RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF44 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034928

Ensembl transcript IDs: ENSMUST00000037422.16, ENSMUST00000125871.8, ENSMUST00000125927.8, ENSMUST00000126717.8, ENSMUST00000128257.8, ENSMUST00000129881.8, ENSMUST00000134862.8, ENSMUST00000150626.2, ENSMUST00000150806.8, ENSMUST00000177950.8

Found 440 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TATTGCAGGGGCTTCTCCAGACTGACCCTGGCACCAGCTCTGGAGTaGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCC +
Preference number: 1 (lower is better)
Translates to: YCRGFSRLTLAPALE*QVGTLTGLAPPSQS
Trigger: GGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGTCTGGAGAAGCCCCTGCAATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 90 bp GGCTGGGATACTCTCCAGCCTGGGGGTGGGCTGGAACGCTGTGCCTaGGGTAAGGGTCCTGGGGAGTCAGACCCACACCACACAGCAGTG +
Preference number: 1 (lower is better)
Translates to: GWDTLQPGGGLERCA*GKGPGESDPHHTAV
Trigger: CACTGCTGTGTGGTGTGGGTCTGACTCCCCAGGACCCTTACCCCAGGCACAGCGTTCCAGCCCACCCCCAGGCTGGAGAGTATCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 90 bp AACGAGGGTGGTTGGAGCATCCCTGAGGCAGCAGGCGCCAATGGCTaGCTGCTAGGATGTGCCGGCCCCACACGCGGTTCGTTCACTCCA +
Preference number: 1 (lower is better)
Translates to: NEGGWSIPEAAGANG*LLGCAGPTRGSFTP
Trigger: TGGAGTGAACGAACCGCGTGTGGGGCCGGCACATCCTAGCAGGCAGCCATTGGCGCCTGCTGCCTCAGGGATGCTCCAACCACCCTCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 90 bp ACACACTCATGTGGAGGCCTGGTGTGGCAGAACCGGACCCTACTCTaGCCCCTGGGCATTTGGTCCCGGTTGGTCCCTATGCCCCCACTC +
Preference number: 1 (lower is better)
Translates to: THSCGGLVWQNRTLL*PLGIWSRLVPMPPL
Trigger: GAGTGGGGGCATAGGGACCAACCGGGACCAAATGCCCAGGGGGCAGAGTAGGGTCCGGTTCTGCCACACCAGGCCTCCACATGAGTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR TCA 90 bp GCGCAGCAACCCCAGTTGGCGGTAGGAAAGGAAAGGAGTGGGACCTaGAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGC +
Preference number: 1 (lower is better)
Translates to: AQQPQLAVGKERSGT*KEGKEHSLLQTLEG
Trigger: GCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCCCACTCCTTTCCTTTCCTACCGCCAACTGGGGTTGCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 90 bp GCTACTGCAGAACACAATGTATCCAGCTTGGAGCCCTGGCCCATTTaGTCATGGAGCCTGGCTGGGATACTCTCCAGCCTGGGGGTGGGC +
Preference number: 1 (lower is better)
Translates to: ATAEHNVSSLEPWPI*SWSLAGILSSLGVG
Trigger: GCCCACCCCCAGGCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCTGGATACATTGTGTTCTGCAGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 90 bp CTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCACACTTaGGGAATGGACTCCTGCCTCCCAGAGCCAGCAGGAAGAAGGACC +
Preference number: 1 (lower is better)
Translates to: LCPSGVWGNHTSHHT*GMDSCLPEPAGRRT
Trigger: GGTCCTTCTTCCTGCTGGCTCTGGGAGGCAGGAGTCCATTCCCCAAGTGTGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 90 bp GGCCTGGTGTGGCAGAACCGGACCCTACTCTGCCCCCTGGGCATTTaGTCCCGGTTGGTCCCTATGCCCCCACTCCTATTAAACCAAAGA +
Preference number: 1 (lower is better)
Translates to: GLVWQNRTLLCPLGI*SRLVPMPPLLLNQR
Trigger: TCTTTGGTTTAATAGGAGTGGGGGCATAGGGACCAACCGGGACCAAATGCCCAGGGGGCAGAGTAGGGTCCGGTTCTGCCACACCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 90 bp CTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTaGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGG +
Preference number: 1 (lower is better)
Translates to: LCLSGTKQENSGNGL*LLPAHTPGNPTRAG
Trigger: CCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 90 bp CAGCCACCAGGAACACAAGAACATGCCCAGATCGCTCGAGGCTACTaGAGAACACAATGTATCCAGCTTGGAGCCCTGGCCCATTTGCTC +
Preference number: 1 (lower is better)
Translates to: QPPGTQEHAQIARGY*RTQCIQLGALAHLL
Trigger: GAGCAAATGGGCCAGGGCTCCAAGCTGGATACATTGTGTTCTGCAGTAGCCTCGAGCGATCTGGGCATGTTCTTGTGTTCCTGGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 90 bp TGGGGAGTCAGACCCACACCACACAGCAGTGGAGGCAGAGCTGACTaGCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGT +
Preference number: 1 (lower is better)
Translates to: WGVRPTPHSSGGRAD*LCLSGTKQENSGNG
Trigger: ACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAGCTCTGCCTCCACTGCTGTGTGGTGTGGGTCTGACTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGACTCAGGCAGCTCCGTaGCGGGCAGGCAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLTQAAP*RAGRQA
Trigger: TGCCTGCCTGCCTGCCCGCCACGGAGCTGCCTGAGT...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR TCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGGGCAGGTGGGAACGCTaGCAGGCCTGGCCCCGCCCT +
Preference number: 2 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRGRWER*QAWPRP
Trigger: AGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCC...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR TCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGGGGGCTTCTCCAGACTaGCCCTGGCACCAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLGASPD*PWHQLW
Trigger: CCAGAGCTGGTGCCAGGGTCAGTCTGGAGAAGCCCC...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGACTCAGGCAGCTCCGTaGCGGGCAGGCAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRTQAAP*RAGRQA
Trigger: TGCCTGCCTGCCTGCCCGCCACGGAGCTGCCTGAGT...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR GCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGGCAGGCGCCAATGGCTaGCTGCTAGGATGTGCCGGC +
Preference number: 2 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLAGANG*LLGCAG
Trigger: GCCGGCACATCCTAGCAGGCAGCCATTGGCGCCTGC...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGCCGCACACACTCATGTaGAGGCCTGGTGTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLPHTLM*RPGVAE
Trigger: TTCTGCCACACCAGGCCTCCACATGAGTGTGTGCGG...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGACTCACCCAGGCAGGTaGGACACAGGCCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLTHPGR*DTGPGW
Trigger: CCAGCCAGGGCCTGTGTCCCACCTGCCTGGGTGAGT...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCACTCAGGCAGCTCCGTaGCGGGCAGGCAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: SLEPWPICSWSLAGILSSTQAAP*RAGRQA
Trigger: TGCCTGCCTGCCTGCCCGCCACGGAGCTGCCTGAGT...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGAGAAGCAGACTGAGTTaGGGAAACTCAGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLRSRLS*GNSGSS
Trigger: GGAGCTGCCTGAGTTTCCCCAACTCAGTCTGCTTCT...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGCTCATGGAGCCTGGCTaGGATACTCTCCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPLMEPG*DTLQPG
Trigger: CCCAGGCTGGAGAGTATCCCAGCCAGGCTCCATGAG...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGTGCCCCCTGGGCATTTaGTCCCGGTTGGTCCCTATG +
Preference number: 2 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLCPLGI*SRLVPM
Trigger: CATAGGGACCAACCGGGACCAAATGCCCAGGGGGCA...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGACCACACTTGGGGAATaGACTCCTGCCTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPTTLGE*TPASQS
Trigger: GCTCTGGGAGGCAGGAGTCCATTCCCCAAGTGTGGT...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGACCACACTTGGGGAATaGACTCCTGCCTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRTTLGE*TPASQS
Trigger: GCTCTGGGAGGCAGGAGTCCATTCCCCAAGTGTGGT...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGTGTCCGTCTGGGGTCTaGGGAAATCACACCAGCCAC +
Preference number: 2 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPCPSGV*GNHTSH
Trigger: GTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACA...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAACTCACCCAGGCAGGTaGGACACAGGCCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: GPERRVRNTASSRPWRAGTHPGR*DTGPGW
Trigger: CCAGCCAGGGCCTGTGTCCCACCTGCCTGGGTGAGT...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR GCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCTGGGGAATGGACTCCTaGCTCCCAGAGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: SLEPWPICSWSLAGILSSWGMDS*LPEPAG
Trigger: TCCTGCTGGCTCTGGGAGGCAGGAGTCCATTCCCCA...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR GCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGGGAGGCAGAGCTGACTaGCTATGTCTGTCTGGAACC +
Preference number: 2 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLGGRAD*LCLSGT
Trigger: GGTTCCAGACAGACATAGGCAGTCAGCTCTGCCTCC...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCGCACCAGCTCTGGAGTaGCAGGTGGGAACGCTGACA +
Preference number: 2 (lower is better)
Translates to: SLEPWPICSWSLAGILSSAPALE*QVGTLT
Trigger: TGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGC...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCGGCAGGCAGGCAGACTaGGGAAGGAGTCTTTGGAGC +
Preference number: 2 (lower is better)
Translates to: SLEPWPICSWSLAGILSSGRQAD*GRSLWS
Trigger: GCTCCAAAGACTCCTTCCCCAGTCTGCCTGCCTGCC...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAGGATACTCTCCAGCCTaGGGGTGGGCTGGAACGCTG +
Preference number: 2 (lower is better)
Translates to: GPERRVRNTASSRPWRAGGYSPA*GWAGTL
Trigger: CAGCGTTCCAGCCCACCCCCAGGCTGGAGAGTATCC...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGGGAAGGGATGGGGGTTaGAGAAGGTGGTTCTCTGTG +
Preference number: 2 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLGRDGG*RRWFSV
Trigger: CACAGAGAACCACCTTCTCCAACCCCCATCCCTTCC...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CAA 90 bp GGCTACTGCAGAACACAATGTATCCAGCTTGGAGCCCTGGCCCATTaGCTCATGGAGCCTGGCTGGGATACTCTCCAGCCTGGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: GYCRTQCIQLGALAH*LMEPGWDTLQPGGG
Trigger: CCCACCCCCAGGCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCTGGATACATTGTGTTCTGCAGTAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CAA 90 bp AGGCCTGGTGTGGCAGAACCGGACCCTACTCTGCCCCCTGGGCATTaGGTCCCGGTTGGTCCCTATGCCCCCACTCCTATTAAACCAAAG +
Preference number: 2 (lower is better)
Translates to: RPGVAEPDPTLPPGH*VPVGPYAPTPIKPK
Trigger: CTTTGGTTTAATAGGAGTGGGGGCATAGGGACCAACCGGGACCAAATGCCCAGGGGGCAGAGTAGGGTCCGGTTCTGCCACACCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR TCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTGGGGCTTCTCCAGACTaGCCCTGGCACCAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGGASPD*PWHQLW
Trigger: CCAGAGCTGGTGCCAGGGTCAGTCTGGAGAAGCCCC...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR GCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGTCCATGAGCCAATTCTaGTGCCCCAGGAACCACAAG +
Preference number: 2 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLSMSQF*CPRNHK
Trigger: CTTGTGGTTCCTGGGGCAGCAGAATTGGCTCATGGA...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGGGAGAACTCAGGAAATaGTCTCTGGCTACTCCCTGC +
Preference number: 2 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPGELRK*SLATPC
Trigger: GCAGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCC...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGGGAGAACTCAGGAAATaGTCTCTGGCTACTCCCTGC +
Preference number: 2 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLGELRK*SLATPC
Trigger: GCAGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCC...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGACTCATGGAGCCTGGCTaGGATACTCTCCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GPERRVRNTASSRPWRAGLMEPG*DTLQPG
Trigger: CCCAGGCTGGAGAGTATCCCAGCCAGGCTCCATGAG...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR GCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGATGGGGAATGGACTCCTaGCTCCCAGAGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRWGMDS*LPEPAG
Trigger: TCCTGCTGGCTCTGGGAGGCAGGAGTCCATTCCCCA...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR GCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCATGGGGAATGGACTCCTaGCTCCCAGAGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPWGMDS*LPEPAG
Trigger: TCCTGCTGGCTCTGGGAGGCAGGAGTCCATTCCCCA...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR GCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGAACCGGACCCTACTCTaGCCCCTGGGCATTTGGTCC +
Preference number: 2 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRNRTLL*PLGIWS
Trigger: GGACCAAATGCCCAGGGGGCAGAGTAGGGTCCGGTT...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGGGAGTCTTTGGAGCTTaGCAATGCAGGGGCTTATTG +
Preference number: 2 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPGVFGA*QCRGLL
Trigger: CAATAAGCCCCTGCATTGCCAAGCTCCAAAGACTCC...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAGGCAGGCAGGCAGACTaGGGAAGGAGTCTTTGGAGC +
Preference number: 2 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRGRQAD*GRSLWS
Trigger: GCTCCAAAGACTCCTTCCCCAGTCTGCCTGCCTGCC...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGGGCAGGCAGGCAGACTaGGGAAGGAGTCTTTGGAGC +
Preference number: 2 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRGRQAD*GRSLWS
Trigger: GCTCCAAAGACTCCTTCCCCAGTCTGCCTGCCTGCC...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAACCAGCCACCACACTTaGGGAATGGACTCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: GPERRVRNTASSRPWRAGTSHHT*GMDSCL
Trigger: GAGGCAGGAGTCCATTCCCCAAGTGTGGTGGCTGGT...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR TCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGCAGTGGAGGCAGAGCTaGCTGCCTATGTCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRQWRQS*LPMSVW
Trigger: CCAGACAGACATAGGCAGTCAGCTCTGCCTCCACTG...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR TCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACCAAACTCCGCCCTGTaGCTTCCAGCCACCCAGATA +
Preference number: 2 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRPNSAL*LPATQI
Trigger: TATCTGGGTGGCTGGAAGTCACAGGGCGGAGTTTGG...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAACCACACTTGGGGAATaGACTCCTGCCTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRTTLGE*TPASQS
Trigger: GCTCTGGGAGGCAGGAGTCCATTCCCCAAGTGTGGT...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAGACACAGGCCCTGGCTaGAGAGGAGATGCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRDTGPG*RGDALK
Trigger: TTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTC...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR GCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAAATGCAGGGGCTTATTaGAGGGGCTTCTCCAGACTG +
Preference number: 2 (lower is better)
