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGGTTTTCCCAAATATGTaGTGCTCCAAACCGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKVFPNM*CSKPLP Trigger: CGGCAGCGGTTTGGAGCAGCACATATTTGGGAAAAC...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR GCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGTCCGCCCTTCCTAACTaGCTTCTACTTCTACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKSALPN*LLLLLP Trigger: TGGCAGTAGAAGTAGAAGGCAGTTAGGAAGGGCGGA...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR CCA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTTGTCAATCTGCTCTTTaGTTAAACCACGAATTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPCQSAL*LNHELD Trigger: ATCCAATTCGTGGTTTAACCAAAGAGCAGATTGACA...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR TCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCTTCTCTCATTTTCTTaGAATGAGCTCTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTLLSFS*NELSSP Trigger: TGGAGAAGAGAGCTCATTTCAAGAAAATGAGAGAAG...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR TCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGACCGGCTTCGACTACTaGAAGCAGGACGTAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKTGFDY*KQDVIL Trigger: TAAGATTACGTCCTGCTTTCAGTAGTCGAAGCCGGT...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR CCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCGTACTACCATCTGACTaGTTGGTGTGGGAATTAATA | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTVLPSD*LVWELI Trigger: TATTAATTCCCACACCAACCAGTCAGATGGTAGTAC...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CCA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCTGTCAATCTGCTCTTTaGTTAAACCACGAATTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTCQSAL*LNHELD Trigger: ATCCAATTCGTGGTTTAACCAAAGAGCAGATTGACA...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGGTACTACCATCTGACTaGTTGGTGTGGGAATTAATA | + |
|
Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKVLPSD*LVWELI Trigger: TATTAATTCCCACACCAACCAGTCAGATGGTAGTAC...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR CCA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGTGTCAATCTGCTCTTTaGTTAAACCACGAATTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SNWKIPAIPTAVLGERLKCQSAL*LNHELD Trigger: ATCCAATTCGTGGTTTAACCAAAGAGCAGATTGACA...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS CCA 90 bp | GCCCTTCCTAACTGCCTTCTACTTCTACTGCCACTGGGGCGAGCCTaGGGCGGGGCGGGCTCCCTCACAGCTAGCATTTCAGCACCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALPNCLLLLLPLGRA*GGAGSLTASISAPS Trigger: GGACGGTGCTGAAATGCTAGCTGTGAGGGAGCCCGCCCCGCCCCAGGCTCGCCCCAGTGGCAGTAGAAGTAGAAGGCAGTTAGGAAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS CCA 90 bp | CTACGCTGTCCGCCCTTCCTAACTGCCTTCTACTTCTACTGCCACTaGGGCGAGCCTGGGGCGGGGCGGGCTCCCTCACAGCTAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LRCPPFLTAFYFYCH*GEPGAGRAPSQLAF Trigger: AAATGCTAGCTGTGAGGGAGCCCGCCCCGCCCCAGGCTCGCCCCAGTGGCAGTAGAAGTAGAAGGCAGTTAGGAAGGGCGGACAGCGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS CCA 90 bp | CGGGCTCCCTCACAGCTAGCATTTCAGCACCGTCCTGGGCCTGACTaGCCTGTGAGGACGCTCTTCCATGCTGACCACTGTCATCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAPSQLAFQHRPGPD*PVRTLFHADHCHRL Trigger: CAGCCGATGACAGTGGTCAGCATGGAAGAGCGTCCTCACAGGCCAGTCAGGCCCAGGACGGTGCTGAAATGCTAGCTGTGAGGGAGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS GCA 90 bp | ACTCCAATTCCATTCCTTAACCTTCCCAGAGTTGCAAATGACCCTTaGACAGAACCCTGCCTCCTCGCACCACGCCTGCCCCTAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: TPIPFLNLPRVANDP*TEPCLLAPRLPLGP Trigger: TGGTCCTAGGGGCAGGCGTGGTGCGAGGAGGCAGGGTTCTGTGCAAGGGTCATTTGCAACTCTGGGAAGGTTAAGGAATGGAATTGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
