Pregenerated sensors for RNF32 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029130Ensembl transcript IDs: ENSMUST00000001247.12, ENSMUST00000160246.8, ENSMUST00000160383.8, ENSMUST00000160888.8, ENSMUST00000161398.8, ENSMUST00000162975.2, ENSMUST00000168460.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGAGGACTGTCTCTCTGGGACGCTGGCTGCTGGTTCCTATGGCTaGTTGCCGGCCATCGCCATGAAAGGAGAGTGGAGTCAGGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: QEDCLSGTLAAGSYG*LPAIAMKGEWSQAD Trigger: ATCTGCCTGACTCCACTCTCCTTTCATGGCGATGGCCGGCAAGCAGCCATAGGAACCAGCAGCCAGCGTCCCAGAGAGACAGTCCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CCA 90 bp | GATGTGCACAGGACAGGAGGACTGTCTCTCTGGGACGCTGGCTGCTaGTTCCTATGGCTGCTTGCCGGCCATCGCCATGAAAGGAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: DVHRTGGLSLWDAGC*FLWLLAGHRHERRV Trigger: CACTCTCCTTTCATGGCGATGGCCGGCAAGCAGCCATAGGAACCAGCAGCCAGCGTCCCAGAGAGACAGTCCTCCTGTCCTGTGCACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CCA 90 bp | AGGCATTGTGGAACAGATGTGCACAGGACAGGAGGACTGTCTCTCTaGGACGCTGGCTGCTGGTTCCTATGGCTGCTTGCCGGCCATCGC | + |
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Preference number: 1 (lower is better) Translates to: RHCGTDVHRTGGLSL*DAGCWFLWLLAGHR Trigger: GCGATGGCCGGCAAGCAGCCATAGGAACCAGCAGCCAGCGTCCCAGAGAGACAGTCCTCCTGTCCTGTGCACATCTGTTCCACAATGCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR GCA 90 bp | ACAGATGTGCACAGGACAGGAGGACTGTCTCTCTGGGACGCTGGCTaGTGGTTCCTATGGCTGCTTGCCGGCCATCGCCATGAAAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: TDVHRTGGLSLWDAG*WFLWLLAGHRHERR Trigger: TCTCCTTTCATGGCGATGGCCGGCAAGCAGCCATAGGAACCAGCAGCCAGCGTCCCAGAGAGACAGTCCTCCTGTCCTGTGCACATCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CCA 90 bp | GCTGGTTCCTATGGCTGCTTGCCGGCCATCGCCATGAAAGGAGAGTaGAGTCAGGCAGATGGAACATTCATAGATCTCATGGTGAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: AGSYGCLPAIAMKGE*SQADGTFIDLMVSS Trigger: GCTGCTCACCATGAGATCTATGAATGTTCCATCTGCCTGACTCCACTCTCCTTTCATGGCGATGGCCGGCAAGCAGCCATAGGAACCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CCA 90 bp | CTGCTTGCCGGCCATCGCCATGAAAGGAGAGTGGAGTCAGGCAGATaGAACATTCATAGATCTCATGGTGAGCAGCCTGTGCTTGGATTT | + |
|
Preference number: 1 (lower is better) Translates to: LLAGHRHERRVESGR*NIHRSHGEQPVLGF Trigger: AAATCCAAGCACAGGCTGCTCACCATGAGATCTATGAATGTTCCATCTGCCTGACTCCACTCTCCTTTCATGGCGATGGCCGGCAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR TCA 90 bp | CATGGTGAGCAGCCTGTGCTTGGATTTTCTCCCAGTCCTCCTTGGTaGTTATCTGGCCACACCTTTCATCTAGCTGCTGAAGAATGCTAC | + |
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Preference number: 1 (lower is better) Translates to: HGEQPVLGFSPSPPW*LSGHTFHLAAEECY Trigger: GTAGCATTCTTCAGCAGCTAGATGAAAGGTGTGGCCAGATAATCACCAAGGAGGACTGGGAGAAAATCCAAGCACAGGCTGCTCACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CCA 90 bp | GAGAAGAGTTCATCTATGTTGGTGTTGTATGAGCACAGGATTCGGTaGCTGATCTCTGTGAACTTTTCCTCAAAGAACTTTCTCCTTAAT | + |
|
Preference number: 1 (lower is better) Translates to: EKSSSMLVLYEHRIR*LISVNFSSKNFLLN Trigger: ATTAAGGAGAAAGTTCTTTGAGGAAAAGTTCACAGAGATCAGCCACCGAATCCTGTGCTCATACAACACCAACATAGATGAACTCTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CAA 90 bp | GAGGACTGTCTCTCTGGGACGCTGGCTGCTGGTTCCTATGGCTGCTaGCCGGCCATCGCCATGAAAGGAGAGTGGAGTCAGGCAGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: EDCLSGTLAAGSYGC*PAIAMKGEWSQADG Trigger: TCCATCTGCCTGACTCCACTCTCCTTTCATGGCGATGGCCGGCAAGCAGCCATAGGAACCAGCAGCCAGCGTCCCAGAGAGACAGTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCATTGTGGAACAGATGTGCACAGGACAGGAGGACTGTCTCTCTGGGACGCTTCTACCCCAAACCCATaGAGCTCATCCAAAAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RHCGTDVHRTGGLSLWDASTPNP*SSSKSR Trigger: CCTGCTTTTGGATGAGCTGCATGGGTTTGGGGTAGA...AGCGTCCCAGAGAGACAGTCCTCCTGTCCTGTGCACATCTGTTCCACAATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCATTGTGGAACAGATGTGCACAGGACAGGAGGACTGTCTCTCTGGGACGCTGAGCACAGGATTCGGTaGCTGATCTCTGTGAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: RHCGTDVHRTGGLSLWDAEHRIR*LISVNF Trigger: AAAGTTCACAGAGATCAGCCACCGAATCCTGTGCTC...AGCGTCCCAGAGAGACAGTCCTCCTGTCCTGTGCACATCTGTTCCACAATGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR-3UTR CCA 90 bp | AATTCAGCATTCAACAATTTTCTTTTGGTAGCAGGAGCGACAGAGAGGACAGACGGAGGACTGTCTCTCTaGGACGCTGGCTGCTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: NSAFNNFLLVAGATERTDGGLSL*DAGCWF Trigger: GAACCAGCAGCCAGCGTCCCAGAGAGACAGTCCTCC...GTCTGTCCTCTCTGTCGCTCCTGCTACCAAAAGAAAATTGTTGAATGCTGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATTCAACAATTTTCTTTTGGTAGCAGGAGCGACAGAGAGGACAGACATGGAATGGTGAGCAGCCTGTaGTTGGATTTTCTCCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SIQQFSFGSRSDREDRHGMVSSL*LDFLPV Trigger: GACTGGGAGAAAATCCAAGCACAGGCTGCTCACCAT...TCCATGTCTGTCCTCTCTGTCGCTCCTGCTACCAAAAGAAAATTGTTGAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAGCATTCAACAATTTTCTTTTGGTAGCAGGAGCGACAGAGAGGACAGACATTATGTTGGTGTTGTATaGGCACAGGATTCGGTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FSIQQFSFGSRSDREDRHYVGVV*AQDSVA Trigger: AGCCACCGAATCCTGTGCTCATACAACACCAACATA...ATGTCTGTCCTCTCTGTCGCTCCTGCTACCAAAAGAAAATTGTTGAATGCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CAA 90 bp | TGGCTGATCTCTGTGAACTTTTCCTCAAAGAACTTTCTCCTTAATTaGGCATCCGAAGGCGGGATTATTTTCCTCAGGTTTCTGTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: WLISVNFSSKNFLLN*ASEGGIIFLRFLYH Trigger: GTGGTACAGAAACCTGAGGAAAATAATCCCGCCTTCGGATGCCAAATTAAGGAGAAAGTTCTTTGAGGAAAAGTTCACAGAGATCAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCTCCCAGTCCTCCTTGGTGATTATCTGGCCACACCTTTCATCTAGCTGCGCAGACATCAATTTCTaGGAAGAGTTCATCTATGTT | + |
|
Preference number: 2 (lower is better) Translates to: IFSQSSLVIIWPHLSSSCADINF*EEFIYV Trigger: AACATAGATGAACTCTTCTCAGAAATTGATGTCTGC...GCAGCTAGATGAAAGGTGTGGCCAGATAATCACCAAGGAGGACTGGGAGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CAA 90 bp | ACATTTAACTTCCTGGACATGAATTCAGCATTCAACAATTTTCTTTaGGTAGCAGGAGCGACAGAGAGGACAGACATGGAAAGGGGCATT | + |
|
Preference number: 2 (lower is better) Translates to: TFNFLDMNSAFNNFL*VAGATERTDMERGI Trigger: AATGCCCCTTTCCATGTCTGTCCTCTCTGTCGCTCCTGCTACCAAAAGAAAATTGTTGAATGCTGAATTCATGTCCAGGAAGTTAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGCATTCAACAATTTTCTTTTGGTAGCAGGAGCGACAGAGAGGACAGACATAGAGTTCATCTATGTTaGTGTTGTATGAGCACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FSIQQFSFGSRSDREDRHRVHLC*CCMSTG Trigger: TCCTGTGCTCATACAACACCAACATAGATGAACTCT...ATGTCTGTCCTCTCTGTCGCTCCTGCTACCAAAAGAAAATTGTTGAATGCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CCA 72 bp | AGGACAGGAGGACTGTCTCTCTGGGACGCTGGCTGCTaGTTCCTATGGCTGCTTGCCGGCCATCGCCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: RTGGLSLWDAGC*FLWLLAGHRHE Trigger: TTCATGGCGATGGCCGGCAAGCAGCCATAGGAACCAGCAGCCAGCGTCCCAGAGAGACAGTCCTCCTGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CCA 72 bp | GGAACAGATGTGCACAGGACAGGAGGACTGTCTCTCTaGGACGCTGGCTGCTGGTTCCTATGGCTGCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GTDVHRTGGLSL*DAGCWFLWLLA Trigger: GGCAAGCAGCCATAGGAACCAGCAGCCAGCGTCCCAGAGAGACAGTCCTCCTGTCCTGTGCACATCTGTTCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CCA 72 bp | GGCCATCGCCATGAAAGGAGAGTGGAGTCAGGCAGATaGAACATTCATAGATCTCATGGTGAGCAGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GHRHERRVESGR*NIHRSHGEQPV Trigger: CACAGGCTGCTCACCATGAGATCTATGAATGTTCCATCTGCCTGACTCCACTCTCCTTTCATGGCGATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CCA 72 bp | TATGGCTGCTTGCCGGCCATCGCCATGAAAGGAGAGTaGAGTCAGGCAGATGGAACATTCATAGATCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: YGCLPAIAMKGE*SQADGTFIDLM Trigger: CATGAGATCTATGAATGTTCCATCTGCCTGACTCCACTCTCCTTTCATGGCGATGGCCGGCAAGCAGCCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR TCA 72 bp | CAGCCTGTGCTTGGATTTTCTCCCAGTCCTCCTTGGTaGTTATCTGGCCACACCTTTCATCTAGCTGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QPVLGFSPSPPW*LSGHTFHLAAE Trigger: TTCAGCAGCTAGATGAAAGGTGTGGCCAGATAATCACCAAGGAGGACTGGGAGAAAATCCAAGCACAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGAGTCAGGCAGATGGAACATTCATAGATCTCATGGTGAGCAGCCTGTGCTTTCATCTATGTTGGTGTaGTATGAGCACAGGATTCGG | + |