Translates to: GPERRVRNTASSRPWRAGNAGAY*RGFSRL
Trigger: CAGTCTGGAGAAGCCCCTGCAATAAGCCCCTGCATT...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCATGGGGAAGGAGTCTTTaGAGCTTGGCAATGCAGGGG +
Preference number: 2 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPWGRSL*SLAMQG
Trigger: CCCCTGCATTGCCAAGCTCCAAAGACTCCTTCCCCA...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGATGGGGAAGGAGTCTTTaGAGCTTGGCAATGCAGGGG +
Preference number: 2 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRWGRSL*SLAMQG
Trigger: CCCCTGCATTGCCAAGCTCCAAAGACTCCTTCCCCA...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGATGGCCCATTTGCTCATaGAGCCTGGCTGGGATACTC +
Preference number: 2 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRWPICS*SLAGIL
Trigger: GAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCA...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTTGGGGAAGGAGTCTTTaGAGCTTGGCAATGCAGGGG +
Preference number: 2 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGWGRSL*SLAMQG
Trigger: CCCCTGCATTGCCAAGCTCCAAAGACTCCTTCCCCA...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGAGAAGCAGACTGAGTTaGGGAAACTCAGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRRSRLS*GNSGSS
Trigger: GGAGCTGCCTGAGTTTCCCCAACTCAGTCTGCTTCT...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAGGAGAACTCAGGAAATaGTCTCTGGCTACTCCCTGC +
Preference number: 2 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRGELRK*SLATPC
Trigger: GCAGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCC...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCCTGCCTATGTCTGTCTaGAACCAAACAGGAGAACTC +
Preference number: 2 (lower is better)
Translates to: SLEPWPICSWSLAGILSSLPMSV*NQTGEL
Trigger: GAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAG...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAGTGCAGTACAGTGCATaGCAGTTATCAGCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: GPERRVRNTASSRPWRAGVQYSA*QLSAEH
Trigger: GTGCTCAGCTGATAACTGCCATGCACTGTACTGCAC...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTGCACCAGCTCTGGAGTaGCAGGTGGGAACGCTGACA +
Preference number: 2 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPAPALE*QVGTLT
Trigger: TGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGC...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGACTGCCTATGTCTGTCTaGAACCAAACAGGAGAACTC +
Preference number: 2 (lower is better)
Translates to: GPERRVRNTASSRPWRAGLPMSV*NQTGEL
Trigger: GAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAG...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR GCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAATCGCTCGAGGCTACTaGAGAACACAATGTATCCAG +
Preference number: 2 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRIARGY*RTQCIQ
Trigger: CTGGATACATTGTGTTCTGCAGTAGCCTCGAGCGAT...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp CTGACTGCCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGCACCAGCTCTGGAGTaGCAGGTGGGAACGCTGACA +
Preference number: 2 (lower is better)
Translates to: LTAYVCLEPNRRTQEMVSAPALE*QVGTLT
Trigger: TGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGC...AGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTACCAGCCACCACACTTaGGGAATGGACTCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPTSHHT*GMDSCL
Trigger: GAGGCAGGAGTCCATTCCCCAAGTGTGGTGGCTGGT...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp CTGACTGCCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTTGTCCGTCTGGGGTCTaGGGAAATCACACCAGCCAC +
Preference number: 2 (lower is better)
Translates to: LTAYVCLEPNRRTQEMVSCPSGV*GNHTSH
Trigger: GTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACA...AGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR GCA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGGCAGGCGCCAATGGCTaGCTGCTAGGATGTGCCGGC +
Preference number: 2 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGAGANG*LLGCAG
Trigger: GCCGGCACATCCTAGCAGGCAGCCATTGGCGCCTGC...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGGTGGGACACAGGCCCTaGCTGGAGAGGAGATGCCCT +
Preference number: 2 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGVGHRP*LERRCP
Trigger: AGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGGCACCAGCTCTGGAGTaGCAGGTGGGAACGCTGACA +
Preference number: 2 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGAPALE*QVGTLT
Trigger: TGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGC...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGACCAGCCACCACACTTaGGGAATGGACTCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGTSHHT*GMDSCL
Trigger: GAGGCAGGAGTCCATTCCCCAAGTGTGGTGGCTGGT...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR GCA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGAATGCAGGGGCTTATTaGAGGGGCTTCTCCAGACTG +
Preference number: 2 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGNAGAY*RGFSRL
Trigger: CAGTCTGGAGAAGCCCCTGCAATAAGCCCCTGCATT...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGAGAAGCAGACTGAGTTaGGGAAACTCAGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGRSRLS*GNSGSS
Trigger: GGAGCTGCCTGAGTTTCCCCAACTCAGTCTGCTTCT...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGGTGCAGTACAGTGCATaGCAGTTATCAGCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGVQYSA*QLSAEH
Trigger: GTGCTCAGCTGATAACTGCCATGCACTGTACTGCAC...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CCA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGCTGCCTATGTCTGTCTaGAACCAAACAGGAGAACTC +
Preference number: 2 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGLPMSV*NQTGEL
Trigger: GAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAG...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp GGCTTCTCCAGACTGACCCTGGCACCAGCTCTGGAGTaGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCC +
Preference number: 3 (lower is better)
Translates to: GFSRLTLAPALE*QVGTLTGLAPP
Trigger: GGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGTCTGGAGAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCCCCAATTCCGGAGCTTaGGGCAGGGATCTCGTGGGT +
Preference number: 3 (lower is better)
Translates to: GTSSGVAGGNADRPGPALPNSGA*GRDLVG
Trigger: ACCCACGAGATCCCTGCCCAAAGCTCCGGAATTGGG...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 72 bp GGTTGGAGCATCCCTGAGGCAGCAGGCGCCAATGGCTaGCTGCTAGGATGTGCCGGCCCCACACGCGGTTCG +
Preference number: 3 (lower is better)
Translates to: GWSIPEAAGANG*LLGCAGPTRGS
Trigger: CGAACCGCGTGTGGGGCCGGCACATCCTAGCAGGCAGCCATTGGCGCCTGCTGCCTCAGGGATGCTCCAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCAATTCCGGAGCTTaGGGCAGGGATCTCGTGGGT +
Preference number: 3 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPPNSGA*GRDLVG
Trigger: ACCCACGAGATCCCTGCCCAAAGCTCCGGAATTGGG...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp ACTCTCCAGCCTGGGGGTGGGCTGGAACGCTGTGCCTaGGGTAAGGGTCCTGGGGAGTCAGACCCACACCAC +
Preference number: 3 (lower is better)
Translates to: TLQPGGGLERCA*GKGPGESDPHH
Trigger: GTGGTGTGGGTCTGACTCCCCAGGACCCTTACCCCAGGCACAGCGTTCCAGCCCACCCCCAGGCTGGAGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp GCCTGGTGTGGCAGAACCGGACCCTACTCTGCCCCCTaGGCATTTGGTCCCGGTTGGTCCCTATGCCCCCAC +
Preference number: 3 (lower is better)
Translates to: AWCGRTGPYSAP*AFGPGWSLCPH
Trigger: GTGGGGGCATAGGGACCAACCGGGACCAAATGCCCAGGGGGCAGAGTAGGGTCCGGTTCTGCCACACCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 72 bp TGTGGAGGCCTGGTGTGGCAGAACCGGACCCTACTCTaGCCCCTGGGCATTTGGTCCCGGTTGGTCCCTATG +
Preference number: 3 (lower is better)
Translates to: CGGLVWQNRTLL*PLGIWSRLVPM
Trigger: CATAGGGACCAACCGGGACCAAATGCCCAGGGGGCAGAGTAGGGTCCGGTTCTGCCACACCAGGCCTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 72 bp AGGCAGGTGGGACACAGGCCCTGGCTGGAGAGGAGATaGCCTGAAAAGCAGACGGTCCCGGTAGGCTCTAGG +
Preference number: 3 (lower is better)
Translates to: RQVGHRPWLERR*PEKQTVPVGSR
Trigger: CCTAGAGCCTACCGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCACCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGCCCAATTCCGGAGCTTaGGGCAGGGATCTCGTGGGT +
Preference number: 3 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPPNSGA*GRDLVG
Trigger: ACCCACGAGATCCCTGCCCAAAGCTCCGGAATTGGG...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGCAATGCAGGGGCTTATaGCAGGGGCTTCTCCAGACT +
Preference number: 3 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPQCRGL*QGLLQT
Trigger: AGTCTGGAGAAGCCCCTGCAATAAGCCCCTGCATTG...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGACTGCCCCCTGGGCATTaGGTCCCGGTTGGTCCCTAT +
Preference number: 3 (lower is better)
Translates to: GPERRVRNTASSRPWRAGLPPGH*VPVGPY
Trigger: ATAGGGACCAACCGGGACCAAATGCCCAGGGGGCAG...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp AGAAGGACCCAGGGGCAGATAAGAAGCAGACTGAGTTaGGGAAACTCAGGCAGCTCCGTGGCGGGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: RRTQGQIRSRLS*GNSGSSVAGRQ
Trigger: CTGCCTGCCCGCCACGGAGCTGCCTGAGTTTCCCCAACTCAGTCTGCTTCTTATCTGCCCCTGGGTCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp TCTGGGGTCTGGGGAAATCACACCAGCCACCACACTTaGGGAATGGACTCCTGCCTCCCAGAGCCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: SGVWGNHTSHHT*GMDSCLPEPAG
Trigger: TCCTGCTGGCTCTGGGAGGCAGGAGTCCATTCCCCAAGTGTGGTGGCTGGTGTGATTTCCCCAGACCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp TCTAACACAGAACACAGGCGCTGGGCCCAGCAGTGCTaGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAA +
Preference number: 3 (lower is better)
Translates to: SNTEHRRWAQQC*GKVPTVMPRPE
Trigger: TTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCCAGCGCCTGTGTTCTGTGTTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGAAGAAGCAGACTGAGTaGGGGAAACTCAGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLKKQTE*GKLRQL
Trigger: GAGCTGCCTGAGTTTCCCCAACTCAGTCTGCTTCTT...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTGCCCCCTGGGCATTaGGTCCCGGTTGGTCCCTAT +
Preference number: 3 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRLPPGH*VPVGPY
Trigger: ATAGGGACCAACCGGGACCAAATGCCCAGGGGGCAG...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp GCCACCCAGATAAAGTTCCAGCCGCACACACTCATGTaGAGGCCTGGTGTGGCAGAACCGGACCCTACTCTG +
Preference number: 3 (lower is better)
Translates to: ATQIKFQPHTLM*RPGVAEPDPTL
Trigger: CAGAGTAGGGTCCGGTTCTGCCACACCAGGCCTCCACATGAGTGTGTGCGGCTGGAACTTTATCTGGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCCAATGCAGGGGCTTATaGCAGGGGCTTCTCCAGACT +
Preference number: 3 (lower is better)
Translates to: SLEPWPICSWSLAGILSSQCRGL*QGLLQT
Trigger: AGTCTGGAGAAGCCCCTGCAATAAGCCCCTGCATTG...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGAGGAGTCTTTGGAGCTaGGCAATGCAGGGGCTTATT +
Preference number: 3 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPRSLWS*AMQGLI
Trigger: AATAAGCCCCTGCATTGCCAAGCTCCAAAGACTCCT...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGCACCAGCCACCACACTaGGGGAATGGACTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRHQPPH*GNGLLP
Trigger: AGGCAGGAGTCCATTCCCCAAGTGTGGTGGCTGGTG...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTCCCAATTCCGGAGCTTaGGGCAGGGATCTCGTGGGT +
Preference number: 3 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGPNSGA*GRDLVG
Trigger: ACCCACGAGATCCCTGCCCAAAGCTCCGGAATTGGG...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGCTGGGGAAGGAGTCTTaGGAGCTTGGCAATGCAGGG +
Preference number: 3 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRLGKES*ELGNAG
Trigger: CCCTGCATTGCCAAGCTCCAAAGACTCCTTCCCCAG...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTCACCAGCCACCACACTaGGGGAATGGACTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGHQPPH*GNGLLP
Trigger: AGGCAGGAGTCCATTCCCCAAGTGTGGTGGCTGGTG...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGACACAATGTATCCAGCTaGGAGCCCTGGCCCATTTGC +
Preference number: 3 (lower is better)
Translates to: GPERRVRNTASSRPWRAGHNVSS*EPWPIC
Trigger: GCAAATGGGCCAGGGCTCCAAGCTGGATACATTGTG...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR TCA 72 bp CCCCAGTTGGCGGTAGGAAAGGAAAGGAGTGGGACCTaGAAGGAGGGTAAGGAACACAGCCTCCTCCAGACC +
Preference number: 3 (lower is better)
Translates to: PQLAVGKERSGT*KEGKEHSLLQT
Trigger: GGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCCCACTCCTTTCCTTTCCTACCGCCAACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp TCTGGGGAAATCACACCAGCCACCACACTTGGGGAATaGACTCCTGCCTCCCAGAGCCAGCAGGAAGAAGGA +
Preference number: 3 (lower is better)
Translates to: SGEITPATTLGE*TPASQSQQEEG
Trigger: TCCTTCTTCCTGCTGGCTCTGGGAGGCAGGAGTCCATTCCCCAAGTGTGGTGGCTGGTGTGATTTCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp GACCCAGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTaGGGAAATCACACCAGCCACCACACTTGGGGAATG +
Preference number: 3 (lower is better)
Translates to: DPGWLFLCPSGV*GNHTSHHTWGM
Trigger: CATTCCCCAAGTGTGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp CGCTCGAGGCTACTGCAGAACACAATGTATCCAGCTTaGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTG +
Preference number: 3 (lower is better)
Translates to: RSRLLQNTMYPA*SPGPFAHGAWL
Trigger: CAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCTGGATACATTGTGTTCTGCAGTAGCCTCGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCAGGAGTCTTTGGAGCTaGGCAATGCAGGGGCTTATT +
Preference number: 3 (lower is better)
Translates to: SLEPWPICSWSLAGILSSRSLWS*AMQGLI
Trigger: AATAAGCCCCTGCATTGCCAAGCTCCAAAGACTCCT...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGCACAATGTATCCAGCTaGGAGCCCTGGCCCATTTGC +
Preference number: 3 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRHNVSS*EPWPIC
Trigger: GCAAATGGGCCAGGGCTCCAAGCTGGATACATTGTG...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 72 bp AAGGAGTCTTTGGAGCTTGGCAATGCAGGGGCTTATTaGAGGGGCTTCTCCAGACTGACCCTGGCACCAGCT +
Preference number: 3 (lower is better)
Translates to: KESLELGNAGAY*RGFSRLTLAPA
Trigger: AGCTGGTGCCAGGGTCAGTCTGGAGAAGCCCCTGCAATAAGCCCCTGCATTGCCAAGCTCCAAAGACTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 72 bp GAACACAATGTATCCAGCTTGGAGCCCTGGCCCATTTaGTCATGGAGCCTGGCTGGGATACTCTCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: EHNVSSLEPWPI*SWSLAGILSSL
