Pregenerated sensors for RNF43 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034177Ensembl transcript IDs: ENSMUST00000040089.5, ENSMUST00000092800.12, ENSMUST00000121782.9, ENSMUST00000165679.8
Found 444 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTaGTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: SGPRKHGERRCLLWS*SSQERDPGARSNPE Trigger: CTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR GCA 90 bp | CAGCACTCTCCTTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATaGTTGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCC | + |
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Preference number: 1 (lower is better) Translates to: QHSPSSGPRKHGERR*LLWSCSSQERDPGA Trigger: GGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAGGAGAGTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR CCA 90 bp | CCTTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTaGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAAC | + |
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Preference number: 1 (lower is better) Translates to: PSSGPRKHGERRCLL*SCSSQERDPGARSN Trigger: GTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR GCA 90 bp | TGCAGACAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTaGACTCGCCATCAGCACTCTCCTTCCAGTGGTCCCAGGAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: CRQAWELGQEIAPPA*TRHQHSPSSGPRKH Trigger: ATGCTTCCTGGGACCACTGGAAGGAGAGTGCTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTGTCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR GCA 90 bp | GGCTGGCTGGCTGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTaGAGACAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCC | + |
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Preference number: 1 (lower is better) Translates to: GWLAGHKTFCTVGVF*RQAWELGQEIAPPA Trigger: GGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGCCAGCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR GCA 90 bp | GCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTaGAGACCCACGAGGTTACATGTCGCCATTCTCCATCTCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: AGFVWLTLGRWASGP*RPTRLHVAILHLCS Trigger: GGAGCAGAGATGGAGAATGGCGACATGTAACCTCGTGGGTCTGCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR GCA 90 bp | AAAGCCACAGGAGGCACCATCAGCCCTTACCCACGTGGTACAAGCTaGCCGGGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAG | + |
|
Preference number: 1 (lower is better) Translates to: KATGGTISPYPRGTS*PGQLSAPLPLAHLQ Trigger: CTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCCCGGGCAGCTTGTACCACGTGGGTAAGGGCTGATGGTGCCTCCTGTGGCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR GCA 90 bp | ACTGGATACTGGCTGGCTGGCTGGCTGGCTGGACACAAGACTTTCTaGACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TGYWLAGWLAGHKTF*TVGVFCRQAWELGQ Trigger: CTGCCCCAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGCCAGCCAGCCAGCCAGCCAGTATCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR GCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTaGTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCC | + |
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Preference number: 1 (lower is better) Translates to: GQLSAPLPLAHLQLG*WFCMAYTGKVGLRA Trigger: GGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CCA 90 bp | GCCCGGGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTaGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCC | + |
|
Preference number: 1 (lower is better) Translates to: ARANFLLHSHLHTFS*VAGFVWLTLGRWAS Trigger: GGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCCCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CCA 90 bp | GGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTaGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCAT | + |
|
Preference number: 1 (lower is better) Translates to: GHKTFCTVGVFCRQA*ELGQEIAPPACTRH Trigger: ATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR CCA 90 bp | ACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTaGGCCTCCGGGCCCTGCAGACCCACGAGGTTACATGTCGCCATT | + |
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Preference number: 1 (lower is better) Translates to: TFSWVAGFVWLTLGR*ASGPCRPTRLHVAI Trigger: AATGGCGACATGTAACCTCGTGGGTCTGCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CCA 90 bp | ACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTaGGAAGGTGGGCCTCCGGGCCCTGCAGACCCACGAGGTTACATG | + |
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Preference number: 1 (lower is better) Translates to: TCTPSVGLLVLYGLH*EGGPPGPADPRGYM Trigger: CATGTAACCTCGTGGGTCTGCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CCA 90 bp | CAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTaGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTG | + |
|
Preference number: 1 (lower is better) Translates to: QLSAPLPLAHLQLGC*FCMAYTGKVGLRAL Trigger: CAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR GCA 90 bp | ACGTGGTACAAGCTGCCCGGGCCAACTTTCTGCTCCACTCCCACTTaGACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGG | + |
|
Preference number: 1 (lower is better) Translates to: TWYKLPGPTFCSTPT*TPSVGLLVLYGLHW Trigger: CCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCCCGGGCAGCTTGTACCACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CCA 90 bp | TACCCCACAAATGCATACTGGATACTGGCTGGCTGGCTGGCTGGCTaGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGC | + |
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Preference number: 1 (lower is better) Translates to: YPTNAYWILAGWLAG*TQDFLHCRCVLQTS Trigger: GCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGCCAGCCAGCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR CCA 90 bp | GACTTGGAGGGAGGAAAGCTTGGAGTATTGATTCCCCTCCATTCCTaGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTGACAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: DLEGGKLGVLIPLHS*SLPQRNWSYPSDKE Trigger: CTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAATACTCCAAGCTTTCCTCCCTCCAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CCA 90 bp | GTAGACTTCCTTTCTGCCTGCCTTGGACTTGGAGGGAGGAAAGCTTaGAGTATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: VDFLSACLGLGGRKA*SIDSPPFLVSTSEE Trigger: TTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAATACTCCAAGCTTTCCTCCCTCCAAGTCCAAGGCAGGCAGAAAGGAAGTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCATCAGTGCTTGCTGTGGTCCTaGTCCTCCCAGGAGCGGGAC | + |
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Preference number: 2 (lower is better) Translates to: QAWELGQEIAPPACTRHQCLLWS*SSQERD Trigger: GTCCCGCTCCTGGGAGGAGCAGGACCACAGCAAGCA...CTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCTGCTTGCTGTGGTCCTaGTCCTCCCAGGAGCGGGAC | + |
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Preference number: 2 (lower is better) Translates to: AFSEPTGLCELEAGAEETCLLWS*SSQERD Trigger: GTCCCGCTCCTGGGAGGAGCAGGACCACAGCAAGCA...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCATCAGAGGAGATGCTTGCTGTaGTCCTGCTCCTCCCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QAWELGQEIAPPACTRHQRRCLL*SCSSQE Trigger: CTCCTGGGAGGAGCAGGACCACAGCAAGCATCTCCT...CTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCGGCCAGGTCGAACCCTaGGCCATCTGGAGCACACTC | + |
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Preference number: 2 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLGQVEP*AIWSTL Trigger: GAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCC...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTTACTGGCTGGCTGGCTaGCTGGCTGGACACAAGACT | + |
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Preference number: 2 (lower is better) Translates to: VGLLVLYGLHWEGGPPGPYWLAG*LAGHKT Trigger: AGTCTTGTGTCCAGCCAGCCAGCCAGCCAGCCAGTA...AGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CAA 90 bp | TTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTaGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: FCSTPTCTPSVGLLV*YGLHWEGGPPGPAD Trigger: GTCTGCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CAA 90 bp | GGGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTaGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGC | + |
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Preference number: 2 (lower is better) Translates to: GPTFCSTPTCTPSVG*LVLYGLHWEGGPPG Trigger: GCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTAGAACCGCTCCTCCCTaGGCACCAGCCAGGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFRTAPP*APAREK Trigger: CTTCTCCCTGGCTGGTGCTCAGGGAGGAGCGGTTCT...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAAGAACAGGAAGGAAGAACCGCTCCTCCCTGAGCACCAGCCAGGGAGAAGGAGGAGATGCTTGCTGTaGTCCTGCTCCTCCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: CKNRKEEPLLPEHQPGRRRRCLL*SCSSQE Trigger: CTCCTGGGAGGAGCAGGACCACAGCAAGCATCTCCT...CCTTCTCCCTGGCTGGTGCTCAGGGAGGAGCGGTTCTTCCTTCCTGTTCTTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTCTTACACTGGGAAGGTaGGCCTCCGGGCCCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFLTLGR*ASGPCR Trigger: TCTGCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAG...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CAA 90 bp | TGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTaGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCA | + |
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Preference number: 2 (lower is better) Translates to: WTQDFLHCRCVLQTS*GAGAGNSTSRLHSP Trigger: TGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR CAA 90 bp | TGCCCGGGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTaGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: CPGQLSAPLPLAHLQ*GCWFCMAYTGKVGL Trigger: GAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCCCGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCATTTTGCCCCTGCTTGCTGTGGTCCTaGTCCTCCCAGGAGCGGGAC | + |
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Preference number: 2 (lower is better) Translates to: IDSEERRFPRRIPCPFCPCLLWS*SSQERD Trigger: GTCCCGCTCCTGGGAGGAGCAGGACCACAGCAAGCA...GGGGCAAAATGGACATGGGATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGCATAGCACCTCCCGCCTaGACTCGCCATCAGCACTCT | + |
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Preference number: 2 (lower is better) Translates to: LSLEESTPQMHTGYWLAGIAPPA*TRHQHS Trigger: AGAGTGCTGATGGCGAGTGCAGGCGGGAGGTGCTAT...GCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR-3UTR TCA 90 bp | CATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTCCTCTGAGACCCAGCGGGGCTTaGGGAAAGAGCAGCACCTTT | + |
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Preference number: 2 (lower is better) Translates to: HLCSKNLSERTPVVVPPLRPSGA*GKSSTF Trigger: AAAGGTGCTGCTCTTTCCTCAAGCCCCGCTGGGTCT...CAGAGGAGGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCATTTTGCCCCGGCAAGGATACTGCCTaGGGGGCTGACAGTGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: IDSEERRFPRRIPCPFCPGKDTA*GADSGQ Trigger: CTGACCACTGTCAGCCCCTCAGGCAGTATCCTTGCC...GGGGCAAAATGGACATGGGATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAATGCTTGCTGTGGTCCTaGTCCTCCCAGGAGCGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PTCTPSVGLLVLYGLHWECLLWS*SSQERD Trigger: GTCCCGCTCCTGGGAGGAGCAGGACCACAGCAAGCA...TTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR GCA 90 bp | CATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTCCTCTGGCGAAAGGAGATGCTTaGTGTGGTCCTGCTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: HLCSKNLSERTPVVVPPLAKGDA*CGPAPP Trigger: GGGAGGAGCAGGACCACAGCAAGCATCTCCTTTCGC...CAGAGGAGGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGAAGGTACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTGGCTGGCTGGCTGGCTaGACACAAGACTTTCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: REKVQRDLSWDWGSPKLLGWLAG*TQDFLH Trigger: GTGCAGAAAGTCTTGTGTCCAGCCAGCCAGCCAGCC...AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTACCTTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTGGCTGGCTGGCTGGCTaGACACAAGACTTTCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFGWLAG*TQDFLH Trigger: GTGCAGAAAGTCTTGTGTCCAGCCAGCCAGCCAGCC...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTCCTCTGTACTGGCTGGCTGGCTaGCTGGCTGGACACAAGACT | + |
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Preference number: 2 (lower is better) Translates to: HLCSKNLSERTPVVVPPLYWLAG*LAGHKT Trigger: AGTCTTGTGTCCAGCCAGCCAGCCAGCCAGCCAGTA...CAGAGGAGGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGAAGGTACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTTACTGGCTGGCTGGCTaGCTGGCTGGACACAAGACT | + |
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Preference number: 2 (lower is better) Translates to: REKVQRDLSWDWGSPKLLYWLAG*LAGHKT Trigger: AGTCTTGTGTCCAGCCAGCCAGCCAGCCAGCCAGTA...AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTACCTTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCTTTCTGCCTGCCTTaGACTTGGAGGGAGGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LDASLPIDSEERRFPRRIPFCLP*TWREES Trigger: GCTTTCCTCCCTCCAAGTCCAAGGCAGGCAGAAAGG...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR TCA 90 bp | TACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTCTTCTTTTGTGGCCAGGTCGAACCCTaGGCCATCTGGAGCACACTC | + |
|
Preference number: 2 (lower is better) Translates to: YRETSLGTGAHLNSFFFCGQVEP*AIWSTL Trigger: GAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCC...ACAAAAGAAGAAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCAGGAGATGCTTGCTGTaGTCCTGCTCCTCCCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HSPSLLQEPLREDSCSCARRCLL*SCSSQE Trigger: CTCCTGGGAGGAGCAGGACCACAGCAAGCATCTCCT...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGGCACTCTCCTTCCAGTaGTCCCAGGAAGCATGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: GHKTFCTVGVFCRQAWELALSFQ*SQEAWR Trigger: TCGCCATGCTTCCTGGGACCACTGGAAGGAGAGTGC...CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACGAGGTTACATGTCGCCATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGCTGGCTGGCTGGCTaGCTGGACACAAGACTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: PRGYMSPFSISAPRTSQRGWLAG*LDTRLS Trigger: AGAAAGTCTTGTGTCCAGCCAGCCAGCCAGCCAGCC...TCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATGGCGACATGTAACCTCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCATTTTGCCCCATACTGGATACTGGCTaGCTGGCTGGCTGGCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: IDSEERRFPRRIPCPFCPILDTG*LAGWLD Trigger: GTCCAGCCAGCCAGCCAGCCAGCCAGTATCCAGTAT...GGGGCAAAATGGACATGGGATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACGAGGTTACATGTCGCCATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAATACTGGATACTGGCTaGCTGGCTGGCTGGCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PRGYMSPFSISAPRTSQRILDTG*LAGWLD Trigger: GTCCAGCCAGCCAGCCAGCCAGCCAGTATCCAGTAT...TCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATGGCGACATGTAACCTCGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCGACCTCTCTTGGGACTaGGGCTCACCTAAACTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LDASLPIDSEERRFPRRIDLSWD*GSPKLL Trigger: AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTC...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCAGAGAGACCTCTCTTaGGACTGGGGCTCACCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: LDASLPIDSEERRFPRRIQRDLS*DWGSPK Trigger: TTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTG...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCATTTTGCCCCTTGTATGGCTTACACTaGGAAGGTGGGCCTCCGGGC | + |