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| CDS GCA 90 bp | TCCAGCTTTGGTTCCCATTCTGTCCGCTTCGAGTCACATTCCCAGTaGGCCGAAAGGTATTCAGCCATCGCAGCAGAGAGTCCTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSFGSHSVRFESHSQ*AERYSAIAAESPHL Trigger: CAGATGAGGACTCTCTGCTGCGATGGCTGAATACCTTTCGGCGCACTGGGAATGTGACTCGAAGCGGACAGAATGGGAACCAAAGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067837.10 ENSMUST00000161331.8 ENSMUST00000161574.8 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
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| CDS GCA 90 bp | GATAGTTCTGTGGAAGCCCCCACTGGTGCTCTCAACCGTACTTTCTaGCAGCCCCGCCCTAGATCGGGTTCTATTTGCAATGCTATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DSSVEAPTGALNRTF*QPRPRSGSICNAIP Trigger: AGGGATAGCATTGCAAATAGAACCCGATCTAGGGCGGGGCTGGCAGAAAGTACGGTTGAGAGCACCAGTGGGGGCTTCCACAGAACTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS GCA 90 bp | TTGTGGCTCCGAATTCTAAGACAGGCCGCCGACAGACGGGGCAGGTaGAGTTCTCCGACAGCCAGCGATCAATACAGTGAATGTGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LWLRILRQAADRRGR*SSPTASDQYSECET Trigger: AGTTTCACATTCACTGTATTGATCGCTGGCTGTCGGAGAACTGCACCTGCCCCGTCTGTCGGCGGCCTGTCTTAGAATTCGGAGCCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCTGAGTCTCCATCACTaGCCGCGCTGTCAGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTLSLHH*PRCQSQ Trigger: CTGGCTCTGACAGCGCGGCAAGTGATGGAGACTCAG...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR CAA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCACGGCCCTCCAGCTTaGGTTCCCATTCTGTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTHGPPA*VPILSA Trigger: AGCGGACAGAATGGGAACCAAAGCTGGAGGGCCGTG...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS TCA 90 bp | TGCTCCAAACCGCTGCCGTCCACCTTGCCTGAGAGTACTACCATCTaGCTGGTTGGTGTGGGAATTAATAACATTAGTGCGAGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: CSKPLPSTLPESTTI*LVGVGINNISARGT Trigger: AGTGCCCCTCGCACTAATGTTATTAATTCCCACACCAACCAGTCAGATGGTAGTACTCTCAGGCAAGGTGGACGGCAGCGGTTTGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
||
| CDS GCA 90 bp | CTCAACCGTACTTTCTGCCAGCCCCGCCCTAGATCGGGTTCTATTTaGAATGCTATCCCTATCTCTAGTTTCTCCAGGCCGAATCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LNRTFCQPRPRSGSI*NAIPISSFSRPNPP Trigger: AGGAGGATTCGGCCTGGAGAAACTAGAGATAGGGATAGCATTGCAAATAGAACCCGATCTAGGGCGGGGCTGGCAGAAAGTACGGTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS CCA 90 bp | CCAAACCGCTGCCGTCCACCTTGCCTGAGAGTACTACCATCTGACTaGTTGGTGTGGGAATTAATAACATTAGTGCGAGGGGCACTAACT | + |
|
Preference number: 5 (lower is better) Translates to: PNRCRPPCLRVLPSD*LVWELITLVRGALT Trigger: AGTTAGTGCCCCTCGCACTAATGTTATTAATTCCCACACCAACCAGTCAGATGGTAGTACTCTCAGGCAAGGTGGACGGCAGCGGTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
||
| CDS-3UTR CAA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCATGCCAGCTGTTCCTTaGCTCTCTCTAAGCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTMPAVP*LSLSAA Trigger: AGCAGCGCTTAGAGAGAGCAAAGGAACAGCTGGCAT...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR CAA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGCTGAGTCTCCATCACTaGCCGCGCTGTCAGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNWKIPAIPTAVLGERLKLSLHH*PRCQSQ Trigger: CTGGCTCTGACAGCGCGGCAAGTGATGGAGACTCAG...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS-3UTR CAA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTTTAACCTTCCCAGAGTaGCAAATGACCCTTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPLTFPE*QMTLAQ Trigger: CTGTGCAAGGGTCATTTGCAACTCTGGGAAGGTTAA...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS GCA 90 bp | CCGTTTTCCCAAATATGTGCTGCTCCAAACCGCTGCCGTCCACCTTaGCTGAGAGTACTACCATCTGACTGGTTGGTGTGGGAATTAATA | + |
