Pregenerated sensors for RNF26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053128Ensembl transcript IDs: ENSMUST00000056328.6, ENSMUST00000065379.5, ENSMUST00000160985.2, ENSMUST00000215685.2, ENSMUST00000216511.2
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCGGCGGCAGAGCGGGCAGTTGCGATGGTAAACAGGGTGGCGCATaGGGATCTCAGTGCAAGCCTGGCACAGGCACAGGTGCCGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: CGGRAGSCDGKQGGA*GSQCKPGTGTGAGR Trigger: CCTGCCGGCACCTGTGCCTGTGCCAGGCTTGCACTGAGATCCTCATGCGCCACCCTGTTTACCATCGCAACTGCCCGCTCTGCCGCCGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR CCA 90 bp | GAAGCAGAGAAGGACAGCCCTAGAGGCAGGCATCTGGGTGGGCCCTaGCAGGCGCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: EAEKDSPRGRHLGGP*QAQHKSPPQSLRAL Trigger: AAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGCGCCTGCCAGGGCCCACCCAGATGCCTGCCTCTAGGGCTGTCCTTCTCTGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR GCA 90 bp | CCTGAGGCCCAGCCCCTCGTTTGGACCCAAGTGAAAAGTGCGGGATaGCCTCTCCACTGCCGGAGAGAGCCCAGGAGGAATGCTATGTTC | + |
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Preference number: 1 (lower is better) Translates to: PEAQPLVWTQVKSAG*PLHCRREPRRNAMF Trigger: GAACATAGCATTCCTCCTGGGCTCTCTCCGGCAGTGGAGAGGGCATCCCGCACTTTTCACTTGGGTCCAAACGAGGGGCTGGGCCTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR TCA 90 bp | TTCGGGGGCAAAGAAGACTCAGGCCAGAACCCAGAGGCAAAGTGTTaGTGCTGTCCCGGTGTGTGGAGCGCAGAGGATGAGCAGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: FGGKEDSGQNPEAKC*CCPGVWSAEDEQAG Trigger: CCCTGCCTGCTCATCCTCTGCGCTCCACACACCGGGACAGCATCAACACTTTGCCTCTGGGTTCTGGCCTGAGTCTTCTTTGCCCCCGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000160985.2 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR GCA 90 bp | AGCTTCCATGGGTCCTGCCCAGCGGCAGGCTCGTCCTCGTTGAGTTaGTCTCGGCCTCTAGCTGGTGCAGTTCTGATGACCTCCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SFHGSCPAAGSSSLS*SRPLAGAVLMTSSS Trigger: AGAAGAGGAGGTCATCAGAACTGCACCAGCTAGAGGCCGAGAGCAACTCAACGAGGACGAGCCTGCCGCTGGGCAGGACCCATGGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR GCA 90 bp | CACTTCTTCCGCTCTTCTTGCTCCTTCAACAGCTTCCATGGGTCCTaGCCAGCGGCAGGCTCGTCCTCGTTGAGTTGCTCTCGGCCTCTA | + |
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Preference number: 1 (lower is better) Translates to: HFFRSSCSFNSFHGS*PAAGSSSLSCSRPL Trigger: TAGAGGCCGAGAGCAACTCAACGAGGACGAGCCTGCCGCTGGGCAGGACCCATGGAAGCTGTTGAAGGAGCAAGAAGAGCGGAAGAAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR CCA 90 bp | GATAACACACTTCTTCCGCTCTTCTTGCTCCTTCAACAGCTTCCATaGGTCCTGCCCAGCGGCAGGCTCGTCCTCGTTGAGTTGCTCTCG | + |
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Preference number: 1 (lower is better) Translates to: DNTLLPLFLLLQQLP*VLPSGRLVLVELLS Trigger: CGAGAGCAACTCAACGAGGACGAGCCTGCCGCTGGGCAGGACCCATGGAAGCTGTTGAAGGAGCAAGAAGAGCGGAAGAAGTGTGTTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR CCA 90 bp | CACAGGTGCCGGCAGGGCAGAAGCAGCACCGTTTTGCTCTGGTCCTaGCAGATAACACACTTCTTCCGCTCTTCTTGCTCCTTCAACAGC | + |