|
Preference number: 2 (lower is better) Translates to: IDSEERRFPRRIPCPFCPLYGLH*EGGPPG Trigger: GCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAA...GGGGCAAAATGGACATGGGATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACGAGGTTACATGTCGCCATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGACCCCCAGTGAAGCCTTaGAAGGAGGTGAGACGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: PRGYMSPFSISAPRTSQRPPVKP*KEVRRD Trigger: ATCACGTCTCACCTCCTTTCAAGGCTTCACTGGGGG...TCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATGGCGACATGTAACCTCGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGCCCCCAGTGAAGCCTTaGAAGGAGGTGAGACGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: IDSPPFLVSTSEELELPEPPVKP*KEVRRD Trigger: ATCACGTCTCACCTCCTTTCAAGGCTTCACTGGGGG...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCACTGTAGGTGTGTTCTaGAGACAAGCTTGGGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LDASLPIDSEERRFPRRITVGVF*RQAWEL Trigger: CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGT...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGCACTCTCCTTCCAGTaGTCCCAGGAAGCATGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: PTCTPSVGLLVLYGLHWEALSFQ*SQEAWR Trigger: TCGCCATGCTTCCTGGGACCACTGGAAGGAGAGTGC...TTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGCTTCTGCAGACAAGCTTaGGAGCTGGGGCAGGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: LSLEESTPQMHTGYWLAGFCRQA*ELGQEI Trigger: TATTTCCTGCCCCAGCTCCCAAGCTTGTCTGCAGAA...GCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCATGCATACTGGATACTaGCTGGCTGGCTGGCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HSPSLLQEPLREDSCSCAMHTGY*LAGWLA Trigger: AGCCAGCCAGCCAGCCAGCCAGTATCCAGTATGCAT...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CAA 90 bp | TCCTTTCTGCCTGCCTTGGACTTGGAGGGAGGAAAGCTTGGAGTATaGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: SFLPALDLEGGKLGV*IPLHSWSLPQRNWS Trigger: ACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAATACTCCAAGCTTTCCTCCCTCCAAGTCCAAGGCAGGCAGAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGATAGCACCTCCCGCCTaGACTCGCCATCAGCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: QKLSLEESTPQMHTGYWLIAPPA*TRHQHS Trigger: AGAGTGCTGATGGCGAGTGCAGGCGGGAGGTGCTAT...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTGACAAGGAGTTCTGCAGACAAGCTTaGGAGCTGGGGCAGGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: LHSWSLPQRNWSYPSDKEFCRQA*ELGQEI Trigger: TATTTCCTGCCCCAGCTCCCAAGCTTGTCTGCAGAA...CTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGCCCACAAATGCATACTaGATACTGGCTGGCTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: IDSPPFLVSTSEELELPEPTNAY*ILAGWL Trigger: CAGCCAGCCAGCCAGTATCCAGTATGCATTTGTGGG...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCGACCTCTCTTGGGACTaGGGCTCACCTAAACTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HSPSLLQEPLREDSCSCADLSWD*GSPKLL Trigger: AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTC...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGCAGAGAGACCTCTCTTaGGACTGGGGCTCACCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: IDSPPFLVSTSEELELPEQRDLS*DWGSPK Trigger: TTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTG...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTCCTCTGAACAGTCCCCACCTCTaGGACAGACCTCTATTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HLCSKNLSERTPVVVPPLNSPHL*DRPLFL Trigger: AAGGAATAGAGGTCTGTCCCAGAGGTGGGGACTGTT...CAGAGGAGGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTATTCCCCTCCATTCCTaGTCTCTACCTCAGAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFIPLHS*SLPQRN Trigger: GTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAAT...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CAA 90 bp | TCAGATATAAATACCCATGTGGGTGCCTGGATGCCAGTCTCCCCATaGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SDINTHVGAWMPVSP*TLRREGSQGGSHVH Trigger: ATGGACATGGGATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAGGCACCCACATGGGTATTTATATCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGACTGTAGGTGTGTTCTaGAGACAAGCTTGGGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: IDSPPFLVSTSEELELPETVGVF*RQAWEL Trigger: CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGT...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTGACAAGGAGGGACACAAGACTTTCTaGACTGTAGGTGTGTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LHSWSLPQRNWSYPSDKEGHKTF*TVGVFC Trigger: GCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC...CTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTTCTGCAGACAAGCTTaGGAGCTGGGGCAGGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: HSPSLLQEPLREDSCSCAFCRQA*ELGQEI Trigger: TATTTCCTGCCCCAGCTCCCAAGCTTGTCTGCAGAA...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCATTTTGCCCCAACAGTCCCCACCTCTaGGACAGACCTCTATTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: IDSEERRFPRRIPCPFCPNSPHL*DRPLFL Trigger: AAGGAATAGAGGTCTGTCCCAGAGGTGGGGACTGTT...GGGGCAAAATGGACATGGGATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCAACAGTCCCCACCTCTaGGACAGACCTCTATTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HSPSLLQEPLREDSCSCANSPHL*DRPLFL Trigger: AAGGAATAGAGGTCTGTCCCAGAGGTGGGGACTGTT...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTACCCGAGTGACAAGGAGTTTGATAATCAAAAGATTCATCCCAGGCAGGTCATAGCACCTCCCGCCTaGACTCGCCATCAGCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: SYPSDKEFDNQKIHPRQVIAPPA*TRHQHS Trigger: AGAGTGCTGATGGCGAGTGCAGGCGGGAGGTGCTAT...GACCTGCCTGGGATGAATCTTTTGATTATCAAACTCCTTGTCACTCGGGTAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR GCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCGGACACAAGACTTTCTaGACTGTAGGTGTGTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: HSPSLLQEPLREDSCSCAGHKTF*TVGVFC Trigger: GCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR GCA 90 bp | CCACGAGGTTACATGTCGCCATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAAGTCTACCCCACAAATaGATACTGGATACTGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PRGYMSPFSISAPRTSQRSLPHK*ILDTGW Trigger: CCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACT...TCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATGGCGACATGTAACCTCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGCCATTCTCCATCTCTaGTCCAAGAACCTCTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PTCTPSVGLLVLYGLHWEAILHL*SKNLSE Trigger: CTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATGGC...TTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR CAA 90 bp | GGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTGACAAGGAGTTaGATAATCAAAAGATTCATCCCAGGCAGGTCTGTAACAGTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: GLYLRGTGVTRVTRS*IIKRFIPGRSVTVP Trigger: GGGGACTGTTACAGACCTGCCTGGGATGAATCTTTTGATTATCAAACTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | GGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTaGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GPRKHGERRCLL*SCSSQERDPGA Trigger: GGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR GCA 72 bp | AGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTaGTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCG | + |
|
Preference number: 3 (lower is better) Translates to: RKHGERRCLLWS*SSQERDPGARS Trigger: CGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR GCA 72 bp | GCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTaGACTCGCCATCAGCACTCTCCTTCCAGTGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AWELGQEIAPPA*TRHQHSPSSGP Trigger: GGGACCACTGGAAGGAGAGTGCTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR GCA 72 bp | CCTTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATaGTTGCTGTGGTCCTGCTCCTCCCAGGAGCGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PSSGPRKHGERR*LLWSCSSQERD Trigger: GTCCCGCTCCTGGGAGGAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCGAGACCCAGCGGGGCTaGAGGAAAGAGCAGCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: AFSEPTGLCELEAGAEETETQRG*RKEQHL Trigger: AAGGTGCTGCTCTTTCCTCAAGCCCCGCTGGGTCTC...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR GCA 72 bp | GTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTaGAGACCCACGAGGTTACATGTCGCCATTCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VWLTLGRWASGP*RPTRLHVAILH Trigger: ATGGAGAATGGCGACATGTAACCTCGTGGGTCTGCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | TCCCGCCTGCACTCGCCATCAGCACTCTCCTTCCAGTaGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRLHSPSALSFQ*SQEAWRKEMLA Trigger: AGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAGGAGAGTGCTGATGGCGAGTGCAGGCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | CCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTaGGAAGGTGGGCCTCCGGGCCCTGCAGACCCACGA | + |
|
Preference number: 3 (lower is better) Translates to: PSVGLLVLYGLH*EGGPPGPADPR Trigger: TCGTGGGTCTGCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAGAACAGGAAGGAAGAACCGCTCCTCCCTGAGCACCAGCCAGGGAGAAGGCTGGCTTGTGTGAGCTaGAAGCTGGGGCAGAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CKNRKEEPLLPEHQPGRRLACVS*KLGQRR Trigger: TCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAG...CCTTCTCCCTGGCTGGTGCTCAGGGAGGAGCGGTTCTTCCTTCCTGTTCTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | CCATCAGCACTCTCCTTCCAGTGGTCCCAGGAAGCATaGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PSALSFQWSQEA*RKEMLAVVLLL Trigger: GAGGAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAGGAGAGTGCTGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTaGGCCTCCGGGCCCTGCAGACCCACGAGGTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: WVAGFVWLTLGR*ASGPCRPTRLH Trigger: ATGTAACCTCGTGGGTCTGCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | CACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATaGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HLHTFSWVAGFV*LTLGRWASGPC Trigger: GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR GCA 72 bp | TGGCTGGCTGGCTGGCTGGCTGGACACAAGACTTTCTaGACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WLAGWLAGHKTF*TVGVFCRQAWE Trigger: CTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGCCAGCCAGCCAGCCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR GCA 72 bp | AAGCTGCCCGGGCCAACTTTCTGCTCCACTCCCACTTaGACACCTTCAGTTGGGTTGCTGGTTTTGTATGGC | + |
|
Preference number: 3 (lower is better) Translates to: KLPGPTFCSTPT*TPSVGLLVLYG Trigger: GCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCCCGGGCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | GCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTaGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: APLPLAHLQLGC*FCMAYTGKVGL Trigger: GAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTGACAAGGAGGTTCTGCAGACAAGCTaGGGAGCTGGGGCAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LHSWSLPQRNWSYPSDKEVLQTS*GAGAGN Trigger: ATTTCCTGCCCCAGCTCCCAAGCTTGTCTGCAGAAC...CTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGAGACCCAGCGGGGCTaGAGGAAAGAGCAGCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: PTCTPSVGLLVLYGLHWEETQRG*RKEQHL Trigger: AAGGTGCTGCTCTTTCCTCAAGCCCCGCTGGGTCTC...TTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTCCTCTGTCCTTTCTGCCTGCCTaGGACTTGGAGGGAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLCSKNLSERTPVVVPPLSFLPA*DLEGGK Trigger: CTTTCCTCCCTCCAAGTCCAAGGCAGGCAGAAAGGA...CAGAGGAGGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR GCA 72 bp | CCCTCTTCCCAGGTGCAGTTTAGTAGACTTCCTTTCTaGCTGCCTTGGACTTGGAGGGAGGAAAGCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSSQVQFSRLPF*LPWTWREESLE Trigger: CTCCAAGCTTTCCTCCCTCCAAGTCCAAGGCAGGCAGAAAGGAAGTCTACTAAACTGCACCTGGGAAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR GCA 72 bp | TCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTaGTGGTTTTGTATGGCTTACACTGGGAAGGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SAPLPLAHLQLG*WFCMAYTGKVG Trigger: GCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | GTCTACCCCACAAATGCATACTGGATACTGGCTGGCTaGCTGGCTGGCTGGACACAAGACTTTCTGCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: VYPTNAYWILAG*LAGWTQDFLHC Trigger: ACAGTGCAGAAAGTCTTGTGTCCAGCCAGCCAGCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCAGTGAACCCACTGGCTaGTGTGAGCTTGAAGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HSPSLLQEPLREDSCSCASEPTG*CELEAG Trigger: CCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACT...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGAGTGAACCCACTGGCTaGTGTGAGCTTGAAGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IDSPPFLVSTSEELELPESEPTG*CELEAG Trigger: CCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACT...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR TCA 72 bp | CTGCCTTGGACTTGGAGGGAGGAAAGCTTGGAGTATTaGTTCCCCTCCATTCCTGGTCTCTACCTCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPWTWREESLEY*FPSIPGLYLRG Trigger: TCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAATACTCCAAGCTTTCCTCCCTCCAAGTCCAAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR GCA 72 bp | GCTGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTaGAGACAAGCTTGGGAGCTGGGGCAGGAAATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AGHKTFCTVGVF*RQAWELGQEIA Trigger: TGCTATTTCCTGCCCCAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | CTTTCTGCCTGCCTTGGACTTGGAGGGAGGAAAGCTTaGAGTATTGATTCCCCTCCATTCCTGGTCTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: LSACLGLGGRKA*SIDSPPFLVST Trigger: GGTAGAGACCAGGAATGGAGGGGAATCAATACTCCAAGCTTTCCTCCCTCCAAGTCCAAGGCAGGCAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTGGAAAGCTTGGAGTATaGATTCCCCTCCATTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFGKLGV*IPLHSW Trigger: CCAGGAATGGAGGGGAATCAATACTCCAAGCTTTCC...