|
Preference number: 5 (lower is better) Translates to: PFSQICAAPNRCRPP*LRVLPSDWLVWELI Trigger: TATTAATTCCCACACCAACCAGTCAGATGGTAGTACTCTCAGGCAAGGTGGACGGCAGCGGTTTGGAGCAGCACATATTTGGGAAAACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
||
| CDS-3UTR CAA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTTGGTCTACCCTGCCTTaGGGAATTATGATGAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPWSTLP*GIMMNS Trigger: ACTGTTCATCATAATTCCCAAAGGCAGGGTAGACCA...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
||
| CDS CCA 90 bp | GAGTCCTCTCCATGCATTTCAGAACCTCTGTTGTCAGGGTTTATGTaGATTTCCAGGCTAAACCCGAACTCGCCACTGTTCGGGTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESSPCISEPLLSGFM*ISRLNPNSPLFGFV Trigger: AACAAACCCGAACAGTGGCGAGTTCGGGTTTAGCCTGGAAATCCACATAAACCCTGACAACAGAGGTTCTGAAATGCATGGAGAGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067837.10 ENSMUST00000161331.8 ENSMUST00000161574.8 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
||
| CDS-3UTR CAA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCTTAACCTTCCCAGAGTaGCAAATGACCCTTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTLTFPE*QMTLAQ Trigger: CTGTGCAAGGGTCATTTGCAACTCTGGGAAGGTTAA...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTCTACCATCTGACTGGTaGGTGTGGGAATTAATAACA | + |
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Preference number: 5 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPLPSDW*VWELIT Trigger: TGTTATTAATTCCCACACCAACCAGTCAGATGGTAG...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCACTGTCAACCCCGTCTaGTTCATAACTCCTGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTTVNPV*FITPGR Trigger: TCTACCAGGAGTTATGAACAAGACGGGGTTGACAGT...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGATGCCAGCTGTTCCTTaGCTCTCTCTAAGCGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SNWKIPAIPTAVLGERLKMPAVP*LSLSAA Trigger: AGCAGCGCTTAGAGAGAGCAAAGGAACAGCTGGCAT...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCTGGTCTACCCTGCCTTaGGGAATTATGATGAACAGT | + |
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Preference number: 5 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTWSTLP*GIMMNS Trigger: ACTGTTCATCATAATTCCCAAAGGCAGGGTAGACCA...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | GAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCCACCTTTGTCAATCTGCTCTTaGGTTAAACCACGAATTGGA | + |
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Preference number: 5 (lower is better) Translates to: EKRLTMKLQQHSAEQTPPLSICS*VKPRIG Trigger: TCCAATTCGTGGTTTAACCAAAGAGCAGATTGACAA...AGGTGGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCCTACCATCTGACTGGTaGGTGTGGGAATTAATAACA | + |
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Preference number: 5 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTLPSDW*VWELIT Trigger: TGTTATTAATTCCCACACCAACCAGTCAGATGGTAG...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCTGGTTAAACCACGAATaGGATCATCATCGCCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTWLNHE*DHHRLH Trigger: ATGAAGGCGATGATGATCCAATTCGTGGTTTAACCA...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | ACTCAAGAAAAGCGTTTGACTATGAAGCTCCAGCAACACAGCGCTGAGCAGACCTTGTCAATCTGCTCTTaGGTTAAACCACGAATTGGA | + |
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Preference number: 5 (lower is better) Translates to: TQEKRLTMKLQQHSAEQTLSICS*VKPRIG Trigger: TCCAATTCGTGGTTTAACCAAAGAGCAGATTGACAA...GGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTCTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGACTGTCAACCCCGTCTaGTTCATAACTCCTGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: SNWKIPAIPTAVLGERLKTVNPV*FITPGR Trigger: TCTACCAGGAGTTATGAACAAGACGGGGTTGACAGT...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGCTACCATCTGACTGGTaGGTGTGGGAATTAATAACA | + |