|
Preference number: 3 (lower is better) Translates to: VESGRWNIHRSHGEQPVLSSMLV*YEHRIR Trigger: CCGAATCCTGTGCTCATACAACACCAACATAGATGA...AAGCACAGGCTGCTCACCATGAGATCTATGAATGTTCCATCTGCCTGACTCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAGCATTCAACAATTTTCTTTTGGTAGCAGGAGCGACAGAGAGGACAGACATGTGAGCAGCCTGTGCTaGGATTTTCTCCCAGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FSIQQFSFGSRSDREDRHVSSLC*DFLPVL Trigger: GAGGACTGGGAGAAAATCCAAGCACAGGCTGCTCAC...ATGTCTGTCCTCTCTGTCGCTCCTGCTACCAAAAGAAAATTGTTGAATGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR GCA 72 bp | TTATCTGGCCACACCTTTCATCTAGCTGCTGAAGAATaGTACGGTTTACCGCCAAGCAGACATCAATTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LSGHTFHLAAEE*YGLPPSRHQFL Trigger: CAGAAATTGATGTCTGCTTGGCGGTAAACCGTAGCATTCTTCAGCAGCTAGATGAAAGGTGTGGCCAGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR-3UTR CAA 90 bp | TCTATGTTGGTGTTGTATGAGCACAGGATTCGGTGGCTGATCTCTGTGAACTTTAACTTTCTCCTTAATTaGGCATCCGAAGGCGGGATT | + |
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Preference number: 3 (lower is better) Translates to: SMLVLYEHRIRWLISVNFNFLLN*ASEGGI Trigger: AATCCCGCCTTCGGATGCCAAATTAAGGAGAAAGTT...AAAGTTCACAGAGATCAGCCACCGAATCCTGTGCTCATACAACACCAACATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| 3UTR CCA 72 bp | TCATCTATGTTGGTGTTGTATGAGCACAGGATTCGGTaGCTGATCTCTGTGAACTTTTCCTCAAAGAACTTT | + |
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Preference number: 3 (lower is better) Translates to: SSMLVLYEHRIR*LISVNFSSKNF Trigger: AAAGTTCTTTGAGGAAAAGTTCACAGAGATCAGCCACCGAATCCTGTGCTCATACAACACCAACATAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| CDS-3UTR TCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGTGCCGGCCATCGCCATaGAAGGAGAGTGGAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWCRPSP*KESGVR Trigger: CCTGACTCCACTCTCCTTTCATGGCGATGGCCGGCA...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR CCA 90 bp | AGGCATTGTGGAACAGATGTGCACAGGACAGGAGGACTGTCTCTCTGGGACGCTAGATCATGTAATAGGTaGTCCTGTAAGGCAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: RHCGTDVHRTGGLSLWDARSCNR*SCKATA Trigger: TGCAGTTGCCTTACAGGACCACCTATTACATGATCT...AGCGTCCCAGAGAGACAGTCCTCCTGTCCTGTGCACATCTGTTCCACAATGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| CDS-3UTR CCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAGGCTGCTGGTTCCTATaGCTGCTTGCCGGCCATCGC | + |
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Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHAGCWFL*LLAGHR Trigger: GCGATGGCCGGCAAGCAGCCATAGGAACCAGCAGCC...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR CCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGGGAGGACTGTCTCTCTaGGACGCTGGCTGCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWGGLSL*DAGCWF Trigger: GAACCAGCAGCCAGCGTCCCAGAGAGACAGTCCTCC...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR GCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGCTCTGGGACGCTGGCTaGTGGTTCCTATGGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWLWDAG*WFLWLL Trigger: AAGCAGCCATAGGAACCAGCAGCCAGCGTCCCAGAG...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR CCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAGGAGGACTGTCTCTCTaGGACGCTGGCTGCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHAGGLSL*DAGCWF Trigger: GAACCAGCAGCCAGCGTCCCAGAGAGACAGTCCTCC...