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAATCCTTTCTGCCTGCCTaGGACTTGGAGGGAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PTCTPSVGLLVLYGLHWESFLPA*DLEGGK Trigger: CTTTCCTCCCTCCAAGTCCAAGGCAGGCAGAAAGGA...TTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTCTTCTTTTGTGTTCTGCAGACAAGCTaGGGAGCTGGGGCAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: YRETSLGTGAHLNSFFFCVLQTS*GAGAGN Trigger: ATTTCCTGCCCCAGCTCCCAAGCTTGTCTGCAGAAC...ACAAAAGAAGAAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | GGAGGAAAGCTTGGAGTATTGATTCCCCTCCATTCCTaGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: GGKLGVLIPLHS*SLPQRNWSYPS Trigger: ACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAATACTCCAAGCTTTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | AACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTaGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: NFLLHSHLHTFS*VAGFVWLTLGR Trigger: CCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR CCA 72 bp | ATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTaGAGTTACCCGAGTGACAAGGAGTTTGATAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: IPLHSWSLPQRN*SYPSDKEFDNQ Trigger: TTGATTATCAAACTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGGACCCGCTGCTCTCATaGGGCCTGGCCCGTCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCGPAPPRSGTPGPGRTLDPLLS*GLARRR Trigger: CCTACGACGGGCCAGGCCTCATGAGAGCAGCGGGTC...CAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACTCCCCTGGGTACCACTaGGTCCAGCGAGCGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPRSGTPGPGRTLSHLEHSPGYH*VQRAGS Trigger: CGACCCCGCTCGCTGGACTCAGTGGTACCCAGGGGA...GTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGCTCCTGGTGGCCAGCTaGCTGATGGCCCGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CCGPAPPRSGTPGPGRTLLLVAS*LMARAV Trigger: GACAGCCCGGGCCATCAGCCAGCTGGCCACCAGGAG...CAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACTGGGGTCCGGGCGACTaGAGTCCTGGAAGGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPRSGTPGPGRTLSHLEHWGPGD*SPGRPQ Trigger: TTGGGGCCTTCCAGGACTTCAGTCGCCCGGACCCCA...GTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATGTGGAGCTGCTGCCGTaGATGCCCTGCAGGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GPAPPRSGTPGPGRTLSHVELLP*MPCRLT Trigger: CGTCAGCCTGCAGGGCATCCACGGCAGCAGCTCCAC...ATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATAGCCCCAGGGGCTGCTaGAGCTGCTCAGCAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPAPPRSGTPGPGRTLSHSPRGC*SCSAAD Trigger: ATCAGCTGCTGAGCAGCTGCAGCAGCCCCTGGGGCT...ATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGCTGGGCCAGGCTTCCTaGCATGCCACTGGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CCGPAPPRSGTPGPGRTLLGQAS*HATGTA Trigger: GGCAGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAG...CAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGCAGAGGACAGCCAGCTaGAGCTGGTGGCCACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: CCGPAPPRSGTPGPGRTLQRTAS*SWWPPL Trigger: GAGTGGTGGCCACCAGCTGCAGCTGGCTGTCCTCTG...CAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGGGATCCGGTCTGCTATaGTGGGGGCGGCACCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CCGPAPPRSGTPGPGRTLGSGLL*WGRHLM Trigger: CATCAGGTGCCGCCCCCACCATAGCAGACCGGATCC...CAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACCGTCTACAGCCGGCTTaGTACCTCCTGGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPRSGTPGPGRTLSHLEHRLQPA*YLLVAS Trigger: GCTGGCCACCAGGAGGTACCAAGCCGGCTGTAGACG...GTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATCCATTCGGGCCTTACTaGCCAGTGACAGGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPAPPRSGTPGPGRTLSHPFGPY*PVTGRG Trigger: GCCCCTGCCTGTCACTGGCCAGTAAGGCCCGAATGG...ATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGGGGCTGCTGCAGCTaGTCAGCAGCTGATCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: CCGPAPPRSGTPGPGRTLRGCCS*SAADRS Trigger: GGATCGATCAGCTGCTGAGCAGCTGCAGCAGCCCCT...CAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGGGGGCAAGTCCGATaGTGGTATAGCCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CCGPAPPRSGTPGPGRTLRGQVR*WYSQGS Trigger: GGACCCCTGGCTATACCAGCATCGGACTTGCCCCCT...CAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGCAGCCCCCAGCCCTGTaGATAGGGGTGTGGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: CCGPAPPRSGTPGPGRTLQPPAL*IGVWRY Trigger: GTATCTCCACACCCCTATGCACAGGGCTGGGGGCTG...CAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCATCAGGGTGGGGGCGGCACCTaGTGCGCAGCACTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAWELGQEIAPPACTRHQGGGGT*CAALRP Trigger: TGGCCTCAGTGCTGCGCATCAGGTGCCGCCCCCACC...CTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACGGGCAAGTCCGATGCTaGTATAGCCAGGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PPRSGTPGPGRTLSHLEHGQVRC*YSQGST Trigger: TGTGGACCCCTGGCTATACCAGCATCGGACTTGCCC...GTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATGGTGTGATGAGCTGCTaGTCAGGGAGAGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPAPPRSGTPGPGRTLSHGVMSC*SGRDGS Trigger: GGAGCCATCTCTCCCTGACCAGCAGCTCATCACACC...ATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATCTGAACATCAATGGATaGACCTCTGGGGGCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPAPPRSGTPGPGRTLSHLNING*TSGGQG Trigger: CCCTTGGCCCCCAGAGGTTCATCCATTGATGTTCAG...ATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACCCAGGCTTCCTGCCATaGCACTGGAACTGCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPRSGTPGPGRTLSHLEHPGFLP*HWNCLL Trigger: CAAAAGGCAGTTCCAGTGGCATGGCAGGAAGCCTGG...GTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATTTGGGTGTGATGAGCTaGTGGTCAGGGAGAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPAPPRSGTPGPGRTLSHLGVMS*WSGRDG Trigger: GCCATCTCTCCCTGACCAGCAGCTCATCACACCCAA...ATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGTTGGGTGTGATGAGCTaGTGGTCAGGGAGAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCGPAPPRSGTPGPGRTLLGVMS*WSGRDG Trigger: GCCATCTCTCCCTGACCAGCAGCTCATCACACCCAA...CAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATCAAAGAGTACTGCGTTaGCTCCTCGCTCACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPAPPRSGTPGPGRTLSHQRVLR*LLAHQP Trigger: TGGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTG...ATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACCAAAGAGTACTGCGTTaGCTCCTCGCTCACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPRSGTPGPGRTLSHLEHQRVLR*LLAHQP Trigger: TGGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTG...GTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGCGGGGCCTGGGAAAATaGATCTCCCTCTACGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: CCGPAPPRSGTPGPGRTLRGLGK*ISLYDV Trigger: AACATCGTAGAGGGAGATTCATTTTCCCAGGCCCCG...CAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCATCAGTGGGGTCCGGGCGACTaGAGTCCTGGAAGGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QAWELGQEIAPPACTRHQWGPGD*SPGRPQ Trigger: TTGGGGCCTTCCAGGACTTCAGTCGCCCGGACCCCA...CTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR CAA 72 bp | TCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTaGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGPRKHGERRC*LWSCSSQERDP Trigger: GGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGACCCGCTGCTCTCATaGGGCCTGGCCCGTCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGLLVLYGLHWEGGPPGPDPLLS*GLARRR Trigger: CCTACGACGGGCCAGGCCTCATGAGAGCAGCGGGTC...AGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTCTTTCGGACTCCACTaGCGCCGCCAGCACCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRTLSHLEHTRHRSFISFGLH*RRQHPS Trigger: GGACGGGTGCTGGCGGCGGCAGTGGAGTCCGAAAGA...GATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCTCCGGTCTGCTATGGTaGGGGCGGCACCTGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WVAGFVWLTLGRWASGPCSGLLW*GRHLMR Trigger: GCGCATCAGGTGCCGCCCCCACCATAGCAGACCGGA...GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCATCAGGGATCCGGTCTGCTATaGTGGGGGCGGCACCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QAWELGQEIAPPACTRHQGSGLL*WGRHLM Trigger: CATCAGGTGCCGCCCCCACCATAGCAGACCGGATCC...CTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCCTCCTGGTGGCCAGCTaGCTGATGGCCCGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AFSEPTGLCELEAGAEETLLVAS*LMARAV Trigger: GACAGCCCGGGCCATCAGCCAGCTGGCCACCAGGAG...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATTCACTGGATGAGCCGTaGCAGGGCCCTGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GARSNPEPSGAHSPSKLHSLDEP*QGPELE Trigger: CTCCAGCTCAGGGCCCTGTCACGGCTCATCCAGTGA...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCAGCCCCAGGGGCTGCTaGAGCTGCTCAGCAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WVAGFVWLTLGRWASGPCSPRGC*SCSAAD Trigger: ATCAGCTGCTGAGCAGCTGCAGCAGCCCCTGGGGCT...GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCGATGCCGAGAGCCCATaGTTGGCTCCTGGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WVAGFVWLTLGRWASGPCDAESP*LAPGRA Trigger: TGCCCTCCCAGGAGCCAAGCATGGGCTCTCGGCATC...GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCCTGGGCCAGGCTTCCTaGCATGCCACTGGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRTLSHLEHTRHRSFILGQAS*HATGTA Trigger: GGCAGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAG...GATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTGGGCCAGGCTTCCTaGCATGCCACTGGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GARSNPEPSGAHSPSKLHLGQAS*HATGTA Trigger: GGCAGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAG...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCCAGAGGACAGCCAGCTaGAGCTGGTGGCCACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: WVAGFVWLTLGRWASGPCQRTAS*SWWPPL Trigger: GAGTGGTGGCCACCAGCTGCAGCTGGCTGTCCTCTG...GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCGGATCCGGTCTGCTATaGTGGGGGCGGCACCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: WVAGFVWLTLGRWASGPCGSGLL*WGRHLM Trigger: CATCAGGTGCCGCCCCCACCATAGCAGACCGGATCC...GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCGTCTACAGCCGGCTTaGTACCTCCTGGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GARSNPEPSGAHSPSKLHRLQPA*YLLVAS Trigger: GCTGGCCACCAGGAGGTACCAAGCCGGCTGTAGACG...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCATCAGTCTTCCGAGCCAGGTTaGGCTGGCAGCACCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QAWELGQEIAPPACTRHQSSEPG*AGSTWQ Trigger: TTGCCAGGTGCTGCCAGCCCAACCTGGCTCGGAAGA...CTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCTGGGGTCCGGGCGACTaGAGTCCTGGAAGGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLWGPGD*SPGRPQ Trigger: TTGGGGCCTTCCAGGACTTCAGTCGCCCGGACCCCA...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCTCACTGGATGAGCCGTaGCAGGGCCCTGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFSEPTGLCELEAGAEETSLDEP*QGPELE Trigger: CTCCAGCTCAGGGCCCTGTCACGGCTCATCCAGTGA...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGCGGCCTTACTGGCCAGTaGCAGGCAGGGGCGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLEESTPQMHTGYWLAGGLTGQ*QAGARS Trigger: GCTCCTCGCCCCTGCCTGTCACTGGCCAGTAAGGCC...GCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTGACCGTCAGCCCCAGGGGCTaGTGCAGCTGCTCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSNPEPSGAHSPSKLHLTVSPRG*CSCSAA Trigger: AGCTGCTGAGCAGCTGCAGCAGCCCCTGGGGCTGAC...GGTCAGATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCGTCAGCCCCAGGGGCTaGTGCAGCTGCTCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLVSPRG*CSCSAA Trigger: AGCTGCTGAGCAGCTGCAGCAGCCCCTGGGGCTGAC...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCAGGGGGCAAGTCCGATaGTGGTATAGCCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WVAGFVWLTLGRWASGPCRGQVR*WYSQGS Trigger: GGACCCCTGGCTATACCAGCATCGGACTTGCCCCCT...GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATTGGGCGTGGCCAGGATaGTGGCGAATGAGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GARSNPEPSGAHSPSKLHWAWPG*WRMRWS Trigger: ACTCCACCTCATTCGCCAGCATCCTGGCCACGCCCA...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCGCCTGCGTGCAGGGTTaGCATCAGCAGCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLACVQG*HQQPGP Trigger: TGGCCCTGGCTGCTGATGGCAACCCTGCACGCAGGC...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTGCCTGCGTGCAGGGTTaGCATCAGCAGCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVVPGSMAKGDACCGPAACVQG*HQQPGP Trigger: TGGCCCTGGCTGCTGATGGCAACCCTGCACGCAGGC...AGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCTCCGGTCTGCTATGGTaGGGGCGGCACCTGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLSGLLW*GRHLMR Trigger: GCGCATCAGGTGCCGCCCCCACCATAGCAGACCGGA...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCCAGCTGCTCAGCAGCTaGTCGATCCTCGGTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRTLSHLEHTRHRSFIQLLSS*SILGDV Trigger: GACATCACCGAGGATCGATCAGCTGCTGAGCAGCTG...GATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCAGCTGCTCAGCAGCTaGTCGATCCTCGGTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GARSNPEPSGAHSPSKLHQLLSS*SILGDV Trigger: GACATCACCGAGGATCGATCAGCTGCTGAGCAGCTG...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGGGTGGGGGCGGCACCTaGTGCGCAGCACTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDSPPFLVSTSEELELPEGGGGT*CAALRP Trigger: TGGCCTCAGTGCTGCGCATCAGGTGCCGCCCCCACC...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | ATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCATTTTGCCCCGGTGGGGGCGGCACCTaGTGCGCAGCACTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDSEERRFPRRIPCPFCPGGGGT*CAALRP Trigger: TGGCCTCAGTGCTGCGCATCAGGTGCCGCCCCCACC...GGGGCAAAATGGACATGGGATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCAGGATGCTGGCGAATaGGGTGGAGTCTTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GARSNPEPSGAHSPSKLHQDAGE*GGVFCL Trigger: CAGGCAGAAGACTCCACCTCATTCGCCAGCATCCTG...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTTCCCCTGGGTACCACTaGGTCCAGCGAGCGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFSPGYH*VQRAGS Trigger: CGACCCCGCTCGCTGGACTCAGTGGTACCCAGGGGA...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | CATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTCCTCTGGGCCTTACTGGCCAGTaGCAGGCAGGGGCGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLCSKNLSERTPVVVPPLGLTGQ*QAGARS Trigger: GCTCCTCGCCCCTGCCTGTCACTGGCCAGTAAGGCC...CAGAGGAGGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTAGCCCCAGGGGCTGCTaGAGCTGCTCAGCAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPVVPGSMAKGDACCGPASPRGC*SCSAAD Trigger: ATCAGCTGCTGAGCAGCTGCAGCAGCCCCTGGGGCT...AGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCGATACCGCCAAGTGCTaGTGTTCTTCTGGGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AFSEPTGLCELEAGAEETDTAKC*CSSGAR Trigger: CCGGGCCCCAGAAGAACAGCAGCACTTGGCGGTATC...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGCTCTTTCGGACTCCACTaGCGCCGCCAGCACCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLEESTPQMHTGYWLAGSFGLH*RRQHPS Trigger: GGACGGGTGCTGGCGGCGGCAGTGGAGTCCGAAAGA...GCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCCGTCATCACTGGCGTTaGACAGGTACAGGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFSEPTGLCELEAGAEETRHHWR*TGTGGG Trigger: CCCACCCCCTGTACCTGTGCAACGCCAGTGATGACG...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCCGTCTACAGCCGGCTTaGTACCTCCTGGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLRLQPA*YLLVAS Trigger: GCTGGCCACCAGGAGGTACCAAGCCGGCTGTAGACG...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCCCATGCTTGGCTCCTaGGAGGGCAGAAAGGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GARSNPEPSGAHSPSKLHPMLGS*EGRKGL Trigger: TAGACCCTTTCTGCCCTCCCAGGAGCCAAGCATGGG...