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Preference number: 1 (lower is better) Translates to: HRCRQGRSSTVLLWS*QITHFFRSSCSFNS Trigger: GCTGTTGAAGGAGCAAGAAGAGCGGAAGAAGTGTGTTATCTGCCAGGACCAGAGCAAAACGGTGCTGCTTCTGCCCTGCCGGCACCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR GCA 90 bp | ACATCACACTTCCAAAGACCCCAGCAGCATCTTCCAGACAGAACCTaGCAAGGGCACAGTGTGAACACCTGGGGAAACGGACACATCTGG | + |
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Preference number: 1 (lower is better) Translates to: TSHFQRPQQHLPDRT*QGHSVNTWGNGHIW Trigger: CCAGATGTGTCCGTTTCCCCAGGTGTTCACACTGTGCCCTTGGCAGGTTCTGTCTGGAAGATGCTGCTGGGGTCTTTGGAAGTGTGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
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| 3UTR GCA 90 bp | TCAAGTTGGGAGTCTTTAAAAGACAGTGACAGGCAGAAGGGCATCTaGAAGTTTCTACTCCCAGACCTACCAGGGCAGAGGCTCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SSWESLKDSDRQKGI*KFLLPDLPGQRLWL Trigger: CAGCCAGAGCCTCTGCCCTGGTAGGTCTGGGAGTAGAAACTTGCAGATGCCCTTCTGCCTGTCACTGTCTTTTAAAGACTCCCAACTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR CCA 90 bp | GAAGGAAGACAGCTTTCTAACCAAGAAAGAGGAAGCAATGGCTGCTaGGATAGCTCCCTCCTTGGTAGACGACATGGCTTGCCTCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: EGRQLSNQERGSNGC*DSSLLGRRHGLPQD Trigger: GTCCTGAGGCAAGCCATGTCGTCTACCAAGGAGGGAGCTATCCCAGCAGCCATTGCTTCCTCTTTCTTGGTTAGAAAGCTGTCTTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| 3UTR GCA 90 bp | CCGGGATGCTCCCAGCAAAGTGAGGACCACACAGTTCACTGCTTTTaGCATAAGTGCTGCATCCTAGCTTACCCACTTGTTAAACTTCTC | + |
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Preference number: 1 (lower is better) Translates to: PGCSQQSEDHTVHCF*HKCCILAYPLVKLL Trigger: GAGAAGTTTAACAAGTGGGTAAGCTAGGATGCAGCACTTATGGCAAAAGCAGTGAACTGTGTGGTCCTCACTTTGCTGGGAGCATCCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| 3UTR GCA 90 bp | TTGTATCCGGGATGCTCCCAGCAAAGTGAGGACCACACAGTTCACTaGTTTTGCCATAAGTGCTGCATCCTAGCTTACCCACTTGTTAAA | + |
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Preference number: 1 (lower is better) Translates to: LYPGCSQQSEDHTVH*FCHKCCILAYPLVK Trigger: TTTAACAAGTGGGTAAGCTAGGATGCAGCACTTATGGCAAAAGCAGTGAACTGTGTGGTCCTCACTTTGCTGGGAGCATCCCGGATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTCCATGGGTCCTGCCCAGCGGCAGGCTCGTCCTCGTTGAGTTGCTCTCGGTGGAGCGCAGAGGATaGGCAGGCAGGGAGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: QLPWVLPSGRLVLVELLSVERRG*AGREGV Trigger: GACTCCCTCCCTGCCTGCTCATCCTCTGCGCTCCAC...CGAGAGCAACTCAACGAGGACGAGCCTGCCGCTGGGCAGGACCCATGGAAGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR CAA 90 bp | CCTGGCAGGCGCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTaGCATAGTGACATACTCACCACCCTCAGCATCTCAGGGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PGRRSTRAHHRVSGP*HSDILTTLSISGPH Trigger: GTGGGGCCCTGAGATGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGCGCCTGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR CAA 90 bp | CAGCTTCCATGGGTCCTGCCCAGCGGCAGGCTCGTCCTCGTTGAGTaGCTCTCGGCCTCTAGCTGGTGCAGTTCTGATGACCTCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: QLPWVLPSGRLVLVE*LSASSWCSSDDLLF Trigger: GAAGAGGAGGTCATCAGAACTGCACCAGCTAGAGGCCGAGAGCAACTCAACGAGGACGAGCCTGCCGCTGGGCAGGACCCATGGAAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCTGCTGTCGAATCTGTCCTCCACCTAGGCTCCAGACAGGCACATGGATGGTGGAGCGCAGAGGATaGGCAGGCAGGGAGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: CLCCRICPPPRLQTGTWMVERRG*AGREGV Trigger: GACTCCCTCCCTGCCTGCTCATCCTCTGCGCTCCAC...CATCCATGTGCCTGTCTGGAGCCTAGGTGGAGGACAGATTCGACAGCAGAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| 3UTR-3UTR CCA 90 bp | CCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCATGGCGTGGCGTGGCGTaGCCTGGGGGAAAGGACCAA | + |
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Preference number: 2 (lower is better) Translates to: PTTESQGPCIVTYSPPSAWRGVA*PGGKDQ Trigger: TTGGTCCTTTCCCCCAGGCCACGCCACGCCACGCCA...TGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR CAA 90 bp | TTCAACAGCTTCCATGGGTCCTGCCCAGCGGCAGGCTCGTCCTCGTaGAGTTGCTCTCGGCCTCTAGCTGGTGCAGTTCTGATGACCTCC | + |
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Preference number: 2 (lower is better) Translates to: FNSFHGSCPAAGSSS*SCSRPLAGAVLMTS Trigger: GGAGGTCATCAGAACTGCACCAGCTAGAGGCCGAGAGCAACTCAACGAGGACGAGCCTGCCGCTGGGCAGGACCCATGGAAGCTGTTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR CAA 90 bp | GATGAGCAGGCAGGGAGGGAGTCCTCAGAGGTAGACATTGAGGGTTaGCAGGATGCTGCGGCGGCAGAGCGGGCAGTTGCGATGGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: DEQAGRESSEVDIEG*QDAAAAERAVAMVN Trigger: GTTTACCATCGCAACTGCCCGCTCTGCCGCCGCAGCATCCTGCAAACCCTCAATGTCTACCTCTGAGGACTCCCTCCCTGCCTGCTCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCATCTCAGGGGTGGAGCGCAGAGGATaGGCAGGCAGGGAGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: RVSGPLHSDILTTLSISGVERRG*AGREGV Trigger: GACTCCCTCCCTGCCTGCTCATCCTCTGCGCTCCAC...CCCTGAGATGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGTCCTGGGTGGAGCGCAGAGGATaGGCAGGCAGGGAGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: LCPTQTGVFQSIPSYTSWVERRG*AGREGV Trigger: GACTCCCTCCCTGCCTGCTCATCCTCTGCGCTCCAC...CCAGGACGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000160985.2 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR GCA 90 bp | GACCGACTAAATGGAGCTATGACCCCTGAGGCCCAGCCCCTCGTTTGGACCCAAGGCAGAGCGGGCAGTTaGGATGGTAAACAGGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: DRLNGAMTPEAQPLVWTQGRAGS*DGKQGG Trigger: GCCACCCTGTTTACCATCGCAACTGCCCGCTCTGCC...TTGGGTCCAAACGAGGGGCTGGGCCTCAGGGGTCATAGCTCCATTTAGTCGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGTGACAGGCAGAAGGGCATCTGCAAGTTTCTACTCCCAGACCTACCAGAGGCAGGCATCTGGGTaGGCCCTGGCAGGCGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: KTVTGRRASASFYSQTYQRQASG*ALAGAA Trigger: TGCTGCGCCTGCCAGGGCCCACCCAGATGCCTGCCT...CTGGTAGGTCTGGGAGTAGAAACTTGCAGATGCCCTTCTGCCTGTCACTGTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAATGGAGCTATGACCCCTGAGGCCCAGCCCCTCGTTTGGACCCAAGTGAAACCCATGGAGCTGGGGTaGCTGAAGGTGAATGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LNGAMTPEAQPLVWTQVKPMELG*LKVNGP Trigger: GGGACCATTCACCTTCAGGCACCCCAGCTCCATGGG...TTTCACTTGGGTCCAAACGAGGGGCTGGGCCTCAGGGGTCATAGCTCCATTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGTGACAGGCAGAAGGGCATCTGCAAGTTTCTACTCCCAGACCTACCAGTGGCGTGGCGTGGCGTaGCCTGGGGGAAAGGACCAA | + |