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR TCA 90 bp | AGGAGGCAGGCATTGTGGAACAGATGTGCACAGGACAGGAGGACTGTCTCTCTGCTGTTGCATCTCTTTTaGGAGATTTTGACTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RRQALWNRCAQDRRTVSLLLHLF*EILTSS Trigger: AGAAGAAGTCAAAATCTCTCAAAAGAGATGCAACAG...CAGAGAGACAGTCCTCCTGTCCTGTGCACATCTGTTCCACAATGCCTGCCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| CDS-3UTR CCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGAGGAGGCAGGCATTGTaGAACAGATGTGCACAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWRRQAL*NRCAQD Trigger: GTCCTGTGCACATCTGTTCCACAATGCCTGCCTCCT...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR CCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGCAGAGAGGACAGACATaGAAAGGGGCATTGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWQRGQT*KGALSP Trigger: AGGAGACAATGCCCCTTTCCATGTCTGTCCTCTCTG...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR TCA 90 bp | TCTATGTTGGTGTTGTATGAGCACAGGATTCGGTGGCTGATCTCTGTGAACTTTGTAAGGCAACTGCAGTaGCTGCTAAGTTACCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SMLVLYEHRIRWLISVNFVRQLQ*LLSYLC Trigger: ACAAAGGTAACTTAGCAGTCACTGCAGTTGCCTTAC...AAAGTTCACAGAGATCAGCCACCGAATCCTGTGCTCATACAACACCAACATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| CDS-3UTR TCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCACCTATGGAATACATGTaGGCAGGAAAGCAGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHAPMEYM*AGKQHL Trigger: CAGGTGCTGCTTTCCTGCTCACATGTATTCCATAGG...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR TCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGTATGTTGGTGTTGTATaGGCACAGGATTCGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWYVGVV*AQDSVA Trigger: AGCCACCGAATCCTGTGCTCATACAACACCAACATA...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR GCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAATGGTGAGCAGCCTGTaGTTGGATTTTCTCCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHAMVSSL*LDFLPV Trigger: GACTGGGAGAAAATCCAAGCACAGGCTGCTCACCAT...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR CCA 90 bp | AACATTCATAGATCTCATGGTGAGCAGCCTGTGCTTGGATTTTCTCCCAGTCCTTTAATGGTGGTGGTGTaGGGTCTAGAACATATTCCT | + |
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Preference number: 4 (lower is better) Translates to: NIHRSHGEQPVLGFSPSPLMVVV*GLEHIP Trigger: AGGAATATGTTCTAGACCCCACACCACCACCATTAA...AGGACTGGGAGAAAATCCAAGCACAGGCTGCTCACCATGAGATCTATGAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
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| CDS-3UTR CCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGGAGCACAGGATTCGGTaGCTGATCTCTGTGAACTTT | + |
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Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWEHRIR*LISVNF Trigger: AAAGTTCACAGAGATCAGCCACCGAATCCTGTGCTC...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR CCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAGCCATGAAAGGAGAGTaGAGTCAGGCAGATGGAACA | + |
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Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHAAMKGE*SQADGT Trigger: TGTTCCATCTGCCTGACTCCACTCTCCTTTCATGGC...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR TCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGGTAAGGCAACTGCAGTaGCTGCTAAGTTACCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWVRQLQ*LLSYLC Trigger: ACAAAGGTAACTTAGCAGTCACTGCAGTTGCCTTAC...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160383.8 |