Trigger: CAGGCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCTGGATACATTGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 72 bp ACTGGTGGAGGGGCAGCCACCAGGAACACAAGAACATaGCCAGATCGCTCGAGGCTACTGCAGAACACAATG +
Preference number: 3 (lower is better)
Translates to: TGGGAATRNTRT*PDRSRLLQNTM
Trigger: CATTGTGTTCTGCAGTAGCCTCGAGCGATCTGGGCATGTTCTTGTGTTCCTGGTGGCTGCCCCTCCACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTCAATGCAGGGGCTTATaGCAGGGGCTTCTCCAGACT +
Preference number: 3 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGQCRGL*QGLLQT
Trigger: AGTCTGGAGAAGCCCCTGCAATAAGCCCCTGCATTG...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGAAGAAGCAGACTGAGTaGGGGAAACTCAGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRKKQTE*GKLRQL
Trigger: GAGCTGCCTGAGTTTCCCCAACTCAGTCTGCTTCTT...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 72 bp GGAACACAAGAACATGCCCAGATCGCTCGAGGCTACTaGAGAACACAATGTATCCAGCTTGGAGCCCTGGCC +
Preference number: 3 (lower is better)
Translates to: GTQEHAQIARGY*RTQCIQLGALA
Trigger: GGCCAGGGCTCCAAGCTGGATACATTGTGTTCTGCAGTAGCCTCGAGCGATCTGGGCATGTTCTTGTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp GCTACTGCAGAACACAATGTATCCAGCTTGGAGCCCTaGCCCATTTGCTCATGGAGCCTGGCTGGGATACTC +
Preference number: 3 (lower is better)
Translates to: ATAEHNVSSLEP*PICSWSLAGIL
Trigger: GAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCTGGATACATTGTGTTCTGCAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTCACCAGCCACCACACTaGGGGAATGGACTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPHQPPH*GNGLLP
Trigger: AGGCAGGAGTCCATTCCCCAAGTGTGGTGGCTGGTG...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR TCA 72 bp AGTCAGACCCACACCACACAGCAGTGGAGGCAGAGCTaGCTGCCTATGTCTGTCTGGAACCAAACAGGAGAA +
Preference number: 3 (lower is better)
Translates to: SQTHTTQQWRQS*LPMSVWNQTGE
Trigger: TTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAGCTCTGCCTCCACTGCTGTGTGGTGTGGGTCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 72 bp AGACCCACACCACACAGCAGTGGAGGCAGAGCTGACTaGCTATGTCTGTCTGGAACCAAACAGGAGAACTCA +
Preference number: 3 (lower is better)
Translates to: RPTPHSSGGRAD*LCLSGTKQENS
Trigger: TGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAGCTCTGCCTCCACTGCTGTGTGGTGTGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR GCA 72 bp GAAAAGCAGACGGTCCCGGTAGGCTCTAGGGACATGTaGAGTACAGTGCATGGCAGTTATCAGCTGAGCACA +
Preference number: 3 (lower is better)
Translates to: EKQTVPVGSRDM*STVHGSYQLST
Trigger: TGTGCTCAGCTGATAACTGCCATGCACTGTACTGCACATGTCCCTAGAGCCTACCGGGACCGTCTGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp CCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCAATTCCGGAGCTTaGGGCAGGGATCTCGTGGGT +
Preference number: 3 (lower is better)
Translates to: PMSVWNQTGELRKWSLATPNSGA*GRDLVG
Trigger: ACCCACGAGATCCCTGCCCAAAGCTCCGGAATTGGG...AGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTAGGAGTCTTTGGAGCTaGGCAATGCAGGGGCTTATT +
Preference number: 3 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGRSLWS*AMQGLI
Trigger: AATAAGCCCCTGCATTGCCAAGCTCCAAAGACTCCT...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp ACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTaGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAAT +
Preference number: 3 (lower is better)
Translates to: TSFQYRRPVDPG*LFLCPSGVWGN
Trigger: ATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp CTGACTGCCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTCTGGGGAAGGAGTCTTaGGAGCTTGGCAATGCAGGG +
Preference number: 3 (lower is better)
Translates to: LTAYVCLEPNRRTQEMVSLGKES*ELGNAG
Trigger: CCCTGCATTGCCAAGCTCCAAAGACTCCTTCCCCAG...AGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp CCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCAATGCAGGGGCTTATaGCAGGGGCTTCTCCAGACT +
Preference number: 3 (lower is better)
Translates to: PMSVWNQTGELRKWSLATQCRGL*QGLLQT
Trigger: AGTCTGGAGAAGCCCCTGCAATAAGCCCCTGCATTG...AGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACCCCTACACGCAATTTaGGGCCAAATGAATAAACAA +
Preference number: 3 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRPLHAI*GQMNKQ
Trigger: TTGTTTATTCATTTGGCCCAAAATTGCGTGTAGGGG...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp CTGACTGCCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTAGGAGTCTTTGGAGCTaGGCAATGCAGGGGCTTATT +
Preference number: 3 (lower is better)
Translates to: LTAYVCLEPNRRTQEMVSRSLWS*AMQGLI
Trigger: AATAAGCCCCTGCATTGCCAAGCTCCAAAGACTCCT...AGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CCA 72 bp ATGCCAAGCCCCCACCACAGGAAATCATTGGTAACATaGCATCTACAGCAAGGTCGGCAAATCACAAACATC +
Preference number: 3 (lower is better)
Translates to: MPSPHHRKSLVT*HLQQGRQITNI
Trigger: GATGTTTGTGATTTGCCGACCTTGCTGTAGATGCCATGTTACCAATGATTTCCTGTGGTGGGGGCTTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR-3UTR CAA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGAAGAAGCAGACTGAGTaGGGGAAACTCAGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGKKQTE*GKLRQL
Trigger: GAGCTGCCTGAGTTTCCCCAACTCAGTCTGCTTCTT...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGCGTCCAGGTCCAAGCTaGTGGTGGGGCCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPRPGPS*WWGPRW
Trigger: CCACCGTGGGCCCCACCATCAGCTTGGACCTGGACG...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCCTGGGGCGGTGGGGCTaGCGGTGGTGGGTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPLGRWG*RWWVKD
Trigger: ATCCTTCACCCACCACCGCCAGCCCCACCGCCCCAG...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGCTGGGGCGGTGGGGCTaGCGGTGGTGGGTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPLGRWG*RWWVKD
Trigger: ATCCTTCACCCACCACCGCCAGCCCCACCGCCCCAG...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCCTCATCCTGGGCAGGTaGGCTGACCAGGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPLILGR*ADQGPL
Trigger: GAGGGGCCCCTGGTCAGCCCACCTGCCCAGGATGAG...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR TCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGTAGTGAAGGGGCACTaGGGGCGACAAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPVVKGH*GRQGWA
Trigger: GGCCCAGCCTTGTCGCCCTCAGTGCCCCTTCACTAC...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGCGTCCAGGTCCAAGCTaGTGGTGGGGCCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLRPGPS*WWGPRW
Trigger: CCACCGTGGGCCCCACCATCAGCTTGGACCTGGACG...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCCGTCCAGGTCCAAGCTaGTGGTGGGGCCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPRPGPS*WWGPRW
Trigger: CCACCGTGGGCCCCACCATCAGCTTGGACCTGGACG...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCCGATGTCTGCTTTGGTaGGGCCCCGGGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALRCLLW*GPGAWR
Trigger: ACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCG...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCCCTGCCGGCAGGAGCTaGGGCTCGGTGCTCCTCTAC +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPPAGRS*GSVLLY
Trigger: GTAGAGGAGCACCGAGCCTCAGCTCCTGCCGGCAGG...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR GCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCGGCCCAGGGAGCTGCTaGATGGTGCACGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALGPGSC*MVHAWI
Trigger: GATCCAGGCGTGCACCATGCAGCAGCTCCCTGGGCC...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCCACGCCTGGATCAGCTaGGGAGGTGGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPHAWIS*GGGRQQ
Trigger: CTGCTGCCTCCCACCTCCGCAGCTGATCCAGGCGTG...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR CCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCTGGGTAGTAAGATGGTaGCGGCGGCGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALWVVRW*RRRWGW
Trigger: CCACCCCCACCGCCGCCGCCACCATCTTACTACCCA...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCGTCCAGGTCCAAGCTaGTGGTGGGGCCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLARPGPS*WWGPRW
Trigger: CCACCGTGGGCCCCACCATCAGCTTGGACCTGGACG...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGCGATGTCTGCTTTGGTaGGGCCCCGGGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLRCLLW*GPGAWR
Trigger: ACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCG...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCGATGTCTGCTTTGGTaGGGCCCCGGGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPRCLLW*GPGAWR
Trigger: ACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCG...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPTMNGL*WVAGCS
Trigger: GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGT...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALTMNGL*WVAGCS
Trigger: GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGT...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGGCCCAGGGAGCTGCTaGATGGTGCACGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPGPGSC*MVHAWI
Trigger: GATCCAGGCGTGCACCATGCAGCAGCTCCCTGGGCC...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGCATTCGGGGGCTCCTaGCGGCAGGAGCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTAFGGS*RQELRL
Trigger: GAGCCTCAGCTCCTGCCGGCAGGAGCCCCCGAATGC...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR CCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCCATGCTGGGAGCTGCTaGGCACTGCAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALHAGSC*ALQPGM
Trigger: CATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATG...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCTGCATGGTGCACGCCTaGATCAGCGGAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPCMVHA*ISGGGR
Trigger: CCTCCCACCTCCGCTGATCCAGGCGTGCACCATGCA...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037422.16
ENSMUST00000128257.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCTGGGGCGGTGGGGCTaGCGGTGGTGGGTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLLGRWG*RWWVKD
Trigger: ATCCTTCACCCACCACCGCCAGCCCCACCGCCCCAG...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGTGGGTAGTAAGATGGTaGCGGCGGCGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPWVVRW*RRRWGW
Trigger: CCACCCCCACCGCCGCCGCCACCATCTTACTACCCA...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCTGGTGGGGCCCACGGTaGTCGGTGACATTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPWWGPR*SVTLAA
Trigger: TGCTGCCAATGTCACCGACCACCGTGGGCCCCACCA...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCCATCCGCCCGGCAAATaGGACAGGTCCGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPHPPGK*DRSGWP
Trigger: AGGCCAACCGGACCTGTCCCATTTGCCGGGCGGATG...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCGTAGTGAAGGGGCACTaGGGGCGACAAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLAVVKGH*GRQGWA
Trigger: GGCCCAGCCTTGTCGCCCTCAGTGCCCCTTCACTAC...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGGGAGCTGCTGGGCACTaGAGCCAGGGATGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPGAAGH*SQGCVG
Trigger: GCCAACACATCCCTGGCTGCAGTGCCCAGCAGCTCC...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGGGAGCTGCTGCATGGTaGACGCCTGGATCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPGAAAW*TPGSAE
Trigger: CTCCGCTGATCCAGGCGTGCACCATGCAGCAGCTCC...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037422.16
ENSMUST00000128257.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCGGCCCAGGGAGCTGCTaGATGGTGCACGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLAGPGSC*MVHAWI
Trigger: GATCCAGGCGTGCACCATGCAGCAGCTCCCTGGGCC...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCGGCCCAGGGAGCTGCTaGATGGTGCACGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLGPGSC*MVHAWI
Trigger: GATCCAGGCGTGCACCATGCAGCAGCTCCCTGGGCC...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGCGTGGGTGCTGGGTCTaGAGGGACACAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPRGCWV*RDTNCP
Trigger: TGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACG...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCCGTGGGTGCTGGGTCTaGAGGGACACAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALRGCWV*RDTNCP
Trigger: TGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACG...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCCGTGGGTGCTGGGTCTaGAGGGACACAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPRGCWV*RDTNCP
Trigger: TGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACG...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCAGGGGCATACGTGGGTaGTGGGTCTGCAGGGACACA +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPRGIRG*WVCRDT
Trigger: TGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCT...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCAGGGGCATACGTGGGTaGTGGGTCTGCAGGGACACA +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALRGIRG*WVCRDT
Trigger: TGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCT...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGGTGGCAGCGGCTGTTaGAGGCGGTATCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPGGSGC*RRYLCV
Trigger: CACACAGAGATACCGCCTGCAACAGCCGCTGCCACC...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCACGCCTGGATCAGCTaGGGAGGTGGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLHAWIS*GGGRQQ
Trigger: CTGCTGCCTCCCACCTCCGCAGCTGATCCAGGCGTG...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR CCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCCATGCTGGGAGCTGCTaGGCACTGCAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPHAGSC*ALQPGM
Trigger: CATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATG...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGCATGCTGGGAGCTGCTaGGCACTGCAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLHAGSC*ALQPGM
Trigger: CATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATG...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCTGGGGCTGGCGGTGGTaGGTGAAGGATGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPWGWRW*VKDVVV
Trigger: GACCACTACATCCTTCACCCACCACCGCCAGCCCCA...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCGGTGGGGCTGGCGGTaGTGGGTGAAGGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPRWGWR*WVKDVV
Trigger: CACTACATCCTTCACCCACCACCGCCAGCCCCACCG...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCTGCAGGGGCATACGTaGGTGCTGGGTCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPLQGHT*VLGLQG
