Pregenerated sensors for RNF38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035696Ensembl transcript IDs: ENSMUST00000045793.15, ENSMUST00000098098.9, ENSMUST00000102934.9, ENSMUST00000107836.8, ENSMUST00000128426.8, ENSMUST00000136730.8, ENSMUST00000143337.2, ENSMUST00000145760.8
Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGAGGTCGGCAGCCAGGTGTCAGCAGCGGCTGCGAGTGGAAGGTTaGAGCCTGTGTGGCTGCACACGTGCTGAAAACTCACAGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VRSAARCQQRLRVEG*SLCGCTRAENSQRL Trigger: CAGCCTCTGTGAGTTTTCAGCACGTGTGCAGCCACACAGGCTGCAACCTTCCACTCGCAGCCGCTGCTGACACCTGGCTGCCGACCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR TCA 90 bp | GCGGCTGCGAGTGGAAGGTTGCAGCCTGTGTGGCTGCACACGTGCTaGAAACTCACAGAGGCTGCAGAGAAGGCTGAGCACACCGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: AAASGRLQPVWLHTC*KLTEAAEKAEHTEE Trigger: CTCCTCGGTGTGCTCAGCCTTCTCTGCAGCCTCTGTGAGTTTTCAGCACGTGTGCAGCCACACAGGCTGCAACCTTCCACTCGCAGCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR GCA 90 bp | AGGTGTCAGCAGCGGCTGCGAGTGGAAGGTTGCAGCCTGTGTGGCTaGACACGTGCTGAAAACTCACAGAGGCTGCAGAGAAGGCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: RCQQRLRVEGCSLCG*TRAENSQRLQRRLS Trigger: GCTCAGCCTTCTCTGCAGCCTCTGTGAGTTTTCAGCACGTGTGCAGCCACACAGGCTGCAACCTTCCACTCGCAGCCGCTGCTGACACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR TCA 90 bp | GAGGAAGGCCACCACATCCTCTGTCGCCTGGTGCGCCTCCCCACGTaGTGGCCTGTAGACACCTGCACTTCCTCATTGCTAGCTACAAAG | + |
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Preference number: 1 (lower is better) Translates to: EEGHHILCRLVRLPT*WPVDTCTSSLLATK Trigger: CTTTGTAGCTAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGGCGCACCAGGCGACAGAGGATGTGGTGGCCTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR TCA 90 bp | GTTGCCCATGGAGGCCTGAGTGAAGAACACAACCAGAAACCAGGCTaGCTTGGCAGCAGATTTTGCTCTAGTAGAAGCCAAGGAGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: VAHGGLSEEHNQKPG*LGSRFCSSRSQGGK Trigger: CTTGCCTCCTTGGCTTCTACTAGAGCAAAATCTGCTGCCAAGTCAGCCTGGTTTCTGGTTGTGTTCTTCACTCAGGCCTCCATGGGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR TCA 90 bp | GTGGCTGCACACGTGCTGAAAACTCACAGAGGCTGCAGAGAAGGCTaGGCACACCGAGGAGAAAGGAATCCAATGTTGCTGAAAAATGAC | + |
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Preference number: 1 (lower is better) Translates to: VAAHVLKTHRGCREG*AHRGERNPMLLKND Trigger: GTCATTTTTCAGCAACATTGGATTCCTTTCTCCTCGGTGTGCTCAGCCTTCTCTGCAGCCTCTGTGAGTTTTCAGCACGTGTGCAGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR CCA 90 bp | GTGAGAAGGTTAACTGAGGGAAGCGGCAGCAGAGCAGCTCAGGACTaGAGTGTGTCAACTCAATTCACACAGAAACAAACAGTTCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: VRRLTEGSGSRAAQD*SVSTQFTQKQTVLL Trigger: CAGGAGAACTGTTTGTTTCTGTGTGAATTGAGTTGACACACTCCAGTCCTGAGCTGCTCTGCTGCCGCTTCCCTCAGTTAACCTTCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR CCA 90 bp | CAGCTGCCTGAAGCAAAGGAAGAAGGCTTTTCTCATTCCATTCACTaGGCGGGAAGGGGATGGAGTATTCAATGCTTAGAATGGATGCAC | + |
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Preference number: 1 (lower is better) Translates to: QLPEAKEEGFSHSIH*AGRGWSIQCLEWMH Trigger: GTGCATCCATTCTAAGCATTGAATACTCCATCCCCTTCCCGCCCAGTGAATGGAATGAGAAAAGCCTTCTTCCTTTGCTTCAGGCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR TCA 90 bp | ACTGGGAAAATATTCTCAGAAGGAAGCAGGCAGGCAGACGGTGTGTaGAGAGGCCCAAATGTAAGAATGTTAACAATTACATTCCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: TGKIFSEGSRQADGV*RGPNVRMLTITFQG Trigger: TCCCTGGAATGTAATTGTTAACATTCTTACATTTGGGCCTCTTCACACACCGTCTGCCTGCCTGCTTCCTTCTGAGAATATTTTCCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR CCA 90 bp | TTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACTGAGTaGAGCAGTGTCATGTTAGAGCTGTACAGGTATAAAGTTCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: LGKCSPVCVNRMNTE*SSVMLELYRYKVLE Trigger: TTCAAGAACTTTATACCTGTACAGCTCTAACATGACACTGCTCCACTCAGTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCCACGAGCAGGTCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGGTGAGAAGGTTAACTaGGGGAAGCGGCAGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PPRAGLHSLESSVPRPSQGEKVN*GKRQQS Trigger: GCTCTGCTGCCGCTTCCCTCAGTTAACCTTCTCACC...CTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGACCTGCTCGTGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCCACGAGCAGGTCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGAAAGCAAACCAGGCCTaGGAAATGAGCTGTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: PPRAGLHSLESSVPRPSQKANQA*EMSCHC Trigger: ACAGTGACAGCTCATTTCTCAGGCCTGGTTTGCTTT...CTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGACCTGCTCGTGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATAACCAGAAACCAGGCTaGCTTGGCAGCAGATTTTGC | + |
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Preference number: 2 (lower is better) Translates to: SAQPRELRAETFPGDSSHNQKPG*LGSRFC Trigger: GCAAAATCTGCTGCCAAGTCAGCCTGGTTTCTGGTT...ATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATTGTGCGTCAACAGGATaGATACTGAGTGGAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SAQPRELRAETFPGDSSHCASTG*ILSGAV Trigger: CACTGCTCCACTCAGTATTCATCCTGTTGACGCACA...ATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR GCA 90 bp | TGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATCTAGAGAAGGGGACAGCTaGCTGAAGCAAAGGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CTASRAPCRDLPRRQQSSREGDS*LKQRKK Trigger: CTTCTTCCTTTGCTTCAGGCAGCTGTCCCCTTCTCT...AGATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCCACGTGATGGCCTGTAGACACCTGCACTTCCTCATTGCTAGCTACAAACTGCGAGTGGAAGGTTaGAGCCTGTGTGGCTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: PPHVMACRHLHFLIASYKLRVEG*SLCGCT Trigger: TGTGCAGCCACACAGGCTGCAACCTTCCACTCGCAG...TTTGTAGCTAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTGCAGTAGTTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACGGTGTCAGCAGCGGCTaGGAGTGGAAGGTTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LSAVVRKVLTCVRQQDEYGVSSG*EWKVAA Trigger: GGCTGCAACCTTCCACTCGCAGCCGCTGCTGACACC...GTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAACTACTGCAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR GCA 90 bp | CGGTGGGACAGACTAAGGAAGGCCTGGAGATACTGGGAAAATATTCTCAGAAGGCTGCGAGTGGAAGGTTaGAGCCTGTGTGGCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: RWDRLRKAWRYWENILRRLRVEG*SLCGCT Trigger: TGTGCAGCCACACAGGCTGCAACCTTCCACTCGCAG...CCTTCTGAGAATATTTTCCCAGTATCTCCAGGCCTTCCTTAGTCTGTCCCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCCACGTGATGGCCTGTAGACACCTGCACTTCCTCATTGCTAGCTACAAAGCAGTATCAAGTAGGTaGACACTGTCCCTGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: PPHVMACRHLHFLIASYKAVSSR*TLSLSE Trigger: CTCAGACAGGGACAGTGTTCACCTACTTGATACTGC...TTTGTAGCTAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | CGGTGGGACAGACTAAGGAAGGCCTGGAGATACTGGGAAAATATTCTCAGAAGGACCAGGCCTGAGAAATaGGCTGTCACTGTCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: RWDRLRKAWRYWENILRRTRPEK*AVTVTA Trigger: TGCTGTGACAGTGACAGCTCATTTCTCAGGCCTGGT...CCTTCTGAGAATATTTTCCCAGTATCTCCAGGCCTTCCTTAGTCTGTCCCACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGATCGCGATGCACTTCTaGAGCATCAGCTCGGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: AKKGPLTLLVKGGLEATQIAMHF*SISSAN Trigger: ATTTGCCGAGCTGATGCTTCAGAAGTGCATCGCGAT...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATATTCTTGGTACATGCTaGTATATAGGATCTCACACA | + |
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Preference number: 2 (lower is better) Translates to: SAQPRELRAETFPGDSSHILGTC*YIGSHT Trigger: TGTGTGAGATCCTATATACCAGCATGTACCAAGAAT...ATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTGCAGTAGTTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACAAGGGGACAGCTGCCTaGAGCAAAGGAAGAAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LSAVVRKVLTCVRQQDEYKGTAA*SKGRRL Trigger: AAGCCTTCTTCCTTTGCTTCAGGCAGCTGTCCCCTT...GTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAACTACTGCAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | CGGTGGGACAGACTAAGGAAGGCCTGGAGATACTGGGAAAATATTCTCAGAAGGGCAGTATCAAGTAGGTaGACACTGTCCCTGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RWDRLRKAWRYWENILRRAVSSR*TLSLSE Trigger: CTCAGACAGGGACAGTGTTCACCTACTTGATACTGC...CCTTCTGAGAATATTTTCCCAGTATCTCCAGGCCTTCCTTAGTCTGTCCCACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | CGGTGGGACAGACTAAGGAAGGCCTGGAGATACTGGGAAAATATTCTCAGAAGGTGTGCGTCAACAGGATaGATACTGAGTGGAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: RWDRLRKAWRYWENILRRCASTG*ILSGAV Trigger: CACTGCTCCACTCAGTATTCATCCTGTTGACGCACA...CCTTCTGAGAATATTTTCCCAGTATCTCCAGGCCTTCCTTAGTCTGTCCCACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCAGCTCAGGACTGGAGTGTGTCAACTCAATTCACACAGAAACAAACAGTAGAGAAGGGGACAGCTaGCTGAAGCAAAGGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: QSSSGLECVNSIHTETNSREGDS*LKQRKK Trigger: CTTCTTCCTTTGCTTCAGGCAGCTGTCCCCTTCTCT...ACTGTTTGTTTCTGTGTGAATTGAGTTGACACACTCCAGTCCTGAGCTGCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCCACGTGATGGCCTGTAGACACCTGCACTTCCTCATTGCTAGCTACAAAAATCTTCATTTACACTaGAAGTATTCTGGGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: PPHVMACRHLHFLIASYKNLHLH*KYSGHL Trigger: CAGGTGCCCAGAATACTTGCAGTGTAAATGAAGATT...TTTGTAGCTAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCCACGTGATGGCCTGTAGACACCTGCACTTCCTCATTGCTAGCTACAAAGGAATCCAATGTTGCTaGAAAATGACCTCAAACAAT | + |
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Preference number: 2 (lower is better) Translates to: PPHVMACRHLHFLIASYKGIQCC*KMTSNN Trigger: ATTGTTTGAGGTCATTTTTCAGCAACATTGGATTCC...TTTGTAGCTAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR GCA 90 bp | CGGTGGGACAGACTAAGGAAGGCCTGGAGATACTGGGAAAATATTCTCAGAAGGGGATGGAGTATTCAATaGTTAGAATGGATGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: RWDRLRKAWRYWENILRRGWSIQ*LEWMHP Trigger: AGGGTGCATCCATTCTAAGCATTGAATACTCCATCC...CCTTCTGAGAATATTTTCCCAGTATCTCCAGGCCTTCCTTAGTCTGTCCCACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTGCAGTAGTTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACAGAGGCAACAGTGTCTaGAAGAGGACAAAATTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LSAVVRKVLTCVRQQDEYRGNSV*KRTKLC Trigger: GCACAATTTTGTCCTCTTCCAGACACTGTTGCCTCT...GTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAACTACTGCAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR CAA 90 bp | CAAATTGGGCAGGTACGGTTTCCCTTAAGCCATTTATCAACACACTaGGCATGGAACTCGTGGTTACAAGGTAAGACTCTAAGAAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: QIGQVRFPLSHLSTH*AWNSWLQGKTLRSC Trigger: GCAGCTTCTTAGAGTCTTACCTTGTAACCACGAGTTCCATGCCAAGTGTGTTGATAAATGGCTTAAGGGAAACCGTACCTGCCCAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTGAAACCATTGTTGCCCATGGAGGCCTGAGTGAAGAACACAACCAGAAAGGATGGAGTATTCAATaGTTAGAATGGATGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: SPETIVAHGGLSEEHNQKGWSIQ*LEWMHP Trigger: AGGGTGCATCCATTCTAAGCATTGAATACTCCATCC...TTTCTGGTTGTGTTCTTCACTCAGGCCTCCATGGGCAACAATGGTTTCAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTGCAGTAGTTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACCACATTCTTGGTACATaGTGGTATATAGGATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LSAVVRKVLTCVRQQDEYHILGT*WYIGSH Trigger: GTGAGATCCTATATACCAGCATGTACCAAGAATGTG...GTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAACTACTGCAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR CCA 90 bp | CGGTGGGACAGACTAAGGAAGGCCTGGAGATACTGGGAAAATATTCTCAGAAGGATTCTTGGTACATGCTaGTATATAGGATCTCACACA | + |