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Preference number: 2 (lower is better) Translates to: KTVTGRRASASFYSQTYQWRGVA*PGGKDQ Trigger: TTGGTCCTTTCCCCCAGGCCACGCCACGCCACGCCA...CTGGTAGGTCTGGGAGTAGAAACTTGCAGATGCCCTTCTGCCTGTCACTGTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAAAGACCCCAGCAGCATCTTCCAGACAGAACCTGCCAAGGGCACAGTGTAACGGACACATCTGGTaGTACCCGGGCCATCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LPKTPAASSRQNLPRAQCNGHIW*YPGHQW Trigger: CCACTGATGGCCCGGGTACCACCAGATGTGTCCGTT...ACACTGTGCCCTTGGCAGGTTCTGTCTGGAAGATGCTGCTGGGGTCTTTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
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| 3UTR CAA 90 bp | GTGGCACAAATACCTGTGTCACTTGGGGCCTGTGTGTGCTCCTGGTaGGCCAACCTCACGAAGGAAGACAGCTTTCTAACCACCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: VAQIPVSLGACVCSW*ANLTKEDSFLTTLS Trigger: GCTGAGGGTGGTTAGAAAGCTGTCTTCCTTCGTGAGGTTGGCCAACCAGGAGCACACACAGGCCCCAAGTGACACAGGTATTTGTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160985.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACTGTAGGCATTGGAACAGCAAAGTCTTCTCTAACCATCTTCTGTTGTGGCGTGGAGCGCAGAGGATaGGCAGGCAGGGAGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: STVGIGTAKSSLTIFCCGVERRG*AGREGV Trigger: GACTCCCTCCCTGCCTGCTCATCCTCTGCGCTCCAC...GCCACAACAGAAGATGGTTAGAGAAGACTTTGCTGTTCCAATGCCTACAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAATGGAGCTATGACCCCTGAGGCCCAGCCCCTCGTTTGGACCCAAGTGAAATCAGGGATAAACTCCTaGCTCCAGGTCCTGGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: LNGAMTPEAQPLVWTQVKSGINS*LQVLVK Trigger: CTTGACCAGGACCTGGAGTCAGGAGTTTATCCCTGA...TTTCACTTGGGTCCAAACGAGGGGCTGGGCCTCAGGGGTCATAGCTCCATTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCACCCCTGTACTCAGGGATAAACTCCTGACTCCAGGTCCTGGTCAAGTTGACCCAAGTGAAAAGTaGGGGATGCCCTCTCCACTG | + |
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Preference number: 2 (lower is better) Translates to: SCTPVLRDKLLTPGPGQVDPSEK*GMPSPL Trigger: CAGTGGAGAGGGCATCCCGCACTTTTCACTTGGGTC...AACTTGACCAGGACCTGGAGTCAGGAGTTTATCCCTGAGTACAGGGGTGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR CCA 90 bp | GATGAGGCACATCACACTTCCAAAGACCCCAGCAGCATCTTCCAGACAGAACCTGCCTGTGTGTGCTCCTaGTTGGCCAACCTCACGAAG | + |
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Preference number: 2 (lower is better) Translates to: DEAHHTSKDPSSIFQTEPACVCS*LANLTK Trigger: CTTCGTGAGGTTGGCCAACCAGGAGCACACACAGGC...AGGTTCTGTCTGGAAGATGCTGCTGGGGTCTTTGGAAGTGTGATGTGCCTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCACCCCTGTACTCAGGGATAAACTCCTGACTCCAGGTCCTGGTCAAGTTCTCAGAGGTAGACATTaGGGGTTTGCAGGATGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SCTPVLRDKLLTPGPGQVLRGRH*GFAGCC Trigger: GCAGCATCCTGCAAACCCTCAATGTCTACCTCTGAG...AACTTGACCAGGACCTGGAGTCAGGAGTTTATCCCTGAGTACAGGGGTGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCACACGTCCTGGATATATaGCTTGAGGCTTGGCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: AAQEPTTESQGPCIVTYSHVLDI*LEAWQS Trigger: ACTCTGCCAAGCCTCAAGCCATATATCCAGGACGTG...TGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR CCA 90 bp | AAATACCTGTGTCACTTGGGGCCTGTGTGTGCTCCTGGTTGGCCAACCTCACGACACGTCCTGGATATATaGCTTGAGGCTTGGCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: KYLCHLGPVCAPGWPTSRHVLDI*LEAWQS Trigger: ACTCTGCCAAGCCTCAAGCCATATATCCAGGACGTG...TCGTGAGGTTGGCCAACCAGGAGCACACACAGGCCCCAAGTGACACAGGTATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGTCCTGGAGCACCGTTTTGCTCTaGTCCTGGCAGATAACACAC | + |