Trigger: TCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAG...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGCTGCAGGGGCATACGTaGGTGCTGGGTCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLLQGHT*VLGLQG
Trigger: TCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAG...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCCTGCAGGGGCATACGTaGGTGCTGGGTCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPLQGHT*VLGLQG
Trigger: TCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAG...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGTGGTGGGGCCCACGGTaGTCGGTGACATTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLWWGPR*SVTLAA
Trigger: TGCTGCCAATGTCACCGACCACCGTGGGCCCCACCA...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCTGGTGGGGCCCACGGTaGTCGGTGACATTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPWWGPR*SVTLAA
Trigger: TGCTGCCAATGTCACCGACCACCGTGGGCCCCACCA...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGGATCAGCTGCGGAGGTaGGAGGCAGCAGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPDQLRR*EAAEGV
Trigger: TACCCCCTCTGCTGCCTCCCACCTCCGCAGCTGATC...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR CCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCTGCATGGTGCACGCCTaGATCAGCTGCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPCMVHA*ISCGGG
Trigger: CCCACCTCCGCAGCTGATCCAGGCGTGCACCATGCA...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR TCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCGTGGAGATCAACCATaGACGGGCTCTGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPRGDQP*TGSAGW
Trigger: CCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACG...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCGGTAGTGCTGCCCACTaGACATCACGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALGSAAH*TSRSML
Trigger: CAGCATGCTCCGTGATGTTCAGTGGGCAGCACTACC...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGGTAGTGCTGCCCACTaGACATCACGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPGSAAH*TSRSML
Trigger: CAGCATGCTCCGTGATGTTCAGTGGGCAGCACTACC...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLTMNGL*WVAGCS
Trigger: GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGT...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCGTGGGTGCTGGGTCTaGAGGGACACAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPRGCWV*RDTNCP
Trigger: TGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACG...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCAGGGGCATACGTGGGTaGTGGGTCTGCAGGGACACA +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPRGIRG*WVCRDT
Trigger: TGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCT...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCAAGCTACCCAAGGGGTaGTGGTCTCCTCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALKLPKG*WSPRRS
Trigger: GGACCTTCGAGGAGACCAGCACCCCTTGGGTAGCTT...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGGGTGGCAGCGGCTGTTaGAGGCGGTATCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPGGSGC*RRYLCV
Trigger: CACACAGAGATACCGCCTGCAACAGCCGCTGCCACC...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGGGTGGCAGCGGCTGTTaGAGGCGGTATCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLGGSGC*RRYLCV
Trigger: CACACAGAGATACCGCCTGCAACAGCCGCTGCCACC...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCACGCCTGGATCAGCTaGGGAGGTGGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGHAWIS*GGGRQQ
Trigger: CTGCTGCCTCCCACCTCCGCAGCTGATCCAGGCGTG...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR CCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCCATCACGGAGCATGCTaGGAGCTGCTGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPHHGAC*ELLGTA
Trigger: TGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATG...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCTGGATCAGCGGAGGTaGGAGGCAGCAGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLLDQRR*EAAEGV
Trigger: TACCCCCTCTGCTGCCTCCCACCTCCGCTGATCCAG...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037422.16
ENSMUST00000128257.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACACTGGATCAGCGGAGGTaGGAGGCAGCAGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTLDQRR*EAAEGV
Trigger: TACCCCCTCTGCTGCCTCCCACCTCCGCTGATCCAG...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037422.16
ENSMUST00000128257.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCTGCATGGTGCACGCCTaGATCAGCGGAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLACMVHA*ISGGGR
Trigger: CCTCCCACCTCCGCTGATCCAGGCGTGCACCATGCA...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037422.16
ENSMUST00000128257.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGTGGGGCTGGCGGTGGTaGGTGAAGGATGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPWGWRW*VKDVVV
Trigger: GACCACTACATCCTTCACCCACCACCGCCAGCCCCA...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACACGGTGGGGCTGGCGGTaGTGGGTGAAGGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTRWGWR*WVKDVV
Trigger: CACTACATCCTTCACCCACCACCGCCAGCCCCACCG...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGGGCATACGTGGGTGCTaGGTCTGCAGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPGIRGC*VCRDTN
Trigger: GTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCC...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCGGCATACGTGGGTGCTaGGTCTGCAGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALGIRGC*VCRDTN
Trigger: GTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCC...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACACTGCAGGGGCATACGTaGGTGCTGGGTCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTLQGHT*VLGLQG
Trigger: TCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAG...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCATCCGCCCGGCAAATaGGACAGGTCCGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLHPPGK*DRSGWP
Trigger: AGGCCAACCGGACCTGTCCCATTTGCCGGGCGGATG...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGATCAGCTGCGGAGGTaGGAGGCAGCAGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTDQLRR*EAAEGV
Trigger: TACCCCCTCTGCTGCCTCCCACCTCCGCAGCTGATC...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR CCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCTGCATGGTGCACGCCTaGATCAGCTGCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLACMVHA*ISCGGG
Trigger: CCCACCTCCGCAGCTGATCCAGGCGTGCACCATGCA...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR TCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCGTGGAGATCAACCATaGACGGGCTCTGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLRGDQP*TGSAGW
Trigger: CCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACG...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCGTGGAGATCAACCATaGACGGGCTCTGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLARGDQP*TGSAGW
Trigger: CCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACG...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGGGTAGTGCTGCCCACTaGACATCACGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPGSAAH*TSRSML
Trigger: CAGCATGCTCCGTGATGTTCAGTGGGCAGCACTACC...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGCGATGTCTGCTTTGGTaGGGCCCCGGGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRRCLLW*GPGAWR
Trigger: ACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCG...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCGTAGAGACTCGCCAGTaGCCCACAGGGGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLAVETRQ*PTGAEG
Trigger: ACCTTCTGCCCCTGTGGGTCACTGGCGAGTCTCTAC...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR GCA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGGGGACAGGTCCCTGGTaGACTTGTTCGTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPGTGPW*TCSWRS
Trigger: TGATCTCCACGAACAAGTGCACCAGGGACCTGTCCC...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGGGCCCAGGGAGCTGCTaGATGGTGCACGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPGPGSC*MVHAWI
Trigger: GATCCAGGCGTGCACCATGCAGCAGCTCCCTGGGCC...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGAAGCTACCCAAGGGGTaGTGGTCTCCTCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPKLPKG*WSPRRS
Trigger: GGACCTTCGAGGAGACCAGCACCCCTTGGGTAGCTT...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGAAGGACAGCTCCTGGTaGAGTGGATCATGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPKDSSW*SGSWGR
Trigger: CCTACCCCATGATCCACTGCACCAGGAGCTGTCCTT...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCGGTGGCAGCGGCTGTTaGAGGCGGTATCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLAGGSGC*RRYLCV
Trigger: CACACAGAGATACCGCCTGCAACAGCCGCTGCCACC...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCAGGACTCGGAGCAGTTaGCGCACCTCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPRTRSS*RTSKSL
Trigger: CAGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCT...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCAGAGGGACAGGTCCCTaGTGCACTTGTTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPRGTGP*CTCSWR
Trigger: TCTCCACGAACAAGTGCACCAGGGACCTGTCCCTCT...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGAGAGGGACAGGTCCCTaGTGCACTTGTTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPRGTGP*CTCSWR
Trigger: TCTCCACGAACAAGTGCACCAGGGACCTGTCCCTCT...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCGGCAAAGGGAAGCCTTaGGTTGTCACTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALGKGKP*VVTVVT
Trigger: GGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCC...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCATCACGGAGCATGCTaGGAGCTGCTGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLHHGAC*ELLGTA
Trigger: TGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATG...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCGGTGGGGCTGGCGGTaGTGGGTGAAGGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGRWGWR*WVKDVV
Trigger: CACTACATCCTTCACCCACCACCGCCAGCCCCACCG...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGTGGGTAGTAAGATGGTaGCGGCGGCGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLWVVRW*RRRWGW
Trigger: CCACCCCCACCGCCGCCGCCACCATCTTACTACCCA...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGATGAACGGGCTCTGCTaGGTGGCTGGGTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLMNGLC*VAGCSI
Trigger: AATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCAT...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR TCA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCGTGGAGATCAACCATaGACGGGCTCTGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGRGDQP*TGSAGW
Trigger: CCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACG...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCGGTAGTGCTGCCCACTaGACATCACGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLGSAAH*TSRSML
Trigger: CAGCATGCTCCGTGATGTTCAGTGGGCAGCACTACC...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCCGTCCAGGTCCAAGCTaGTGGTGGGGCCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: SLEPWPICSWSLAGILSSRPGPS*WWGPRW
Trigger: CCACCGTGGGCCCCACCATCAGCTTGGACCTGGACG...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGGGGACAGGTCCCTGGTaGACTTGTTCGTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLGTGPW*TCSWRS
Trigger: TGATCTCCACGAACAAGTGCACCAGGGACCTGTCCC...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGGGAGCTGCTGCATGGTaGACGCCTGGATCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRGAAAW*TPGSAE
Trigger: CTCCGCTGATCCAGGCGTGCACCATGCAGCAGCTCC...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037422.16
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCAAGCTACCCAAGGGGTaGTGGTCTCCTCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLKLPKG*WSPRRS
Trigger: GGACCTTCGAGGAGACCAGCACCCCTTGGGTAGCTT...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCAAGCTACCCAAGGGGTaGTGGTCTCCTCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLAKLPKG*WSPRRS
Trigger: GGACCTTCGAGGAGACCAGCACCCCTTGGGTAGCTT...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGAAGGACAGCTCCTGGTaGAGTGGATCATGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLKDSSW*SGSWGR
Trigger: CCTACCCCATGATCCACTGCACCAGGAGCTGTCCTT...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGGGCGGTATCTCTGTGTaGTCAGTCTTCGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPGGISV*SVFVAS
Trigger: TGATGCCACGAAGACTGAGCACACAGAGATACCGCC...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCGGCGGTATCTCTGTGTaGTCAGTCTTCGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALGGISV*SVFVAS
Trigger: TGATGCCACGAAGACTGAGCACACAGAGATACCGCC...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAAGGACTCGGAGCAGTTaGCGCACCTCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTRTRSS*RTSKSL
Trigger: CAGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCT...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGGGAGCTGCTGCATGGTaGACGCCTGGATCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRGAAAW*TPGSAA
Trigger: CGCAGCTGATCCAGGCGTGCACCATGCAGCAGCTCC...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR CCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGGCAAAGGGAAGCCTTaGGTTGTCACTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPGKGKP*VVTVVT
Trigger: GGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCC...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCCAGCCAGGGATGTGTTaGCTTGTAGGCAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GTSSGVAGGNADRPGPALQPGMC*LVGKGK
Trigger: CTTCCCTTTGCCTACAAGCCAACACATCCCTGGCTG...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGCATGCTGGGAGCTGCTaGGCACTGCAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPHAGSC*ALQPGM
Trigger: CATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATG...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGCATGCTGGGAGCTGCTaGGCACTGCAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRHAGSC*ALQPGM
Trigger: CATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATG...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGTGCATGGTGCACGCCTaGATCAGCGGAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPCMVHA*ISGGGR