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Preference number: 2 (lower is better) Translates to: RWDRLRKAWRYWENILRRILGTC*YIGSHT Trigger: TGTGTGAGATCCTATATACCAGCATGTACCAAGAAT...CCTTCTGAGAATATTTTCCCAGTATCTCCAGGCCTTCCTTAGTCTGTCCCACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGGCTCTATATAAGGTAGATTGCTATATCATCTGGAGCTACCACTTTTTACAGCAACACTCGGAATaGTCACACAAAAACCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LKALYKVDCYIIWSYHFLQQHSE*SHKNQG Trigger: TCCCTGGTTTTTGTGTGATCATTCCGAGTGTTGCTG...TAAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR GCA 72 bp | CTCCACGAGCAGGTCTGCACAGCCTCGAGAGCTCCGTaGCGAGACCTTCCCAGGAGACAGCAGTCATCTGCA | + |
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Preference number: 3 (lower is better) Translates to: LHEQVCTASRAP*RDLPRRQQSSA Trigger: TGCAGATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGACCTGCTCGTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR GCA 72 bp | GCAGCCAGGTGTCAGCAGCGGCTGCGAGTGGAAGGTTaGAGCCTGTGTGGCTGCACACGTGCTGAAAACTCA | + |
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Preference number: 3 (lower is better) Translates to: AARCQQRLRVEG*SLCGCTRAENS Trigger: TGAGTTTTCAGCACGTGTGCAGCCACACAGGCTGCAACCTTCCACTCGCAGCCGCTGCTGACACCTGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR TCA 72 bp | CACCACATCCTCTGTCGCCTGGTGCGCCTCCCCACGTaGTGGCCTGTAGACACCTGCACTTCCTCATTGCTA | + |
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Preference number: 3 (lower is better) Translates to: HHILCRLVRLPT*WPVDTCTSSLL Trigger: TAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGGCGCACCAGGCGACAGAGGATGTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR TCA 72 bp | AGTGGAAGGTTGCAGCCTGTGTGGCTGCACACGTGCTaGAAACTCACAGAGGCTGCAGAGAAGGCTGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: SGRLQPVWLHTC*KLTEAAEKAEH Trigger: GTGCTCAGCCTTCTCTGCAGCCTCTGTGAGTTTTCAGCACGTGTGCAGCCACACAGGCTGCAACCTTCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR TCA 72 bp | CACGTGCTGAAAACTCACAGAGGCTGCAGAGAAGGCTaGGCACACCGAGGAGAAAGGAATCCAATGTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: HVLKTHRGCREG*AHRGERNPMLL Trigger: CAGCAACATTGGATTCCTTTCTCCTCGGTGTGCTCAGCCTTCTCTGCAGCCTCTGTGAGTTTTCAGCACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR-3UTR CAA 90 bp | TGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATCTAAGGTCAGTTCCCGTTaGACAGCATTATCTTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: CTASRAPCRDLPRRQQSSKVSSR*TALSFY Trigger: ATAAAAAGATAATGCTGTCAAACGGGAACTGACCTT...AGATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| 3UTR TCA 72 bp | GGAGGCCTGAGTGAAGAACACAACCAGAAACCAGGCTaGCTTGGCAGCAGATTTTGCTCTAGTAGAAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GGLSEEHNQKPG*LGSRFCSSRSQ Trigger: TTGGCTTCTACTAGAGCAAAATCTGCTGCCAAGTCAGCCTGGTTTCTGGTTGTGTTCTTCACTCAGGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR CCA 72 bp | TTAACTGAGGGAAGCGGCAGCAGAGCAGCTCAGGACTaGAGTGTGTCAACTCAATTCACACAGAAACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LTEGSGSRAAQD*SVSTQFTQKQT Trigger: TGTTTGTTTCTGTGTGAATTGAGTTGACACACTCCAGTCCTGAGCTGCTCTGCTGCCGCTTCCCTCAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCCACGTGATGGCCTGTAGACACCTGCACTTCCTCATTGCTAGCTACAAATATTGCACCTTCTTTTaGGAAACAGCAAGTTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PPHVMACRHLHFLIASYKYCTFF*ETASWR Trigger: TCTCCAACTTGCTGTTTCCAAAAAGAAGGTGCAATA...TTTGTAGCTAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCCACGTGATGGCCTGTAGACACCTGCACTTCCTCATTGCTAGCTACAAAGAAAGGAATCCAATGTaGCTGAAAAATGACCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPHVMACRHLHFLIASYKERNPM*LKNDLK Trigger: TTTGAGGTCATTTTTCAGCAACATTGGATTCCTTTC...TTTGTAGCTAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR TCA 72 bp | AAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACTaGGTGGAGCAGTGTCATGTTAGAGCTGTACAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: KVLTCVRQQDEY*VEQCHVRAVQV Trigger: TACCTGTACAGCTCTAACATGACACTGCTCCACTCAGTATTCATCCTGTTGACGCACACAGGTGAGCACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTTAGAATGGATGCACCCTTAGCAATCAGTGTGCAACAGCAAACACAAGGGGCAAAGAAAGGTCCATaGACCCTTTTGGTAAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: MLRMDAPLAISVQQQTQGAKKGP*TLLVKG Trigger: TCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC...CCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCCATTCTAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR TCA 72 bp | ACACATGTAGTTGCACACATTCTCTCACAGATTCACTaGTCACCAGCAGTCATACGCTTCACTCACTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: THVVAHILSQIH*SPAVIRFTHFH Trigger: GTGGAAGTGAGTGAAGCGTATGACTGCTGGTGATCAGTGAATCTGTGAGAGAATGTGTGCAACTACATGTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR CCA 72 bp | TGCTCACCTGTGTGCGTCAACAGGATGAATACTGAGTaGAGCAGTGTCATGTTAGAGCTGTACAGGTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: CSPVCVNRMNTE*SSVMLELYRYK Trigger: TTTATACCTGTACAGCTCTAACATGACACTGCTCCACTCAGTATTCATCCTGTTGACGCACACAGGTGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR-3UTR CAA 90 bp | CGGTGGGACAGACTAAGGAAGGCCTGGAGATACTGGGAAAATATTCTCAGAAGGGAAAGGAATCCAATGTaGCTGAAAAATGACCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RWDRLRKAWRYWENILRRERNPM*LKNDLK Trigger: TTTGAGGTCATTTTTCAGCAACATTGGATTCCTTTC...CCTTCTGAGAATATTTTCCCAGTATCTCCAGGCCTTCCTTAGTCTGTCCCACCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR TCA 72 bp | ATCACGTCCACTGTAATCTTGCAGCAACACTCGGAATaGTCACACAAAAACCAGGGAATGTTAGTGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: ITSTVILQQHSE*SHKNQGMLVHT Trigger: TGTGTGCACTAACATTCCCTGGTTTTTGTGTGATCATTCCGAGTGTTGCTGCAAGATTACAGTGGACGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCGCAAAGAAAGGTCCATaGACCCTTTTGGTAAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PHRLSSMDSPYIHVMRNTAKKGP*TLLVKG Trigger: TCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC...GGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACACATTCTTGGTACATGCTGGTATATAGGATCTCACACACACAGTAGCTACCTAAAGAAAAGGTCTTaGGAGTTCCAATCACACAGT | + |
|
Preference number: 3 (lower is better) Translates to: THILGTCWYIGSHTHSSYLKKRS*EFQSHS Trigger: ACTGTGTGATTGGAACTCCAAAGACCTTTTCTTTAG...GTAGCTACTGTGTGTGTGAGATCCTATATACCAGCATGTACCAAGAATGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR TCA 72 bp | GCTGAGCACACCGAGGAGAAAGGAATCCAATGTTGCTaGAAAATGACCTCAAACAATCTGATTTATGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: AEHTEEKGIQCC*KMTSNNLIYVQ Trigger: TTGAACATAAATCAGATTGTTTGAGGTCATTTTTCAGCAACATTGGATTCCTTTCTCCTCGGTGTGCTCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCACGAGCAGGTCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGGATGTGCTGGCCAGTaGAGAGTGGAAGCCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPRAGLHSLESSVPRPSQGCAGQ*RVEAHG Trigger: CCCATGGGCTTCCACTCTGCACTGGCCAGCACATCC...CTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGACCTGCTCGTGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCACGAGCAGGTCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGAGGGGGCTGCCTATTTaGTGTCATCTCCCATGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPRAGLHSLESSVPRPSQRGLPI*CHLPWS Trigger: CGACCATGGGAGATGACATCAAATAGGCAGCCCCCT...CTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGACCTGCTCGTGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCACGAGCAGGTCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGTCCCTTCTTCCTCGCTaGCGCCTAACAGGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PPRAGLHSLESSVPRPSQSLLPR*RLTGGL Trigger: AAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGA...CTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGACCTGCTCGTGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCACGAGCAGGTCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGCGAACTGAAGGGGGCTaGCTATTTGATGTCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPRAGLHSLESSVPRPSQRTEGG*LFDVIS Trigger: GGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCG...CTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGACCTGCTCGTGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | TCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATGAGCATCCTGGGACCTaGTGTGTACTGCAAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAQPRELRAETFPGDSSHEHPGT*CVLQAG Trigger: CCCTGCTTGCAGTACACAGCAGGTCCCAGGATGCTC...ATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCACGAGCAGGTCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGTCATGTGTCAGGAACTaGAAAGGAGCTGACGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPRAGLHSLESSVPRPSQSCVRN*KGADGG Trigger: ACCTCCGTCAGCTCCTTTGCAGTTCCTGACACATGA...CTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGACCTGCTCGTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCACGAGCAGGTCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGACATGCCTGAAGCATTaGAGGAGGCACACTACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPRAGLHSLESSVPRPSQTCLKH*RRHTTD Trigger: GTCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGT...CTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGACCTGCTCGTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATAGGAGGAGGGGGCATTaGCTGCTGGGATCGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SAQPRELRAETFPGDSSHRRRGH*LLGSVS Trigger: AGATACCGATCCCAGCAGCCAATGCCCCCTCCTCCT...ATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | TCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATGAAGGTTGGGCCCACTaGAGGTGGTACTGGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAQPRELRAETFPGDSSHEGWAH*RWYWKH Trigger: ATGCTTCCAGTACCACCTGCAGTGGGCCCAACCTTC...ATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | TGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATCTGGGGGCATTGGCTGCTaGGATCGGTATCTACTACGT | + |
|
Preference number: 4 (lower is better) Translates to: CTASRAPCRDLPRRQQSSGGIGC*DRYLLR Trigger: ACGTAGTAGATACCGATCCCAGCAGCCAATGCCCCC...AGATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | TGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATCTCCAAAGGACACCTCCTaGTGCAAAGGGTCATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTASRAPCRDLPRRQQSSPKDTS*CKGSCV Trigger: GACACATGACCCTTTGCATCAGGAGGTGTCCTTTGG...AGATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | TGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATCTGAGGACTTCTTCTGTTaGGTGCAGGTGTGTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTASRAPCRDLPRRQQSSEDFFC*VQVCYS Trigger: GCTGTAACACACCTGCACGCAACAGAAGAAGTCCTC...AGATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | TCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATGAGGACTTCTTCTGTTaGGTGCAGGTGTGTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAQPRELRAETFPGDSSHEDFFC*VQVCYS Trigger: GCTGTAACACACCTGCACGCAACAGAAGAAGTCCTC...ATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGCTGGCCAGTGCAGAGTaGAAGCCCATGGGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKKGPLTLLVKGGLEATQLASAE*KPMGCH Trigger: GTGGCACCCCATGGGCTTCCACTCTGCACTGGCCAG...