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| CDS-3UTR TCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCATATGTTGGTGTTGTATaGGCACAGGATTCGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHAYVGVV*AQDSVA Trigger: AGCCACCGAATCCTGTGCTCATACAACACCAACATA...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGTTTACATATTGGGCATaGCTGAATGGAGTCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWFTYWA*LNGVPL Trigger: CAAGGGGACTCCATTCAGCCATGCCCAATATGTAAA...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAGAGCACAGGATTCGGTaGCTGATCTCTGTGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHAEHRIR*LISVNF Trigger: AAAGTTCACAGAGATCAGCCACCGAATCCTGTGCTC...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| 3UTR CAA 72 bp | ACATCAATTTCTGAGAAGAGTTCATCTATGTTGGTGTaGTATGAGCACAGGATTCGGTGGCTGATCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSISEKSSSMLV*YEHRIRWLISV Trigger: CACAGAGATCAGCCACCGAATCCTGTGCTCATACAACACCAACATAGATGAACTCTTCTCAGAAATTGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGGAGAGATGTCCAAGTTaGAGATCATGTAATAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWERCPS*RSCNRW Trigger: CCACCTATTACATGATCTTCAACTTGGACATCTCTC...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160383.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGAACTTTTCAAAAGCCTaGAGGCATGCCCTATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWNFSKA*RHALWN Trigger: ATTCCATAGGGCATGCCTTCAGGCTTTTGAAAAGTT...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGAGATCATGTAATAGGTaGTCCTGTAAGGCAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWRSCNR*SCKATA Trigger: TGCAGTTGCCTTACAGGACCACCTATTACATGATCT...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160383.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGAAGAGGCCTAGTTTCTaGGCTAAAGTTAATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWKRPSF*AKVNGG Trigger: ACCACCATTAACTTTAGCCCAGAAACTAGGCCTCTT...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCATTTACATATTGGGCATaGCTGAATGGAGTCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHAFTYWA*LNGVPL Trigger: CAAGGGGACTCCATTCAGCCATGCCCAATATGTAAA...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGGTGGAGTCAGGCAGATaGAACATTCATAGATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWVESGR*NIHRSH Trigger: ATGAGATCTATGAATGTTCCATCTGCCTGACTCCAC...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR TCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAGAGAGATGTCCAAGTTaGAGATCATGTAATAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHAERCPS*RSCNRW Trigger: CCACCTATTACATGATCTTCAACTTGGACATCTCTC...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160383.8 |
||
| CDS-3UTR TCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAAACTTTTCAAAAGCCTaGAGGCATGCCCTATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHANFSKA*RHALWN Trigger: ATTCCATAGGGCATGCCTTCAGGCTTTTGAAAAGTT...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAAGATCATGTAATAGGTaGTCCTGTAAGGCAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHARSCNR*SCKATA Trigger: TGCAGTTGCCTTACAGGACCACCTATTACATGATCT...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160383.8 |
||
| CDS-3UTR CCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCATTAATGGTGGTGGTGTaGGGTCTAGAACATATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHALMVVV*GLEHIP Trigger: AGGAATATGTTCTAGACCCCACACCACCACCATTAA...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160383.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGAGAGTTCATCTATGTTaGTGTTGTATGAGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWRVHLC*CCMSTG Trigger: TCCTGTGCTCATACAACACCAACATAGATGAACTCT...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR TCA 90 bp | AACTTTTCCTCAAAGAACTTTCTCCTTAATTTGGCATCCGAAGGCGGGATTATTGAGAGATGTCCAAGTTaGAGATCATGTAATAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFSSKNFLLNLASEGGIIERCPS*RSCNRW Trigger: CCACCTATTACATGATCTTCAACTTGGACATCTCTC...AATAATCCCGCCTTCGGATGCCAAATTAAGGAGAAAGTTCTTTGAGGAAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGCTGTTGCATCTCTTTTaGGAGATTTTGACTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWLLHLF*EILTSS Trigger: AGAAGAAGTCAAAATCTCTCAAAAGAGATGCAACAG...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160383.