Trigger: CCTCCCACCTCCGCTGATCCAGGCGTGCACCATGCA...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037422.16
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGGCATACGTGGGTGCTaGGTCTGCAGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTGIRGC*VCRDTN
Trigger: GTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCC...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGCTGCAGGGGCATACGTaGGTGCTGGGTCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRLQGHT*VLGLQG
Trigger: TCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAG...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCAAAGGACAGCTCCTaGTGCAGTGGATCATGGGGT +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPPKDSS*CSGSWG
Trigger: ACCCCATGATCCACTGCACCAGGAGCTGTCCTTTGG...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGCATCCGCCCGGCAAATaGGACAGGTCCGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRHPPGK*DRSGWP
Trigger: AGGCCAACCGGACCTGTCCCATTTGCCGGGCGGATG...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCCGATGTCTGCTTTGGTaGGGCCCCGGGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: SLEPWPICSWSLAGILSSRCLLW*GPGAWR
Trigger: ACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCG...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGCACCTCGAAGTCACTaGAGCAGACCACACACAGAG +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTAPRSH*SRPHTE
Trigger: CTCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGTGC...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCGGGACAGGTCCCTGGTaGACTTGTTCGTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLGTGPW*TCSWRS
Trigger: TGATCTCCACGAACAAGTGCACCAGGGACCTGTCCC...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGCGTGGGTGCTGGGTCTaGAGGGACACAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPRGCWV*RDTNCP
Trigger: TGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACG...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCAAGGACAGCTCCTGGTaGAGTGGATCATGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLKDSSW*SGSWGR
Trigger: CCTACCCCATGATCCACTGCACCAGGAGCTGTCCTT...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAAAGGACAGCTCCTGGTaGAGTGGATCATGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTKDSSW*SGSWGR
Trigger: CCTACCCCATGATCCACTGCACCAGGAGCTGTCCTT...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGTGGTGCACTTGTTCGTaGAGATCAACCATGAACGGG +
Preference number: 4 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPWCTCS*RSTMNG
Trigger: CCCGTTCATGGTTGATCTCCACGAACAAGTGCACCA...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCAGAGGGACAGGTCCCTaGTGCACTTGTTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLARGTGP*CTCSWR
Trigger: TCTCCACGAACAAGTGCACCAGGGACCTGTCCCTCT...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCGGCAAAGGGAAGCCTTaGGTTGTCACTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLAGKGKP*VVTVVT
Trigger: GGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCC...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGGCAAAGGGAAGCCTTaGGTTGTCACTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTGKGKP*VVTVVT
Trigger: GGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCC...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGCAGCCAGGGATGTGTTaGCTTGTAGGCAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLQPGMC*LVGKGK
Trigger: CTTCCCTTTGCCTACAAGCCAACACATCCCTGGCTG...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCAGCCAGGGATGTGTTaGCTTGTAGGCAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPQPGMC*LVGKGK
Trigger: CTTCCCTTTGCCTACAAGCCAACACATCCCTGGCTG...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGTGGGGCTGGCGGTGGTaGGTGAAGGATGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLWGWRW*VKDVVV
Trigger: GACCACTACATCCTTCACCCACCACCGCCAGCCCCA...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGACTGGGGCGGTGGGGCTaGCGGTGGTGGGTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GPERRVRNTASSRPWRAGLGRWG*RWWVKD
Trigger: ATCCTTCACCCACCACCGCCAGCCCCACCGCCCCAG...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCAAAGGACAGCTCCTaGTGCAGTGGATCATGGGGT +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLAPKDSS*CSGSWG
Trigger: ACCCCATGATCCACTGCACCAGGAGCTGTCCTTTGG...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCACAGGGGCAGAAGGTaGCCACTTAGTCACTGCCAA +
Preference number: 4 (lower is better)
Translates to: LTLAPALEWQVGTLTGLAHRGRR*PLSHCQ
Trigger: TTGGCAGTGACTAAGTGGCCACCTTCTGCCCCTGTG...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR TCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAGTAGTGAAGGGGCACTaGGGGCGACAAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GPERRVRNTASSRPWRAGVVKGH*GRQGWA
Trigger: GGCCCAGCCTTGTCGCCCTCAGTGCCCCTTCACTAC...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCAGAGTCTGCTCAGACTaGTGGCTGTCAGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPRVCSD*WLSGLK
Trigger: CTTTAACCCTGACAGCCATCAGTCTGAGCAGACTCT...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCGGGACAGGTCCCTGGTaGACTTGTTCGTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGGTGPW*TCSWRS
Trigger: TGATCTCCACGAACAAGTGCACCAGGGACCTGTCCC...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCGGAGCTGCTGGGCACTaGAGCCAGGGATGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: SLEPWPICSWSLAGILSSGAAGH*SQGCVG
Trigger: GCCAACACATCCCTGGCTGCAGTGCCCAGCAGCTCC...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGAGGACTCGGAGCAGTTaGCGCACCTCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLRTRSS*RTSKSL
Trigger: CAGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCT...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGCTGGGGCGGTGGGGCTaGCGGTGGTGGGTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRLGRWG*RWWVKD
Trigger: ATCCTTCACCCACCACCGCCAGCCCCACCGCCCCAG...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCCTTCGTGGCATCATGTaGGAATATGGCACACCAAAG +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPLRGIM*EYGTPK
Trigger: CTTTGGTGTGCCATATTCCCACATGATGCCACGAAG...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCTGTGCTCAGTCTTCGTaGCATCATGTGGGAATATGG +
Preference number: 4 (lower is better)
Translates to: GVAGGNADRPGPALTVLPCAQSS*HHVGIW
Trigger: CCATATTCCCACATGATGCCACGAAGACTGAGCACA...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGTGTGCTCAGTCTTCGTaGCATCATGTGGGAATATGG +
Preference number: 4 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPCAQSS*HHVGIW
Trigger: CCATATTCCCACATGATGCCACGAAGACTGAGCACA...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGATGGGTAGTAAGATGGTaGCGGCGGCGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPERRVRNTASSRPWRAGWVVRW*RRRWGW
Trigger: CCACCCCCACCGCCGCCGCCACCATCTTACTACCCA...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGGTAGTGAAGGGGCACTaGGGGCGACAAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRVVKGH*GRQGWA
Trigger: GGCCCAGCCTTGTCGCCCTCAGTGCCCCTTCACTAC...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAGTAGTGAAGGGGCACTaGGGGCGACAAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRVVKGH*GRQGWA
Trigger: GGCCCAGCCTTGTCGCCCTCAGTGCCCCTTCACTAC...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAAGAGTCTGCTCAGACTaGTGGCTGTCAGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTRVCSD*WLSGLK
Trigger: CTTTAACCCTGACAGCCATCAGTCTGAGCAGACTCT...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGGCACCTCGAAGTCACTaGAGCAGACCACACACAGAG +
Preference number: 4 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRAPRSH*SRPHTE
Trigger: CTCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGTGC...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGCTCTACAGAGAGGTTTaGTGGTCTGGGCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPLYREV*WSGQQL
Trigger: CAGCTGCTGCCCAGACCATCAAACCTCTCTGTAGAG...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR GCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGGGGACAGGTCCCTGGTaGACTTGTTCGTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLGTGPW*TCSWRS
Trigger: TGATCTCCACGAACAAGTGCACCAGGGACCTGTCCC...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAGGAGCTGCTGGGCACTaGAGCCAGGGATGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: GPERRVRNTASSRPWRAGGAAGH*SQGCVG
Trigger: GCCAACACATCCCTGGCTGCAGTGCCCAGCAGCTCC...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCTGGTGCACTTGTTCGTaGAGATCAACCATGAACGGG +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLWCTCS*RSTMNG
Trigger: CCCGTTCATGGTTGATCTCCACGAACAAGTGCACCA...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGACTGGATCAGCGGAGGTaGGAGGCAGCAGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: GPERRVRNTASSRPWRAGLDQRR*EAAEGV
Trigger: TACCCCCTCTGCTGCCTCCCACCTCCGCTGATCCAG...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037422.16
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGACGGTGGGGCTGGCGGTaGTGGGTGAAGGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: GPERRVRNTASSRPWRAGRWGWR*WVKDVV
Trigger: CACTACATCCTTCACCCACCACCGCCAGCCCCACCG...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGCCAAAGGACAGCTCCTaGTGCAGTGGATCATGGGGT +
Preference number: 4 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRPKDSS*CSGSWG
Trigger: ACCCCATGATCCACTGCACCAGGAGCTGTCCTTTGG...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGCTTCGTGGCATCATGTaGGAATATGGCACACCAAAG +
Preference number: 4 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLLRGIM*EYGTPK
Trigger: CTTTGGTGTGCCATATTCCCACATGATGCCACGAAG...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCCTTCGTGGCATCATGTaGGAATATGGCACACCAAAG +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPLRGIM*EYGTPK
Trigger: CTTTGGTGTGCCATATTCCCACATGATGCCACGAAG...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCTGTGCTCAGTCTTCGTaGCATCATGTGGGAATATGG +
Preference number: 4 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPCAQSS*HHVGIW
Trigger: CCATATTCCCACATGATGCCACGAAGACTGAGCACA...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCATGGGTAGTAAGATGGTaGCGGCGGCGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPWVVRW*RRRWGW
Trigger: CCACCCCCACCGCCGCCGCCACCATCTTACTACCCA...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGTGGGTAGTAAGATGGTaGCGGCGGCGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRWVVRW*RRRWGW
Trigger: CCACCCCCACCGCCGCCGCCACCATCTTACTACCCA...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCAGAGTCTGCTCAGACTaGTGGCTGTCAGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGRVCSD*WLSGLK
Trigger: CTTTAACCCTGACAGCCATCAGTCTGAGCAGACTCT...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRTMNGL*WVAGCS
Trigger: GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGT...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGGGAGCTGCTGGGCACTaGAGCCAGGGATGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRGAAGH*SQGCVG
Trigger: GCCAACACATCCCTGGCTGCAGTGCCCAGCAGCTCC...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCAGGAGCTGCTGCATGGTaGACGCCTGGATCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPGAAAW*TPGSAE
Trigger: CTCCGCTGATCCAGGCGTGCACCATGCAGCAGCTCC...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037422.16
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCAGGACTCGGAGCAGTTaGCGCACCTCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SLEPWPICSWSLAGILSSRTRSS*RTSKSL
Trigger: CAGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCT...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAGGTCTGGGCAGCAGCTaGTGGGAGGGTAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRGLGSS*WEGKRS
Trigger: TGAGCGCTTACCCTCCCAGCAGCTGCTGCCCAGACC...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR GCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTTGCTGGGTGGCTGGGTaGAGCATTCGGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGCWVAG*SIRGLL
Trigger: CAGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCA...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR GCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCAGGAGCTGCTGCATGGTaGACGCCTGGATCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPGAAAW*TPGSAA
Trigger: CGCAGCTGATCCAGGCGTGCACCATGCAGCAGCTCC...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR GCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAGGAGCTGCTGCATGGTaGACGCCTGGATCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRGAAAW*TPGSAA
Trigger: CGCAGCTGATCCAGGCGTGCACCATGCAGCAGCTCC...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR CCA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCTGGTGCACTTGTTCGTaGAGATCAACCATGAACGGG +
Preference number: 4 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGWCTCS*RSTMNG
Trigger: CCCGTTCATGGTTGATCTCCACGAACAAGTGCACCA...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCACTGCAGGGGCATACGTaGGTGCTGGGTCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPLQGHT*VLGLQG
Trigger: TCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAG...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACACATCATGTGGGAATATaGCACACCAAAGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: TSSGVAGGNADRPGPALTHHVGI*HTKGQL
Trigger: GAGCTGTCCTTTGGTGTGCCATATTCCCACATGATG...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCTTCGTGGCATCATGTaGGAATATGGCACACCAAAG +
Preference number: 4 (lower is better)
Translates to: SGVAGGNADRPGPALTVLLRGIM*EYGTPK
Trigger: CTTTGGTGTGCCATATTCCCACATGATGCCACGAAG...GAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCATGGTGGGGCCCACGGTaGTCGGTGACATTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPWWGPR*SVTLAA
Trigger: TGCTGCCAATGTCACCGACCACCGTGGGCCCCACCA...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGTGGTGGGGCCCACGGTaGTCGGTGACATTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRWWGPR*SVTLAA
Trigger: TGCTGCCAATGTCACCGACCACCGTGGGCCCCACCA...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACATCCGCCCGGCAAATaGGACAGGTCCGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRHPPGK*DRSGWP