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | TGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATCTTCGAGGTTCCTCTATTaGTTGCTGCTGTGCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTASRAPCRDLPRRQQSSSRFLY*LLLCIR Trigger: CCTTATGCACAGCAGCAAGCAATAGAGGAACCTCGA...AGATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCACGTGATGGCCTGTAGACACCTGCACTTCCTCATTGCTAGCTACAAAGGACCTGCTGTGTACTaGAAGCAGGGATGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPHVMACRHLHFLIASYKGPAVY*KQGCAG Trigger: GCCAGCACATCCCTGCTTGCAGTACACAGCAGGTCC...TTTGTAGCTAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCACGTGATGGCCTGTAGACACCTGCACTTCCTCATTGCTAGCTACAAATCCCTTCTTCCTCGCTaGCGCCTAACAGGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PPHVMACRHLHFLIASYKSLLPR*RLTGGL Trigger: AAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGA...TTTGTAGCTAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGATGTGCTGGCCAGTaGAGAGTGGAAGCCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: CKERSIDPFGKGRAGSHTGCAGQ*RVEAHG Trigger: CCCATGGGCTTCCACTCTGCACTGGCCAGCACATCC...TGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCACGTGATGGCCTGTAGACACCTGCACTTCCTCATTGCTAGCTACAAAAACCACCGAGCATCCTaGGACCTGCTGTGTACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPHVMACRHLHFLIASYKNHRAS*DLLCTA Trigger: TGCAGTACACAGCAGGTCCCAGGATGCTCGGTGGTT...TTTGTAGCTAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCACGTGATGGCCTGTAGACACCTGCACTTCCTCATTGCTAGCTACAAAGACAAATTGGCCTGGTaGTGGCAAGTGGGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PPHVMACRHLHFLIASYKDKLAW*WQVGRM Trigger: CATCCTCCCCACTTGCCACCACCAGGCCAATTTGTC...TTTGTAGCTAGCAATGAGGAAGTGCAGGTGTCTACAGGCCATCACGTGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGAGGAGGAGGGGGCATTaGCTGCTGGGATCGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: AKKGPLTLLVKGGLEATQRRRGH*LLGSVS Trigger: AGATACCGATCCCAGCAGCCAATGCCCCCTCCTCCT...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | TGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATCTTCTAAGAAGCTGCCTTaGCTCAAAATCACACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTASRAPCRDLPRRQQSSSKKLP*LKITHA Trigger: TGCATGTGTGATTTTGAGTCAAGGCAGCTTCTTAGA...AGATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTGGACCTGCTGTGTACTaGAAGCAGGGATGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKGPLTLLVKGGLEATQVGPAVY*KQGCAG Trigger: GCCAGCACATCCCTGCTTGCAGTACACAGCAGGTCC...AACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGACCTGCTGTGTACTaGAAGCAGGGATGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CKERSIDPFGKGRAGSHTGPAVY*KQGCAG Trigger: GCCAGCACATCCCTGCTTGCAGTACACAGCAGGTCC...TGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGAGCATCCTGGGACCTaGTGTGTACTGCAAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CKERSIDPFGKGRAGSHTEHPGT*CVLQAG Trigger: CCCTGCTTGCAGTACACAGCAGGTCCCAGGATGCTC...TGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGAAGGTTGGGCCCACTaGAGGTGGTACTGGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKKGPLTLLVKGGLEATQEGWAH*RWYWKH Trigger: ATGCTTCCAGTACCACCTGCAGTGGGCCCAACCTTC...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTGAATCGCGATGCACTTCTGAAGCATCAGCTCGGCAAATTGGGCAGGTAGGGGGCATTGGCTGCTaGGATCGGTATCTACTACGT | + |
|
Preference number: 4 (lower is better) Translates to: HSESRCTSEASARQIGQVGGIGC*DRYLLR Trigger: ACGTAGTAGATACCGATCCCAGCAGCCAATGCCCCC...TACCTGCCCAATTTGCCGAGCTGATGCTTCAGAAGTGCATCGCGATTCAGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCAGGAGGAGGGGGCATTaGCTGCTGGGATCGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: TQCKERSIDPFGKGRAGSRRRGH*LLGSVS Trigger: AGATACCGATCCCAGCAGCCAATGCCCCCTCCTCCT...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATTTGGCATGGAACTCGTaGTTACAAGGTAAGACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SAQPRELRAETFPGDSSHLAWNS*LQGKTL Trigger: TAGAGTCTTACCTTGTAACCACGAGTTCCATGCCAA...ATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | CGGTGGGACAGACTAAGGAAGGCCTGGAGATACTGGGAAAATATTCTCAGAAGGAGGGGGCTGCCTATTTaGTGTCATCTCCCATGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RWDRLRKAWRYWENILRRRGLPI*CHLPWS Trigger: CGACCATGGGAGATGACATCAAATAGGCAGCCCCCT...CCTTCTGAGAATATTTTCCCAGTATCTCCAGGCCTTCCTTAGTCTGTCCCACCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCAGGGGGCTGCCTATTTaGTGTCATCTCCCATGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TQCKERSIDPFGKGRAGSRGLPI*CHLPWS Trigger: CGACCATGGGAGATGACATCAAATAGGCAGCCCCCT...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | GTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGATCCCTTCTTCCTCGCTaGCGCCTAACAGGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: VTQCKERSIDPFGKGRAGSLLPR*RLTGGL Trigger: AAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGA...TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCTGCAGAGGCGATCGTaGCTGCTGTGTTTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQCKERSIDPFGKGRAGSLQRRS*LLCLER Trigger: CCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAG...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTGCAGTAGTTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACGGACCTGCTGTGTACTaGAAGCAGGGATGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAVVRKVLTCVRQQDEYGPAVY*KQGCAG Trigger: GCCAGCACATCCCTGCTTGCAGTACACAGCAGGTCC...GTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAACTACTGCAGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCTGCAGTAGTTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACGAGCATCCTGGGACCTaGTGTGTACTGCAAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAVVRKVLTCVRQQDEYEHPGT*CVLQAG Trigger: CCCTGCTTGCAGTACACAGCAGGTCCCAGGATGCTC...GTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAACTACTGCAGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | CGGTGGGACAGACTAAGGAAGGCCTGGAGATACTGGGAAAATATTCTCAGAAGGGAAGGTTGGGCCCACTaGAGGTGGTACTGGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RWDRLRKAWRYWENILRREGWAH*RWYWKH Trigger: ATGCTTCCAGTACCACCTGCAGTGGGCCCAACCTTC...CCTTCTGAGAATATTTTCCCAGTATCTCCAGGCCTTCCTTAGTCTGTCCCACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | CACTCTGAATCGCGATGCACTTCTGAAGCATCAGCTCGGCAAATTGGGCAGGTAGATACATTCGGAGGGTaGAAGGCTCGAGGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSESRCTSEASARQIGQVDTFGG*KARGSS Trigger: AGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATC...TACCTGCCCAATTTGCCGAGCTGATGCTTCAGAAGTGCATCGCGATTCAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTAACCACCGAGCATCCTaGGACCTGCTGTGTACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KKGPLTLLVKGGLEATQVNHRAS*DLLCTA Trigger: TGCAGTACACAGCAGGTCCCAGGATGCTCGGTGGTT...AACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCGACAAATTGGCCTGGTaGTGGCAAGTGGGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQCKERSIDPFGKGRAGSDKLAW*WQVGRM Trigger: CATCCTCCCCACTTGCCACCACCAGGCCAATTTGTC...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | AATCGCGATGCACTTCTGAAGCATCAGCTCGGCAAATTGGGCAGGTACGGTTTCTGGAAAGGGACAAATTaGCCTGGTGGTGGCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRDALLKHQLGKLGRYGFWKGTN*PGGGKW Trigger: CCACTTGCCACCACCAGGCCAATTTGTCCCTTTCCA...GAAACCGTACCTGCCCAATTTGCCGAGCTGATGCTTCAGAAGTGCATCGCGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTGAATCGCGATGCACTTCTGAAGCATCAGCTCGGCAAATTGGGCAGGTACGTATGGTAGTAAGCTaGGATGGTAAGGAGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSESRCTSEASARQIGQVRMVVS*DGKEEG Trigger: CCCCTCCTCCTTACCATCCCAGCTTACTACCATACG...TACCTGCCCAATTTGCCGAGCTGATGCTTCAGAAGTGCATCGCGATTCAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | AGCATCAGCTCGGCAAATTGGGCAGGTACGGTTTCCCTTAAGCCATTTATCAACAGGGGGCTGCCTATTTaGTGTCATCTCCCATGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SISSANWAGTVSLKPFINRGLPI*CHLPWS Trigger: CGACCATGGGAGATGACATCAAATAGGCAGCCCCCT...GTTGATAAATGGCTTAAGGGAAACCGTACCTGCCCAATTTGCCGAGCTGATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTGCAGTAGTTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACTCCCTTCTTCCTCGCTaGCGCCTAACAGGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSAVVRKVLTCVRQQDEYSLLPR*RLTGGL Trigger: AAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGA...GTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAACTACTGCAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCCAAAGGACACCTCCTaGTGCAAAGGGTCATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQCKERSIDPFGKGRAGSPKDTS*CKGSCV Trigger: GACACATGACCCTTTGCATCAGGAGGTGTCCTTTGG...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGCTCGGCAAATTGGGCAGGTACGGTTTCCCTTAAGCCATTTATCAACACAGAGCATCCTGGGACCTaGTGTGTACTGCAAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISSANWAGTVSLKPFINTEHPGT*CVLQAG Trigger: CCCTGCTTGCAGTACACAGCAGGTCCCAGGATGCTC...TGTGTTGATAAATGGCTTAAGGGAAACCGTACCTGCCCAATTTGCCGAGCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCAGCTCGGCAAATTGGGCAGGTACGGTTTCCCTTAAGCCATTTATCAACGGAGGGGGCATTGGCTaGTGGGATCGGTATCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: SISSANWAGTVSLKPFINGGGIG*WDRYLL Trigger: TAGTAGATACCGATCCCAGCAGCCAATGCCCCCTCC...GTTGATAAATGGCTTAAGGGAAACCGTACCTGCCCAATTTGCCGAGCTGATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTGATACATTCGGAGGGTaGAAGGCTCGAGGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KERSIDPFGKGRAGSHTGDTFGG*KARGSS Trigger: AGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATC...ACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTGATACATTCGGAGGGTaGAAGGCTCGAGGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKGPLTLLVKGGLEATQVDTFGG*KARGSS Trigger: AGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATC...AACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | GTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAGATACATTCGGAGGGTaGAAGGCTCGAGGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTQCKERSIDPFGKGRAGDTFGG*KARGSS Trigger: AGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATC...TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTGGAAGCCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGCAAGCAGGGATGTGCTaGCCAGTGCAGAGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGWKPHRLSSMDSPYIHVQAGMC*PVQSGS Trigger: GCTTCCACTCTGCACTGGCCAGCACATCCCTGCTTG...CACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGGCTTCCAGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTGGAAAGGGACAAATTaGCCTGGTGGTGGCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KERSIDPFGKGRAGSHTGWKGTN*PGGGKW Trigger: CCACTTGCCACCACCAGGCCAATTTGTCCCTTTCCA...ACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGCAGTAGTTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACGGGGGCATTGGCTGCTaGGATCGGTATCTACTACGT | + |
|
Preference number: 4 (lower is better) Translates to: LSAVVRKVLTCVRQQDEYGGIGC*DRYLLR Trigger: ACGTAGTAGATACCGATCCCAGCAGCCAATGCCCCC...GTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAACTACTGCAGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | CGGTGGGACAGACTAAGGAAGGCCTGGAGATACTGGGAAAATATTCTCAGAAGGTTCAAAGCTGAAGGTTaGGCCCACTGCAGGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RWDRLRKAWRYWENILRRFKAEG*AHCRWY Trigger: GTACCACCTGCAGTGGGCCCAACCTTCAGCTTTGAA...CCTTCTGAGAATATTTTCCCAGTATCTCCAGGCCTTCCTTAGTCTGTCCCACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTTCAAAGCTGAAGGTTaGGCCCACTGCAGGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KERSIDPFGKGRAGSHTGFKAEG*AHCRWY Trigger: GTACCACCTGCAGTGGGCCCAACCTTCAGCTTTGAA...ACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTTAGAATGGATGCACCCTTAGCAATCAGTGTGCAACAGCAAACACAAGGGAGGGGGCTGCCTATTTaGTGTCATCTCCCATGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MLRMDAPLAISVQQQTQGRGLPI*CHLPWS Trigger: CGACCATGGGAGATGACATCAAATAGGCAGCCCCCT...CCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCCATTCTAAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTACAGCGTTCCCCTaGGAAGTGATGTTGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKKGPLTLLVKGGLEATQVTAFP*EVMLIW Trigger: CCAAATCAACATCACTTCTCAGGGGAACGCTGTAAC...