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Preference number: 2 (lower is better) Translates to: LCPTQTGVFQSIPSYTSWSTVLL*SWQITH Trigger: GTGTGTTATCTGCCAGGACCAGAGCAAAACGGTGCT...CCAGGACGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| 3UTR CAA 90 bp | AGCAATGGCTGCTGGGATAGCTCCCTCCTTGGTAGACGACATGGCTaGCCTCAGGACCTTAGAGACGATTTTCTAGTGGTCTTCATGCCT | + |
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Preference number: 2 (lower is better) Translates to: SNGCWDSSLLGRRHG*PQDLRDDFLVVFMP Trigger: AGGCATGAAGACCACTAGAAAATCGTCTCTAAGGTCCTGAGGCAAGCCATGTCGTCTACCAAGGAGGGAGCTATCCCAGCAGCCATTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| 3UTR CAA 90 bp | GTGGCACAAATACCTGTGTCACTTGGGGCCTGTGTGTGCTCCTGGTaGGCCAACCTCACGAAGGAAGACAGCTTTCTAACCAAGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: VAQIPVSLGACVCSW*ANLTKEDSFLTKKE Trigger: CTCTTTCTTGGTTAGAAAGCTGTCTTCCTTCGTGAGGTTGGCCAACCAGGAGCACACACAGGCCCCAAGTGACACAGGTATTTGTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| 3UTR-3UTR TCA 90 bp | CTAAATGGAGCTATGACCCCTGAGGCCCAGCCCCTCGTTTGGACCCAAGTGAAAGTCTTTAAAAGACAGTaGCAGGCAGAAGGGCATCTG | + |
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Preference number: 2 (lower is better) Translates to: LNGAMTPEAQPLVWTQVKVFKRQ*QAEGHL Trigger: CAGATGCCCTTCTGCCTGTCACTGTCTTTTAAAGAC...TTTCACTTGGGTCCAAACGAGGGGCTGGGCCTCAGGGGTCATAGCTCCATTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR CCA 90 bp | AGAATCAAGATCACTCTAAGGCCCATGAGTTTCCAAAATCCTCAAACAACACTGAGGCAGGCATCTGGGTaGGCCCTGGCAGGCGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RIKITLRPMSFQNPQTTLRQASG*ALAGAA Trigger: TGCTGCGCCTGCCAGGGCCCACCCAGATGCCTGCCT...CAGTGTTGTTTGAGGATTTTGGAAACTCATGGGCCTTAGAGTGATCTTGATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAATGGAGCTATGACCCCTGAGGCCCAGCCCCTCGTTTGGACCCAAGTGAAAATGCCATGTAGGGAATaGGTAGACATCTGGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LNGAMTPEAQPLVWTQVKMPCRE*VDIWLF Trigger: GAACAACCAGATGTCTACTCATTCCCTACATGGCAT...TTTCACTTGGGTCCAAACGAGGGGCTGGGCCTCAGGGGTCATAGCTCCATTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCCTCAGCATCTCAGGGCCCCACACAGGATTTAGAGAAAGTGTTACTCTGTCACGTCCTGGATATATaGCTTGAGGCTTGGCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: PPSASQGPTQDLEKVLLCHVLDI*LEAWQS Trigger: ACTCTGCCAAGCCTCAAGCCATATATCCAGGACGTG...ACAGAGTAACACTTTCTCTAAATCCTGTGTGGGGCCCTGAGATGCTGAGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056328.6 ENSMUST00000160985.2 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAATCAAGATCACTCTAAGGCCCATGAGTTTCCAAAATCCTCAAACAACACTCTAGAGGCAGGCATCTaGGTGGGCCCTGGCAGGCGC | + |