Trigger: AGGCCAACCGGACCTGTCCCATTTGCCGGGCGGATG...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCTCCCCAGAGCTGGCCTaGACTGCTGCTAAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLEPWPICSWSLAGILSSSPELA*TAAKPC
Trigger: ACAAGGCTTAGCAGCAGTCCAGGCCAGCTCTGGGGA...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR CCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGGGTAAGCGCTCATCCTaGGCAGGTGGGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRGKRSS*AGGLTR
Trigger: CCTGGTCAGCCCACCTGCCCAGGATGAGCGCTTACC...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR CCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCACTGGGCAGCAGCTGCTaGGAGGGTAAGCGCTCATCC +
Preference number: 4 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPLGSSC*EGKRSS
Trigger: GGATGAGCGCTTACCCTCCCAGCAGCTGCTGCCCAG...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGATGCATGGTGCACGCCTaGATCAGCTGCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRCMVHA*ISCGGG
Trigger: CCCACCTCCGCAGCTGATCCAGGCGTGCACCATGCA...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR GCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTGGAGCTGCTGGGCACTaGAGCCAGGGATGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGGAAGH*SQGCVG
Trigger: GCCAACACATCCCTGGCTGCAGTGCCCAGCAGCTCC...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGAGGGGCATACGTGGGTaGTGGGTCTGCAGGGACACA +
Preference number: 4 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRRGIRG*WVCRDT
Trigger: TGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCT...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAAGGACTCGGAGCAGTTaGCGCACCTCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: GPERRVRNTASSRPWRAGRTRSS*RTSKSL
Trigger: CAGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCT...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTCATGCTGGGAGCTGCTaGGCACTGCAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGHAGSC*ALQPGM
Trigger: CATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATG...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGATGGGGCTGGCGGTGGTaGGTGAAGGATGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRWGWRW*VKDVVV
Trigger: GACCACTACATCCTTCACCCACCACCGCCAGCCCCA...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCATGGGGCTGGCGGTGGTaGGTGAAGGATGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPWGWRW*VKDVVV
Trigger: GACCACTACATCCTTCACCCACCACCGCCAGCCCCA...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCATCATGTGGGAATATaGCACACCAAAGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGHHVGI*HTKGQL
Trigger: GAGCTGTCCTTTGGTGTGCCATATTCCCACATGATG...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCTGTGCTCAGTCTTCGTaGCATCATGTGGGAATATGG +
Preference number: 4 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGCAQSS*HHVGIW
Trigger: CCATATTCCCACATGATGCCACGAAGACTGAGCACA...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTCATCCGCCCGGCAAATaGGACAGGTCCGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGHPPGK*DRSGWP
Trigger: AGGCCAACCGGACCTGTCCCATTTGCCGGGCGGATG...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAGGGTTGTCACTGTGGTaGCCGTGTAGGACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRGLSLW*PCRTEG
Trigger: TCCCTCTGTCCTACACGGTCACCACAGTGACAACCC...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTCGTGGGTGCTGGGTCTaGAGGGACACAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGRGCWV*RDTNCP
Trigger: TGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACG...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAAAGGACAGCTCCTGGTaGAGTGGATCATGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GPERRVRNTASSRPWRAGKDSSW*SGSWGR
Trigger: CCTACCCCATGATCCACTGCACCAGGAGCTGTCCTT...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCGGCGGTATCTCTGTGTaGTCAGTCTTCGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: SLEPWPICSWSLAGILSSGGISV*SVFVAS
Trigger: TGATGCCACGAAGACTGAGCACACAGAGATACCGCC...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAAGAGGGACAGGTCCCTaGTGCACTTGTTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GPERRVRNTASSRPWRAGRGTGP*CTCSWR
Trigger: TCTCCACGAACAAGTGCACCAGGGACCTGTCCCTCT...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCAGGCATACGTGGGTGCTaGGTCTGCAGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPGIRGC*VCRDTN
Trigger: GTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCC...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GTCTCTGGCTACTCCCTGCCCACACACCTGGCAACCCCACTAGGGCAGGGAAGGCTTCGTGGCATCATGTaGGAATATGGCACACCAAAG +
Preference number: 4 (lower is better)
Translates to: VSGYSLPTHLATPLGQGRLRGIM*EYGTPK
Trigger: CTTTGGTGTGCCATATTCCCACATGATGCCACGAAG...CCTTCCCTGCCCTAGTGGGGTTGCCAGGTGTGTGGGCAGGGAGTAGCCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGGCCCAGCAGTGCTGGGGGAAGGTGCCCACTGTCATGCCTAGGCCAGAAGTTGTGTGCTCAGTCTTCGTaGCATCATGTGGGAATATGG +
Preference number: 4 (lower is better)
Translates to: GPSSAGGRCPLSCLGQKLCAQSS*HHVGIW
Trigger: CCATATTCCCACATGATGCCACGAAGACTGAGCACA...CAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCCAGCACTGCTGGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CAA 72 bp GAAGGAGTCTTTGGAGCTTGGCAATGCAGGGGCTTATaGCAGGGGCTTCTCCAGACTGACCCTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: EGVFGAWQCRGL*QGLLQTDPGTS
Trigger: GCTGGTGCCAGGGTCAGTCTGGAGAAGCCCCTGCAATAAGCCCCTGCATTGCCAAGCTCCAAAGACTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CAA 72 bp CGGACCCTACTCTGCCCCCTGGGCATTTGGTCCCGGTaGGTCCCTATGCCCCCACTCCTATTAAACCAAAGA +
Preference number: 4 (lower is better)
Translates to: RTLLCPLGIWSR*VPMPPLLLNQR
Trigger: TCTTTGGTTTAATAGGAGTGGGGGCATAGGGACCAACCGGGACCAAATGCCCAGGGGGCAGAGTAGGGTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTGGTAGTGCTGCCCACTaGACATCACGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGGSAAH*TSRSML
Trigger: CAGCATGCTCCGTGATGTTCAGTGGGCAGCACTACC...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCAGCACCTCGAAGTCACTaGAGCAGACCACACACAGAG +
Preference number: 4 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPAPRSH*SRPHTE
Trigger: CTCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGTGC...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAGCACCTCGAAGTCACTaGAGCAGACCACACACAGAG +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRAPRSH*SRPHTE
Trigger: CTCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGTGC...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTAAGCTACCCAAGGGGTaGTGGTCTCCTCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGKLPKG*WSPRRS
Trigger: GGACCTTCGAGGAGACCAGCACCCCTTGGGTAGCTT...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTGGCATACGTGGGTGCTaGGTCTGCAGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGGIRGC*VCRDTN
Trigger: GTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCC...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTACGGGCTCTGCTGGGTaGCTGGGTGCAGCATTCGGG +
Preference number: 4 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPTGSAG*LGAAFG
Trigger: CCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGT...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS-3UTR TCA 90 bp CCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCGATGTCTGCTTTGGTaGGGCCCCGGGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: PMSVWNQTGELRKWSLATRCLLW*GPGAWR
Trigger: ACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCG...AGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTGCACCTCGAAGTCACTaGAGCAGACCACACACAGAG +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGAPRSH*SRPHTE
Trigger: CTCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGTGC...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPTMNGL*WVAGCS
Trigger: GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGT...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAGGCGGTATCTCTGTGTaGTCAGTCTTCGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRGGISV*SVFVAS
Trigger: TGATGCCACGAAGACTGAGCACACAGAGATACCGCC...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTGGCAAAGGGAAGCCTTaGGTTGTCACTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGGKGKP*VVTVVT
Trigger: GGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCC...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACAGCCAGGGATGTGTTaGCTTGTAGGCAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRQPGMC*LVGKGK
Trigger: CTTCCCTTTGCCTACAAGCCAACACATCCCTGGCTG...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTCGGTGGGGCTGGCGGTaGTGGGTGAAGGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPRWGWR*WVKDVV
Trigger: CACTACATCCTTCACCCACCACCGCCAGCCCCACCG...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCCATCATGTGGGAATATaGCACACCAAAGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: SLEPWPICSWSLAGILSSHHVGI*HTKGQL
Trigger: GAGCTGTCCTTTGGTGTGCCATATTCCCACATGATG...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
3UTR CAA 72 bp AGAACACAATGTATCCAGCTTGGAGCCCTGGCCCATTaGCTCATGGAGCCTGGCTGGGATACTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RTQCIQLGALAH*LMEPGWDTLQP
Trigger: AGGCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCTGGATACATTGTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCAAGAGTCTGCTCAGACTaGTGGCTGTCAGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPRVCSD*WLSGLK
Trigger: CTTTAACCCTGACAGCCATCAGTCTGAGCAGACTCT...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTGGAGCTGCTGGGCACTaGAGCCAGGGATGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: PMSVWNQTGELRKWSLATGAAGH*SQGCVG
Trigger: GCCAACACATCCCTGGCTGCAGTGCCCAGCAGCTCC...AGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTAGGGGCATACGTGGGTaGTGGGTCTGCAGGGACACA +
Preference number: 4 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPRGIRG*WVCRDT
Trigger: TGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCT...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGATGGTGCACTTGTTCGTaGAGATCAACCATGAACGGG +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRWCTCS*RSTMNG
Trigger: CCCGTTCATGGTTGATCTCCACGAACAAGTGCACCA...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTCAGCCAGGGATGTGTTaGCTTGTAGGCAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGQPGMC*LVGKGK
Trigger: CTTCCCTTTGCCTACAAGCCAACACATCCCTGGCTG...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTCATCACGGAGCATGCTaGGAGCTGCTGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPHHGAC*ELLGTA
Trigger: TGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATG...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGACATCATGTGGGAATATaGCACACCAAAGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: GPERRVRNTASSRPWRAGHHVGI*HTKGQL
Trigger: GAGCTGTCCTTTGGTGTGCCATATTCCCACATGATG...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTGACTGCCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTCATCCGCCCGGCAAATaGGACAGGTCCGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LTAYVCLEPNRRTQEMVSHPPGK*DRSGWP
Trigger: AGGCCAACCGGACCTGTCCCATTTGCCGGGCGGATG...AGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTGACTGCCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGATCAGCTGCGGAGGTaGGAGGCAGCAGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: LTAYVCLEPNRRTQEMVSDQLRR*EAAEGV
Trigger: TACCCCCTCTGCTGCCTCCCACCTCCGCAGCTGATC...AGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
CDS-3UTR TCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTAGAGTCTGCTCAGACTaGTGGCTGTCAGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGRVCSD*WLSGLK
Trigger: CTTTAACCCTGACAGCCATCAGTCTGAGCAGACTCT...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CTGACTGCCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTAGGGGCATACGTGGGTaGTGGGTCTGCAGGGACACA +
Preference number: 4 (lower is better)
Translates to: LTAYVCLEPNRRTQEMVSRGIRG*WVCRDT
Trigger: TGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCT...AGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTGGTGGCAGCGGCTGTTaGAGGCGGTATCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PMSVWNQTGELRKWSLATGGSGC*RRYLCV
Trigger: CACACAGAGATACCGCCTGCAACAGCCGCTGCCACC...AGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTAGGGCAGGGAAGGACACGTCATTTCAGTACAGGAGACCAGTTGACCCAGGGTTGGTGCACTTGTTCGTaGAGATCAACCATGAACGGG +
Preference number: 4 (lower is better)
Translates to: LGQGRTRHFSTGDQLTQGWCTCS*RSTMNG
Trigger: CCCGTTCATGGTTGATCTCCACGAACAAGTGCACCA...ACCCTGGGTCAACTGGTCTCCTGTACTGAAATGACGTGTCCTTCCCTGCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CTGACTGCCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTCATCACGGAGCATGCTaGGAGCTGCTGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: LTAYVCLEPNRRTQEMVSHHGAC*ELLGTA
Trigger: TGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATG...AGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCATCACGGAGCATGCTaGGAGCTGCTGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: PMSVWNQTGELRKWSLATHHGAC*ELLGTA
Trigger: TGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATG...AGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGCATCATGTGGGAATATaGCACACCAAAGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRHHVGI*HTKGQL
Trigger: GAGCTGTCCTTTGGTGTGCCATATTCCCACATGATG...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACATCATGTGGGAATATaGCACACCAAAGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRHHVGI*HTKGQL
Trigger: GAGCTGTCCTTTGGTGTGCCATATTCCCACATGATG...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGTGTGCTCAGTCTTCGTaGCATCATGTGGGAATATGG +
Preference number: 4 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRCAQSS*HHVGIW
Trigger: CCATATTCCCACATGATGCCACGAAGACTGAGCACA...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp CCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTGGTAGTGCTGCCCACTaGACATCACGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: PMSVWNQTGELRKWSLATGSAAH*TSRSML
Trigger: CAGCATGCTCCGTGATGTTCAGTGGGCAGCACTACC...AGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp CCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTAGGACTCGGAGCAGTTaGCGCACCTCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: PMSVWNQTGELRKWSLATRTRSS*RTSKSL