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTTAGAATGGATGCACCCTTAGCAATCAGTGTGCAACAGCAAACACAAGGGCTGCAGAGGCGATCGTaGCTGCTGTGTTTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLRMDAPLAISVQQQTQGLQRRS*LLCLER Trigger: CCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAG...CCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCCATTCTAAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | GAGGGCTGGAAGCCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGCTGCAGAGGCGATCGTaGCTGCTGTGTTTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGWKPHRLSSMDSPYIHVLQRRS*LLCLER Trigger: CCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAG...CACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGGCTTCCAGCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | AGCATCAGCTCGGCAAATTGGGCAGGTACGGTTTCCCTTAAGCCATTTATCAACCCAAAGGACACCTCCTaGTGCAAAGGGTCATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SISSANWAGTVSLKPFINPKDTS*CKGSCV Trigger: GACACATGACCCTTTGCATCAGGAGGTGTCCTTTGG...GTTGATAAATGGCTTAAGGGAAACCGTACCTGCCCAATTTGCCGAGCTGATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | GTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGACATCTAATTCAAAGCTaGAGGTTGGGCCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTQCKERSIDPFGKGRAGHLIQS*RLGPLQ Trigger: CTGCAGTGGGCCCAACCTTCAGCTTTGAATTAGATG...TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTCATCTAATTCAAAGCTaGAGGTTGGGCCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KERSIDPFGKGRAGSHTGHLIQS*RLGPLQ Trigger: CTGCAGTGGGCCCAACCTTCAGCTTTGAATTAGATG...ACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | GTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAATCGCGATGCACTTCTaGAGCATCAGCTCGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VTQCKERSIDPFGKGRAGIAMHF*SISSAN Trigger: ATTTGCCGAGCTGATGCTTCAGAAGTGCATCGCGAT...TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTCGAACTGAAGGGGGCTaGCTATTTGATGTCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KKGPLTLLVKGGLEATQVRTEGG*LFDVIS Trigger: GGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCG...AACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | CACTCTGAATCGCGATGCACTTCTGAAGCATCAGCTCGGCAAATTGGGCAGGTAACTTCTTCTGTTGCGTaGAGGTGTGTTACAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSESRCTSEASARQIGQVTSSVA*RCVTAF Trigger: GAACGCTGTAACACACCTGCACGCAACAGAAGAAGT...TACCTGCCCAATTTGCCGAGCTGATGCTTCAGAAGTGCATCGCGATTCAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGAGGACTTCTTCTGTTaGGTGCAGGTGTGTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CKERSIDPFGKGRAGSHTEDFFC*VQVCYS Trigger: GCTGTAACACACCTGCACGCAACAGAAGAAGTCCTC...TGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCAGCTCAGGACTGGAGTGTGTCAACTCAATTCACACAGAAACAAACAGTGGAGGGGGCATTGGCTaGTGGGATCGGTATCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: QSSSGLECVNSIHTETNSGGGIG*WDRYLL Trigger: TAGTAGATACCGATCCCAGCAGCCAATGCCCCCTCC...ACTGTTTGTTTCTGTGTGAATTGAGTTGACACACTCCAGTCCTGAGCTGCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGCACTCTGAATCGCGATaGACTTCTGAAGCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKKGPLTLLVKGGLEATQHSESR*TSEASA Trigger: AGCTGATGCTTCAGAAGTGCATCGCGATTCAGAGTG...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCAAGCAGGGATGTGCTaGCCAGTGCAGAGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGQAGMC*PVQSGS Trigger: GCTTCCACTCTGCACTGGCCAGCACATCCCTGCTTG...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTGGAAGCCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGAACCACCGAGCATCCTaGGACCTGCTGTGTACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGWKPHRLSSMDSPYIHVNHRAS*DLLCTA Trigger: TGCAGTACACAGCAGGTCCCAGGATGCTCGGTGGTT...CACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGGCTTCCAGCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | GCAAATTGGGCAGGTACGGTTTCCCTTAAGCCATTTATCAACACACTTGGCATGAACCACCGAGCATCCTaGGACCTGCTGTGTACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ANWAGTVSLKPFINTLGMNHRAS*DLLCTA Trigger: TGCAGTACACAGCAGGTCCCAGGATGCTCGGTGGTT...CATGCCAAGTGTGTTGATAAATGGCTTAAGGGAAACCGTACCTGCCCAATTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | TGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAACATGCCTGAAGCATTaGAGGAGGCACACTACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CKERSIDPFGKGRAGSHTTCLKH*RRHTTD Trigger: GTCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGT...TGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTTAGAATGGATGCACCCTTAGCAATCAGTGTGCAACAGCAAACACAAGGGGGGGGCATTGGCTGCTaGGATCGGTATCTACTACGT | + |
|
Preference number: 4 (lower is better) Translates to: MLRMDAPLAISVQQQTQGGGIGC*DRYLLR Trigger: ACGTAGTAGATACCGATCCCAGCAGCCAATGCCCCC...CCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCCATTCTAAGCAT 50% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGAAACCATTGTTGCCCATGGAGGCCTGAGTGAAGAACACAACCAGAAACGTATGGTAGTAAGCTaGGATGGTAAGGAGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPETIVAHGGLSEEHNQKRMVVS*DGKEEG Trigger: CCCCTCCTCCTTACCATCCCAGCTTACTACCATACG...TTTCTGGTTGTGTTCTTCACTCAGGCCTCCATGGGCAACAATGGTTTCAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCGTCTGCTCTGACTGGTaGTTGCTAGGATTGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQCKERSIDPFGKGRAGSVCSDW*LLGLNL Trigger: CAGGTTCAATCCTAGCAACCACCAGTCAGAGCAGAC...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTATCAGCTCGGCAAATTaGGCAGGTACGGTTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKGPLTLLVKGGLEATQVISSAN*AGTVSL Trigger: AAGGGAAACCGTACCTGCCCAATTTGCCGAGCTGAT...AACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR TCA 90 bp | GTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAGTTACAGCGTTCCCCTaGGAAGTGATGTTGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTQCKERSIDPFGKGRAGVTAFP*EVMLIW Trigger: CCAAATCAACATCACTTCTCAGGGGAACGCTGTAAC...TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCGTTACAGCGTTCCCCTaGGAAGTGATGTTGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQCKERSIDPFGKGRAGSVTAFP*EVMLIW Trigger: CCAAATCAACATCACTTCTCAGGGGAACGCTGTAAC...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGCAGAGGCGATCGTaGCTGCTGTGTTTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGLQRRS*LLCLER Trigger: CCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAG...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCTGAAACCATTGTTGCCCATGGAGGCCTGAGTGAAGAACACAACCAGAAACATCTAATTCAAAGCTaGAGGTTGGGCCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPETIVAHGGLSEEHNQKHLIQS*RLGPLQ Trigger: CTGCAGTGGGCCCAACCTTCAGCTTTGAATTAGATG...TTTCTGGTTGTGTTCTTCACTCAGGCCTCCATGGGCAACAATGGTTTCAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | AGCATCAGCTCGGCAAATTGGGCAGGTACGGTTTCCCTTAAGCCATTTATCAACCGAACTGAAGGGGGCTaGCTATTTGATGTCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SISSANWAGTVSLKPFINRTEGG*LFDVIS Trigger: GGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCG...GTTGATAAATGGCTTAAGGGAAACCGTACCTGCCCAATTTGCCGAGCTGATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | GTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAACTTCTTCTGTTGCGTaGAGGTGTGTTACAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTQCKERSIDPFGKGRAGTSSVA*RCVTAF Trigger: GAACGCTGTAACACACCTGCACGCAACAGAAGAAGT...TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCTCGAGGTTCCTCTATTaGTTGCTGCTGTGCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQCKERSIDPFGKGRAGSSRFLY*LLLCIR Trigger: CCTTATGCACAGCAGCAAGCAATAGAGGAACCTCGA...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | GTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGATCGAGGTTCCTCTATTaGTTGCTGCTGTGCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTQCKERSIDPFGKGRAGSRFLY*LLLCIR Trigger: CCTTATGCACAGCAGCAAGCAATAGAGGAACCTCGA...TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGGGAGGGGGCATTGGCTaGTGGGATCGGTATCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGGGGIG*WDRYLL Trigger: TAGTAGATACCGATCCCAGCAGCCAATGCCCCCTCC...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGACTACACACAAAGTCTaGTCTGACTGGTGGTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AKKGPLTLLVKGGLEATQTTHKV*SDWWLL Trigger: TAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGT...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTCACTCTGAATCGCGATaGACTTCTGAAGCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KERSIDPFGKGRAGSHTGHSESR*TSEASA Trigger: AGCTGATGCTTCAGAAGTGCATCGCGATTCAGAGTG...ACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCTTAGGCCTGGCCAGTGCAGAGTaGAAGCCCATGGGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPYIHVMRNTQTKFVLLGLASAE*KPMGCH Trigger: GTGGCACCCCATGGGCTTCCACTCTGCACTGGCCAG...GCCTAAGAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGAACCACCGAGCATCCTaGGACCTGCTGTGTACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGNHRAS*DLLCTA Trigger: TGCAGTACACAGCAGGTCCCAGGATGCTCGGTGGTT...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTGGAAGCCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGTGGAAAGGGACAAATTaGCCTGGTGGTGGCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGWKPHRLSSMDSPYIHVWKGTN*PGGGKW Trigger: CCACTTGCCACCACCAGGCCAATTTGTCCCTTTCCA...CACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGGCTTCCAGCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTTAGAATGGATGCACCCTTAGCAATCAGTGTGCAACAGCAAACACAAGGGCGTATGGTAGTAAGCTaGGATGGTAAGGAGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MLRMDAPLAISVQQQTQGRMVVS*DGKEEG Trigger: CCCCTCCTCCTTACCATCCCAGCTTACTACCATACG...CCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCCATTCTAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTGGAAGCCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGTTCAAAGCTGAAGGTTaGGCCCACTGCAGGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EGWKPHRLSSMDSPYIHVFKAEG*AHCRWY Trigger: GTACCACCTGCAGTGGGCCCAACCTTCAGCTTTGAA...CACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGGCTTCCAGCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTTAGAATGGATGCACCCTTAGCAATCAGTGTGCAACAGCAAACACAAGGGTTCAAAGCTGAAGGTTaGGCCCACTGCAGGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MLRMDAPLAISVQQQTQGFKAEG*AHCRWY Trigger: GTACCACCTGCAGTGGGCCCAACCTTCAGCTTTGAA...CCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCCATTCTAAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGCAGTAGTTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACGTCTGCTCTGACTGGTaGTTGCTAGGATTGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAVVRKVLTCVRQQDEYVCSDW*LLGLNL Trigger: CAGGTTCAATCCTAGCAACCACCAGTCAGAGCAGAC...GTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAACTACTGCAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | CCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCTCCCTTCTTCCTCGCTaGCGCCTAACAGGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PHRLSSMDSPYIHVMRNTSLLPR*RLTGGL Trigger: AAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGA...GGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTAAAACTGCCTACTTaGAGATGTTCTCCTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKKGPLTLLVKGGLEATQVKLPT*RCSPKS Trigger: GCTCTTAGGAGAACATCTTCAAGTAGGCAGTTTTAC...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGCAGCTCAGGACTGGAGTGTGTCAACTCAATTCACACAGAAACAAACAGTATCGCGATGCACTTCTaGAGCATCAGCTCGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSSSGLECVNSIHTETNSIAMHF*SISSAN Trigger: ATTTGCCGAGCTGATGCTTCAGAAGTGCATCGCGAT...ACTGTTTGTTTCTGTGTGAATTGAGTTGACACACTCCAGTCCTGAGCTGCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCTTAGGCGGATGTGCTGGCCAGTaGAGAGTGGAAGCCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPYIHVMRNTQTKFVLLGGCAGQ*RVEAHG Trigger: CCCATGGGCTTCCACTCTGCACTGGCCAGCACATCC...GCCTAAGAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAGGACCTGCTGTGTACTaGAAGCAGGGATGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQGPAVY*KQGCAG Trigger: GCCAGCACATCCCTGCTTGCAGTACACAGCAGGTCC...