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Preference number: 5 (lower is better) Translates to: SNWKIPAIPTAVLGERLKLPSDW*VWELIT Trigger: TGTTATTAATTCCCACACCAACCAGTCAGATGGTAG...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS-3UTR CAA 90 bp | TCAAACTGGAAAATCCCAGCCATCCCTACTGCAGTATTAGGAGAAAGACTCAAGTGGTTAAACCACGAATaGGATCATCATCGCCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SNWKIPAIPTAVLGERLKWLNHE*DHHRLH Trigger: ATGAAGGCGATGATGATCCAATTCGTGGTTTAACCA...CTTGAGTCTTTCTCCTAATACTGCAGTAGGGATGGCTGGGATTTTCCAGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS CCA 72 bp | CCGCCCTTCCTAACTGCCTTCTACTTCTACTGCCACTaGGGCGAGCCTGGGGCGGGGCGGGCTCCCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: PPFLTAFYFYCH*GEPGAGRAPSQ Trigger: CTGTGAGGGAGCCCGCCCCGCCCCAGGCTCGCCCCAGTGGCAGTAGAAGTAGAAGGCAGTTAGGAAGGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS CCA 72 bp | AACTGCCTTCTACTTCTACTGCCACTGGGGCGAGCCTaGGGCGGGGCGGGCTCCCTCACAGCTAGCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: NCLLLLLPLGRA*GGAGSLTASIS Trigger: TGAAATGCTAGCTGTGAGGGAGCCCGCCCCGCCCCAGGCTCGCCCCAGTGGCAGTAGAAGTAGAAGGCAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS GCA 72 bp | CTTCCCAGAGTTGCAAATGACCCTTGCACAGAACCCTaGCTCCTCGCACCACGCCTGCCCCTAGGACCACTG | + |
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Preference number: 6 (lower is better) Translates to: LPRVANDPCTEP*LLAPRLPLGPL Trigger: CAGTGGTCCTAGGGGCAGGCGTGGTGCGAGGAGGCAGGGTTCTGTGCAAGGGTCATTTGCAACTCTGGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
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| CDS GCA 72 bp | GTTCCAGCCTCAACTACGCTGTCCGCCCTTCCTAACTaGCTTCTACTTCTACTGCCACTGGGGCGAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VPASTTLSALPN*LLLLLPLGRAW Trigger: CCAGGCTCGCCCCAGTGGCAGTAGAAGTAGAAGGCAGTTAGGAAGGGCGGACAGCGTAGTTGAGGCTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS GCA 72 bp | CCATTCCTTAACCTTCCCAGAGTTGCAAATGACCCTTaGACAGAACCCTGCCTCCTCGCACCACGCCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: PFLNLPRVANDP*TEPCLLAPRLP Trigger: GGGCAGGCGTGGTGCGAGGAGGCAGGGTTCTGTGCAAGGGTCATTTGCAACTCTGGGAAGGTTAAGGAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
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| CDS CCA 72 bp | TCACAGCTAGCATTTCAGCACCGTCCTGGGCCTGACTaGCCTGTGAGGACGCTCTTCCATGCTGACCACTGT | + |
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Preference number: 6 (lower is better) Translates to: SQLAFQHRPGPD*PVRTLFHADHC Trigger: ACAGTGGTCAGCATGGAAGAGCGTCCTCACAGGCCAGTCAGGCCCAGGACGGTGCTGAAATGCTAGCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS GCA 72 bp | GTGGAAGCCCCCACTGGTGCTCTCAACCGTACTTTCTaGCAGCCCCGCCCTAGATCGGGTTCTATTTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: VEAPTGALNRTF*QPRPRSGSICN Trigger: ATTGCAAATAGAACCCGATCTAGGGCGGGGCTGGCAGAAAGTACGGTTGAGAGCACCAGTGGGGGCTTCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS TCA 72 bp | GCAGCTGCCGGAGCTTGTTCCCAGCCACGTAGTCACTaGTGCACACGCTACACACCTTACCTAACTCACTGT | + |
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Preference number: 6 (lower is better) Translates to: AAAGACSQPRSH*CTRYTPYLTHC Trigger: ACAGTGAGTTAGGTAAGGTGTGTAGCGTGTGCATCAGTGACTACGTGGCTGGGAACAAGCTCCGGCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS GCA 72 bp | GCCCCGTTTTCCCAAATATGTGCTGCTCCAAACCGCTaGCGTCCACCTTGCCTGAGAGTACTACCATCTGAC | + |
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Preference number: 6 (lower is better) Translates to: APFSQICAAPNR*RPPCLRVLPSD Trigger: GTCAGATGGTAGTACTCTCAGGCAAGGTGGACGGCAGCGGTTTGGAGCAGCACATATTTGGGAAAACGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