Trigger: CAGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCT...AGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTCCAAAGGACAGCTCCTaGTGCAGTGGATCATGGGGT +
Preference number: 4 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPPKDSS*CSGSWG
Trigger: ACCCCATGATCCACTGCACCAGGAGCTGTCCTTTGG...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp CTGACTGCCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGCACCTCGAAGTCACTaGAGCAGACCACACACAGAG +
Preference number: 4 (lower is better)
Translates to: LTAYVCLEPNRRTQEMVSAPRSH*SRPHTE
Trigger: CTCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGTGC...AGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR GCA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTGGCGGTATCTCTGTGTaGTCAGTCTTCGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPGGISV*SVFVAS
Trigger: TGATGCCACGAAGACTGAGCACACAGAGATACCGCC...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp CCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTGGCAAAGGGAAGCCTTaGGTTGTCACTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: PMSVWNQTGELRKWSLATGKGKP*VVTVVT
Trigger: GGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCC...AGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR TCA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTAGAGTCTGCTCAGACTaGTGGCTGTCAGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPRVCSD*WLSGLK
Trigger: CTTTAACCCTGACAGCCATCAGTCTGAGCAGACTCT...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGTGGGGCTGGCGGTGGTaGGTGAAGGATGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGWGWRW*VKDVVV
Trigger: GACCACTACATCCTTCACCCACCACCGCCAGCCCCA...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGAGAGGGACAGGTCCCTaGTGCACTTGTTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGRGTGP*CTCSWR
Trigger: TCTCCACGAACAAGTGCACCAGGGACCTGTCCCTCT...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CCA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGCCAAAGGACAGCTCCTaGTGCAGTGGATCATGGGGT +
Preference number: 4 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGPKDSS*CSGSWG
Trigger: ACCCCATGATCCACTGCACCAGGAGCTGTCCTTTGG...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCGTGAGGCCCCGGGGCTaGGCGTCTCCCAGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: GTSSGVAGGNADRPGPALVRPRG*ASPSRS
Trigger: TGAGCGGCTGGGAGACGCCAAGCCCCGGGGCCTCAC...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGTGAGGCCCCGGGGCTaGGCGTCTCCCAGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPVRPRG*ASPSRS
Trigger: TGAGCGGCTGGGAGACGCCAAGCCCCGGGGCCTCAC...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCGTGAGGCCCCGGGGCTaGGCGTCTCCCAGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGVRPRG*ASPSRS
Trigger: TGAGCGGCTGGGAGACGCCAAGCCCCGGGGCCTCAC...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCGAGGACTCGGAGCAGTaGCCGCACCTCGAAGTCACT +
Preference number: 5 (lower is better)
Translates to: GTSSGVAGGNADRPGPALEDSEQ*PHLEVT
Trigger: AGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCTC...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGAGGACTCGGAGCAGTaGCCGCACCTCGAAGTCACT +
Preference number: 5 (lower is better)
Translates to: GVAGGNADRPGPALTVLPEDSEQ*PHLEVT
Trigger: AGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCTC...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CCA 90 bp TTTGATGGTCTGGGCAGCAGCTGCTGGGAGGGTAAGCGCTCATCCTaGGCAGGTGGGCTGACCAGGGGCCCCTCGTGGCCAAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: FDGLGSSCWEGKRSS*AGGLTRGPSWPRLP
Trigger: GGGAAGCCTTGGCCACGAGGGGCCCCTGGTCAGCCCACCTGCCCAGGATGAGCGCTTACCCTCCCAGCAGCTGCTGCCCAGACCATCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
ENSMUST00000150626.2
CDS-3UTR CAA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGAGGACTCGGAGCAGTaGCCGCACCTCGAAGTCACT +
Preference number: 5 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPEDSEQ*PHLEVT
Trigger: AGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCTC...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 90 bp GGGTGCAGCATTCGGGGGCTCCTGCCGGCAGGAGCTGAGGCTCGGTaGTCCTCTACAGAGAGGTTTGATGGTCTGGGCAGCAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GCSIRGLLPAGAEAR*SSTERFDGLGSSCW
Trigger: CCAGCAGCTGCTGCCCAGACCATCAAACCTCTCTGTAGAGGAGCACCGAGCCTCAGCTCCTGCCGGCAGGAGCCCCCGAATGCTGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS GCA 90 bp TGTTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTaGAGCATTCGGGGGCTCCTGCCGGCAGGAGCTGAGGCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: CSWRSTMNGLCWVAG*SIRGLLPAGAEARC
Trigger: GCACCGAGCCTCAGCTCCTGCCGGCAGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS-3UTR CAA 90 bp GGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGCAGCCAGGGATGTGTaGGCTTGTAGGCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: GVAGGNADRPGPALTVLPAARDV*ACRQRE
Trigger: TTCCCTTTGCCTACAAGCCAACACATCCCTGGCTGC...GGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAGTGAGGCCCCGGGGCTaGGCGTCTCCCAGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: GPERRVRNTASSRPWRAGVRPRG*ASPSRS
Trigger: TGAGCGGCTGGGAGACGCCAAGCCCCGGGGCCTCAC...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACATGTTCGATGTCTGCTTaGGTGAGGCCCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: TSSGVAGGNADRPGPALTCSMSA*VRPRGL
Trigger: CAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACA...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 90 bp GGTCCCTGGTGCACTTGTTCGTGGAGATCAACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCTGCCGGCAGGA +
Preference number: 5 (lower is better)
Translates to: GPWCTCSWRSTMNGL*WVAGCSIRGLLPAG
Trigger: TCCTGCCGGCAGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAACAAGTGCACCAGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS CCA 90 bp CGGTGCTCCTCTACAGAGAGGTTTGATGGTCTGGGCAGCAGCTGCTaGGAGGGTAAGCGCTCATCCTGGGCAGGTGGGCTGACCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RCSSTERFDGLGSSC*EGKRSSWAGGLTRG
Trigger: GCCCCTGGTCAGCCCACCTGCCCAGGATGAGCGCTTACCCTCCCAGCAGCTGCTGCCCAGACCATCAAACCTCTCTGTAGAGGAGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS CCA 90 bp CCCTGGTGCACTTGTTCGTGGAGATCAACCATGAACGGGCTCTGCTaGGTGGCTGGGTGCAGCATTCGGGGGCTCCTGCCGGCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: PWCTCSWRSTMNGLC*VAGCSIRGLLPAGA
Trigger: AGCTCCTGCCGGCAGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAACAAGTGCACCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS-3UTR CAA 90 bp GACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCAGGCAAAGGGAAGCCTaGGGTTGTCACTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: DPGTSSGVAGGNADRPGPRQREA*GCHCGD
Trigger: GTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCT...GGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGAGGCAAAGGGAAGCCTaGGGTTGTCACTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPRQREA*GCHCGD
Trigger: GTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCT...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCTGTTCGATGTCTGCTTaGGTGAGGCCCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGCSMSA*VRPRGL
Trigger: CAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACA...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGGCGATACGACGGCAGTaGTTCGATGTCTGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPAIRRQ*FDVCFG
Trigger: ACCAAAGCAGACATCGAACAACTGCCGTCGTATCGC...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 90 bp GCTCGGTGCTCCTCTACAGAGAGGTTTGATGGTCTGGGCAGCAGCTaGTGGGAGGGTAAGCGCTCATCCTGGGCAGGTGGGCTGACCAGG +
Preference number: 5 (lower is better)
Translates to: ARCSSTERFDGLGSS*WEGKRSSWAGGLTR
Trigger: CCTGGTCAGCCCACCTGCCCAGGATGAGCGCTTACCCTCCCAGCAGCTGCTGCCCAGACCATCAAACCTCTCTGTAGAGGAGCACCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS CCA 90 bp AAACTGCCCAAGCGGTGCCATGTGGGTAGGCTGGGGCGGTGGGGCTaGCGGTGGTGGGTGAAGGATGTAGTGGTCACTGGAGATGAGGTG +
Preference number: 5 (lower is better)
Translates to: KLPKRCHVGRLGRWG*RWWVKDVVVTGDEV
Trigger: CACCTCATCTCCAGTGACCACTACATCCTTCACCCACCACCGCCAGCCCCACCGCCCCAGCCTACCCACATGGCACCGCTTGGGCAGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000126717.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CCA 90 bp GGACACAAACTGCCCAAGCGGTGCCATGTGGGTAGGCTGGGGCGGTaGGGCTGGCGGTGGTGGGTGAAGGATGTAGTGGTCACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: GHKLPKRCHVGRLGR*GWRWWVKDVVVTGD
Trigger: ATCTCCAGTGACCACTACATCCTTCACCCACCACCGCCAGCCCCACCGCCCCAGCCTACCCACATGGCACCGCTTGGGCAGTTTGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000126717.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp ACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAAGGCAAAGGGAAGCCTaGGGTTGTCACTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: TSSGVAGGNADRPGPALTRQREA*GCHCGD
Trigger: GTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCT...TGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp CTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCGCAGCCAGGGATGTGTaGGCTTGTAGGCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LTLAPALEWQVGTLTGLAAARDV*ACRQRE
Trigger: TTCCCTTTGCCTACAAGCCAACACATCCCTGGCTGC...GGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGTGTTCGATGTCTGCTTaGGTGAGGCCCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPCSMSA*VRPRGL
Trigger: CAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACA...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp CACAGCCTCCTCCAGACCTTGGAGGGCAGGAATCAGGCCGGGAGGGGCCCCCTGGCGATACGACGGCAGTaGTTCGATGTCTGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: HSLLQTLEGRNQAGRGPLAIRRQ*FDVCFG
Trigger: ACCAAAGCAGACATCGAACAACTGCCGTCGTATCGC...CAGGGGGCCCCTCCCGGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp ACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGGCGATACGACGGCAGTaGTTCGATGTCTGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: TLAPALEWQVGTLTGLAPAIRRQ*FDVCFG
Trigger: ACCAAAGCAGACATCGAACAACTGCCGTCGTATCGC...CGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 90 bp ATCTCGTTATCCAGCCGCTGCAGGGGCATACGTGGGTGCTGGGTCTaGAGGGACACAAACTGCCCAAGCGGTGCCATGTGGGTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: ISLSSRCRGIRGCWV*RDTNCPSGAMWVGW
Trigger: CCAGCCTACCCACATGGCACCGCTTGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAGCGGCTGGATAACGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 90 bp CGAAGGTCCATCTCGTTATCCAGCCGCTGCAGGGGCATACGTGGGTaGTGGGTCTGCAGGGACACAAACTGCCCAAGCGGTGCCATGTGG +
Preference number: 5 (lower is better)
Translates to: RRSISLSSRCRGIRG*WVCRDTNCPSGAMW
Trigger: CCACATGGCACCGCTTGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAGCGGCTGGATAACGAGATGGACCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CCA 90 bp GCAGCAGAGGGGGTAGTGCTGCCCACTGAACATCACGGAGCATGCTaGGAGCTGCTGGGCACTGCAGCCAGGGATGTGTTGGCTTGTAGG +
Preference number: 5 (lower is better)
Translates to: AAEGVVLPTEHHGAC*ELLGTAARDVLACR
Trigger: CCTACAAGCCAACACATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCACTACCCCCTCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000126717.8
ENSMUST00000128257.8
ENSMUST00000129881.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CCA 90 bp CAGGAGCTGAGGCTCGGTGCTCCTCTACAGAGAGGTTTGATGGTCTaGGCAGCAGCTGCTGGGAGGGTAAGCGCTCATCCTGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: QELRLGAPLQRGLMV*AAAAGRVSAHPGQV
Trigger: CACCTGCCCAGGATGAGCGCTTACCCTCCCAGCAGCTGCTGCCCAGACCATCAAACCTCTCTGTAGAGGAGCACCGAGCCTCAGCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS-3UTR CAA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCAGGCAAAGGGAAGCCTaGGGTTGTCACTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGRQREA*GCHCGD
Trigger: GTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCT...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCACAGTCCTCCCCGGTGACATTGGCAGCATaGAAAGGAAGTAGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: EWQVGTLTGLAPPSQSSPVTLAA*KGSRVG
Trigger: TCCTACCCTACTTCCTTTCAATGCTGCCAATGTCAC...CGGGGAGGACTGTGAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCCCCGCCCTCGTGACATTGGCAGCATaGAAAGGAAGTAGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: GTSSGVAGGNADRPGPALVTLAA*KGSRVG
Trigger: TCCTACCCTACTTCCTTTCAATGCTGCCAATGTCAC...GAGGGCGGGGCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS TCA 90 bp GCACTGAGGGCGACAAGGCTGGGCCAGTGGCAGAGGTGGAGTAAGTaGAGCTACCCAAGGGGTGCTGGTCTCCTCGAAGGTCCATCTCGT +
Preference number: 5 (lower is better)
Translates to: ALRATRLGQWQRWSK*SYPRGAGLLEGPSR
Trigger: ACGAGATGGACCTTCGAGGAGACCAGCACCCCTTGGGTAGCTTCACTTACTCCACCTCTGCCACTGGCCCAGCCTTGTCGCCCTCAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 90 bp ATGGCTGTCAGGGTTAAAGCGATACGACGGCAGTTGTTCGATGTCTaGTTTGGTGAGGCCCCGGGGCTTGGCGTCTCCCAGCCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: MAVRVKAIRRQLFDV*FGEAPGLGVSQPLS
Trigger: GCTGAGCGGCTGGGAGACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACAACTGCCGTCGTATCGCTTTAACCCTGACAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CCA 90 bp AGGTCCATCTCGTTATCCAGCCGCTGCAGGGGCATACGTGGGTGCTaGGTCTGCAGGGACACAAACTGCCCAAGCGGTGCCATGTGGGTA +
Preference number: 5 (lower is better)
Translates to: RSISLSSRCRGIRGC*VCRDTNCPSGAMWV
Trigger: TACCCACATGGCACCGCTTGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAGCGGCTGGATAACGAGATGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CCA 90 bp TCCTCGAAGGTCCATCTCGTTATCCAGCCGCTGCAGGGGCATACGTaGGTGCTGGGTCTGCAGGGACACAAACTGCCCAAGCGGTGCCAT +
Preference number: 5 (lower is better)
Translates to: SSKVHLVIQPLQGHT*VLGLQGHKLPKRCH
Trigger: ATGGCACCGCTTGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAGCGGCTGGATAACGAGATGGACCTTCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCTGTTCGATGTCTGCTTaGGTGAGGCCCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SLEPWPICSWSLAGILSSCSMSA*VRPRGL
Trigger: CAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACA...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp AGCTTGGAGCCCTGGCCCATTTGCTCATGGAGCCTGGCTGGGATACTCTCCAGCGAGGACTCGGAGCAGTaGCCGCACCTCGAAGTCACT +