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCCCCATGCTTGGCTCCTaGGAGGGCAGAAAGGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GPGRTLSHLEHTRHRSFIPMLGS*EGRKGL Trigger: TAGACCCTTTCTGCCCTCCCAGGAGCCAAGCATGGG...GATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCGGAGATGTGAAGTCCTaGGAAGGCGCTGATGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: WVAGFVWLTLGRWASGPCGDVKS*EGADAE Trigger: CTCGGCATCAGCGCCTTCCCAGGACTTCACATCTCC...GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGCGTGGAGCTGCTGCCGTaGATGCCCTGCAGGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LSLEESTPQMHTGYWLAGVELLP*MPCRLT Trigger: CGTCAGCCTGCAGGGCATCCACGGCAGCAGCTCCAC...GCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCGGTGTGATGAGCTGCTaGTCAGGGAGAGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRTLSHLEHTRHRSFIGVMSC*SGRDGS Trigger: GGAGCCATCTCTCCCTGACCAGCAGCTCATCACACC...GATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | CCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGGGCGGCACCTaGTGCGCAGCACTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTCTPSVGLLVLYGLHWEGGGGT*CAALRP Trigger: TGGCCTCAGTGCTGCGCATCAGGTGCCGCCCCCACC...TTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTCCCTCTACGATGTTaGACATGCAGAGGGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GARSNPEPSGAHSPSKLHLPLRC*TCRGGK Trigger: CTTGCCCCCTCTGCATGTTCAACATCGTAGAGGGAG...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTCCCCTGGGTACCACTaGGTCCAGCGAGCGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IDSPPFLVSTSEELELPESPGYH*VQRAGS Trigger: CGACCCCGCTCGCTGGACTCAGTGGTACCCAGGGGA...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGTCCCCTGGGTACCACTaGGTCCAGCGAGCGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GHKTFCTVGVFCRQAWELSPGYH*VQRAGS Trigger: CGACCCCGCTCGCTGGACTCAGTGGTACCCAGGGGA...CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCATCAGGATGTCAAAGAGTACTaGGTTGGCTCCTCGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: QAWELGQEIAPPACTRHQDVKEY*VGSSLT Trigger: GGTGAGCGAGGAGCCAACGCAGTACTCTTTGACATC...CTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTCCTCTGGTCAGCCCCAGGGGCTaGTGCAGCTGCTCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLCSKNLSERTPVVVPPLVSPRG*CSCSAA Trigger: AGCTGCTGAGCAGCTGCAGCAGCCCCTGGGGCTGAC...CAGAGGAGGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGTAAGAACAGGAAGGAAGAACCGCTCCTCCCTGAGCACCAGCCAGGGAGAAGGTGGGCGTGGCCAGGATaGTGGCGAATGAGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CKNRKEEPLLPEHQPGRRWAWPG*WRMRWS Trigger: ACTCCACCTCATTCGCCAGCATCCTGGCCACGCCCA...CCTTCTCCCTGGCTGGTGCTCAGGGAGGAGCGGTTCTTCCTTCCTGTTCTTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGTAAGAACAGGAAGGAAGAACCGCTCCTCCCTGAGCACCAGCCAGGGAGAAGGCAGCCCCCAGCCCTGTaGATAGGGGTGTGGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: CKNRKEEPLLPEHQPGRRQPPAL*IGVWRY Trigger: GTATCTCCACACCCCTATGCACAGGGCTGGGGGCTG...CCTTCTCCCTGGCTGGTGCTCAGGGAGGAGCGGTTCTTCCTTCCTGTTCTTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTGACCCAGCCCCCAGCCCTGTaGATAGGGGTGTGGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: RSNPEPSGAHSPSKLHLTQPPAL*IGVWRY Trigger: GTATCTCCACACCCCTATGCACAGGGCTGGGGGCTG...GGTCAGATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCACTGGCTGGCCCATCTaGCAAGTAACCGCTGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFSEPTGLCELEAGAEETTGWPI*QVTAAF Trigger: GAACGCAGCGGTTACTTGGCAGATGGGCCAGCCAGT...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | CAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCATCAGTGCTGGAGTCACTTCTaGAACACCAGCAAACACGCC | + |
|
Preference number: 4 (lower is better) Translates to: QAWELGQEIAPPACTRHQCWSHF*NTSKHA Trigger: GGCGTGTTTGCTGGTGTTGCAGAAGTGACTCCAGCA...CTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGCTCCTGGTGGCCAGCTaGCTGATGGCCCGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IDSPPFLVSTSEELELPELLVAS*LMARAV Trigger: GACAGCCCGGGCCATCAGCCAGCTGGCCACCAGGAG...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCGTCTACAGCCGGCTTaGTACCTCCTGGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDASLPIDSEERRFPRRIRLQPA*YLLVAS Trigger: GCTGGCCACCAGGAGGTACCAAGCCGGCTGTAGACG...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | AGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTGACCTGGTTCCTGGTAAGATaGAGAGGCTGCCGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSNPEPSGAHSPSKLHLTWFLVR*RGCRGL Trigger: CAGGCCCCGGCAGCCTCTCCATCTTACCAGGAACCA...GGTCAGATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGGAGATGTGAAGTCCTaGGAAGGCGCTGATGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGLLVLYGLHWEGGPPGPGDVKS*EGADAE Trigger: CTCGGCATCAGCGCCTTCCCAGGACTTCACATCTCC...AGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTGTGGAGCTGCTGCCGTaGATGCCCTGCAGGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFVELLP*MPCRLT Trigger: CGTCAGCCTGCAGGGCATCCACGGCAGCAGCTCCAC...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCCAATGGATGAACCTCTaGGGGCCAAGGGTATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WVAGFVWLTLGRWASGPCQWMNL*GPRVCQ Trigger: CTGGCATACCCTTGGCCCCCAGAGGTTCATCCATTG...GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCGGGGCCTGGGAAAATaGATCTCCCTCTACGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GARSNPEPSGAHSPSKLHRGLGK*ISLYDV Trigger: AACATCGTAGAGGGAGATTCATTTTCCCAGGCCCCG...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR TCA 90 bp | CTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTGACAAGGAGTCACTGGATGAGCCGTaGCAGGGCCCTGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHSWSLPQRNWSYPSDKESLDEP*QGPELE Trigger: CTCCAGCTCAGGGCCCTGTCACGGCTCATCCAGTGA...CTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCTGGGTTGGGAAGCATTaGAGAAGCTGTTGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVAGFVWLTLGRWASGPCWVGKH*RSCWVG Trigger: CCCAACCCAACAGCTTCTTCAATGCTTCCCAACCCA...GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCCAGCACCTGGCAATGTaGGTAAGGACATCTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AFSEPTGLCELEAGAEETQHLAM*VRTSPA Trigger: GGCAGGAGATGTCCTTACTCACATTGCCAGGTGCTG...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAAGGTACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTAGCCCCAGGGGCTGCTaGAGCTGCTCAGCAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: REKVQRDLSWDWGSPKLLSPRGC*SCSAAD Trigger: ATCAGCTGCTGAGCAGCTGCAGCAGCCCCTGGGGCT...AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTACCTTCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAAGGTACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTGATGCCGAGAGCCCATaGTTGGCTCCTGGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: REKVQRDLSWDWGSPKLLDAESP*LAPGRA Trigger: TGCCCTCCCAGGAGCCAAGCATGGGCTCTCGGCATC...AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTACCTTCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCGATACCGCCAAGTGCTaGTGTTCTTCTGGGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LDASLPIDSEERRFPRRIDTAKC*CSSGAR Trigger: CCGGGCCCCAGAAGAACAGCAGCACTTGGCGGTATC...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCACTGGCTGGCCCATCTaGCAAGTAACCGCTGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLTGWPI*QVTAAF Trigger: GAACGCAGCGGTTACTTGGCAGATGGGCCAGCCAGT...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGGCCTGCGTGCAGGGTTaGCATCAGCAGCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDSPPFLVSTSEELELPEACVQG*HQQPGP Trigger: TGGCCCTGGCTGCTGATGGCAACCCTGCACGCAGGC...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATTGCTGGAGTCACTTCTaGAACACCAGCAAACACGCC | + |
|
Preference number: 4 (lower is better) Translates to: GARSNPEPSGAHSPSKLHCWSHF*NTSKHA Trigger: GGCGTGTTTGCTGGTGTTGCAGAAGTGACTCCAGCA...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCCAAAGAGTACTGCGTTaGCTCCTCGCTCACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFSEPTGLCELEAGAEETQRVLR*LLAHQP Trigger: TGGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTG...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGTCCGGTCTGCTATGGTaGGGGCGGCACCTGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGHKTFCTVGVFCRQAWESGLLW*GRHLMR Trigger: GCGCATCAGGTGCCGCCCCCACCATAGCAGACCGGA...CTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAAGGTACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTGGATCCGGTCTGCTATaGTGGGGGCGGCACCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: REKVQRDLSWDWGSPKLLGSGLL*WGRHLM Trigger: CATCAGGTGCCGCCCCCACCATAGCAGACCGGATCC...AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTACCTTCTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTGGGCAAGTCCGATGCTaGTATAGCCAGGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPVVPGSMAKGDACCGPAGQVRC*YSQGST Trigger: TGTGGACCCCTGGCTATACCAGCATCGGACTTGCCC...AGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TGTAAGAACAGGAAGGAAGAACCGCTCCTCCCTGAGCACCAGCCAGGGAGAAGGGGGCAAGTCCGATGCTaGTATAGCCAGGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CKNRKEEPLLPEHQPGRRGQVRC*YSQGST Trigger: TGTGGACCCCTGGCTATACCAGCATCGGACTTGCCC...CCTTCTCCCTGGCTGGTGCTCAGGGAGGAGCGGTTCTTCCTTCCTGTTCTTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTGACCGAGGCTGCCGGGGCCTaGGAAAATGAATCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSNPEPSGAHSPSKLHLTEAAGA*ENESPS Trigger: AGAGGGAGATTCATTTTCCCAGGCCCCGGCAGCCTC...GGTCAGATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TGTAAGAACAGGAAGGAAGAACCGCTCCTCCCTGAGCACCAGCCAGGGAGAAGGGAGGCTGCCGGGGCCTaGGAAAATGAATCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CKNRKEEPLLPEHQPGRREAAGA*ENESPS Trigger: AGAGGGAGATTCATTTTCCCAGGCCCCGGCAGCCTC...CCTTCTCCCTGGCTGGTGCTCAGGGAGGAGCGGTTCTTCCTTCCTGTTCTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCGCGTGGCCAGGATGCTaGCGAATGAGGTGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLAWPGC*RMRWSL Trigger: AAGACTCCACCTCATTCGCCAGCATCCTGGCCACGC...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTGGAGATGTGAAGTCCTaGGAAGGCGCTGATGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPVVPGSMAKGDACCGPAGDVKS*EGADAE Trigger: CTCGGCATCAGCGCCTTCCCAGGACTTCACATCTCC...AGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLLSWSH*LAHLPS Trigger: ACTTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAG...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTGACCTGGGATCCCAGTTTCTaGGCCAGGCTTCCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RSNPEPSGAHSPSKLHLTWDPSF*ARLPAM Trigger: CATGGCAGGAAGCCTGGCCCAGAAACTGGGATCCCA...GGTCAGATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR CAA 72 bp | GTGAGACGTGATCTCGCCTTCAGTGAACCCACTGGCTaGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRRDLAFSEPTG*CELEAGAEETQ Trigger: CTGGGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGCGAGATCACGTCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCCTCCCTCTACGATGTTaGACATGCAGAGGGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLLPLRC*TCRGGK Trigger: CTTGCCCCCTCTGCATGTTCAACATCGTAGAGGGAG...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCGACCCGCTGCTCTCATaGGGCCTGGCCCGTCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGDPLLS*GLARRR Trigger: CCTACGACGGGCCAGGCCTCATGAGAGCAGCGGGTC...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCTGGGTTGGGAAGCATTaGAGAAGCTGTTGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFSEPTGLCELEAGAEETWVGKH*RSCWVG Trigger: CCCAACCCAACAGCTTCTTCAATGCTTCCCAACCCA...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAAGGTACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTTGGGCGTGGCCAGGATaGTGGCGAATGAGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: REKVQRDLSWDWGSPKLLWAWPG*WRMRWS Trigger: ACTCCACCTCATTCGCCAGCATCCTGGCCACGCCCA...AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTACCTTCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGTAAGAACAGGAAGGAAGAACCGCTCCTCCCTGAGCACCAGCCAGGGAGAAGGAGGGGTCAAAGTCACTaGTCAGGGAGCTTCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CKNRKEEPLLPEHQPGRRRGQSH*SGSFGR Trigger: CCTTCCGAAGCTCCCTGAGCAGTGACTTTGACCCCT...CCTTCTCCCTGGCTGGTGCTCAGGGAGGAGCGGTTCTTCCTTCCTGTTCTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCAGGGGTCAAAGTCACTaGTCAGGGAGCTTCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLRGQSH*SGSFGR Trigger: CCTTCCGAAGCTCCCTGAGCAGTGACTTTGACCCCT...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCCAGGCTTCCTGCCATaGCACTGGAACTGCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVVPGSMAKGDACCGPAPGFLP*HWNCLL Trigger: CAAAAGGCAGTTCCAGTGGCATGGCAGGAAGCCTGG...AGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCCTGGGCCAGGCTTCCTaGCATGCCACTGGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSPSLLQEPLREDSCSCALGQAS*HATGTA Trigger: GGCAGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAG...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCATCAGGTGAGGCTGGATTTCTaGAAGTTCAAAAGACCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAWELGQEIAPPACTRHQVRLDF*KFKRPL Trigger: CAGCGGTCTTTTGAACTTGCAGAAATCCAGCCTCAC...CTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | ATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCATTTTGCCCCCAGAGGACAGCCAGCTaGAGCTGGTGGCCACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: IDSEERRFPRRIPCPFCPQRTAS*SWWPPL Trigger: GAGTGGTGGCCACCAGCTGCAGCTGGCTGTCCTCTG...GGGGCAAAATGGACATGGGATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCTGCTGGAGTCACTTCTaGAACACCAGCAAACACGCC | + |
|
Preference number: 4 (lower is better) Translates to: AFSEPTGLCELEAGAEETCWSHF*NTSKHA Trigger: GGCGTGTTTGCTGGTGTTGCAGAAGTGACTCCAGCA...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTCGTCATCACTGGCGTTaGACAGGTACAGGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFRHHWR*TGTGGG Trigger: CCCACCCCCTGTACCTGTGCAACGCCAGTGATGACG...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTTCCGGTCTGCTATGGTaGGGGCGGCACCTGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WTQDFLHCRCVLQTSLGASGLLW*GRHLMR Trigger: GCGCATCAGGTGCCGCCCCCACCATAGCAGACCGGA...AGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGCGAGGCTGCCGGGGCCTaGGAAAATGAATCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLEESTPQMHTGYWLAGEAAGA*ENESPS Trigger: AGAGGGAGATTCATTTTCCCAGGCCCCGGCAGCCTC...GCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGCGCGTGGCCAGGATGCTaGCGAATGAGGTGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLEESTPQMHTGYWLAGAWPGC*RMRWSL Trigger: AAGACTCCACCTCATTCGCCAGCATCCTGGCCACGC...GCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCGGAGATGTGAAGTCCTaGGAAGGCGCTGATGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDASLPIDSEERRFPRRIGDVKS*EGADAE Trigger: CTCGGCATCAGCGCCTTCCCAGGACTTCACATCTCC...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LDASLPIDSEERRFPRRILSWSH*LAHLPS Trigger: ACTTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAG...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGCTGGGATCCCAGTTTCTaGGCCAGGCTTCCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSLEESTPQMHTGYWLAGWDPSF*ARLPAM Trigger: CATGGCAGGAAGCCTGGCCCAGAAACTGGGATCCCA...GCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCACATCTCCTGCCCTCTaGGCTGTCAAAAGTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GPGRTLSHLEHTRHRSFITSPAL*AVKSPL Trigger: AAGTGGACTTTTGACAGCCCAGAGGGCAGGAGATGT...GATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGCCATTCGGGCCTTACTaGCCAGTGACAGGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHKTFCTVGVFCRQAWELPFGPY*PVTGRG Trigger: GCCCCTGCCTGTCACTGGCCAGTAAGGCCCGAATGG...CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| 3UTR CAA 72 bp | ACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTaGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPTCTPSVGLLV*YGLHWEGGPPG Trigger: GCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGAAGGTACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTCAGGATGCTGGCGAATaGGGTGGAGTCTTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: REKVQRDLSWDWGSPKLLQDAGE*GGVFCL Trigger: CAGGCAGAAGACTCCACCTCATTCGCCAGCATCCTG...AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTACCTTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTCAGGATGCTGGCGAATaGGGTGGAGTCTTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFQDAGE*GGVFCL Trigger: CAGGCAGAAGACTCCACCTCATTCGCCAGCATCCTG...