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | TTGATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGAGCATCCTGGGACCTaGTGTGTACTGCAAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LIKSHSAKKGPLTLLVKGEHPGT*CVLQAG Trigger: CCCTGCTTGCAGTACACAGCAGGTCCCAGGATGCTC...TCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTTAGAATGGATGCACCCTTAGCAATCAGTGTGCAACAGCAAACACAAGGGTCATGTGTCAGGAACTaGAAAGGAGCTGACGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MLRMDAPLAISVQQQTQGSCVRN*KGADGG Trigger: ACCTCCGTCAGCTCCTTTGCAGTTCCTGACACATGA...CCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCCATTCTAAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | CCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCGGAGGGGGCATTGGCTaGTGGGATCGGTATCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: PHRLSSMDSPYIHVMRNTGGGIG*WDRYLL Trigger: TAGTAGATACCGATCCCAGCAGCCAATGCCCCCTCC...GGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTAAGCTGTTCAATATCTaGTTTAGTCAGTCCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKGPLTLLVKGGLEATQVKLFNI*FSQSPR Trigger: CCTCGGGGACTGACTAAAGCAGATATTGAACAGCTT...AACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGGCTCTATATAAGGTAGATTGCTATATCATCTGGAGCTACCACTTTTTACTGGCCAGTGCAGAGTaGAAGCCCATGGGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKALYKVDCYIIWSYHFLLASAE*KPMGCH Trigger: GTGGCACCCCATGGGCTTCCACTCTGCACTGGCCAG...TAAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | ATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCCTGGCCAGTGCAGAGTaGAAGCCCATGGGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MDSPYIHVMRNTQTKFVLLASAE*KPMGCH Trigger: GTGGCACCCCATGGGCTTCCACTCTGCACTGGCCAG...GAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAACAAGCAGGGATGTGCTaGCCAGTGCAGAGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQQAGMC*PVQSGS Trigger: GCTTCCACTCTGCACTGGCCAGCACATCCCTGCTTG...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | TTGATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGACAAGCAGGGATGTGCTaGCCAGTGCAGAGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIKSHSAKKGPLTLLVKGQAGMC*PVQSGS Trigger: GCTTCCACTCTGCACTGGCCAGCACATCCCTGCTTG...TCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | TTGATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAAGGAGGAGGGGGCATTaGCTGCTGGGATCGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LIKSHSAKKGPLTLLVKGRRRGH*LLGSVS Trigger: AGATACCGATCCCAGCAGCCAATGCCCCCTCCTCCT...TCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCAAAGTCTGCTCTGACTaGTGGTTGCTAGGATTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TQCKERSIDPFGKGRAGSKVCSD*WLLGLN Trigger: GTTCAATCCTAGCAACCACCAGTCAGAGCAGACTTT...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | GTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAAAGTCTGCTCTGACTaGTGGTTGCTAGGATTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VTQCKERSIDPFGKGRAGKVCSD*WLLGLN Trigger: GTTCAATCCTAGCAACCACCAGTCAGAGCAGACTTT...TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTGGAAGCCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATCAGCTCGGCAAATTaGGCAGGTACGGTTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGWKPHRLSSMDSPYIHVISSAN*AGTVSL Trigger: AAGGGAAACCGTACCTGCCCAATTTGCCGAGCTGAT...CACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGGCTTCCAGCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTTAGAATGGATGCACCCTTAGCAATCAGTGTGCAACAGCAAACACAAGGGATCAGCTCGGCAAATTaGGCAGGTACGGTTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLRMDAPLAISVQQQTQGISSAN*AGTVSL Trigger: AAGGGAAACCGTACCTGCCCAATTTGCCGAGCTGAT...CCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCCATTCTAAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | AAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTGTAAAACTGCCTACTTaGAGATGTTCTCCTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KERSIDPFGKGRAGSHTGVKLPT*RCSPKS Trigger: GCTCTTAGGAGAACATCTTCAAGTAGGCAGTTTTAC...ACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | GTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAGTAAAACTGCCTACTTaGAGATGTTCTCCTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTQCKERSIDPFGKGRAGVKLPT*RCSPKS Trigger: GCTCTTAGGAGAACATCTTCAAGTAGGCAGTTTTAC...TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCGTAAAACTGCCTACTTaGAGATGTTCTCCTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQCKERSIDPFGKGRAGSVKLPT*RCSPKS Trigger: GCTCTTAGGAGAACATCTTCAAGTAGGCAGTTTTAC...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCTCTAAGAAGCTGCCTTaGCTCAAAATCACACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQCKERSIDPFGKGRAGSSKKLP*LKITHA Trigger: TGCATGTGTGATTTTGAGTCAAGGCAGCTTCTTAGA...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR TCA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGATCGCGATGCACTTCTaGAGCATCAGCTCGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGIAMHF*SISSAN Trigger: ATTTGCCGAGCTGATGCTTCAGAAGTGCATCGCGAT...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTTAGAATGGATGCACCCTTAGCAATCAGTGTGCAACAGCAAACACAAGGGACTTCTTCTGTTGCGTaGAGGTGTGTTACAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLRMDAPLAISVQQQTQGTSSVA*RCVTAF Trigger: GAACGCTGTAACACACCTGCACGCAACAGAAGAAGT...CCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCCATTCTAAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGGAGGACTTCTTCTGTTaGGTGCAGGTGTGTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGEDFFC*VQVCYS Trigger: GCTGTAACACACCTGCACGCAACAGAAGAAGTCCTC...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | CGGTGGGACAGACTAAGGAAGGCCTGGAGATACTGGGAAAATATTCTCAGAAGGTATTGCTTGCTGCTGTaGATAAGGGAGATGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: RWDRLRKAWRYWENILRRYCLLL*IREMVI Trigger: TATCACCATCTCCCTTATGCACAGCAGCAAGCAATA...CCTTCTGAGAATATTTTCCCAGTATCTCCAGGCCTTCCTTAGTCTGTCCCACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| CDS-3UTR GCA 90 bp | TGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACATATTGCTTGCTGCTGTaGATAAGGGAGATGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: CKERSIDPFGKGRAGSHTYCLLL*IREMVI Trigger: TATCACCATCTCCCTTATGCACAGCAGCAAGCAATA...TGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | ATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCGGATGTGCTGGCCAGTaGAGAGTGGAAGCCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: MDSPYIHVMRNTQTKFVLGCAGQ*RVEAHG Trigger: CCCATGGGCTTCCACTCTGCACTGGCCAGCACATCC...GAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGGCTCTATATAAGGTAGATTGCTATATCATCTGGAGCTACCACTTTTTAGGATGTGCTGGCCAGTaGAGAGTGGAAGCCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKALYKVDCYIIWSYHFLGCAGQ*RVEAHG Trigger: CCCATGGGCTTCCACTCTGCACTGGCCAGCACATCC...TAAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | TTGATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGAAGGTTGGGCCCACTaGAGGTGGTACTGGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIKSHSAKKGPLTLLVKGEGWAH*RWYWKH Trigger: ATGCTTCCAGTACCACCTGCAGTGGGCCCAACCTTC...TCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGAAGACTCTAAGAAGCTaGCTTGACTCAAAATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: AKKGPLTLLVKGGLEATQKTLRS*LDSKSH Trigger: GTGTGATTTTGAGTCAAGGCAGCTTCTTAGAGTCTT...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAGACAAATTGGCCTGGTaGTGGCAAGTGGGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQDKLAW*WQVGRM Trigger: CATCCTCCCCACTTGCCACCACCAGGCCAATTTGTC...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | TTGATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGACAAATTGGCCTGGTaGTGGCAAGTGGGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LIKSHSAKKGPLTLLVKGDKLAW*WQVGRM Trigger: CATCCTCCCCACTTGCCACCACCAGGCCAATTTGTC...TCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | TTGATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGGGCATTGGCTGCTaGGATCGGTATCTACTACGT | + |
|
Preference number: 4 (lower is better) Translates to: LIKSHSAKKGPLTLLVKGGGIGC*DRYLLR Trigger: ACGTAGTAGATACCGATCCCAGCAGCCAATGCCCCC...TCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | CCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCGTATGGTAGTAAGCTaGGATGGTAAGGAGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHRLSSMDSPYIHVMRNTRMVVS*DGKEEG Trigger: CCCCTCCTCCTTACCATCCCAGCTTACTACCATACG...GGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTTGGCATGGAACTCGTaGTTACAAGGTAAGACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KERSIDPFGKGRAGSHTGLAWNS*LQGKTL Trigger: TAGAGTCTTACCTTGTAACCACGAGTTCCATGCCAA...ACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR GCA 90 bp | CCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCGAACTGAAGGGGGCTaGCTATTTGATGTCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PHRLSSMDSPYIHVMRNTRTEGG*LFDVIS Trigger: GGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCG...GGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCAGCTCGGCAAATTGGGCAGGTACGGTTTCCCTTAAGCCATTTATCAACTATTGCTTGCTGCTGTaGATAAGGGAGATGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: SISSANWAGTVSLKPFINYCLLL*IREMVI Trigger: TATCACCATCTCCCTTATGCACAGCAGCAAGCAATA...GTTGATAAATGGCTTAAGGGAAACCGTACCTGCCCAATTTGCCGAGCTGATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTGGAGGGGGCATTGGCTaGTGGGATCGGTATCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: RLSSMDSPYIHVMRNTQTGGGIG*WDRYLL Trigger: TAGTAGATACCGATCCCAGCAGCCAATGCCCCCTCC...AGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGCAAGTATTCTGGGCACCTGTTGTATTAAGCTTTTCTCGTTCTAACATAGAAGGTTGGGCCCACTaGAGGTGGTACTGGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLQVFWAPVVLSFSRSNIEGWAH*RWYWKH Trigger: ATGCTTCCAGTACCACCTGCAGTGGGCCCAACCTTC...TATGTTAGAACGAGAAAAGCTTAATACAACAGGTGCCCAGAATACTTGCAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGCAGCTCAGGACTGGAGTGTGTCAACTCAATTCACACAGAAACAAACAGTACTACACACAAAGTCTaGTCTGACTGGTGGTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QSSSGLECVNSIHTETNSTTHKV*SDWWLL Trigger: TAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGT...ACTGTTTGTTTCTGTGTGAATTGAGTTGACACACTCCAGTCCTGAGCTGCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAAAGACTCTAAGAAGCTaGCTTGACTCAAAATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CKERSIDPFGKGRAGSHTKTLRS*LDSKSH Trigger: GTGTGATTTTGAGTCAAGGCAGCTTCTTAGAGTCTT...TGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAGATACATTCGGAGGGTaGAAGGCTCGAGGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQDTFGG*KARGSS Trigger: AGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATC...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCTTAGGCGACAAATTGGCCTGGTaGTGGCAAGTGGGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SPYIHVMRNTQTKFVLLGDKLAW*WQVGRM Trigger: CATCCTCCCCACTTGCCACCACCAGGCCAATTTGTC...GCCTAAGAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | TTGATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGATGGAAAGGGACAAATTaGCCTGGTGGTGGCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIKSHSAKKGPLTLLVKGWKGTN*PGGGKW Trigger: CCACTTGCCACCACCAGGCCAATTTGTCCCTTTCCA...TCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | ACACACATTCTTGGTACATGCTGGTATATAGGATCTCACACACACAGTAGCTACGTCTGCTCTGACTGGTaGTTGCTAGGATTGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: THILGTCWYIGSHTHSSYVCSDW*LLGLNL Trigger: CAGGTTCAATCCTAGCAACCACCAGTCAGAGCAGAC...GTAGCTACTGTGTGTGTGAGATCCTATATACCAGCATGTACCAAGAATGTGTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAGCTCAGGACTGGAGTGTGTCAACTCAATTCACACAGAAACAAACAGTAAAGTCTGCTCTGACTaGTGGTTGCTAGGATTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSSSGLECVNSIHTETNSKVCSD*WLLGLN Trigger: GTTCAATCCTAGCAACCACCAGTCAGAGCAGACTTT...ACTGTTTGTTTCTGTGTGAATTGAGTTGACACACTCCAGTCCTGAGCTGCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGAAACCATTGTTGCCCATGGAGGCCTGAGTGAAGAACACAACCAGAAACTGTCTCTTAGGACTTaGACTATCTTCACTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPETIVAHGGLSEEHNQKLSLRT*TIFTLS Trigger: AGAGAGAGTGAAGATAGTCCAAGTCCTAAGAGACAG...TTTCTGGTTGTGTTCTTCACTCAGGCCTCCATGGGCAACAATGGTTTCAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098098.9 |