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| CDS CAA 90 bp | GAACACCAAGGGCTACTCCAATTCCATTCCTTAACCTTCCCAGAGTaGCAAATGACCCTTGCACAGAACCCTGCCTCCTCGCACCACGCC | + |
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Preference number: 6 (lower is better) Translates to: EHQGLLQFHSLTFPE*QMTLAQNPASSHHA Trigger: GGCGTGGTGCGAGGAGGCAGGGTTCTGTGCAAGGGTCATTTGCAACTCTGGGAAGGTTAAGGAATGGAATTGGAGTAGCCCTTGGTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
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| CDS TCA 72 bp | CCACGTCATTCTCAGAAATCCTGCGAAGAGGAACTGTaGTGGTGCTCACGTAGGTTCGGACACCTGAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: PRHSQKSCEEEL*WCSRRFGHLSA Trigger: AGCGCTCAGGTGTCCGAACCTACGTGAGCACCATCACAGTTCCTCTTCGCAGGATTTCTGAGAATGACGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS GCA 72 bp | CAAATATGTGCTGCTCCAAACCGCTGCCGTCCACCTTaGCTGAGAGTACTACCATCTGACTGGTTGGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: QICAAPNRCRPP*LRVLPSDWLVW Trigger: CCACACCAACCAGTCAGATGGTAGTACTCTCAGGCAAGGTGGACGGCAGCGGTTTGGAGCAGCACATATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
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| CDS GCA 72 bp | ACTTTCTGCCAGCCCCGCCCTAGATCGGGTTCTATTTaGAATGCTATCCCTATCTCTAGTTTCTCCAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: TFCQPRPRSGSI*NAIPISSFSRP Trigger: CGGCCTGGAGAAACTAGAGATAGGGATAGCATTGCAAATAGAACCCGATCTAGGGCGGGGCTGGCAGAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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| CDS GCA 72 bp | ACACCTGACAGAGGGATGTCCGTCGAGTCCTCTCCATaGATTTCAGAACCTCTGTTGTCAGGGTTTATGTGG | + |
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Preference number: 6 (lower is better) Translates to: TPDRGMSVESSP*ISEPLLSGFMW Trigger: CCACATAAACCCTGACAACAGAGGTTCTGAAATGCATGGAGAGGACTCGACGGACATCCCTCTGTCAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067837.10 ENSMUST00000161574.8 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
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| CDS GCA 72 bp | TGTAACATTACTTCTAGCCCCGTTTTCCCAAATATGTaGTGCTCCAAACCGCTGCCGTCCACCTTGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: CNITSSPVFPNM*CSKPLPSTLPE Trigger: CTCAGGCAAGGTGGACGGCAGCGGTTTGGAGCAGCACATATTTGGGAAAACGGGGCTAGAAGTAATGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
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| CDS CCA 72 bp | TGCCGTCCACCTTGCCTGAGAGTACTACCATCTGACTaGTTGGTGTGGGAATTAATAACATTAGTGCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: CRPPCLRVLPSD*LVWELITLVRG Trigger: CCCTCGCACTAATGTTATTAATTCCCACACCAACCAGTCAGATGGTAGTACTCTCAGGCAAGGTGGACGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
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| CDS CAA 72 bp | CGTCCACCTTGCCTGAGAGTACTACCATCTGACTGGTaGGTGTGGGAATTAATAACATTAGTGCGAGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RPPCLRVLPSDW*VWELITLVRGA Trigger: TGCCCCTCGCACTAATGTTATTAATTCCCACACCAACCAGTCAGATGGTAGTACTCTCAGGCAAGGTGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000162219.2 ENSMUST00000169407.9 |
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| CDS GCA 72 bp | TCAGTTCTAGGTACACCTCTGGTAAACGTTGGCCATTaGTTTGATTCTCTGACGCAGGCTCCACCTCCATTA | + |
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Preference number: 6 (lower is better) Translates to: SVLGTPLVNVGH*FDSLTQAPPPL Trigger: TAATGGAGGTGGAGCCTGCGTCAGAGAATCAAAGCAATGGCCAACGTTTACCAGAGGTGTACCTAGAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067837.10 ENSMUST00000161859.8 ENSMUST00000169407.9 |
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