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | TGTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGGACCCGCTGCTCTCATaGGGCCTGGCCCGTCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CQKLSLEESTPQMHTGYWDPLLS*GLARRR Trigger: CCTACGACGGGCCAGGCCTCATGAGAGCAGCGGGTC...CCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCTGAACATCAATGGATaGACCTCTGGGGGCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDASLPIDSEERRFPRRILNING*TSGGQG Trigger: CCCTTGGCCCCCAGAGGTTCATCCATTGATGTTCAG...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGAGGGGGCAAGTCCGATaGTGGTATAGCCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGHKTFCTVGVFCRQAWERGQVR*WYSQGS Trigger: GGACCCCTGGCTATACCAGCATCGGACTTGCCCCCT...CTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | ATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCATTTTGCCCCAGGGGGCAAGTCCGATaGTGGTATAGCCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IDSEERRFPRRIPCPFCPRGQVR*WYSQGS Trigger: GGACCCCTGGCTATACCAGCATCGGACTTGCCCCCT...GGGGCAAAATGGACATGGGATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGATGCCGAGAGCCCATaGTTGGCTCCTGGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WTQDFLHCRCVLQTSLGADAESP*LAPGRA Trigger: TGCCCTCCCAGGAGCCAAGCATGGGCTCTCGGCATC...AGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTCCTCTGGGAGATACCGCCAAGTaGTGCTGTTCTTCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLCSKNLSERTPVVVPPLGDTAK*CCSSGA Trigger: GGCCCCAGAAGAACAGCAGCACTTGGCGGTATCTCC...CAGAGGAGGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCTTGGGTGTGATGAGCTaGTGGTCAGGGAGAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDASLPIDSEERRFPRRILGVMS*WSGRDG Trigger: GCCATCTCTCCCTGACCAGCAGCTCATCACACCCAA...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTCTTTCGGACTCCACTaGCGCCGCCAGCACCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGSFGLH*RRQHPS Trigger: GGACGGGTGCTGGCGGCGGCAGTGGAGTCCGAAAGA...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCCCAGATCAGCACCACTaGCTTAGTCAGCCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSPSLLQEPLREDSCSCAPDQHH*LSQPQG Trigger: CCCCTGGGGCTGACTAAGCCAGTGGTGCTGATCTGG...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGTGGTTCCTGGTAAGATaGAGAGGCTGCCGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGHKTFCTVGVFCRQAWEWFLVR*RGCRGL Trigger: CAGGCCCCGGCAGCCTCTCCATCTTACCAGGAACCA...CTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTGCGTGGCCAGGATGCTaGCGAATGAGGTGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFAWPGC*RMRWSL Trigger: AAGACTCCACCTCATTCGCCAGCATCCTGGCCACGC...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAAGGTACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTGCTGGAGTCACTGGCTaGCCCATCTGCCAAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: REKVQRDLSWDWGSPKLLAGVTG*PICQVT Trigger: GGTTACTTGGCAGATGGGCCAGCCAGTGACTCCAGC...AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTACCTTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFLSWSH*LAHLPS Trigger: ACTTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAG...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGTGGAGCTGCTGCCGTaGATGCCCTGCAGGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: QKLSLEESTPQMHTGYWLVELLP*MPCRLT Trigger: CGTCAGCCTGCAGGGCATCCACGGCAGCAGCTCCAC...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | GGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGTCTTCCGAGCCAGGTTaGGCTGGCAGCACCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GHKTFCTVGVFCRQAWELSSEPG*AGSTWQ Trigger: TTGCCAGGTGCTGCCAGCCCAACCTGGCTCGGAAGA...CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR CAA 72 bp | CAAGCTGCCCGGGCCAACTTTCTGCTCCACTCCCACTaGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: QAARANFLLHSH*HTFSWVAGFVW Trigger: CCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCCCGGGCAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR TCA 90 bp | CCACGAGGTTACATGTCGCCATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGACAGCTGCTCAGCAGCTaGTCGATCCTCGGTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRGYMSPFSISAPRTSQRQLLSS*SILGDV Trigger: GACATCACCGAGGATCGATCAGCTGCTGAGCAGCTG...TCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATGGCGACATGTAACCTCGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR TCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGCAGCTGCTCAGCAGCTaGTCGATCCTCGGTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: IDSPPFLVSTSEELELPEQLLSS*SILGDV Trigger: GACATCACCGAGGATCGATCAGCTGCTGAGCAGCTG...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | CTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTGACAAGGAGCTCCCTCTACGATGTTaGACATGCAGAGGGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHSWSLPQRNWSYPSDKELPLRC*TCRGGK Trigger: CTTGCCCCCTCTGCATGTTCAACATCGTAGAGGGAG...CTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR TCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCCAGGATGCTGGCGAATaGGGTGGAGTCTTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSPSLLQEPLREDSCSCAQDAGE*GGVFCL Trigger: CAGGCAGAAGACTCCACCTCATTCGCCAGCATCCTG...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTCTGAACATCAATGGATaGACCTCTGGGGGCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFLNING*TSGGQG Trigger: CCCTTGGCCCCCAGAGGTTCATCCATTGATGTTCAG...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | CTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGCGATGTCAAAGAGTACTaGGTTGGCTCCTCGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSLEESTPQMHTGYWLAGDVKEY*VGSSLT Trigger: GGTGAGCGAGGAGCCAACGCAGTACTCTTTGACATC...GCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAAGGGGCTGCTGCAGCTaGTCAGCAGCTGATCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PTCTPSVGLLVLYGLHWERGCCS*SAADRS Trigger: GGATCGATCAGCTGCTGAGCAGCTGCAGCAGCCCCT...TTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | CTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTGACAAGGAGATGACCCGGAGCTCCTaGCCCTCTGAGAACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHSWSLPQRNWSYPSDKEMTRSS*PSENSS Trigger: AGAAGAGTTCTCAGAGGGGCAGGAGCTCCGGGTCAT...CTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | CTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTGACAAGGAGAGGGGTCAAAGTCACTaGTCAGGGAGCTTCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHSWSLPQRNWSYPSDKERGQSH*SGSFGR Trigger: CCTTCCGAAGCTCCCTGAGCAGTGACTTTGACCCCT...CTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | GTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGTGAGGCTGGATTTCTaGAAGTTCAAAAGACCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLLVLYGLHWEGGPPGPVRLDF*KFKRPL Trigger: CAGCGGTCTTTTGAACTTGCAGAAATCCAGCCTCAC...AGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | AGGGAGAAGGTACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTCAAAGAGTACTGCGTTaGCTCCTCGCTCACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: REKVQRDLSWDWGSPKLLQRVLR*LLAHQP Trigger: TGGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTG...AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTACCTTCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | AGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTGACCGTGGAGTCTTCTGCCTaGTTCCTGGTAAGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSNPEPSGAHSPSKLHLTVESSA*FLVRWR Trigger: TCTCCATCTTACCAGGAACCAGGCAGAAGACTCCAC...GGTCAGATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTGTGGAGTCTTCTGCCTaGTTCCTGGTAAGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPVVPGSMAKGDACCGPAVESSA*FLVRWR Trigger: TCTCCATCTTACCAGGAACCAGGCAGAAGACTCCAC...AGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | TGTAAGAACAGGAAGGAAGAACCGCTCCTCCCTGAGCACCAGCCAGGGAGAAGGGTGGAGTCTTCTGCCTaGTTCCTGGTAAGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CKNRKEEPLLPEHQPGRRVESSA*FLVRWR Trigger: TCTCCATCTTACCAGGAACCAGGCAGAAGACTCCAC...CCTTCTCCCTGGCTGGTGCTCAGGGAGGAGCGGTTCTTCCTTCCTGTTCTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCGCGTGGCCAGGATGCTaGCGAATGAGGTGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSPSLLQEPLREDSCSCAAWPGC*RMRWSL Trigger: AAGACTCCACCTCATTCGCCAGCATCCTGGCCACGC...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCCCCATGCTTGGCTCCTaGGAGGGCAGAAAGGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HSPSLLQEPLREDSCSCAPMLGS*EGRKGL Trigger: TAGACCCTTTCTGCCCTCCCAGGAGCCAAGCATGGG...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGGCTGGAGTCACTGGCTaGCCCATCTGCCAAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: IDSPPFLVSTSEELELPEAGVTG*PICQVT Trigger: GGTTACTTGGCAGATGGGCCAGCCAGTGACTCCAGC...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CCACGAGGTTACATGTCGCCATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGATGGGATCCCAGTTTCTaGGCCAGGCTTCCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PRGYMSPFSISAPRTSQRWDPSF*ARLPAM Trigger: CATGGCAGGAAGCCTGGCCCAGAAACTGGGATCCCA...TCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATGGCGACATGTAACCTCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGCGAGAAGCAGCAGGCATaGACTGTGGGATCCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLEESTPQMHTGYWLAGEKQQA*TVGSQF Trigger: AAACTGGGATCCCACAGTCCATGCCTGCTGCTTCTC...GCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCGGTGTGATGAGCTGCTaGTCAGGGAGAGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSPSLLQEPLREDSCSCAGVMSC*SGRDGS Trigger: GGAGCCATCTCTCCCTGACCAGCAGCTCATCACACC...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTACATCTCCTGCCCTCTaGGCTGTCAAAAGTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LPVVPGSMAKGDACCGPATSPAL*AVKSPL Trigger: AAGTGGACTTTTGACAGCCCAGAGGGCAGGAGATGT...AGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| 3UTR CAA 72 bp | GGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCATTTaGCCCCCACCTTCACATTGCAGGCAAGGATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GEKVPKEDPMSI*PPPSHCRQGYC Trigger: GCAGTATCCTTGCCTGCAATGTGAAGGTGGGGGCAAAATGGACATGGGATCCTCCTTGGGAACCTTCTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR TCA 90 bp | CCACGAGGTTACATGTCGCCATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGACCTGATGCGCAGCACTaGGGCCAGGATGATCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRGYMSPFSISAPRTSQRPDAQH*GQDDHK Trigger: TTTGTGATCATCCTGGCCTCAGTGCTGCGCATCAGG...TCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATGGCGACATGTAACCTCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR TCA 90 bp | GCTGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCAGCACCTGGCAATGTaGGTAAGGACATCTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGHKTFCTVGVFCRQAWEQHLAM*VRTSPA Trigger: GGCAGGAGATGTCCTTACTCACATTGCCAGGTGCTG...CTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGATGACCCGGAGCTCCTaGCCCTCTGAGAACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IDSPPFLVSTSEELELPEMTRSS*PSENSS Trigger: AGAAGAGTTCTCAGAGGGGCAGGAGCTCCGGGTCAT...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | TGTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGGATGCCGAGAGCCCATaGTTGGCTCCTGGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CQKLSLEESTPQMHTGYWDAESP*LAPGRA Trigger: TGCCCTCCCAGGAGCCAAGCATGGGCTCTCGGCATC...CCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | TACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTCTTCTTTTGTGATACCGCCAAGTGCTaGTGTTCTTCTGGGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: YRETSLGTGAHLNSFFFCDTAKC*CSSGAR Trigger: CCGGGCCCCAGAAGAACAGCAGCACTTGGCGGTATC...ACAAAAGAAGAAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCCAGCCCCCAGCCCTGTaGATAGGGGTGTGGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGQPPAL*IGVWRY Trigger: GTATCTCCACACCCCTATGCACAGGGCTGGGGGCTG...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCAGTAAGGACATCTCCTaGCCTCTGGGCTGTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDASLPIDSEERRFPRRISKDIS*PLGCQK Trigger: CTTTTGACAGCCCAGAGGGCAGGAGATGTCCTTACT...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTCTTCTTTTGTTGGTTCCTGGTAAGATaGAGAGGCTGCCGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YRETSLGTGAHLNSFFFCWFLVR*RGCRGL Trigger: CAGGCCCCGGCAGCCTCTCCATCTTACCAGGAACCA...ACAAAAGAAGAAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTGCTGGCGAATGAGGTaGAGTCTTCTGCCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSPSLLQEPLREDSCSCACWRMR*SLLPGS Trigger: GGAACCAGGCAGAAGACTCCACCTCATTCGCCAGCA...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | CCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGCTGGAGTCACTGGCTaGCCCATCTGCCAAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: PTCTPSVGLLVLYGLHWEAGVTG*PICQVT Trigger: GGTTACTTGGCAGATGGGCCAGCCAGTGACTCCAGC...TTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTGAGAAGCAGCAGGCATaGACTGTGGGATCCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQLSAPLPLAHLQLGCWFEKQQA*TVGSQF Trigger: AAACTGGGATCCCACAGTCCATGCCTGCTGCTTCTC...AAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | ATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCATTTTGCCCCCAATGGATGAACCTCTaGGGGCCAAGGGTATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IDSEERRFPRRIPCPFCPQWMNL*GPRVCQ Trigger: CTGGCATACCCTTGGCCCCCAGAGGTTCATCCATTG...GGGGCAAAATGGACATGGGATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGCAATGGATGAACCTCTaGGGGCCAAGGGTATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHKTFCTVGVFCRQAWELQWMNL*GPRVCQ Trigger: CTGGCATACCCTTGGCCCCCAGAGGTTCATCCATTG...CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTCCTCTGCATGGTCCCAGAGGCTaGCAGGGATTCAGATACAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLCSKNLSERTPVVVPPLHGPRG*QGFRYN Trigger: GTTGTATCTGAATCCCTGCCAGCCTCTGGGACCATG...CAGAGGAGGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCACATCTCCTGCCCTCTaGGCTGTCAAAAGTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LDASLPIDSEERRFPRRITSPAL*AVKSPL Trigger: AAGTGGACTTTTGACAGCCCAGAGGGCAGGAGATGT...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTCTTCCGAGCCAGGTTaGGCTGGCAGCACCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGSSEPG*AGSTWQ Trigger: TTGCCAGGTGCTGCCAGCCCAACCTGGCTCGGAAGA...