||
| CDS-3UTR TCA 90 bp | CCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCGTTACAGCGTTCCCCTaGGAAGTGATGTTGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHRLSSMDSPYIHVMRNTVTAFP*EVMLIW Trigger: CCAAATCAACATCACTTCTCAGGGGAACGCTGTAAC...GGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAGGCTCTATATAAGGTAGATTGCTATATCATCTGGAGCTACCACTTTTTACTGCAGAGGCGATCGTaGCTGCTGTGTTTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKALYKVDCYIIWSYHFLLQRRS*LLCLER Trigger: CCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAG...TAAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR TCA 90 bp | ATGCTTAGAATGGATGCACCCTTAGCAATCAGTGTGCAACAGCAAACACAAGGGTCTAAGAAGCTGCCTTaGCTCAAAATCACACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: MLRMDAPLAISVQQQTQGSKKLP*LKITHA Trigger: TGCATGTGTGATTTTGAGTCAAGGCAGCTTCTTAGA...CCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCCATTCTAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR GCA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAACGAACTGAAGGGGGCTaGCTATTTGATGTCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQRTEGG*LFDVIS Trigger: GGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCG...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGCTGGAAGCCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGTATTGCTTGCTGCTGTaGATAAGGGAGATGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: EGWKPHRLSSMDSPYIHVYCLLL*IREMVI Trigger: TATCACCATCTCCCTTATGCACAGCAGCAAGCAATA...CACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGGCTTCCAGCCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAATCATGTGTCAGGAACTaGAAAGGAGCTGACGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQSCVRN*KGADGG Trigger: ACCTCCGTCAGCTCCTTTGCAGTTCCTGACACATGA...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGACTACACACAAAGTCTaGTCTGACTGGTGGTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGTTHKV*SDWWLL Trigger: TAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGT...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAACAAGCAGGGATGTGCTaGCCAGTGCAGAGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSMDSPYIHVMRNTQTKQAGMC*PVQSGS Trigger: GCTTCCACTCTGCACTGGCCAGCACATCCCTGCTTG...TTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAAAGGAGGAGGGGGCATTaGCTGCTGGGATCGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSMDSPYIHVMRNTQTKRRRGH*LLGSVS Trigger: AGATACCGATCCCAGCAGCCAATGCCCCCTCCTCCT...TTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAGTCTGCTCTGACTGGTaGTTGCTAGGATTGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQVCSDW*LLGLNL Trigger: CAGGTTCAATCCTAGCAACCACCAGTCAGAGCAGAC...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGAAAGTCTGCTCTGACTaGTGGTTGCTAGGATTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGKVCSD*WLLGLN Trigger: GTTCAATCCTAGCAACCACCAGTCAGAGCAGACTTT...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAGCTCAGGACTGGAGTGTGTCAACTCAATTCACACAGAAACAAACAGTTTGGCATGGAACTCGTaGTTACAAGGTAAGACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QSSSGLECVNSIHTETNSLAWNS*LQGKTL Trigger: TAGAGTCTTACCTTGTAACCACGAGTTCCATGCCAA...ACTGTTTGTTTCTGTGTGAATTGAGTTGACACACTCCAGTCCTGAGCTGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| 3UTR CAA 72 bp | CAGGTACGGTTTCCCTTAAGCCATTTATCAACACACTaGGCATGGAACTCGTGGTTACAAGGTAAGACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QVRFPLSHLSTH*AWNSWLQGKTL Trigger: TAGAGTCTTACCTTGTAACCACGAGTTCCATGCCAAGTGTGTTGATAAATGGCTTAAGGGAAACCGTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAGTTACAGCGTTCCCCTaGGAAGTGATGTTGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQVTAFP*EVMLIW Trigger: CCAAATCAACATCACTTCTCAGGGGAACGCTGTAAC...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | ATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCCCAAAGGACACCTCCTaGTGCAAAGGGTCATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MDSPYIHVMRNTQTKFVLPKDTS*CKGSCV Trigger: GACACATGACCCTTTGCATCAGGAGGTGTCCTTTGG...GAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCTTAGGCCATCTAATTCAAAGCTaGAGGTTGGGCCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPYIHVMRNTQTKFVLLGHLIQS*RLGPLQ Trigger: CTGCAGTGGGCCCAACCTTCAGCTTTGAATTAGATG...GCCTAAGAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTTCTTCTGTTGCGTaGAGGTGTGTTACAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQTSSVA*RCVTAF Trigger: GAACGCTGTAACACACCTGCACGCAACAGAAGAAGT...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | CCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCACTACACACAAAGTCTaGTCTGACTGGTGGTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PHRLSSMDSPYIHVMRNTTTHKV*SDWWLL Trigger: TAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGT...GGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAACACTCTGAATCGCGATaGACTTCTGAAGCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQHSESR*TSEASA Trigger: AGCTGATGCTTCAGAAGTGCATCGCGATTCAGAGTG...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS-3UTR CCA 90 bp | AGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCTTAGGCATCAGCTCGGCAAATTaGGCAGGTACGGTTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPYIHVMRNTQTKFVLLGISSAN*AGTVSL Trigger: AAGGGAAACCGTACCTGCCCAATTTGCCGAGCTGAT...GCCTAAGAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR TCA 90 bp | ATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCCATCTAATTCAAAGCTaGAGGTTGGGCCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MDSPYIHVMRNTQTKFVLHLIQS*RLGPLQ Trigger: CTGCAGTGGGCCCAACCTTCAGCTTTGAATTAGATG...GAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | CCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCTCTAAGAAGCTGCCTTaGCTCAAAATCACACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHRLSSMDSPYIHVMRNTSKKLP*LKITHA Trigger: TGCATGTGTGATTTTGAGTCAAGGCAGCTTCTTAGA...GGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR GCA 90 bp | ATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCGAGGACTTCTTCTGTTaGGTGCAGGTGTGTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MDSPYIHVMRNTQTKFVLEDFFC*VQVCYS Trigger: GCTGTAACACACCTGCACGCAACAGAAGAAGTCCTC...GAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS-3UTR GCA 90 bp | ATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCTCATGTGTCAGGAACTaGAAAGGAGCTGACGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MDSPYIHVMRNTQTKFVLSCVRN*KGADGG Trigger: ACCTCCGTCAGCTCCTTTGCAGTTCCTGACACATGA...GAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS-3UTR GCA 90 bp | AGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCTTAGGCCACTCTGAATCGCGATaGACTTCTGAAGCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPYIHVMRNTQTKFVLLGHSESR*TSEASA Trigger: AGCTGATGCTTCAGAAGTGCATCGCGATTCAGAGTG...GCCTAAGAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS-3UTR TCA 90 bp | TTGATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGTAAAACTGCCTACTTaGAGATGTTCTCCTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIKSHSAKKGPLTLLVKGVKLPT*RCSPKS Trigger: GCTCTTAGGAGAACATCTTCAAGTAGGCAGTTTTAC...TCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS-3UTR GCA 90 bp | TTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAATCATGTGTCAGGAACTaGAAAGGAGCTGACGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSMDSPYIHVMRNTQTKSCVRN*KGADGG Trigger: ACCTCCGTCAGCTCCTTTGCAGTTCCTGACACATGA...TTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAGCTGTTCAATATCTaGTTTAGTCAGTCCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLSSMDSPYIHVMRNTQTKLFNI*FSQSPR Trigger: CCTCGGGGACTGACTAAAGCAGATATTGAACAGCTT...AGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS-3UTR GCA 90 bp | ACACTGCAAGTATTCTGGGCACCTGTTGTATTAAGCTTTTCTCGTTCTAACATAAAGCTGTTCAATATCTaGTTTAGTCAGTCCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQVFWAPVVLSFSRSNIKLFNI*FSQSPR Trigger: CCTCGGGGACTGACTAAAGCAGATATTGAACAGCTT...TATGTTAGAACGAGAAAAGCTTAATACAACAGGTGCCCAGAATACTTGCAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| CDS-3UTR GCA 90 bp | ACACACATTCTTGGTACATGCTGGTATATAGGATCTCACACACACAGTAGCTACAAGACTCTAAGAAGCTaGCTTGACTCAAAATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: THILGTCWYIGSHTHSSYKTLRS*LDSKSH Trigger: GTGTGATTTTGAGTCAAGGCAGCTTCTTAGAGTCTT...GTAGCTACTGTGTGTGTGAGATCCTATATACCAGCATGTACCAAGAATGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| CDS-3UTR CCA 90 bp | TTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAAACATGCCTGAAGCATTaGAGGAGGCACACTACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSSMDSPYIHVMRNTQTKTCLKH*RRHTTD Trigger: GTCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGT...TTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAAACTTCTTCTGTTGCGTaGAGGTGTGTTACAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSMDSPYIHVMRNTQTKTSSVA*RCVTAF Trigger: GAACGCTGTAACACACCTGCACGCAACAGAAGAAGT...TTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAATCGAGGTTCCTCTATTaGTTGCTGCTGTGCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSMDSPYIHVMRNTQTKSRFLY*LLLCIR Trigger: CCTTATGCACAGCAGCAAGCAATAGAGGAACCTCGA...TTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAGGCTCTATATAAGGTAGATTGCTATATCATCTGGAGCTACCACTTTTTATGTATAATCAAAGACTaGATGAGAGAGGCGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKALYKVDCYIIWSYHFLCIIKD*MREALS Trigger: AGACAGCGCCTCTCTCATTCAGTCTTTGATTATACA...TAAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098098.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAAAAGCTGTTCAATATCTaGTTTAGTCAGTCCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSMDSPYIHVMRNTQTKKLFNI*FSQSPR Trigger: CCTCGGGGACTGACTAAAGCAGATATTGAACAGCTT...TTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAGACTCTAAGAAGCTaGCTTGACTCAAAATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RLSSMDSPYIHVMRNTQTKTLRS*LDSKSH Trigger: GTGTGATTTTGAGTCAAGGCAGCTTCTTAGAGTCTT...AGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCACGAGCAGGTCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGTCTCCCATGGTCGCATaGGTGGTGAGGGAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPRAGLHSLESSVPRPSQSPMVA*VVRELV Trigger: CACCAGCTCCCTCACCACCAATGCGACCATGGGAGA...CTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGACCTGCTCGTGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098098.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCACGAGCAGGTCTGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGGAGGACTTCTTCTGTaGCGTGCAGGTGTGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: PPRAGLHSLESSVPRPSQGGLLL*RAGVLQ Trigger: CTGTAACACACCTGCACGCAACAGAAGAAGTCCTCC...CTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCAGACCTGCTCGTGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CAA 90 bp | TGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATCTAAGGGGGCTGCCTATTaGATGTCATCTCCCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CTASRAPCRDLPRRQQSSKGAAY*MSSPMV Trigger: GACCATGGGAGATGACATCAAATAGGCAGCCCCCTT...AGATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS TCA 90 bp | GAAGCATTGGAGGAGGCACACTACAGACGGGGAGGTGTTGTCCACTaGAAACCACCGAGCATCCTGGGACCTGCTGTGTACTGCAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EALEEAHYRRGGVVH*KPPSILGPAVYCKQ Trigger: CTGCTTGCAGTACACAGCAGGTCCCAGGATGCTCGGTGGTTTTCAGTGGACAACACCTCCCCGTCTGTAGTGTGCCTCCTCCAATGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
||