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGGCAGACATCAATTTCTaGGAAGAGTTCATCTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWADINF*EEFIYV Trigger: AACATAGATGAACTCTTCTCAGAAATTGATGTCTGC...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCATTCTTCTTTACATATTaGGCATGGCTGAATGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHAFFFTY*AWLNGV Trigger: GACTCCATTCAGCCATGCCCAATATGTAAAGAAGAA...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| 3UTR CAA 72 bp | TCTGTGAACTTTTCCTCAAAGAACTTTCTCCTTAATTaGGCATCCGAAGGCGGGATTATTTTCCTCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVNFSSKNFLLN*ASEGGIIFLRF Trigger: AAACCTGAGGAAAATAATCCCGCCTTCGGATGCCAAATTAAGGAGAAAGTTCTTTGAGGAAAAGTTCACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
||
| CDS-3UTR TCA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCACTGTTGCATCTCTTTTaGGAGATTTTGACTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YIITKNSQQCSPLPQTHALLHLF*EILTSS Trigger: AGAAGAAGTCAAAATCTCTCAAAAGAGATGCAACAG...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160383.8 |
||
| CDS CCA 90 bp | CTGCTTGCCGGCCATCGCCATGAAAGGAGAGTGGAGTCAGGCAGATaGAACATTCATAGATCTCATGGTGAGCAGCCTTTTCCTCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLAGHRHERRVESGR*NIHRSHGEQPFPQR Trigger: TCTTTGAGGAAAAGGCTGCTCACCATGAGATCTATGAATGTTCCATCTGCCTGACTCCACTCTCCTTTCATGGCGATGGCCGGCAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162975.2 |
||
| CDS TCA 90 bp | ACCTGGGGATGGAGCTCAAATTCTTCTTTACATATTGGGCATGGCTaGATGGAGTCCCCTTGTAGAAGGGATCTCTGCTTCACTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TWGWSSNSSLHIGHG*MESPCRRDLCFTLS Trigger: GGAGAGAGTGAAGCAGAGATCCCTTCTACAAGGGGACTCCATTCAGCCATGCCCAATATGTAAAGAAGAATTTGAGCTCCATCCCCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000162975.2 ENSMUST00000168460.8 |
||
| CDS CCA 90 bp | GGGGATGGAGCTCAAATTCTTCTTTACATATTGGGCATGGCTGAATaGAGTCCCCTTGTAGAAGGGATCTCTGCTTCACTCTCTCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GDGAQILLYILGMAE*SPLVEGISASLSPT Trigger: AGTGGGAGAGAGTGAAGCAGAGATCCCTTCTACAAGGGGACTCCATTCAGCCATGCCCAATATGTAAAGAAGAATTTGAGCTCCATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000161398.8 ENSMUST00000162975.2 ENSMUST00000168460.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCCAGGAGGCAGGCATTGTGGAACAGATGTGCACAGGACAGGAGGACTGTCGCTGTTGCATCTCTTTaGAGAGATTTTGACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KARRQALWNRCAQDRRTVAVASL*RDFDFF Trigger: GAAGAAGTCAAAATCTCTCAAAAGAGATGCAACAGC...GACAGTCCTCCTGTCCTGTGCACATCTGTTCCACAATGCCTGCCTCCTGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGCCCTCGCCAATAGGCTaGGATCCTGGTGGCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWPSPIG*DPGGTL Trigger: AAGTGTGCCACCAGGATCCAAGCCTATTGGCGAGGG...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCACCCTCGCCAATAGGCTaGGATCCTGGTGGCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: YIITKNSQQCSPLPQTHAPSPIG*DPGGTL Trigger: AAGTGTGCCACCAGGATCCAAGCCTATTGGCGAGGG...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAGCCAGGAGGCAGGCATaGTGGAACAGATGTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: YIITKNSQQCSPLPQTHAARRQA*WNRCAQ Trigger: CTGTGCACATCTGTTCCACAATGCCTGCCTCCTGGC...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAGTGAGCAGCCTGTGCTaGGATTTTCTCCCAGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YIITKNSQQCSPLPQTHAVSSLC*DFLPVL Trigger: GAGGACTGGGAGAAAATCCAAGCACAGGCTGCTCAC...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS CCA 90 bp | TCTCATGGTGAGCAGCCTTTTCCTCAAAGAACTTTCTCCTTAATTTaGCATCCGAAGGCGGGATTATTTTCCTCAGGTTTCTGTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: SHGEQPFPQRTFSLI*HPKAGLFSSGFCTT Trigger: AGTGGTACAGAAACCTGAGGAAAATAATCCCGCCTTCGGATGCCAAATTAAGGAGAAAGTTCTTTGAGGAAAAGGCTGCTCACCATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162975.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGAACTTTCTCCTTAATTaGGCATCCGAAGGCGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWNFLLN*ASEGGI Trigger: AATCCCGCCTTCGGATGCCAAATTAAGGAGAAAGTT...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGTCATCTATGTTGGTGTaGTATGAGCACAGGATTCGG | + |