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CCACGAGGTTACATGTCGCCATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGACACAGGTACAGGGGGTaGGACTGCATTAGCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRGYMSPFSISAPRTSQRHRYRG*DCISFP Trigger: AGGGAAGCTAATGCAGTCCCACCCCCTGTACCTGTG...TCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATGGCGACATGTAACCTCGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| 3UTR CAA 72 bp | TTCTGCTCCACTCCCACTTGCACACCTTCAGTTGGGTaGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FCSTPTCTPSVG*LVLYGLHWEGG Trigger: CCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR TCA 90 bp | GCTGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGTGGGTTGGGAAGCATTaGAGAAGCTGTTGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGHKTFCTVGVFCRQAWEWVGKH*RSCWVG Trigger: CCCAACCCAACAGCTTCTTCAATGCTTCCCAACCCA...CTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR TCA 90 bp | CTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTGACAAGGAGAGCTTTCTGTTCTGCTaGTCTTTCGGACTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHSWSLPQRNWSYPSDKESFLFC*SFGLHC Trigger: GCAGTGGAGTCCGAAAGATCAGCAGAACAGAAAGCT...CTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGGATGTCAAAGAGTACTaGGTTGGCTCCTCGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: IDSPPFLVSTSEELELPEDVKEY*VGSSLT Trigger: GGTGAGCGAGGAGCCAACGCAGTACTCTTTGACATC...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | TGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTATGACCCGGAGCTCCTaGCCCTCTGAGAACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WTQDFLHCRCVLQTSLGAMTRSS*PSENSS Trigger: AGAAGAGTTCTCAGAGGGGCAGGAGCTCCGGGTCAT...AGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGGATACCGCCAAGTGCTaGTGTTCTTCTGGGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CQKLSLEESTPQMHTGYWDTAKC*CSSGAR Trigger: CCGGGCCCCAGAAGAACAGCAGCACTTGGCGGTATC...CCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCGGAGATACCGCCAAGTaGTGCTGTTCTTCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGGDTAK*CCSSGA Trigger: GGCCCCAGAAGAACAGCAGCACTTGGCGGTATCTCC...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGGAGATACCGCCAAGTaGTGCTGTTCTTCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKLSLEESTPQMHTGYWLGDTAK*CCSSGA Trigger: GGCCCCAGAAGAACAGCAGCACTTGGCGGTATCTCC...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGACTGGCTGGCCCATCTaGCAAGTAACCGCTGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKLSLEESTPQMHTGYWLTGWPI*QVTAAF Trigger: GAACGCAGCGGTTACTTGGCAGATGGGCCAGCCAGT...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCACTGGCTGGCCCATCTaGCAAGTAACCGCTGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGTGWPI*QVTAAF Trigger: GAACGCAGCGGTTACTTGGCAGATGGGCCAGCCAGT...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | TGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTAGGGGTCAAAGTCACTaGTCAGGGAGCTTCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WTQDFLHCRCVLQTSLGARGQSH*SGSFGR Trigger: CCTTCCGAAGCTCCCTGAGCAGTGACTTTGACCCCT...AGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | TGTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGTGGTTCCTGGTAAGATaGAGAGGCTGCCGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CQKLSLEESTPQMHTGYWWFLVR*RGCRGL Trigger: CAGGCCCCGGCAGCCTCTCCATCTTACCAGGAACCA...CCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGAGTCACTGGCTaGCCCATCTGCCAAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: QKLSLEESTPQMHTGYWLAGVTG*PICQVT Trigger: GGTTACTTGGCAGATGGGCCAGCCAGTGACTCCAGC...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QKLSLEESTPQMHTGYWLLSWSH*LAHLPS Trigger: ACTTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAG...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGCTGGCTGTATCCCTTTCCCTTaGAGATCCCCTTCAGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLEESTPQMHTGYWLAGCIPFP*RSPSGL Trigger: TAGTCCTGAAGGGGATCTCCAAGGGAAAGGGATACA...GCCAGCCAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCTGTATCCCTTTCCCTTaGAGATCCCCTTCAGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: LDASLPIDSEERRFPRRICIPFP*RSPSGL Trigger: TAGTCCTGAAGGGGATCTCCAAGGGAAAGGGATACA...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGGGATCCCAGTTTCTaGGCCAGGCTTCCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGWDPSF*ARLPAM Trigger: CATGGCAGGAAGCCTGGCCCAGAAACTGGGATCCCA...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | TACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTCTTCTTTTGTGGTGTGATGAGCTGCTaGTCAGGGAGAGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YRETSLGTGAHLNSFFFCGVMSC*SGRDGS Trigger: GGAGCCATCTCTCCCTGACCAGCAGCTCATCACACC...ACAAAAGAAGAAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | GGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGCATGGTCCCAGAGGCTaGCAGGGATTCAGATACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GHKTFCTVGVFCRQAWELHGPRG*QGFRYN Trigger: GTTGTATCTGAATCCCTGCCAGCCTCTGGGACCATG...CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCCATGGTCCCAGAGGCTaGCAGGGATTCAGATACAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSPSLLQEPLREDSCSCAHGPRG*QGFRYN Trigger: GTTGTATCTGAATCCCTGCCAGCCTCTGGGACCATG...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | AGGGAGAAGGTACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTACATCTCCTGCCCTCTaGGCTGTCAAAAGTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: REKVQRDLSWDWGSPKLLTSPAL*AVKSPL Trigger: AAGTGGACTTTTGACAGCCCAGAGGGCAGGAGATGT...AAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTACCTTCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | CCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAACACAGGTACAGGGGGTaGGACTGCATTAGCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTCTPSVGLLVLYGLHWEHRYRG*DCISFP Trigger: AGGGAAGCTAATGCAGTCCCACCCCCTGTACCTGTG...TTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR TCA 90 bp | TGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTCGGGGCCTGGGAAAATaGATCTCCCTCTACGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: WTQDFLHCRCVLQTSLGARGLGK*ISLYDV Trigger: AACATCGTAGAGGGAGATTCATTTTCCCAGGCCCCG...AGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR TCA 90 bp | TACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTCTTCTTTTGTCAGCACCTGGCAATGTaGGTAAGGACATCTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YRETSLGTGAHLNSFFFCQHLAM*VRTSPA Trigger: GGCAGGAGATGTCCTTACTCACATTGCCAGGTGCTG...ACAAAAGAAGAAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGATGACCCGGAGCTCCTaGCCCTCTGAGAACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKLSLEESTPQMHTGYWLMTRSS*PSENSS Trigger: AGAAGAGTTCTCAGAGGGGCAGGAGCTCCGGGTCAT...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | TGTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGGGAGATACCGCCAAGTaGTGCTGTTCTTCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CQKLSLEESTPQMHTGYWGDTAK*CCSSGA Trigger: GGCCCCAGAAGAACAGCAGCACTTGGCGGTATCTCC...CCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCCCAGGCTTCCTGCCATaGCACTGGAACTGCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGPGFLP*HWNCLL Trigger: CAAAAGGCAGTTCCAGTGGCATGGCAGGAAGCCTGG...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | GCTGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGAGTAAGGACATCTCCTaGCCTCTGGGCTGTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGHKTFCTVGVFCRQAWESKDIS*PLGCQK Trigger: CTTTTGACAGCCCAGAGGGCAGGAGATGTCCTTACT...CTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | TGTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGGGGCAAGTCCGATGCTaGTATAGCCAGGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CQKLSLEESTPQMHTGYWGQVRC*YSQGST Trigger: TGTGGACCCCTGGCTATACCAGCATCGGACTTGCCC...CCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGCTGGCGAATGAGGTaGAGTCTTCTGCCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGCWRMR*SLLPGS Trigger: GGAACCAGGCAGAAGACTCCACCTCATTCGCCAGCA...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | AGTTACCCGAGTGACAAGGAGTTTGATAATCAAAAGATTCATCCCAGGCAGGTCTCTTCCGAGCCAGGTTaGGCTGGCAGCACCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYPSDKEFDNQKIHPRQVSSEPG*AGSTWQ Trigger: TTGCCAGGTGCTGCCAGCCCAACCTGGCTCGGAAGA...GACCTGCCTGGGATGAATCTTTTGATTATCAAACTCCTTGTCACTCGGGTAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCGGTTGTCGTCATCACTaGCGTTGCACAGGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGGCRHH*RCTGTG Trigger: CCCTGTACCTGTGCAACGCCAGTGATGACGACAACC...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGTGGGTTGGGAAGCATTaGAGAAGCTGTTGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKLSLEESTPQMHTGYWLWVGKH*RSCWVG Trigger: CCCAACCCAACAGCTTCTTCAATGCTTCCCAACCCA...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | TGTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCAGCACCTGGCAATGTaGGTAAGGACATCTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CQKLSLEESTPQMHTGYWQHLAM*VRTSPA Trigger: GGCAGGAGATGTCCTTACTCACATTGCCAGGTGCTG...CCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGTTGGGTGTGATGAGCTaGTGGTCAGGGAGAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CQKLSLEESTPQMHTGYWLGVMS*WSGRDG Trigger: GCCATCTCTCCCTGACCAGCAGCTCATCACACCCAA...CCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGGTGAGGCTGGATTTCTaGAAGTTCAAAAGACCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IDSPPFLVSTSEELELPEVRLDF*KFKRPL Trigger: CAGCGGTCTTTTGAACTTGCAGAAATCCAGCCTCAC...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | CCCACTTGCACACCTTCAGTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAAGTAAGGACATCTCCTaGCCTCTGGGCTGTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTCTPSVGLLVLYGLHWESKDIS*PLGCQK Trigger: CTTTTGACAGCCCAGAGGGCAGGAGATGTCCTTACT...TTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | TGTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGTGCTGGCGAATGAGGTaGAGTCTTCTGCCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQKLSLEESTPQMHTGYWCWRMR*SLLPGS Trigger: GGAACCAGGCAGAAGACTCCACCTCATTCGCCAGCA...CCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCGAGAAGCAGCAGGCATaGACTGTGGGATCCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGEKQQA*TVGSQF Trigger: AAACTGGGATCCCACAGTCCATGCCTGCTGCTTCTC...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCCATGGTCCCAGAGGCTaGCAGGGATTCAGATACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGHGPRG*QGFRYN Trigger: GTTGTATCTGAATCCCTGCCAGCCTCTGGGACCATG...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| 3UTR CAA 72 bp | CAACTTTCTGCTCCACTCCCACTTGCACACCTTCAGTaGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QLSAPLPLAHLQ*GCWFCMAYTGK Trigger: CTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAACTGAAGGTGTGCAAGTGGGAGTGGAGCAGAAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR TCA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGAGCTTTCTGTTCTGCTaGTCTTTCGGACTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKLSLEESTPQMHTGYWLSFLFC*SFGLHC Trigger: GCAGTGGAGTCCGAAAGATCAGCAGAACAGAAAGCT...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR TCA 90 bp | TACAGAGAGACCTCTCTTGGGACTGGGGCTCACCTAAACTCCTTCTTCTTTTGTAGCTTTCTGTTCTGCTaGTCTTTCGGACTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: YRETSLGTGAHLNSFFFCSFLFC*SFGLHC Trigger: GCAGTGGAGTCCGAAAGATCAGCAGAACAGAAAGCT...ACAAAAGAAGAAGGAGTTTAGGTGAGCCCCAGTCCCAAGAGAGGTCTCTCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR GCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCAGTAAGGACATCTCCTaGCCTCTGGGCTGTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGSKDIS*PLGCQK Trigger: CTTTTGACAGCCCAGAGGGCAGGAGATGTCCTTACT...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | AGTTACCCGAGTGACAAGGAGTTTGATAATCAAAAGATTCATCCCAGGCAGGTCTGCTGGCGAATGAGGTaGAGTCTTCTGCCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SYPSDKEFDNQKIHPRQVCWRMR*SLLPGS Trigger: GGAACCAGGCAGAAGACTCCACCTCATTCGCCAGCA...GACCTGCCTGGGATGAATCTTTTGATTATCAAACTCCTTGTCACTCGGGTAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | AGTTACCCGAGTGACAAGGAGTTTGATAATCAAAAGATTCATCCCAGGCAGGTCGGTTGTCGTCATCACTaGCGTTGCACAGGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SYPSDKEFDNQKIHPRQVGCRHH*RCTGTG Trigger: CCCTGTACCTGTGCAACGCCAGTGATGACGACAACC...GACCTGCCTGGGATGAATCTTTTGATTATCAAACTCCTTGTCACTCGGGTAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGTATCCCTTTCCCTTaGAGATCCCCTTCAGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: VKNSALRSLPHKCILDTGCIPFP*RSPSGL Trigger: TAGTCCTGAAGGGGATCTCCAAGGGAAAGGGATACA...GCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | AGTTACCCGAGTGACAAGGAGTTTGATAATCAAAAGATTCATCCCAGGCAGGTCGAGAAGCAGCAGGCATaGACTGTGGGATCCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SYPSDKEFDNQKIHPRQVEKQQA*TVGSQF Trigger: AAACTGGGATCCCACAGTCCATGCCTGCTGCTTCTC...GACCTGCCTGGGATGAATCTTTTGATTATCAAACTCCTTGTCACTCGGGTAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR GCA 90 bp | TGTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGGTGAGGCTGGATTTCTaGAAGTTCAAAAGACCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CQKLSLEESTPQMHTGYWVRLDF*KFKRPL Trigger: CAGCGGTCTTTTGAACTTGCAGAAATCCAGCCTCAC...CCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CCA 90 bp | TGTCAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGTGTATCCCTTTCCCTTaGAGATCCCCTTCAGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: CQKLSLEESTPQMHTGYWCIPFP*RSPSGL Trigger: TAGTCCTGAAGGGGATCTCCAAGGGAAAGGGATACA...CCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CCA 90 bp | CTCCCCGAGTCTGGCCACTCGGCTCGGGCTCGTCTACAGCCGGCTTaGTACCTCCTGGTGGCCAGCTGGCTGATGGCCCGGGCTGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LPESGHSARARLQPA*YLLVASWLMARAVR Trigger: GCGGACAGCCCGGGCCATCAGCCAGCTGGCCACCAGGAGGTACCAAGCCGGCTGTAGACGAGCCCGAGCCGAGTGGCCAGACTCGGGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CAA 90 bp | GGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATCTCTTCCGAGCCAGGTaGGGCTGGCAGCACCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPAPPRSGTPGPGRTLSHLFRAR*GWQHLA Trigger: TGCCAGGTGCTGCCAGCCCAACCTGGCTCGGAAGAG...ATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS GCA 90 bp | CGCCGCCAGCACCCGTCCTGTGTGTCCGAAGCCTGCGTGCAGGGTTaGCATCAGCAGCCAGGGCCAGAGGACAGCCAGCTGCAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRQHPSCVSEACVQG*HQQPGPEDSQLQLV Trigger: CACCAGCTGCAGCTGGCTGTCCTCTGGCCCTGGCTGCTGATGGCAACCCTGCACGCAGGCTTCGGACACACAGGACGGGTGCTGGCGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS GCA 90 bp | GGACTCCACTGCCGCCGCCAGCACCCGTCCTGTGTGTCCGAAGCCTaGGTGCAGGGTTGCCATCAGCAGCCAGGGCCAGAGGACAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLHCRRQHPSCVSEA*VQGCHQQPGPEDSQ Trigger: CTGGCTGTCCTCTGGCCCTGGCTGCTGATGGCAACCCTGCACGCAGGCTTCGGACACACAGGACGGGTGCTGGCGGCGGCAGTGGAGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CCA 90 bp | ACAGATGGCACACACGGGGGTCGAGCTGCAGCTACTCCCCGAGTCTaGCCACTCGGCTCGGGCTCGTCTACAGCCGGCTTGGTACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TDGTHGGRAAATPRV*PLGSGSSTAGLVPP Trigger: AGGAGGTACCAAGCCGGCTGTAGACGAGCCCGAGCCGAGTGGCCAGACTCGGGGAGTAGCTGCAGCTCGACCCCCGTGTGTGCCATCTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CAA 90 bp | GGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATTCTCCCTCTACGATGTaGAACATGCAGAGGGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GPAPPRSGTPGPGRTLSHSPSTM*NMQRGQ Trigger: TTGCCCCCTCTGCATGTTCAACATCGTAGAGGGAGA...ATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CAA 90 bp | TGCTGTGGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGTCTCCCTCTACGATGTaGAACATGCAGAGGGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CCGPAPPRSGTPGPGRTLSPSTM*NMQRGQ Trigger: TTGCCCCCTCTGCATGTTCAACATCGTAGAGGGAGA...CAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACCACAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CAA 90 bp | CAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCATCAGGCCGAGAGCCCATGCTaGGCTCCTGGGAGGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QAWELGQEIAPPACTRHQAESPC*APGRAE Trigger: TTCTGCCCTCCCAGGAGCCAAGCATGGGCTCTCGGC...CTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CAA 90 bp | GGTCCTGCTCCTCCCAGGAGCGGGACCCCGGGGCCAGGTCGAACCCTGAGCCATGTGGGTTGGGAAGCATaGAAGAAGCTGTTGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPAPPRSGTPGPGRTLSHVGWEA*KKLLGW Trigger: CCAACCCAACAGCTTCTTCAATGCTTCCCAACCCAC...ATGGCTCAGGGTTCGACCTGGCCCCGGGGTCCCGCTCCTGGGAGGAGCAGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CAA 90 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCGCCGAGAGCCCATGCTaGGCTCCTGGGAGGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WVAGFVWLTLGRWASGPCAESPC*APGRAE Trigger: TTCTGCCCTCCCAGGAGCCAAGCATGGGCTCTCGGC...GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS TCA 90 bp | AGGATCCGGTCTGCTATGGTGGGGGCGGCACCTGATGCGCAGCACTaGGGCCAGGATGATCACAAAGACGGTACCCACCACGGTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RIRSAMVGAAPDAQH*GQDDHKDGTHHGQE Trigger: CTCCTGACCGTGGTGGGTACCGTCTTTGTGATCATCCTGGCCTCAGTGCTGCGCATCAGGTGCCGCCCCCACCATAGCAGACCGGATCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS TCA 90 bp | TGCTGTTCTTCTGGGGCCCGGAGATGTGAAGTCCTGGGAAGGCGCTaGTGCCGAGAGCCCATGCTTGGCTCCTGGGAGGGCAGAAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CCSSGARRCEVLGRR*CREPMLGSWEGRKG Trigger: ACCCTTTCTGCCCTCCCAGGAGCCAAGCATGGGCTCTCGGCATCAGCGCCTTCCCAGGACTTCACATCTCCGGGCCCCAGAAGAACAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS GCA 90 bp | CCTCTGAGAACTCTTCTAGACAGATGGCACACACGGGGGTCGAGCTaGAGCTACTCCCCGAGTCTGGCCACTCGGCTCGGGCTCGTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: PLRTLLDRWHTRGSS*SYSPSLATRLGLVY Trigger: GTAGACGAGCCCGAGCCGAGTGGCCAGACTCGGGGAGTAGCTGCAGCTCGACCCCCGTGTGTGCCATCTGTCTAGAAGAGTTCTCAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS TCA 90 bp | TGGAGATACCGCCAAGTGCTGCTGTTCTTCTGGGGCCCGGAGATGTaGAGTCCTGGGAAGGCGCTGATGCCGAGAGCCCATGCTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WRYRQVLLFFWGPEM*SPGKALMPRAHAWL Trigger: GAGCCAAGCATGGGCTCTCGGCATCAGCGCCTTCCCAGGACTTCACATCTCCGGGCCCCAGAAGAACAGCAGCACTTGGCGGTATCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS GCA 90 bp | CAGCAGGCATGGACTGTGGGATCCCAGTTTCTGGGCCAGGCTTCCTaGCATGCCACTGGAACTGCCTTTTGTAGTGGTGGTGGCGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QQAWTVGSQFLGQAS*HATGTAFCSGGGGA Trigger: GGCACCGCCACCACCACTACAAAAGGCAGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAGAAACTGGGATCCCACAGTCCATGCCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CCA 90 bp | GTTCTGTACAGTAGCTTTCTCCAGACCCGCTGCTCTCATGAGGCCTaGCCCGTCGTAGGGCCACTGGGCAAGCTGCAGGATGCTGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLYSSFLQTRCSHEA*PVVGPLGKLQDAER Trigger: CCTCTCAGCATCCTGCAGCTTGCCCAGTGGCCCTACGACGGGCCAGGCCTCATGAGAGCAGCGGGTCTGGAGAAAGCTACTGTACAGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CCA 90 bp | CCGAGTCACTGGATGAGCCGTGACAGGGCCCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAAGTAACCGCTGCGTTCTGTACAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSHWMSRDRALSWSH*LAHLPSNRCVLYSS Trigger: GCTACTGTACAGAACGCAGCGGTTACTTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAGGGCCCTGTCACGGCTCATCCAGTGACTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS-3UTR CAA 90 bp | TGTAAGAACAGGAAGGAAGAACCGCTCCTCCCTGAGCACCAGCCAGGGAGAAGGCTCTTCCGAGCCAGGTaGGGCTGGCAGCACCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CKNRKEEPLLPEHQPGRRLFRAR*GWQHLA Trigger: TGCCAGGTGCTGCCAGCCCAACCTGGCTCGGAAGAG...CCTTCTCCCTGGCTGGTGCTCAGGGAGGAGCGGTTCTTCCTTCCTGTTCTTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS-3UTR CAA 90 bp | TGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGCTCGTCATCACTGGCGTaGCACAGGTACAGGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WVAGFVWLTLGRWASGPCSSSLA*HRYRGW Trigger: CCACCCCCTGTACCTGTGCAACGCCAGTGATGACGA...GCAGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS TCA 90 bp | GGGCAAGTCCGATGCTGGTATAGCCAGGGGTCCACACACGTTCGATaGAACTCGTGGAGGCACGAAATGACCCGGAGCTCCTGCCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GQVRCWYSQGSTHVR*NSWRHEMTRSSCPS Trigger: AGAGGGGCAGGAGCTCCGGGTCATTTCGTGCCTCCACGAGTTTCATCGAACGTGTGTGGACCCCTGGCTATACCAGCATCGGACTTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CCA 90 bp | GCCTTTTGTAGTGGTGGTGGCGGTGCCGGTGATAGTGTATGTGGCTaGAAACCTGGGTCTCTCCCCTGGGTACCACTGAGTCCAGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFCSGGGGAGDSVCG*KPGSLPWVPLSPAS Trigger: GCTCGCTGGACTCAGTGGTACCCAGGGGAGAGACCCAGGTTTCCAGCCACATACACTATCACCGGCACCGCCACCACCACTACAAAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTCAAAGAGTACTGCGTaGGCTCCTCGCTCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPGRTLSHLEHTRHRSFISKSTA*APRSPA Trigger: GGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTGA...GATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCGCCGAGAGCCCATGCTaGGCTCCTGGGAGGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LDASLPIDSEERRFPRRIAESPC*APGRAE Trigger: TTCTGCCCTCCCAGGAGCCAAGCATGGGCTCTCGGC...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTTCGTCATCACTGGCGTaGCACAGGTACAGGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGLLVLYGLHWEGGPPGPSSSLA*HRYRGW Trigger: CCACCCCCTGTACCTGTGCAACGCCAGTGATGACGA...AGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS GCA 90 bp | AGGATGCTGAGAGGTACATCGGAGGCGATTCAGCCCCCAGCCCTGTaGATAGGGGTGTGGAGATACCGCCAAGTGCTGCTGTTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RMLRGTSEAIQPPAL*IGVWRYRQVLLFFW Trigger: CCAGAAGAACAGCAGCACTTGGCGGTATCTCCACACCCCTATGCACAGGGCTGGGGGCTGAATCGCCTCCGATGTACCTCTCAGCATCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCTTGGGAGCTGGGGCAGGAAATAGCACCTCCCGCCTGCACTCGCCATCAGTCTCCCTCTACGATGTaGAACATGCAGAGGGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QAWELGQEIAPPACTRHQSPSTM*NMQRGQ Trigger: TTGCCCCCTCTGCATGTTCAACATCGTAGAGGGAGA...CTGATGGCGAGTGCAGGCGGGAGGTGCTATTTCCTGCCCCAGCTCCCAAGCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATACACTGGCTGTGAACTaGAGTAACAGGGGCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GARSNPEPSGAHSPSKLHTLAVN*SNRGLG Trigger: TCCCAGGCCCCTGTTACTCAAGTTCACAGCCAGTGT...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCACACTGGCTGTGAACTaGAGTAACAGGGGCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPGRTLSHLEHTRHRSFITLAVN*SNRGLG Trigger: TCCCAGGCCCCTGTTACTCAAGTTCACAGCCAGTGT...GATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATAACCCAGGCTCAAGGTaGTCGTCATCACTGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GARSNPEPSGAHSPSKLHNPGSR*SSSLAL Trigger: CAACGCCAGTGATGACGACAACCTTGAGCCTGGGTT...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS TCA 90 bp | GGCCTGGGACTTCATGTAGCAGCCTCCTATCCGGACCTGGAGGTCTaGACATCAATGGATGAACCTCTGGGGGCCAAGGGTATGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GLGLHVAASYPDLEV*TSMDEPLGAKGMPD Trigger: GTCTGGCATACCCTTGGCCCCCAGAGGTTCATCCATTGATGTTCAGACCTCCAGGTCCGGATAGGAGGCTGCTACATGAAGTCCCAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS TCA 90 bp | CAGCTCCTCTTCCGAGCCAGGTTGGGCTGGCAGCACCTGGCAATGTaGGTAAGGACATCTCCTGCCCTCTGGGCTGTCAAAAGTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: QLLFRARLGWQHLAM*VRTSPALWAVKSPL Trigger: AAGTGGACTTTTGACAGCCCAGAGGGCAGGAGATGTCCTTACTCACATTGCCAGGTGCTGCCAGCCCAACCTGGCTCGGAAGAGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | TTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTCTCAAAGAGTACTGCGTaGGCTCCTCGCTCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQWSQEAWRKEMLAVVLLSKSTA*APRSPA Trigger: GGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTGA...GAGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGGCCGAGAGCCCATGCTaGGCTCCTGGGAGGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AGHKTFCTVGVFCRQAWEAESPC*APGRAE Trigger: TTCTGCCCTCCCAGGAGCCAAGCATGGGCTCTCGGC...CTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTACACTGGCTGTGAACTaGAGTAACAGGGGCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VGLLVLYGLHWEGGPPGPTLAVN*SNRGLG Trigger: TCCCAGGCCCCTGTTACTCAAGTTCACAGCCAGTGT...AGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS TCA 90 bp | AGGCAGAAGGAAGATGATAGTGGGCGTGGCCAGGATGCTGGCGAATaGGGTGGAGTCTTCTGCCTGGTTCCTGGTAAGATGGAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RQKEDDSGRGQDAGE*GGVFCLVPGKMERL Trigger: CAGCCTCTCCATCTTACCAGGAACCAGGCAGAAGACTCCACCTCATTCGCCAGCATCCTGGCCACGCCCACTATCATCTTCCTTCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS GCA 90 bp | CAGGTTGGGCTGGCAGCACCTGGCAATGTGAGTAAGGACATCTCCTaGCCTCTGGGCTGTCAAAAGTCCACTTGGAATGTCCCTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QVGLAAPGNVSKDIS*PLGCQKSTWNVPLQ Trigger: CTGGAGAGGGACATTCCAAGTGGACTTTTGACAGCCCAGAGGGCAGGAGATGTCCTTACTCACATTGCCAGGTGCTGCCAGCCCAACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS CCA 90 bp | CTGAGTGTGAGAAGCAGCAGGCATGGACTGTGGGATCCCAGTTTCTaGGCCAGGCTTCCTGCCATGCCACTGGAACTGCCTTTTGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSVRSSRHGLWDPSF*ARLPAMPLELPFVV Trigger: CACTACAAAAGGCAGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAGAAACTGGGATCCCACAGTCCATGCCTGCTGCTTCTCACACTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS CCA 90 bp | GTGAGTAAGGACATCTCCTGCCCTCTGGGCTGTCAAAAGTCCACTTaGAATGTCCCTCTCCAGGTAAGCATGGTCCCAGAGGCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSKDISCPLGCQKST*NVPLQVSMVPEAGR Trigger: CCTGCCAGCCTCTGGGACCATGCTTACCTGGAGAGGGACATTCCAAGTGGACTTTTGACAGCCCAGAGGGCAGGAGATGTCCTTACTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | CCACGAGGTTACATGTCGCCATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGATCGTCTACAGCCGGCTaGGTACCTCCTGGTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRGYMSPFSISAPRTSQRSSTAG*VPPGGQ Trigger: CTGGCCACCAGGAGGTACCAAGCCGGCTGTAGACGA...TCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATGGCGACATGTAACCTCGTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGTTGCTGGTTTTGTATGGCTTACACTGGGAAGGTGGGCCTCCGGGCCCTGTGGGTTGGGAAGCATaGAAGAAGCTGTTGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGLLVLYGLHWEGGPPGPVGWEA*KKLLGW Trigger: CCAACCCAACAGCTTCTTCAATGCTTCCCAACCCAC...AGGGCCCGGAGGCCCACCTTCCCAGTGTAAGCCATACAAAACCAGCAACCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCCAGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTGTCAAAAGTCCACTaGGAATGTCCCTCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GARSNPEPSGAHSPSKLHLSKVH*ECPSPG Trigger: ACCTGGAGAGGGACATTCCAAGTGGACTTTTGACAG...ATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCTGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTCAGTGAACCCACTGGCTTGTGTGAGCTTGAAGCTGGGGCAGAGGAGACCTTGTATCCCTTTCCCTaGGAGATCCCCTTCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: AFSEPTGLCELEAGAEETLYPFP*EIPFRT Trigger: AGTCCTGAAGGGGATCTCCAAGGGAAAGGGATACAA...GGTCTCCTCTGCCCCAGCTTCAAGCTCACACAAGCCAGTGGGTTCACTGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCGAACCCTGAGCCATCTGGAGCACACTCGCCATCGAAGCTTCATCTGACCGTGGGTTGGGAAGCATaGAAGAAGCTGTTGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSNPEPSGAHSPSKLHLTVGWEA*KKLLGW Trigger: CCAACCCAACAGCTTCTTCAATGCTTCCCAACCCAC...GGTCAGATGAAGCTTCGATGGCGAGTGTGCTCCAGATGGCTCAGGGTTCGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGCTCTTCCGAGCCAGGTaGGGCTGGCAGCACCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QKLSLEESTPQMHTGYWLLFRAR*GWQHLA Trigger: TGCCAGGTGCTGCCAGCCCAACCTGGCTCGGAAGAG...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | CATTCTCCATCTCTGCTCCAAGAACCTCTCAGAGAGGACTCCTGTAGTTGTGCCTCAAAGAGTACTGCGTaGGCTCCTCGCTCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSPSLLQEPLREDSCSCASKSTA*APRSPA Trigger: GGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTGA...GGCACAACTACAGGAGTCCTCTCTGAGAGGTTCTTGGAGCAGAGATGGAGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCTCTCCCTCTACGATGTaGAACATGCAGAGGGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LDASLPIDSEERRFPRRISPSTM*NMQRGQ Trigger: TTGCCCCCTCTGCATGTTCAACATCGTAGAGGGAGA...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGTGGTCCCAGGAAGCATGGCGAAAGGAGATGCTTGCTGTGGTCCTGCTTTGTATCCCTTTCCCTaGGAGATCCCCTTCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LPVVPGSMAKGDACCGPALYPFP*EIPFRT Trigger: AGTCCTGAAGGGGATCTCCAAGGGAAAGGGATACAA...AGCAGGACCACAGCAAGCATCTCCTTTCGCCATGCTTCCTGGGACCACTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | ATTGATTCCCCTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGCGAGGGCTCTCCAGCTaGACGATGCTGATGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: IDSPPFLVSTSEELELPERGLSS*TMLMNP Trigger: TGGGTTCATCAGCATCGTCAAGCTGGAGAGCCCTCG...CTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAGGGGAATCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGCGAGGGCTCTCCAGCTaGACGATGCTGATGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GHKTFCTVGVFCRQAWELRGLSS*TMLMNP Trigger: TGGGTTCATCAGCATCGTCAAGCTGGAGAGCCCTCG...CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | CTGGATGCCAGTCTCCCCATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCTGTCAAAAGTCCACTaGGAATGTCCCTCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LDASLPIDSEERRFPRRILSKVH*ECPSPG Trigger: ACCTGGAGAGGGACATTCCAAGTGGACTTTTGACAG...GATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAATGGGGAGACTGGCATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | ATTGACTCTGAGGAGAGAAGGTTCCCAAGGAGGATCCCATGTCCATTTTGCCCCAACCCAGGCTCAAGGTaGTCGTCATCACTGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IDSEERRFPRRIPCPFCPNPGSR*SSSLAL Trigger: CAACGCCAGTGATGACGACAACCTTGAGCCTGGGTT...GGGGCAAAATGGACATGGGATCCTCCTTGGGAACCTTCTCTCCTCAGAGTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGTCAAAGAGTACTGCGTaGGCTCCTCGCTCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QKLSLEESTPQMHTGYWLSKSTA*APRSPA Trigger: GGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTGA...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGGTGGGTTGGGAAGCATaGAAGAAGCTGTTGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GHKTFCTVGVFCRQAWELVGWEA*KKLLGW Trigger: CCAACCCAACAGCTTCTTCAATGCTTCCCAACCCAC...CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | TGGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTACACTGGCTGTGAACTaGAGTAACAGGGGCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WTQDFLHCRCVLQTSLGATLAVN*SNRGLG Trigger: TCCCAGGCCCCTGTTACTCAAGTTCACAGCCAGTGT...AGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | CTCCATTCCTGGTCTCTACCTCAGAGGAACTGGAGTTACCCGAGTGACAAGGAGCTGTCAAAAGTCCACTaGGAATGTCCCTCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LHSWSLPQRNWSYPSDKELSKVH*ECPSPG Trigger: ACCTGGAGAGGGACATTCCAAGTGGACTTTTGACAG...CTCCTTGTCACTCGGGTAACTCCAGTTCCTCTGAGGTAGAGACCAGGAATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGTTGTATCCCTTTCCCTaGGAGATCCCCTTCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GHKTFCTVGVFCRQAWELLYPFP*EIPFRT Trigger: AGTCCTGAAGGGGATCTCCAAGGGAAAGGGATACAA...CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | GGACACAAGACTTTCTGCACTGTAGGTGTGTTCTGCAGACAAGCTTGGGAGCTGCTGTCAAAAGTCCACTaGGAATGTCCCTCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GHKTFCTVGVFCRQAWELLSKVH*ECPSPG Trigger: ACCTGGAGAGGGACATTCCAAGTGGACTTTTGACAG...CAGCTCCCAAGCTTGTCTGCAGAACACACCTACAGTGCAGAAAGTCTTGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAACTCAGCCTTGAGGAGTCTACCCCACAAATGCATACTGGATACTGGCTGTTGTATCCCTTTCCCTaGGAGATCCCCTTCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: QKLSLEESTPQMHTGYWLLYPFP*EIPFRT Trigger: AGTCCTGAAGGGGATCTCCAAGGGAAAGGGATACAA...CAGCCAGTATCCAGTATGCATTTGTGGGGTAGACTCCTCAAGGCTGAGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS CAA 90 bp | ACTCCCCGAGTCTGGCCACTCGGCTCGGGCTCGTCTACAGCCGGCTaGGTACCTCCTGGTGGCCAGCTGGCTGATGGCCCGGGCTGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: TPRVWPLGSGSSTAG*VPPGGQLADGPGCP Trigger: CGGACAGCCCGGGCCATCAGCCAGCTGGCCACCAGGAGGTACCAAGCCGGCTGTAGACGAGCCCGAGCCGAGTGGCCAGACTCGGGGAGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS TCA 72 bp | GTGGCCAGCTGGCTGATGGCCCGGGCTGTCCGCTGCTaGAGAGGATCCGGTCTGCTATGGTGGGGGCGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VASWLMARAVRC*RGSGLLWWGRH Trigger: GTGCCGCCCCCACCATAGCAGACCGGATCCTCTTCAGCAGCGGACAGCCCGGGCCATCAGCCAGCTGGCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS GCA 72 bp | TGCCGCCGCCAGCACCCGTCCTGTGTGTCCGAAGCCTaGGTGCAGGGTTGCCATCAGCAGCCAGGGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CRRQHPSCVSEA*VQGCHQQPGPE Trigger: CTCTGGCCCTGGCTGCTGATGGCAACCCTGCACGCAGGCTTCGGACACACAGGACGGGTGCTGGCGGCGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS CCA 72 bp | TCTGGCCACTCGGCTCGGGCTCGTCTACAGCCGGCTTaGTACCTCCTGGTGGCCAGCTGGCTGATGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SGHSARARLQPA*YLLVASWLMAR Trigger: CCGGGCCATCAGCCAGCTGGCCACCAGGAGGTACCAAGCCGGCTGTAGACGAGCCCGAGCCGAGTGGCCAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS CAA 72 bp | GTCTGGCCACTCGGCTCGGGCTCGTCTACAGCCGGCTaGGTACCTCCTGGTGGCCAGCTGGCTGATGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VWPLGSGSSTAG*VPPGGQLADGP Trigger: CGGGCCATCAGCCAGCTGGCCACCAGGAGGTACCAAGCCGGCTGTAGACGAGCCCGAGCCGAGTGGCCAGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS CCA 72 bp | ACACACGGGGGTCGAGCTGCAGCTACTCCCCGAGTCTaGCCACTCGGCTCGGGCTCGTCTACAGCCGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: THGGRAAATPRV*PLGSGSSTAGL Trigger: CAAGCCGGCTGTAGACGAGCCCGAGCCGAGTGGCCAGACTCGGGGAGTAGCTGCAGCTCGACCCCCGTGTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS TCA 72 bp | TCTGGGGCCCGGAGATGTGAAGTCCTGGGAAGGCGCTaGTGCCGAGAGCCCATGCTTGGCTCCTGGGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGARRCEVLGRR*CREPMLGSWEG Trigger: GCCCTCCCAGGAGCCAAGCATGGGCTCTCGGCATCAGCGCCTTCCCAGGACTTCACATCTCCGGGCCCCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS TCA 72 bp | GCCCGTCGTAGGGCCACTGGGCAAGCTGCAGGATGCTaGGAGGTACATCGGAGGCGATTCAGCCCCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ARRRATGQAAGC*EVHRRRFSPQP Trigger: GGGCTGGGGGCTGAATCGCCTCCGATGTACCTCTCAGCATCCTGCAGCTTGCCCAGTGGCCCTACGACGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
||
| CDS TCA 72 bp | TCCTCGCTCACCAGCCATTCGGGCCTTACTGGCCAGTaGCAGGCAGGGGCGAGGAGCTCGTCGAGGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSLTSHSGLTGQ*QAGARSSSRAL Trigger: GAGAGCCCTCGACGAGCTCCTCGCCCCTGCCTGTCACTGGCCAGTAAGGCCCGAATGGCTGGTGAGCGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS GCA 72 bp | ACTCTTCTAGACAGATGGCACACACGGGGGTCGAGCTaGAGCTACTCCCCGAGTCTGGCCACTCGGCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: TLLDRWHTRGSS*SYSPSLATRLG Trigger: CCCGAGCCGAGTGGCCAGACTCGGGGAGTAGCTGCAGCTCGACCCCCGTGTGTGCCATCTGTCTAGAAGAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS TCA 72 bp | CGCCAAGTGCTGCTGTTCTTCTGGGGCCCGGAGATGTaGAGTCCTGGGAAGGCGCTGATGCCGAGAGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RQVLLFFWGPEM*SPGKALMPRAH Trigger: ATGGGCTCTCGGCATCAGCGCCTTCCCAGGACTTCACATCTCCGGGCCCCAGAAGAACAGCAGCACTTGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS GCA 72 bp | CGCTGCGTTCTGTACAGTAGCTTTCTCCAGACCCGCTaGTCTCATGAGGCCTGGCCCGTCGTAGGGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: RCVLYSSFLQTR*SHEAWPVVGPL Trigger: CAGTGGCCCTACGACGGGCCAGGCCTCATGAGAGCAGCGGGTCTGGAGAAAGCTACTGTACAGAACGCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CCA 72 bp | TGGATGAGCCGTGACAGGGCCCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAAGTAACCGCTGCGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: WMSRDRALSWSH*LAHLPSNRCVL Trigger: CAGAACGCAGCGGTTACTTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAGGGCCCTGTCACGGCTCATCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CAA 72 bp | AGGCAGGGGCGAGGAGCTCGTCGAGGGCTCTCCAGCTaGACGATGCTGATGAACCCAGGCTCAAGGTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: RQGRGARRGLSS*TMLMNPGSRLS Trigger: CGACAACCTTGAGCCTGGGTTCATCAGCATCGTCAAGCTGGAGAGCCCTCGACGAGCTCCTCGCCCCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS CAA 90 bp | GCCAGTGACAGGCAGGGGCGAGGAGCTCGTCGAGGGCTCTCCAGCTaGACGATGCTGATGAACCCAGGCTCAAGGTTGTCGTCATCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ASDRQGRGARRGLSS*TMLMNPGSRLSSSL Trigger: CAGTGATGACGACAACCTTGAGCCTGGGTTCATCAGCATCGTCAAGCTGGAGAGCCCTCGACGAGCTCCTCGCCCCTGCCTGTCACTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS TCA 72 bp | TCTGCTATGGTGGGGGCGGCACCTGATGCGCAGCACTaGGGCCAGGATGATCACAAAGACGGTACCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: SAMVGAAPDAQH*GQDDHKDGTHH Trigger: GTGGTGGGTACCGTCTTTGTGATCATCCTGGCCTCAGTGCTGCGCATCAGGTGCCGCCCCCACCATAGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS GCA 72 bp | AGAGGTACATCGGAGGCGATTCAGCCCCCAGCCCTGTaGATAGGGGTGTGGAGATACCGCCAAGTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RGTSEAIQPPAL*IGVWRYRQVLL Trigger: CAGCAGCACTTGGCGGTATCTCCACACCCCTATGCACAGGGCTGGGGGCTGAATCGCCTCCGATGTACCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CAA 90 bp | GCTAGGCCAGGGGCTGGCTCTGTAAGAGCCCTGGGCCGTTGTGGGTaGGGAAGCATTGAAGAAGCTGTTGGGTTGGGTGTGATGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ARPGAGSVRALGRCG*GSIEEAVGLGVMSC Trigger: GCAGCTCATCACACCCAACCCAACAGCTTCTTCAATGCTTCCCAACCCACAACGGCCCAGGGCTCTTACAGAGCCAGCCCCTGGCCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CAA 90 bp | CGAGGGCTCTCCAGCTTGACGATGCTGATGAACCCAGGCTCAAGGTaGTCGTCATCACTGGCGTTGCACAGGTACAGGGGGTGGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RGLSSLTMLMNPGSR*SSSLALHRYRGWDC Trigger: GCAGTCCCACCCCCTGTACCTGTGCAACGCCAGTGATGACGACAACCTTGAGCCTGGGTTCATCAGCATCGTCAAGCTGGAGAGCCCTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS CCA 72 bp | AGTGGTGGTGGCGGTGCCGGTGATAGTGTATGTGGCTaGAAACCTGGGTCTCTCCCCTGGGTACCACTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SGGGGAGDSVCG*KPGSLPWVPLS Trigger: ACTCAGTGGTACCCAGGGGAGAGACCCAGGTTTCCAGCCACATACACTATCACCGGCACCGCCACCACCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CCA 72 bp | AGAAGCAGCAGGCATGGACTGTGGGATCCCAGTTTCTaGGCCAGGCTTCCTGCCATGCCACTGGAACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RSSRHGLWDPSF*ARLPAMPLELP Trigger: AGGCAGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAGAAACTGGGATCCCACAGTCCATGCCTGCTGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CAA 90 bp | TGCTCAGCAGCTGATCGATCCTCGGTGATGTCAAAGAGTACTGCGTaGGCTCCTCGCTCACCAGCCATTCGGGCCTTACTGGCCAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CSAADRSSVMSKSTA*APRSPAIRALLASD Trigger: GTCACTGGCCAGTAAGGCCCGAATGGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTGACATCACCGAGGATCGATCAGCTGCTGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS TCA 72 bp | GCTGCTGCAGCTGCTCAGCAGCTGATCGATCCTCGGTaGTGTCAAAGAGTACTGCGTTGGCTCCTCGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: AAAAAQQLIDPR*CQRVLRWLLAH Trigger: GTGAGCGAGGAGCCAACGCAGTACTCTTTGACATCACCGAGGATCGATCAGCTGCTGAGCAGCTGCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS TCA 72 bp | CTCCTATCCGGACCTGGAGGTCTGAACATCAATGGATaGACCTCTGGGGGCCAAGGGTATGCCAGACGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLSGPGGLNING*TSGGQGYARRG Trigger: TCCCCGTCTGGCATACCCTTGGCCCCCAGAGGTTCATCCATTGATGTTCAGACCTCCAGGTCCGGATAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS TCA 72 bp | TTCCGAGCCAGGTTGGGCTGGCAGCACCTGGCAATGTaGGTAAGGACATCTCCTGCCCTCTGGGCTGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: FRARLGWQHLAM*VRTSPALWAVK Trigger: TTTGACAGCCCAGAGGGCAGGAGATGTCCTTACTCACATTGCCAGGTGCTGCCAGCCCAACCTGGCTCGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS GCA 72 bp | ACTGCGTTGGCTCCTCGCTCACCAGCCATTCGGGCCTaGATTAGCTTCCCTTCTGCTGGAGTCACTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TALAPRSPAIRA*ISFPSAGVTSA Trigger: TGCAGAAGTGACTCCAGCAGAAGGGAAGCTAATGCAGGCCCGAATGGCTGGTGAGCGAGGAGCCAACGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121782.9 |
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| CDS CCA 72 bp | TGGGTTGGGTGTGATGAGCTGCTGGTCAGGGAGAGATaGCTCCAGCTGAGTGTGAGAAGCAGCAGGCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: WVGCDELLVRER*LQLSVRSSRHG Trigger: TCCATGCCTGCTGCTTCTCACACTCAGCTGGAGCCATCTCTCCCTGACCAGCAGCTCATCACACCCAACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CCA 72 bp | CGGACCTGGAGGTCTGAACATCAATGGATGAACCTCTaGGGGCCAAGGGTATGCCAGACGGGGACTGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RTWRSEHQWMNL*GPRVCQTGTVV Trigger: CACTACAGTCCCCGTCTGGCATACCCTTGGCCCCCAGAGGTTCATCCATTGATGTTCAGACCTCCAGGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CCA 72 bp | CAGCCTCCTATCCGGACCTGGAGGTCTGAACATCAATaGATGAACCTCTGGGGGCCAAGGGTATGCCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: QPPIRTWRSEHQ*MNLWGPRVCQT Trigger: CGTCTGGCATACCCTTGGCCCCCAGAGGTTCATCCATTGATGTTCAGACCTCCAGGTCCGGATAGGAGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CAA 90 bp | TGCTCAGCAGCTGATCGATCCTCGGTGATGTCAAAGAGTACTGCGTaGGCTCCTCGCTCACCAGCCATTCGGGCCTGCATTAGCTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CSAADRSSVMSKSTA*APRSPAIRACISFP Trigger: AGGGAAGCTAATGCAGGCCCGAATGGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTGACATCACCGAGGATCGATCAGCTGCTGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121782.9 |
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| CDS GCA 72 bp | TGGACTGTGGGATCCCAGTTTCTGGGCCAGGCTTCCTaGCATGCCACTGGAACTGCCTTTTGTAGTGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: WTVGSQFLGQAS*HATGTAFCSGG Trigger: ACCACCACTACAAAAGGCAGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAGAAACTGGGATCCCACAGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CAA 72 bp | TCCAGCTTGACGATGCTGATGAACCCAGGCTCAAGGTaGTCGTCATCACTGGCGTTGCACAGGTACAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLTMLMNPGSR*SSSLALHRYRG Trigger: CCCCCTGTACCTGTGCAACGCCAGTGATGACGACAACCTTGAGCCTGGGTTCATCAGCATCGTCAAGCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS CAA 72 bp | GCTGATCGATCCTCGGTGATGTCAAAGAGTACTGCGTaGGCTCCTCGCTCACCAGCCATTCGGGCCTTACTG | + |
|
Preference number: 6 (lower is better) Translates to: ADRSSVMSKSTA*APRSPAIRALL Trigger: CAGTAAGGCCCGAATGGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTGACATCACCGAGGATCGATCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS CAA 72 bp | GCTGATCGATCCTCGGTGATGTCAAAGAGTACTGCGTaGGCTCCTCGCTCACCAGCCATTCGGGCCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: ADRSSVMSKSTA*APRSPAIRACI Trigger: AATGCAGGCCCGAATGGCTGGTGAGCGAGGAGCCAACGCAGTACTCTTTGACATCACCGAGGATCGATCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121782.9 |
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| CDS CAA 90 bp | CCAGAGGCTGGCAGGGATTCAGATACAACCACACTGGCTGTGAACTaGAGTAACAGGGGCCTGGGACTTCATGTAGCAGCCTCCTATCCG | + |
|
Preference number: 6 (lower is better) Translates to: PEAGRDSDTTTLAVN*SNRGLGLHVAASYP Trigger: CGGATAGGAGGCTGCTACATGAAGTCCCAGGCCCCTGTTACTCAAGTTCACAGCCAGTGTGGTTGTATCTGAATCCCTGCCAGCCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CAA 90 bp | ACGATGCTGATGAACCCAGGCTCAAGGTTGTCGTCATCACTGGCGTaGCACAGGTACAGGGGGTGGGACTGCATTAGCTTCCCTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TMLMNPGSRLSSSLA*HRYRGWDCISFPSA Trigger: AGCAGAAGGGAAGCTAATGCAGTCCCACCCCCTGTACCTGTGCAACGCCAGTGATGACGACAACCTTGAGCCTGGGTTCATCAGCATCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS TCA 72 bp | CTGGTAAGATGGAGAGGCTGCCGGGGCCTGGGAAAATaGATCTCCCTCTACGATGTTGAACATGCAGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LVRWRGCRGLGK*ISLYDVEHAEG Trigger: CCCCTCTGCATGTTCAACATCGTAGAGGGAGATTCATTTTCCCAGGCCCCGGCAGCCTCTCCATCTTACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS TCA 72 bp | GAAGATGATAGTGGGCGTGGCCAGGATGCTGGCGAATaGGGTGGAGTCTTCTGCCTGGTTCCTGGTAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: EDDSGRGQDAGE*GGVFCLVPGKM Trigger: CATCTTACCAGGAACCAGGCAGAAGACTCCACCTCATTCGCCAGCATCCTGGCCACGCCCACTATCATCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS TCA 72 bp | TGTAAGAGCCCTGGGCCGTTGTGGGTTGGGAAGCATTaGAGAAGCTGTTGGGTTGGGTGTGATGAGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CKSPGPLWVGKH*RSCWVGCDELL Trigger: CAGCAGCTCATCACACCCAACCCAACAGCTTCTTCAATGCTTCCCAACCCACAACGGCCCAGGGCTCTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS TCA 72 bp | CTTCATGTAGCAGCCTCCTATCCGGACCTGGAGGTCTaGACATCAATGGATGAACCTCTGGGGGCCAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LHVAASYPDLEV*TSMDEPLGAKG Trigger: ACCCTTGGCCCCCAGAGGTTCATCCATTGATGTTCAGACCTCCAGGTCCGGATAGGAGGCTGCTACATGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS GCA 72 bp | TCATCACTGGCGTTGCACAGGTACAGGGGGTGGGACTaGATTAGCTTCCCTTCTGCTGGAGTCACTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLALHRYRGWD*ISFPSAGVTSA Trigger: TGCAGAAGTGACTCCAGCAGAAGGGAAGCTAATGCAGTCCCACCCCCTGTACCTGTGCAACGCCAGTGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS CCA 72 bp | TTGTCGTCATCACTGGCGTTGCACAGGTACAGGGGGTaGGACTGCATTAGCTTCCCTTCTGCTGGAGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LSSSLALHRYRG*DCISFPSAGVT Trigger: AGTGACTCCAGCAGAAGGGAAGCTAATGCAGTCCCACCCCCTGTACCTGTGCAACGCCAGTGATGACGACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS CAA 72 bp | CGTTGTGGGTTGGGAAGCATTGAAGAAGCTGTTGGGTaGGGTGTGATGAGCTGCTGGTCAGGGAGAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RCGLGSIEEAVG*GVMSCWSGRDG Trigger: GCCATCTCTCCCTGACCAGCAGCTCATCACACCCAACCCAACAGCTTCTTCAATGCTTCCCAACCCACAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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| CDS CAA 72 bp | ATGAACCCAGGCTCAAGGTTGTCGTCATCACTGGCGTaGCACAGGTACAGGGGGTGGGACTGCATTAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MNPGSRLSSSLA*HRYRGWDCISF Trigger: GAAGCTAATGCAGTCCCACCCCCTGTACCTGTGCAACGCCAGTGATGACGACAACCTTGAGCCTGGGTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092800.12 ENSMUST00000165679.8 |
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| CDS GCA 72 bp | CTGGCAGCACCTGGCAATGTGAGTAAGGACATCTCCTaGCCTCTGGGCTGTCAAAAGTCCACTTGGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: LAAPGNVSKDIS*PLGCQKSTWNV Trigger: GACATTCCAAGTGGACTTTTGACAGCCCAGAGGGCAGGAGATGTCCTTACTCACATTGCCAGGTGCTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040089.5 ENSMUST00000092800.12 ENSMUST00000121782.9 ENSMUST00000165679.8 |
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