| CDS-3UTR CAA 90 bp | TGCACAGCCTCGAGAGCTCCGTGCCGAGACCTTCCCAGGAGACAGCAGTCATCTAGGTTCCTCTATTGCTaGCTGCTGTGCATAAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CTASRAPCRDLPRRQQSSRFLYC*LLCIRE Trigger: CTCCCTTATGCACAGCAGCAAGCAATAGAGGAACCT...AGATGACTGCTGTCTCCTGGGAAGGTCTCGGCACGGAGCTCTCGAGGCTGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CAA 90 bp | AAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTCTGACGGAGGTAATGTaGGGGGATGGGCTGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KERSIDPFGKGRAGSHTGLTEVM*GDGLKG Trigger: CCCCTTCAGCCCATCCCCCAACATTACCTCCGTCAG...ACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGCATCAGCTCGGCAAATaGGGCAGGTACGGTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AKKGPLTLLVKGGLEATQHQLGK*GRYGFP Trigger: AGGGAAACCGTACCTGCCCAATTTGCCGAGCTGATG...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGGAGGACTTCTTCTGTaGCGTGCAGGTGTGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: AKKGPLTLLVKGGLEATQGGLLL*RAGVLQ Trigger: CTGTAACACACCTGCACGCAACAGAAGAAGTCCTCC...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAACAGACGGGGAGGTGTaGTCCACTGAAAACCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: CKERSIDPFGKGRAGSHTTDGEV*STENHR Trigger: TCGGTGGTTTTCAGTGGACAACACCTCCCCGTCTGT...TGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCACAGACGGGGAGGTGTaGTCCACTGAAAACCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: TQCKERSIDPFGKGRAGSTDGEV*STENHR Trigger: TCGGTGGTTTTCAGTGGACAACACCTCCCCGTCTGT...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | GTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAACAGACGGGGAGGTGTaGTCCACTGAAAACCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: VTQCKERSIDPFGKGRAGTDGEV*STENHR Trigger: TCGGTGGTTTTCAGTGGACAACACCTCCCCGTCTGT...TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGCTGGAAGCCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGCTGACGGAGGTAATGTaGGGGGATGGGCTGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EGWKPHRLSSMDSPYIHVLTEVM*GDGLKG Trigger: CCCCTTCAGCCCATCCCCCAACATTACCTCCGTCAG...CACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGGCTTCCAGCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | CAAATTGGGCAGGTACGGTTTCCCTTAAGCCATTTATCAACACACTTGGCATGGCTGACGGAGGTAATGTaGGGGGATGGGCTGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QIGQVRFPLSHLSTHLAWLTEVM*GDGLKG Trigger: CCCCTTCAGCCCATCCCCCAACATTACCTCCGTCAG...CCATGCCAAGTGTGTTGATAAATGGCTTAAGGGAAACCGTACCTGCCCAATTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCATCAGCTCGGCAAATaGGGCAGGTACGGTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TQCKERSIDPFGKGRAGSHQLGK*GRYGFP Trigger: AGGGAAACCGTACCTGCCCAATTTGCCGAGCTGATG...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAAAGGGGGCTGCCTATTaGATGTCATCTCCCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CKERSIDPFGKGRAGSHTKGAAY*MSSPMV Trigger: GACCATGGGAGATGACATCAAATAGGCAGCCCCCTT...TGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCGGAGGACTTCTTCTGTaGCGTGCAGGTGTGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: TQCKERSIDPFGKGRAGSGGLLL*RAGVLQ Trigger: CTGTAACACACCTGCACGCAACAGAAGAAGTCCTCC...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGCTCGAGGTTCCTCTATaGCTTGCTGCTGTGCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: AKKGPLTLLVKGGLEATQLEVPL*LAAVHK Trigger: CTTATGCACAGCAGCAAGCAATAGAGGAACCTCGAG...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTTGGAAAGGGACAAATaGGCCTGGTGGTGGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KERSIDPFGKGRAGSHTGLERDK*AWWWQV Trigger: CACTTGCCACCACCAGGCCAATTTGTCCCTTTCCAA...ACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACATTGGAAAGGGACAAATaGGCCTGGTGGTGGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CKERSIDPFGKGRAGSHTLERDK*AWWWQV Trigger: CACTTGCCACCACCAGGCCAATTTGTCCCTTTCCAA...TGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCTTGGAAAGGGACAAATaGGCCTGGTGGTGGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TQCKERSIDPFGKGRAGSLERDK*AWWWQV Trigger: CACTTGCCACCACCAGGCCAATTTGTCCCTTTCCAA...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGAAACCATTGTTGCCCATGGAGGCCTGAGTGAAGAACACAACCAGAAACATCAGCTCGGCAAATaGGGCAGGTACGGTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPETIVAHGGLSEEHNQKHQLGK*GRYGFP Trigger: AGGGAAACCGTACCTGCCCAATTTGCCGAGCTGATG...TTTCTGGTTGTGTTCTTCACTCAGGCCTCCATGGGCAACAATGGTTTCAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CAA 90 bp | GCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGAGAAGTGATGTTGATTaGGTCGAACTGAAGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AKKGPLTLLVKGGLEATQRSDVD*VELKGA Trigger: AGCCCCCTTCAGTTCGACCAAATCAACATCACTTCT...CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGCAGTAGTTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACGGAGGACTTCTTCTGTaGCGTGCAGGTGTGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LSAVVRKVLTCVRQQDEYGGLLL*RAGVLQ Trigger: CTGTAACACACCTGCACGCAACAGAAGAAGTCCTCC...GTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAACTACTGCAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CAA 90 bp | ACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCAGGTTCCTCTATTGCTaGCTGCTGTGCATAAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQCKERSIDPFGKGRAGSRFLYC*LLCIRE Trigger: CTCCCTTATGCACAGCAGCAAGCAATAGAGGAACCT...GCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTCTCGAGGTTCCTCTATaGCTTGCTGCTGTGCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: KKGPLTLLVKGGLEATQVLEVPL*LAAVHK Trigger: CTTATGCACAGCAGCAAGCAATAGAGGAACCTCGAG...AACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGCTGGAAGCCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGACAGACGGGGAGGTGTaGTCCACTGAAAACCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: EGWKPHRLSSMDSPYIHVTDGEV*STENHR Trigger: TCGGTGGTTTTCAGTGGACAACACCTCCCCGTCTGT...CACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGGCTTCCAGCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | GTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAACATGCCTGAAGCATaGGAGGAGGCACACTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VTQCKERSIDPFGKGRAGNMPEA*EEAHYR Trigger: TCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGTT...TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGCTGGAAGCCACACAGGTTAGAAGTGATGTTGATTaGGTCGAACTGAAGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KKGPLTLLVKGGLEATQVRSDVD*VELKGA Trigger: AGCCCCCTTCAGTTCGACCAAATCAACATCACTTCT...AACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGCAGTAGTTAGGAAAGTGCTCACCTGTGTGCGTCAACAGGATGAATACAACATGCCTGAAGCATaGGAGGAGGCACACTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSAVVRKVLTCVRQQDEYNMPEA*EEAHYR Trigger: TCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGTT...GTATTCATCCTGTTGACGCACACAGGTGAGCACTTTCCTAACTACTGCAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAGCTCAGGACTGGAGTGTGTCAACTCAATTCACACAGAAACAAACAGTTTGGAAAGGGACAAATaGGCCTGGTGGTGGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QSSSGLECVNSIHTETNSLERDK*AWWWQV Trigger: CACTTGCCACCACCAGGCCAATTTGTCCCTTTCCAA...ACTGTTTGTTTCTGTGTGAATTGAGTTGACACACTCCAGTCCTGAGCTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CAA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGAAGGGGGCTGCCTATTaGATGTCATCTCCCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGKGAAY*MSSPMV Trigger: GACCATGGGAGATGACATCAAATAGGCAGCCCCCTT...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAGCTCAGGACTGGAGTGTGTCAACTCAATTCACACAGAAACAAACAGTCTCGAGGTTCCTCTATaGCTTGCTGCTGTGCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSSSGLECVNSIHTETNSLEVPL*LAAVHK Trigger: CTTATGCACAGCAGCAAGCAATAGAGGAACCTCGAG...ACTGTTTGTTTCTGTGTGAATTGAGTTGACACACTCCAGTCCTGAGCTGCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CAA 90 bp | ATGCTTAGAATGGATGCACCCTTAGCAATCAGTGTGCAACAGCAAACACAAGGGTGCTCTGACTGGTGGTaGCTAGGATTGAACCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: MLRMDAPLAISVQQQTQGCSDWW*LGLNLY Trigger: GTACAGGTTCAATCCTAGCAACCACCAGTCAGAGCA...CCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCCATTCTAAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CAA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGAACATGCCTGAAGCATaGGAGGAGGCACACTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGNMPEA*EEAHYR Trigger: TCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGTT...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAGGCTCTATATAAGGTAGATTGCTATATCATCTGGAGCTACCACTTTTTACTGACGGAGGTAATGTaGGGGGATGGGCTGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKALYKVDCYIIWSYHFLLTEVM*GDGLKG Trigger: CCCCTTCAGCCCATCCCCCAACATTACCTCCGTCAG...TAAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CAA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGTGCTCTGACTGGTGGTaGCTAGGATTGAACCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGCSDWW*LGLNLY Trigger: GTACAGGTTCAATCCTAGCAACCACCAGTCAGAGCA...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAAAGGGGGCTGCCTATTaGATGTCATCTCCCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQKGAAY*MSSPMV Trigger: GACCATGGGAGATGACATCAAATAGGCAGCCCCCTT...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | ATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAGGGAGAAGTGATGTTGATTaGGTCGAACTGAAGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IKSHSAKKGPLTLLVKGGRSDVD*VELKGA Trigger: AGCCCCCTTCAGTTCGACCAAATCAACATCACTTCT...CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAGGAGGACTTCTTCTGTaGCGTGCAGGTGTGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQGGLLL*RAGVLQ Trigger: CTGTAACACACCTGCACGCAACAGAAGAAGTCCTCC...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTCATCAGCTCGGCAAATaGGGCAGGTACGGTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLSSMDSPYIHVMRNTQTHQLGK*GRYGFP Trigger: AGGGAAACCGTACCTGCCCAATTTGCCGAGCTGATG...AGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS TCA 90 bp | CCTCATAATTTTCAACTTCTCCGTCTTCTACATCTAATTCAAAGCTaGAGGTTGGGCCCACTGCAGGTGGTACTGGAAGCATTGATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PHNFQLLRLLHLIQS*RLGPLQVVLEALIA Trigger: TGCTATCAATGCTTCCAGTACCACCTGCAGTGGGCCCAACCTTCAGCTTTGAATTAGATGTAGAAGACGGAGAAGTTGAAAATTATGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAGGCTCTATATAAGGTAGATTGCTATATCATCTGGAGCTACCACTTTTTAACAGACGGGGAGGTGTaGTCCACTGAAAACCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: LKALYKVDCYIIWSYHFLTDGEV*STENHR Trigger: TCGGTGGTTTTCAGTGGACAACACCTCCCCGTCTGT...TAAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CAA 90 bp | TTGATTAAGTCACACAGTGCAAAGAAAGGTCCATTGACCCTTTTGGTAAAGGGAAACATGCCTGAAGCATaGGAGGAGGCACACTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LIKSHSAKKGPLTLLVKGNMPEA*EEAHYR Trigger: TCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGTT...TCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAATGCTCTGACTGGTGGTaGCTAGGATTGAACCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HRLSSMDSPYIHVMRNTQCSDWW*LGLNLY Trigger: GTACAGGTTCAATCCTAGCAACCACCAGTCAGAGCA...TTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAGCTCAGGACTGGAGTGTGTCAACTCAATTCACACAGAAACAAACAGTCATTTATCAACACACTaGGCATGGAACTCGTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QSSSGLECVNSIHTETNSHLSTH*AWNSWL Trigger: TAACCACGAGTTCCATGCCAAGTGTGTTGATAAATG...ACTGTTTGTTTCTGTGTGAATTGAGTTGACACACTCCAGTCCTGAGCTGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
||