Preference number: 5 (lower is better)
Translates to: SLEPWPICSWSLAGILSSEDSEQ*PHLEVT
Trigger: AGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCTC...GCTGGAGAGTATCCCAGCCAGGCTCCATGAGCAAATGGGCCAGGGCTCCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 90 bp GCGGTGGGGGTGGTGGCAGCGGCTGTTGCAGGCGGTATCTCTGTGTaGTCAGTCTTCGTGGCATCATGTGGGAATATGGCACACCAAAGG +
Preference number: 5 (lower is better)
Translates to: AVGVVAAAVAGGISV*SVFVASCGNMAHQR
Trigger: CCTTTGGTGTGCCATATTCCCACATGATGCCACGAAGACTGAGCACACAGAGATACCGCCTGCAACAGCCGCTGCCACCACCCCCACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp ACTGACCCTGGCACCAGCTCTGGAGTGGCAGGTGGGAACGCTGACAGGCCTGGCGTGACATTGGCAGCATaGAAAGGAAGTAGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: TDPGTSSGVAGGNADRPGVTLAA*KGSRVG
Trigger: TCCTACCCTACTTCCTTTCAATGCTGCCAATGTCAC...GCCAGGCCTGTCAGCGTTCCCACCTGCCACTCCAGAGCTGGTGCCAGGGTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAGAGGACTCGGAGCAGTaGCCGCACCTCGAAGTCACT +
Preference number: 5 (lower is better)
Translates to: EVEVHVLPDPCPHRIARREDSEQ*PHLEVT
Trigger: AGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCTC...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GGACCTGAAAGGAGGGTAAGGAACACAGCCTCCTCCAGACCTTGGAGGGCAGGAGCAGCCAGGGATGTGTaGGCTTGTAGGCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: GPERRVRNTASSRPWRAGAARDV*ACRQRE
Trigger: TTCCCTTTGCCTACAAGCCAACACATCCCTGGCTGC...TCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCTTTCAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GTGGGACACAGGCCCTGGCTGGAGAGGAGATGCCCTGAAAAGCAGACGGTCCCGGTGACATTGGCAGCATaGAAAGGAAGTAGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: VGHRPWLERRCPEKQTVPVTLAA*KGSRVG
Trigger: TCCTACCCTACTTCCTTTCAATGCTGCCAATGTCAC...CGGGACCGTCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp AGGGTGGCTATTCCTTTGTCCGTCTGGGGTCTGGGGAAATCACACCAGCCACCAAGGCAAAGGGAAGCCTaGGGTTGTCACTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: RVAIPLSVWGLGKSHQPPRQREA*GCHCGD
Trigger: GTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCT...TGGTGGCTGGTGTGATTTCCCCAGACCCCAGACGGACAAAGGAATAGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp TTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGACTCACCCAGGGCAGCCAGGGATGTGTaGGCTTGTAGGCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: FMSSLTPVLTGLLGDSPRAARDV*ACRQRE
Trigger: TTCCCTTTGCCTACAAGCCAACACATCCCTGGCTGC...CCTGGGTGAGTCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp GAGGTGGAGGTTCATGTCCTCCCTGACCCCTGTCCTCACAGGATTGCTAGGAGAGCAGCCAGGGATGTGTaGGCTTGTAGGCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: EVEVHVLPDPCPHRIARRAARDV*ACRQRE
Trigger: TTCCCTTTGCCTACAAGCCAACACATCCCTGGCTGC...TCTCCTAGCAATCCTGTGAGGACAGGGGTCAGGGAGGACATGAACCTCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS TCA 90 bp CCTCATAGTTCTCCATCTCTACGTCATCCACGTCCAGGTCCAAGCTaGTGGTGGGGCCCACGGTGGTCGGTGACATTGGCAGCATTGAAA +
Preference number: 5 (lower is better)
Translates to: PHSSPSLRHPRPGPS*WWGPRWSVTLAALK
Trigger: TTTCAATGCTGCCAATGTCACCGACCACCGTGGGCCCCACCATCAGCTTGGACCTGGACGTGGATGACGTAGAGATGGAGAACTATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp TGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGGCTACTCCCTGCGATACGACGGCAGTaGTTCGATGTCTGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: CLSGTKQENSGNGLWLLPAIRRQ*FDVCFG
Trigger: ACCAAAGCAGACATCGAACAACTGCCGTCGTATCGC...AGGGAGTAGCCAGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp CTGACTGCCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGCGATACGACGGCAGTaGTTCGATGTCTGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LTAYVCLEPNRRTQEMVSAIRRQ*FDVCFG
Trigger: ACCAAAGCAGACATCGAACAACTGCCGTCGTATCGC...AGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp CTGACTGCCTATGTCTGTCTGGAACCAAACAGGAGAACTCAGGAAATGGTCTCTGTGACATTGGCAGCATaGAAAGGAAGTAGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: LTAYVCLEPNRRTQEMVSVTLAA*KGSRVG
Trigger: TCCTACCCTACTTCCTTTCAATGCTGCCAATGTCAC...AGAGACCATTTCCTGAGTTCTCCTGTTTGGTTCCAGACAGACATAGGCAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGTGTTCGATGTCTGCTTaGGTGAGGCCCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGCSMSA*VRPRGL
Trigger: CAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACA...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGGCAGCCAGGGATGTGTaGGCTTGTAGGCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGAARDV*ACRQRE
Trigger: TTCCCTTTGCCTACAAGCCAACACATCCCTGGCTGC...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS-3UTR CAA 90 bp AATATAGAAACATCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGTGGGCCTCTACAGAGAGGTTaGATGGTCTGGGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: NIETSPGVIYSKTLGSCGPLQRG*MVWAAA
Trigger: AGCTGCTGCCCAGACCATCAAACCTCTCTGTAGAGG...CCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125871.8
CDS GCA 72 bp TCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCTaGCGGCAGGAGCTGAGGCTCGGTGCTCCTCTACAG +
Preference number: 6 (lower is better)
Translates to: SAGWLGAAFGGS*RQELRLGAPLQ
Trigger: CTGTAGAGGAGCACCGAGCCTCAGCTCCTGCCGGCAGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS GCA 72 bp GGTAGGTGTGGTAGGGCCCAGGGAGCTGCTGCATGGTaGACGCCTGGATCAGCGGAGGTGGGAGGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: GRCGRAQGAAAW*TPGSAEVGGSR
Trigger: TCTGCTGCCTCCCACCTCCGCTGATCCAGGCGTGCACCATGCAGCAGCTCCCTGGGCCCTACCACACCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037422.16
ENSMUST00000126717.8
ENSMUST00000128257.8
ENSMUST00000129881.8
ENSMUST00000177950.8
CDS CCA 72 bp GTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTaGGTGCAGCATTCGGGGGCTCCTGCCGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: VEINHERALLGG*VQHSGAPAGRS
Trigger: GCTCCTGCCGGCAGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS GCA 72 bp GGCATACGTGGGTGCTGGGTCTGCAGGGACACAAACTaGCCAAGCGGTGCCATGTGGGTAGGCTGGGGCGGT +
Preference number: 6 (lower is better)
Translates to: GIRGCWVCRDTN*PSGAMWVGWGG
Trigger: ACCGCCCCAGCCTACCCACATGGCACCGCTTGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 72 bp TCCAGCCGCTGCAGGGGCATACGTGGGTGCTGGGTCTaGAGGGACACAAACTGCCCAAGCGGTGCCATGTGG +
Preference number: 6 (lower is better)
Translates to: SSRCRGIRGCWV*RDTNCPSGAMW
Trigger: CCACATGGCACCGCTTGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAGCGGCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 72 bp AGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTaGAGCATTCGGGGGCTCCTGCCGGCAGGAGCTGAG +
Preference number: 6 (lower is better)
Translates to: RSTMNGLCWVAG*SIRGLLPAGAE
Trigger: CTCAGCTCCTGCCGGCAGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS TCA 72 bp AGCGATACGACGGCAGTTGTTCGATGTCTGCTTTGGTaGGGCCCCGGGGCTTGGCGTCTCCCAGCCGCTCAG +
Preference number: 6 (lower is better)
Translates to: SDTTAVVRCLLW*GPGAWRLPAAQ
Trigger: CTGAGCGGCTGGGAGACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACAACTGCCGTCGTATCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CCA 72 bp CCTCCCTGGGCACCTCGGAGGCATCCGCCCGGCAAATaGGACAGGTCCGGTTGGCCTTCAACCACTTGTCAA +
Preference number: 6 (lower is better)
Translates to: PPWAPRRHPPGK*DRSGWPSTTCQ
Trigger: TTGACAAGTGGTTGAAGGCCAACCGGACCTGTCCCATTTGCCGGGCGGATGCCTCCGAGGTGCCCAGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CAA 90 bp CTGTCAGGGTTAAAGCGATACGACGGCAGTTGTTCGATGTCTGCTTaGGTGAGGCCCCGGGGCTTGGCGTCTCCCAGCCGCTCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: LSGLKRYDGSCSMSA*VRPRGLASPSRSAR
Trigger: CCTGGCTGAGCGGCTGGGAGACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACAACTGCCGTCGTATCGCTTTAACCCTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CAA 90 bp TCCTGCCGGCAGGAGCTGAGGCTCGGTGCTCCTCTACAGAGAGGTTaGATGGTCTGGGCAGCAGCTGCTGGGAGGGTAAGCGCTCATCCT +
Preference number: 6 (lower is better)
Translates to: SCRQELRLGAPLQRG*MVWAAAAGRVSAHP
Trigger: AGGATGAGCGCTTACCCTCCCAGCAGCTGCTGCCCAGACCATCAAACCTCTCTGTAGAGGAGCACCGAGCCTCAGCTCCTGCCGGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS CCA 72 bp ACTTGTTCGTGGAGATCAACCATGAACGGGCTCTGCTaGGTGGCTGGGTGCAGCATTCGGGGGCTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: TCSWRSTMNGLC*VAGCSIRGLLP
Trigger: CGGCAGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAACAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS CAA 72 bp AGTTGTTCGATGTCTGCTTTGGTGAGGCCCCGGGGCTaGGCGTCTCCCAGCCGCTCAGCCAGGTTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: SCSMSALVRPRG*ASPSRSARFRR
Trigger: TCTCCTGAACCTGGCTGAGCGGCTGGGAGACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS TCA 72 bp GCGACAAGGCTGGGCCAGTGGCAGAGGTGGAGTAAGTaGAGCTACCCAAGGGGTGCTGGTCTCCTCGAAGGT +
Preference number: 6 (lower is better)
Translates to: ATRLGQWQRWSK*SYPRGAGLLEG
Trigger: ACCTTCGAGGAGACCAGCACCCCTTGGGTAGCTTCACTTACTCCACCTCTGCCACTGGCCCAGCCTTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 72 bp ATCTCGTTATCCAGCCGCTGCAGGGGCATACGTGGGTaGTGGGTCTGCAGGGACACAAACTGCCCAAGCGGT +
Preference number: 6 (lower is better)
Translates to: ISLSSRCRGIRG*WVCRDTNCPSG
Trigger: ACCGCTTGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAGCGGCTGGATAACGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 72 bp TGCACTTGTTCGTGGAGATCAACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: CTCSWRSTMNGL*WVAGCSIRGLL
Trigger: CAGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAACAAGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS CAA 72 bp TTAAAGCGATACGACGGCAGTTGTTCGATGTCTGCTTaGGTGAGGCCCCGGGGCTTGGCGTCTCCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: LKRYDGSCSMSA*VRPRGLASPSR
Trigger: GCGGCTGGGAGACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACAACTGCCGTCGTATCGCTTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS TCA 72 bp TCTCCATCTCTACGTCATCCACGTCCAGGTCCAAGCTaGTGGTGGGGCCCACGGTGGTCGGTGACATTGGCA +
Preference number: 6 (lower is better)
Translates to: SPSLRHPRPGPS*WWGPRWSVTLA
Trigger: TGCCAATGTCACCGACCACCGTGGGCCCCACCATCAGCTTGGACCTGGACGTGGATGACGTAGAGATGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 72 bp TGCTGCCCACTGAACATCACGGAGCATGCTGGGAGCTaGTGGGCACTGCAGCCAGGGATGTGTTGGCTTGTA +
Preference number: 6 (lower is better)
Translates to: CCPLNITEHAGS*WALQPGMCWLV
Trigger: TACAAGCCAACACATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
ENSMUST00000128257.8
ENSMUST00000129881.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 72 bp AGGGTTAAAGCGATACGACGGCAGTTGTTCGATGTCTaGTTTGGTGAGGCCCCGGGGCTTGGCGTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: RVKAIRRQLFDV*FGEAPGLGVSQ
Trigger: CTGGGAGACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACAACTGCCGTCGTATCGCTTTAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CCA 72 bp AGGCTCGGTGCTCCTCTACAGAGAGGTTTGATGGTCTaGGCAGCAGCTGCTGGGAGGGTAAGCGCTCATCCT +
Preference number: 6 (lower is better)
Translates to: RLGAPLQRGLMV*AAAAGRVSAHP
Trigger: AGGATGAGCGCTTACCCTCCCAGCAGCTGCTGCCCAGACCATCAAACCTCTCTGTAGAGGAGCACCGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
CDS CAA 90 bp CTGCTCAGACTGATGGCTGTCAGGGTTAAAGCGATACGACGGCAGTaGTTCGATGTCTGCTTTGGTGAGGCCCCGGGGCTTGGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: LLRLMAVRVKAIRRQ*FDVCFGEAPGLGVS
Trigger: GGAGACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACAACTGCCGTCGTATCGCTTTAACCCTGACAGCCATCAGTCTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS TCA 72 bp GGAGGACTCGGAGCAGTTGCCGCACCTCGAAGTCACTaGAGCAGACCACACACAGAGTCTGCTCAGACTGAT +
Preference number: 6 (lower is better)
Translates to: GGLGAVAAPRSH*SRPHTESAQTD
Trigger: ATCAGTCTGAGCAGACTCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGTGCGGCAACTGCTCCGAGTCCTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS GCA 72 bp GTGGTGGCAGCGGCTGTTGCAGGCGGTATCTCTGTGTaGTCAGTCTTCGTGGCATCATGTGGGAATATGGCA +
Preference number: 6 (lower is better)
Translates to: VVAAAVAGGISV*SVFVASCGNMA
Trigger: TGCCATATTCCCACATGATGCCACGAAGACTGAGCACACAGAGATACCGCCTGCAACAGCCGCTGCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CAA 72 bp GCCAGGGATGTGTTGGCTTGTAGGCAAAGGGAAGCCTaGGGTTGTCACTGTGGTGACCGTGTAGGACAGAGG +
Preference number: 6 (lower is better)
Translates to: ARDVLACRQREA*GCHCGDRVGQR
Trigger: CCTCTGTCCTACACGGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCTACAAGCCAACACATCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
ENSMUST00000128257.8
ENSMUST00000129881.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CAA 72 bp ACATTGGCAGCATTGAAAGGAAGTAGGGTAGGAAGCTaGGGTAGTAAGATGGTGGCGGCGGCGGTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: TLAALKGSRVGS*GSKMVAAAVGV
Trigger: CACCCCCACCGCCGCCGCCACCATCTTACTACCCAAGCTTCCTACCCTACTTCCTTTCAATGCTGCCAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CAA 72 bp CTGATGGCTGTCAGGGTTAAAGCGATACGACGGCAGTaGTTCGATGTCTGCTTTGGTGAGGCCCCGGGGCTT +
Preference number: 6 (lower is better)
Translates to: LMAVRVKAIRRQ*FDVCFGEAPGL
Trigger: AAGCCCCGGGGCCTCACCAAAGCAGACATCGAACAACTGCCGTCGTATCGCTTTAACCCTGACAGCCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS CCA 72 bp TGTAGAGACTCGCCAGTGACCCACAGGGGCAGAAGGTaGCCACTTAGTCACTGCCAAAGTCCATGGTCTCAT +
Preference number: 6 (lower is better)
Translates to: CRDSPVTHRGRR*PLSHCQSPWSH
Trigger: ATGAGACCATGGACTTTGGCAGTGACTAAGTGGCCACCTTCTGCCCCTGTGGGTCACTGGCGAGTCTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000125871.8
ENSMUST00000125927.8
ENSMUST00000126717.8
ENSMUST00000150626.2
CDS CAA 72 bp TGGTGGGGCCCACGGTGGTCGGTGACATTGGCAGCATaGAAAGGAAGTAGGGTAGGAAGCTTGGGTAGTAAG +
Preference number: 6 (lower is better)
Translates to: WWGPRWSVTLAA*KGSRVGSLGSK
Trigger: CTTACTACCCAAGCTTCCTACCCTACTTCCTTTCAATGCTGCCAATGTCACCGACCACCGTGGGCCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8
CDS TCA 72 bp TCACTGAAGCAGACCACACACAGAGTCTGCTCAGACTaGTGGCTGTCAGGGTTAAAGCGATACGACGGCAGT +
Preference number: 6 (lower is better)
Translates to: SLKQTTHRVCSD*WLSGLKRYDGS
Trigger: ACTGCCGTCGTATCGCTTTAACCCTGACAGCCATCAGTCTGAGCAGACTCTGTGTGTGGTCTGCTTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037422.16
ENSMUST00000125871.8
ENSMUST00000128257.8
ENSMUST00000134862.8
ENSMUST00000150806.8
ENSMUST00000177950.8