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Preference number: 2 (lower is better) Translates to: KNQDHSKAHEFPKSSNNTLEAGI*VGPGRR Trigger: GCGCCTGCCAGGGCCCACCCAGATGCCTGCCTCTAG...AGTGTTGTTTGAGGATTTTGGAAACTCATGGGCCTTAGAGTGATCTTGATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGTGACAGGCAGAAGGGCATCTGCAAGTTTCTACTCCCAGACCTACCAGCCAGGGCAGAGGCTCTaGCTGAACATAAAGGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: KTVTGRRASASFYSQTYQPGQRL*LNIKVQ Trigger: TTGAACCTTTATGTTCAGCCAGAGCCTCTGCCCTGG...CTGGTAGGTCTGGGAGTAGAAACTTGCAGATGCCCTTCTGCCTGTCACTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCAGTTTTGCTCTGGTCCTaGCAGATAACACACTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: AAQEPTTESQGPCIVTYSVLLWS*QITHFF Trigger: GAAGAAGTGTGTTATCTGCCAGGACCAGAGCAAAAC...TGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| 3UTR CAA 90 bp | CACTGTAGGCATTGGAACAGCAAAGTCTTCTCTAACCATCTTCTGTaGTGGCACAAATACCTGTGTCACTTGGGGCCTGTGTGTGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: HCRHWNSKVFSNHLL*WHKYLCHLGPVCAP Trigger: AGGAGCACACACAGGCCCCAAGTGACACAGGTATTTGTGCCACAACAGAAGATGGTTAGAGAAGACTTTGCTGTTCCAATGCCTACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATCAAGATCACTCTAAGGCCCATGAGTTTCCAAAATCCTCAAACAACACTGCAAACAACACTGATGTaGCGTGGCGTGGCGTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RIKITLRPMSFQNPQTTLQTTLM*RGVAWP Trigger: AGGCCACGCCACGCCACGCCACATCAGTGTTGTTTG...CAGTGTTGTTTGAGGATTTTGGAAACTCATGGGCCTTAGAGTGATCTTGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTCTTTTAGCCAAGATGTTTAGAGATGAGGCACATCACACTTCCAAAGACTGTGGCCAGGTCATCTaGCCCATCACCCTCAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: FILLAKMFRDEAHHTSKDCGQVI*PITLSI Trigger: GATGCTGAGGGTGATGGGTCAGATGACCTGGCCACA...GTCTTTGGAAGTGTGATGTGCCTCATCTCTAAACATCTTGGCTAAAAGAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| 3UTR-3UTR CCA 90 bp | AAGAATCAAGATCACTCTAAGGCCCATGAGTTTCCAAAATCCTCAAACAACACTCTCTCGGCCTCTAGCTaGTGCAGTTCTGATGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: KNQDHSKAHEFPKSSNNTLSASS*CSSDDL Trigger: GAGGTCATCAGAACTGCACCAGCTAGAGGCCGAGAG...AGTGTTGTTTGAGGATTTTGGAAACTCATGGGCCTTAGAGTGATCTTGATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| 3UTR CCA 72 bp | AAGGACAGCCCTAGAGGCAGGCATCTGGGTGGGCCCTaGCAGGCGCAGCACAAGAGCCCACCACAGAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KDSPRGRHLGGP*QAQHKSPPQSL Trigger: GAGACTCTGTGGTGGGCTCTTGTGCTGCGCCTGCCAGGGCCCACCCAGATGCCTGCCTCTAGGGCTGTCCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| 3UTR GCA 72 bp | GGGTCCTGCCCAGCGGCAGGCTCGTCCTCGTTGAGTTaGTCTCGGCCTCTAGCTGGTGCAGTTCTGATGACC | + |
|
Preference number: 3 (lower is better) Translates to: GSCPAAGSSSLS*SRPLAGAVLMT Trigger: GGTCATCAGAACTGCACCAGCTAGAGGCCGAGAGCAACTCAACGAGGACGAGCCTGCCGCTGGGCAGGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| 3UTR TCA 72 bp | AGAGCGGGCAGTTGCGATGGTAAACAGGGTGGCGCATaGGGATCTCAGTGCAAGCCTGGCACAGGCACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RAGSCDGKQGGA*GSQCKPGTGTG Trigger: ACCTGTGCCTGTGCCAGGCTTGCACTGAGATCCTCATGCGCCACCCTGTTTACCATCGCAACTGCCCGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| 3UTR GCA 72 bp | CGCTCTTCTTGCTCCTTCAACAGCTTCCATGGGTCCTaGCCAGCGGCAGGCTCGTCCTCGTTGAGTTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RSSCSFNSFHGS*PAAGSSSLSCS