|
Preference number: 5 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWSSMLV*YEHRIR Trigger: CCGAATCCTGTGCTCATACAACACCAACATAGATGA...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGACATGGAAAGGGGCATaGTCTCCTAAAGAAAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWTWKGA*SPKENS Trigger: GGAGTTTTCTTTAGGAGACAATGCCCCTTTCCATGT...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | CGAAGGCGGGATTATTTTCCTCAGGTTTCTGTACCACTTTCTAACGATGTACCCACTGCTAAGTTACCTTaGTTAGATGAACGATCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RRRDYFPQVSVPLSNDVPTAKLP*LDERSL Trigger: TAAGGATCGTTCATCTAACAAAGGTAACTTAGCAGT...GGGTACATCGTTAGAAAGTGGTACAGAAACCTGAGGAAAATAATCCCGCCTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160383.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGCACTCTTGTTTGATATaGGTTCTTTCTACAGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWHSCLI*VLSTEG Trigger: CCCCTCTGTAGAAAGAACCAATATCAAACAAGAGTG...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAAACTTTCTCCTTAATTaGGCATCCGAAGGCGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: YIITKNSQQCSPLPQTHANFLLN*ASEGGI Trigger: AATCCCGCCTTCGGATGCCAAATTAAGGAGAAAGTT...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGAAGAGTTCATCTATGTaGGTGTTGTATGAGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWKSSSM*VLYEHR Trigger: CCTGTGCTCATACAACACCAACATAGATGAACTCTT...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAACATGGAAAGGGGCATaGTCTCCTAAAGAAAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: YIITKNSQQCSPLPQTHATWKGA*SPKENS Trigger: GGAGTTTTCTTTAGGAGACAATGCCCCTTTCCATGT...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGTTCAACAATTTTCTTTaGGTAGCAGGAGCGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWFNNFL*VAGATE Trigger: CTCTGTCGCTCCTGCTACCAAAAGAAAATTGTTGAA...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGATTCTTCTTTACATATaGGGCATGGCTGAATGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWILLYI*GMAEWS Trigger: ACTCCATTCAGCCATGCCCAATATGTAAAGAAGAAT...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAAAGAGTTCATCTATGTaGGTGTTGTATGAGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: YIITKNSQQCSPLPQTHAKSSSM*VLYEHR Trigger: CCTGTGCTCATACAACACCAACATAGATGAACTCTT...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGATAGCCTTTACCCCTTTCTTGTTCTAGTCAGACATTTAACTTCCTGGACTGCTAAGTTACCTTaGTTAGATGAACGATCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KQDSLYPFLVLVRHLTSWTAKLP*LDERSL Trigger: TAAGGATCGTTCATCTAACAAAGGTAACTTAGCAGT...CCAGGAAGTTAAATGTCTGACTAGAACAAGAAAGGGGTAAAGGCTATCCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160383.8 |
||
| CDS-3UTR CAA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAGCTGTTGCATCTCTTTaGAGAGATTTTGACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YIITKNSQQCSPLPQTHAAVASL*RDFDFF Trigger: GAAGAAGTCAAAATCTCTCAAAAGAGATGCAACAGC...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160383.8 |
||
| CDS-3UTR CAA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAATTCTTCTTTACATATaGGGCATGGCTGAATGGAGT | + |
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Preference number: 5 (lower is better) Translates to: YIITKNSQQCSPLPQTHAILLYI*GMAEWS Trigger: ACTCCATTCAGCCATGCCCAATATGTAAAGAAGAAT...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 |
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| CDS-3UTR CAA 90 bp | TATATAATCACAAAGAACAGTCAGCAATGTAGTCCTCTACCCCAAACCCATGCAACTGCTAAGTTACCTTaGTTAGATGAACGATCCTTA | + |
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Preference number: 5 (lower is better) Translates to: YIITKNSQQCSPLPQTHATAKLP*LDERSL Trigger: TAAGGATCGTTCATCTAACAAAGGTAACTTAGCAGT...TGCATGGGTTTGGGGTAGAGGACTACATTGCTGACTGTTCTTTGTGATTATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160383.8 |