| CDS-3UTR CAA 90 bp | CTGAAGGCTCTATATAAGGTAGATTGCTATATCATCTGGAGCTACCACTTTTTAAAGGGGGCTGCCTATTaGATGTCATCTCCCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKALYKVDCYIIWSYHFLKGAAY*MSSPMV Trigger: GACCATGGGAGATGACATCAAATAGGCAGCCCCCTT...TAAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| CDS-3UTR CAA 90 bp | AGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAGGTTCCTCTATTGCTaGCTGCTGTGCATAAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RLSSMDSPYIHVMRNTQTRFLYC*LLCIRE Trigger: CTCCCTTATGCACAGCAGCAAGCAATAGAGGAACCT...AGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS-3UTR CAA 90 bp | AGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAGAAGTGATGTTGATTaGGTCGAACTGAAGGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: RLSSMDSPYIHVMRNTQTRSDVD*VELKGA Trigger: AGCCCCCTTCAGTTCGACCAAATCAACATCACTTCT...AGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS-3UTR CAA 90 bp | AGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCTTAGGCAGAAGTGATGTTGATTaGGTCGAACTGAAGGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: SPYIHVMRNTQTKFVLLGRSDVD*VELKGA Trigger: AGCCCCCTTCAGTTCGACCAAATCAACATCACTTCT...GCCTAAGAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS-3UTR CAA 90 bp | ATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCAGGTTCCTCTATTGCTaGCTGCTGTGCATAAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: MDSPYIHVMRNTQTKFVLRFLYC*LLCIRE Trigger: CTCCCTTATGCACAGCAGCAAGCAATAGAGGAACCT...GAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS-3UTR CAA 90 bp | ATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAATTTGTGCTCAACATGCCTGAAGCATaGGAGGAGGCACACTACAGA | + |
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Preference number: 5 (lower is better) Translates to: MDSPYIHVMRNTQTKFVLNMPEA*EEAHYR Trigger: TCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGTT...GAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS-3UTR CAA 90 bp | CCACACAGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCATTTATCAACACACTaGGCATGGAACTCGTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: PHRLSSMDSPYIHVMRNTHLSTH*AWNSWL Trigger: TAACCACGAGTTCCATGCCAAGTGTGTTGATAAATG...GGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCTGTGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS-3UTR CAA 90 bp | TTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTAAACTCGAGGTTCCTCTATaGCTTGCTGCTGTGCATAAG | + |
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Preference number: 5 (lower is better) Translates to: LSSMDSPYIHVMRNTQTKLEVPL*LAAVHK Trigger: CTTATGCACAGCAGCAAGCAATAGAGGAACCTCGAG...TTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS-3UTR CAA 90 bp | AGGTTAAGTTCGATGGATAGTCCATATATACATGTGATGAGGAACACCCAAACTCATTTATCAACACACTaGGCATGGAACTCGTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: RLSSMDSPYIHVMRNTQTHLSTH*AWNSWL Trigger: TAACCACGAGTTCCATGCCAAGTGTGTTGATAAATG...AGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCATCGAACTTAACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS-3UTR CAA 90 bp | CTGAAGGCTCTATATAAGGTAGATTGCTATATCATCTGGAGCTACCACTTTTTACATTTATCAACACACTaGGCATGGAACTCGTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: LKALYKVDCYIIWSYHFLHLSTH*AWNSWL Trigger: TAACCACGAGTTCCATGCCAAGTGTGTTGATAAATG...TAAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 |
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| CDS CAA 72 bp | AAGCATTGGAGGAGGCACACTACAGACGGGGAGGTGTaGTCCACTGAAAACCACCGAGCATCCTGGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: KHWRRHTTDGEV*STENHRASWDL Trigger: CAGGTCCCAGGATGCTCGGTGGTTTTCAGTGGACAACACCTCCCCGTCTGTAGTGTGCCTCCTCCAATGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS CAA 90 bp | ACATGCCTGAAGCATTGGAGGAGGCACACTACAGACGGGGAGGTGTaGTCCACTGAAAACCACCGAGCATCCTGGGACCTGCTGTGTACT | + |
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Preference number: 6 (lower is better) Translates to: TCLKHWRRHTTDGEV*STENHRASWDLLCT Trigger: AGTACACAGCAGGTCCCAGGATGCTCGGTGGTTTTCAGTGGACAACACCTCCCCGTCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS CCA 72 bp | GCTGGATGTAACAGACGGGGAGATACATTCGGAGGGTaGAAGGCTCGAGGTTCCTCTATTGCTTGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: AGCNRRGDTFGG*KARGSSIACCC Trigger: ACAGCAGCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACATCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS CCA 72 bp | GTACTGGAAGCATTGATAGCACGTATGGTAGTAAGCTaGGATGGTAAGGAGGAGGGGGCATTGGCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VLEALIARMVVS*DGKEEGALAAG Trigger: CCCAGCAGCCAATGCCCCCTCCTCCTTACCATCCCAGCTTACTACCATACGTGCTATCAATGCTTCCAGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS CAA 90 bp | CTGAGAAGTGATGTTGATTTGGTCGAACTGAAGGGGGCTGCCTATTaGATGTCATCTCCCATGGTCGCATTGGTGGTGAGGGAGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LRSDVDLVELKGAAY*MSSPMVALVVRELV Trigger: CACCAGCTCCCTCACCACCAATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAATCAACATCACTTCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098098.9 |
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| CDS CAA 90 bp | TGCGTGCAGGTGTGTTACAGCGTTCCCCTGAGAAGTGATGTTGATTaGGTCGAACTGAAGGGGGCTGCCTATTTGATGTCATCTCCCATG | + |
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Preference number: 6 (lower is better) Translates to: CVQVCYSVPLRSDVD*VELKGAAYLMSSPM Trigger: CATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAATCAACATCACTTCTCAGGGGAACGCTGTAACACACCTGCACGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS TCA 72 bp | GAATTATGTCGAGACAGACGTTCCCTTCTTCCTCGCTaGCGCCTAACAGGAGGACTTCTTCTGTTGCGTGCA | + |
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Preference number: 6 (lower is better) Translates to: ELCRDRRSLLPR*RLTGGLLLLRA Trigger: TGCACGCAACAGAAGAAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGAACGTCTGTCTCGACATAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS CAA 72 bp | GATGTTGATTTGGTCGAACTGAAGGGGGCTGCCTATTaGATGTCATCTCCCATGGTCGCATTGGTGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: DVDLVELKGAAY*MSSPMVALVVR Trigger: CCTCACCACCAATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAATCAACATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098098.9 |
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| CDS CAA 90 bp | GACGGGGAGATACATTCGGAGGGTGGAAGGCTCGAGGTTCCTCTATaGCTTGCTGCTGTGCATAAGGGAGATGGTGATAGTTTTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: DGEIHSEGGRLEVPL*LAAVHKGDGDSFHL Trigger: AAGATGAAAACTATCACCATCTCCCTTATGCACAGCAGCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS CAA 90 bp | ATGGGGTGCCACCGTAGTTACCGTGTAGGAGACAGGAACTGTTCCTaGATGGAGCTGATCATGTATGTCAACCATGACTGCATTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: MGCHRSYRVGDRNCS*MELIMYVNHDCILL Trigger: CAGCAGAATGCAGTCATGGTTGACATACATGATCAGCTCCATCAAGGAACAGTTCCTGTCTCCTACACGGTAACTACGGTGGCACCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS GCA 72 bp | AGGATTGAACCTGTACGAAGGAAGCTGTTCAATATCTaGTTTAGTCAGTCCCCGAGGTTTCGCCTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RIEPVRRKLFNI*FSQSPRFRLSQ Trigger: CTGGGAGAGGCGAAACCTCGGGGACTGACTAAAGCAGATATTGAACAGCTTCCTTCGTACAGGTTCAATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS CCA 72 bp | GTATCTACTACGTCCTGTGAGTCTCCGAGGCATAAATaGTGGGTAAGGTACTCCAAAGGACACCTCCTGATG | + |
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Preference number: 6 (lower is better) Translates to: VSTTSCESPRHK*WVRYSKGHLLM Trigger: CATCAGGAGGTGTCCTTTGGAGTACCTTACCCACCATTTATGCCTCGGAGACTCACAGGACGTAGTAGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000136730.8 |
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| CDS CAA 72 bp | ATTCGGAGGGTGGAAGGCTCGAGGTTCCTCTATTGCTaGCTGCTGTGCATAAGGGAGATGGTGATAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: IRRVEGSRFLYC*LLCIREMVIVF Trigger: GAAAACTATCACCATCTCCCTTATGCACAGCAGCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS CAA 72 bp | ATACATTCGGAGGGTGGAAGGCTCGAGGTTCCTCTATaGCTTGCTGCTGTGCATAAGGGAGATGGTGATAGT | + |
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Preference number: 6 (lower is better) Translates to: IHSEGGRLEVPL*LAAVHKGDGDS Trigger: ACTATCACCATCTCCCTTATGCACAGCAGCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAATGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS CAA 90 bp | GGGAGATACATTCGGAGGGTGGAAGGCTCGAGGTTCCTCTATTGCTaGCTGCTGTGCATAAGGGAGATGGTGATAGTTTTCATCTTGACT | + |
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Preference number: 6 (lower is better) Translates to: GRYIRRVEGSRFLYC*LLCIREMVIVFILT Trigger: AGTCAAGATGAAAACTATCACCATCTCCCTTATGCACAGCAGCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS CAA 72 bp | GTGTGTTACAGCGTTCCCCTGAGAAGTGATGTTGATTaGGTCGAACTGAAGGGGGCTGCCTATTTGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: VCYSVPLRSDVD*VELKGAAYLMS Trigger: TGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAATCAACATCACTTCTCAGGGGAACGCTGTAACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS CCA 72 bp | CACATGCATACTACACACAAAGTCTGCTCTGACTGGTaGTTGCTAGGATTGAACCTGTACGAAGGAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: HMHTTHKVCSDW*LLGLNLYEGSC Trigger: ACAGCTTCCTTCGTACAGGTTCAATCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGTATGCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS CCA 72 bp | TCACACATGCATACTACACACAAAGTCTGCTCTGACTaGTGGTTGCTAGGATTGAACCTGTACGAAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SHMHTTHKVCSD*WLLGLNLYEGS Trigger: GCTTCCTTCGTACAGGTTCAATCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGTATGCATGTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS CAA 72 bp | ACACACAAAGTCTGCTCTGACTGGTGGTTGCTAGGATaGAACCTGTACGAAGGAAGCTGTTCAATATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: THKVCSDWWLLG*NLYEGSCSISA Trigger: AGCAGATATTGAACAGCTTCCTTCGTACAGGTTCAATCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS CAA 72 bp | ATGCATACTACACACAAAGTCTGCTCTGACTGGTGGTaGCTAGGATTGAACCTGTACGAAGGAAGCTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: MHTTHKVCSDWW*LGLNLYEGSCS Trigger: TGAACAGCTTCCTTCGTACAGGTTCAATCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGTATGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS CAA 90 bp | TATTGCTTGCTGCTGTGCATAAGGGAGATGGTGATAGTTTTCATCTaGACTAATGGAATTATGTCGAGACAGACGTTCCCTTCTTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: YCLLLCIREMVIVFI*TNGIMSRQTFPSSS Trigger: CGAGGAAGAAGGGAACGTCTGTCTCGACATAATTCCATTAGTCAAGATGAAAACTATCACCATCTCCCTTATGCACAGCAGCAAGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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| CDS CAA 90 bp | ATGCATACTACACACAAAGTCTGCTCTGACTGGTGGTTGCTAGGATaGAACCTGTACGAAGGAAGCTGTTCAATATCTGCTTTAGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: MHTTHKVCSDWWLLG*NLYEGSCSISALVS Trigger: ACTGACTAAAGCAGATATTGAACAGCTTCCTTCGTACAGGTTCAATCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGTATGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS CAA 90 bp | AAATCACACATGCATACTACACACAAAGTCTGCTCTGACTGGTGGTaGCTAGGATTGAACCTGTACGAAGGAAGCTGTTCAATATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KSHMHTTHKVCSDWW*LGLNLYEGSCSISA Trigger: AGCAGATATTGAACAGCTTCCTTCGTACAGGTTCAATCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGTATGCATGTGTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS GCA 72 bp | TGGAACTCGTGGTTACAAGGTAAGACTCTAAGAAGCTaGCTTGACTCAAAATCACACATGCATACTACACAC | + |
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Preference number: 6 (lower is better) Translates to: WNSWLQGKTLRS*LDSKSHMHTTH Trigger: GTGTGTAGTATGCATGTGTGATTTTGAGTCAAGGCAGCTTCTTAGAGTCTTACCTTGTAACCACGAGTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 |
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| CDS CAA 72 bp | CTGCTGTGCATAAGGGAGATGGTGATAGTTTTCATCTaGACTAATGGAATTATGTCGAGACAGACGTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LLCIREMVIVFI*TNGIMSRQTFP Trigger: AGGGAACGTCTGTCTCGACATAATTCCATTAGTCAAGATGAAAACTATCACCATCTCCCTTATGCACAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000045793.15 ENSMUST00000098098.9 ENSMUST00000102934.9 ENSMUST00000107836.8 ENSMUST00000128426.8 ENSMUST00000136730.8 ENSMUST00000143337.2 ENSMUST00000145760.8 |
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