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| CDS CCA 72 bp | AGTGGCAACGGGGGAGGTGGCAAGAGGCCTAGTTTCTaGGCTAAAGTTAATGGTGGTGGTGTGGGGTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: SGNGGGGKRPSF*AKVNGGGVGSR Trigger: TCTAGACCCCACACCACCACCATTAACTTTAGCCCAGAAACTAGGCCTCTTGCCACCTCCCCCGTTGCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000160888.8 ENSMUST00000161398.8 ENSMUST00000162975.2 ENSMUST00000168460.8 |
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| CDS TCA 72 bp | TTCAAAAGCCTGAAGGCATGCCCTATGGAATACATGTaGGCAGGAAAGCAGCACCTGGGGATGGAGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FKSLKACPMEYM*AGKQHLGMELK Trigger: TTTGAGCTCCATCCCCAGGTGCTGCTTTCCTGCTCACATGTATTCCATAGGGCATGCCTTCAGGCTTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000162975.2 ENSMUST00000168460.8 |
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| CDS CCA 72 bp | GGCCATCGCCATGAAAGGAGAGTGGAGTCAGGCAGATaGAACATTCATAGATCTCATGGTGAGCAGCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GHRHERRVESGR*NIHRSHGEQPF Trigger: AAAAGGCTGCTCACCATGAGATCTATGAATGTTCCATCTGCCTGACTCCACTCTCCTTTCATGGCGATGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162975.2 |
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| CDS CAA 72 bp | GCACCTGGGGATGGAGCTCAAATTCTTCTTTACATATaGGGCATGGCTGAATGGAGTCCCCTTGTAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: APGDGAQILLYI*GMAEWSPLVEG Trigger: CCCTTCTACAAGGGGACTCCATTCAGCCATGCCCAATATGTAAAGAAGAATTTGAGCTCCATCCCCAGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000162975.2 ENSMUST00000168460.8 |
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| CDS CAA 90 bp | AGGAAAGCAGCACCTGGGGATGGAGCTCAAATTCTTCTTTACATATaGGGCATGGCTGAATGGAGTCCCCTTGTAGAAGGGATCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RKAAPGDGAQILLYI*GMAEWSPLVEGISA Trigger: AGCAGAGATCCCTTCTACAAGGGGACTCCATTCAGCCATGCCCAATATGTAAAGAAGAATTTGAGCTCCATCCCCAGGTGCTGCTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000162975.2 ENSMUST00000168460.8 |
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| CDS TCA 72 bp | TGGAGCTCAAATTCTTCTTTACATATTGGGCATGGCTaGATGGAGTCCCCTTGTAGAAGGGATCTCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: WSSNSSLHIGHG*MESPCRRDLCF Trigger: GAAGCAGAGATCCCTTCTACAAGGGGACTCCATTCAGCCATGCCCAATATGTAAAGAAGAATTTGAGCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000161398.8 ENSMUST00000162975.2 ENSMUST00000168460.8 |
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| CDS CCA 72 bp | GCTCAAATTCTTCTTTACATATTGGGCATGGCTGAATaGAGTCCCCTTGTAGAAGGGATCTCTGCTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: AQILLYILGMAE*SPLVEGISASL Trigger: GAGTGAAGCAGAGATCCCTTCTACAAGGGGACTCCATTCAGCCATGCCCAATATGTAAAGAAGAATTTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000161398.8 ENSMUST00000162975.2 ENSMUST00000168460.8 |
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| CDS TCA 72 bp | CTGAACAGGCGAGCCCCATCATGTATCACTCTTGTTTaGTATTGGTTCTTTCTACAGAGGGGACAGGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: LNRRAPSCITLV*YWFFLQRGQVF Trigger: AAAAACCTGTCCCCTCTGTAGAAAGAACCAATATCAAACAAGAGTGATACATGATGGGGCTCGCCTGTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000162975.2 ENSMUST00000168460.8 |
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| CDS CAA 72 bp | TCTGAACAGGCGAGCCCCATCATGTATCACTCTTGTTaGATATTGGTTCTTTCTACAGAGGGGACAGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SEQASPIMYHSC*ILVLSTEGTGF Trigger: AAAACCTGTCCCCTCTGTAGAAAGAACCAATATCAAACAAGAGTGATACATGATGGGGCTCGCCTGTTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001247.12 ENSMUST00000160246.8 ENSMUST00000162975.2 ENSMUST00000168460.8 |
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