Trigger: AGAGCAACTCAACGAGGACGAGCCTGCCGCTGGGCAGGACCCATGGAAGCTGTTGAAGGAGCAAGAAGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCATCTCAGGGCTCGTCCTCGTTGAGTaGCTCTCGGCCTCTAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RVSGPLHSDILTTLSISGLVLVE*LSASSW Trigger: CCAGCTAGAGGCCGAGAGCAACTCAACGAGGACGAG...CCCTGAGATGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| 3UTR GCA 72 bp | GCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTaGATAGTGACATACTCACCACCCTCAGCATCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AAQEPTTESQGP*IVTYSPPSASQ Trigger: CTGAGATGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| 3UTR CCA 72 bp | CGGCAGGGCAGAAGCAGCACCGTTTTGCTCTGGTCCTaGCAGATAACACACTTCTTCCGCTCTTCTTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RQGRSSTVLLWS*QITHFFRSSCS Trigger: GGAGCAAGAAGAGCGGAAGAAGTGTGTTATCTGCCAGGACCAGAGCAAAACGGTGCTGCTTCTGCCCTGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| 3UTR CCA 72 bp | AGGTGCCGGCAGGGCAGAAGCAGCACCGTTTTGCTCTaGTCCTGGCAGATAACACACTTCTTCCGCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RCRQGRSSTVLL*SWQITHFFRSS Trigger: AGAAGAGCGGAAGAAGTGTGTTATCTGCCAGGACCAGAGCAAAACGGTGCTGCTTCTGCCCTGCCGGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAAGACCCCAGCAGCATCTTCCAGACAGAACCTGCCAAGGGCACAGTGTGTGTGTGTGCTCCTGGTaGGCCAACCTCACGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FQRPQQHLPDRTCQGHSVCVCSW*ANLTKE Trigger: TTCCTTCGTGAGGTTGGCCAACCAGGAGCACACACA...CACACTGTGCCCTTGGCAGGTTCTGTCTGGAAGATGCTGCTGGGGTCTTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
||
| 3UTR TCA 72 bp | AGCATCTTCCAGACAGAACCTGCCAAGGGCACAGTGTaGACACCTGGGGAAACGGACACATCTGGTGGTACC | + |
|
Preference number: 3 (lower is better) Translates to: SIFQTEPAKGTV*TPGETDTSGGT Trigger: GGTACCACCAGATGTGTCCGTTTCCCCAGGTGTTCACACTGTGCCCTTGGCAGGTTCTGTCTGGAAGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
||
| 3UTR CCA 72 bp | ACCATCTTCTGTTGTGGCACAAATACCTGTGTCACTTaGGGCCTGTGTGTGCTCCTGGTTGGCCAACCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TIFCCGTNTCVT*GLCVLLVGQPH Trigger: GTGAGGTTGGCCAACCAGGAGCACACACAGGCCCCAAGTGACACAGGTATTTGTGCCACAACAGAAGATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGCACCCCTGTACTCAGGGATAAACTCCTGACTCCAGGTCCTGGTCAAGTTAGAGTCTCAGGGCCCTaGCATAGTGACATACTCACC | + |
|
Preference number: 3 (lower is better) Translates to: SCTPVLRDKLLTPGPGQVRVSGP*HSDILT Trigger: GGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCT...AACTTGACCAGGACCTGGAGTCAGGAGTTTATCCCTGAGTACAGGGGTGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| 3UTR TCA 72 bp | CCAGGAGGAATGCTATGTTCTATGCCATGTAGGGAATaGGTAGACATCTGGTTGTTCCTTCCGAGGCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: PGGMLCSMPCRE*VDIWLFLPRLP Trigger: GGGGAGCCTCGGAAGGAACAACCAGATGTCTACTCATTCCCTACATGGCATAGAACATAGCATTCCTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| 3UTR GCA 72 bp | AGACAGCTTTCTAACCAAGAAAGAGGAAGCAATGGCTaGTGGGATAGCTCCCTCCTTGGTAGACGACATGGC | + |
|
Preference number: 3 (lower is better) Translates to: RQLSNQERGSNG*WDSSLLGRRHG Trigger: GCCATGTCGTCTACCAAGGAGGGAGCTATCCCAGCAGCCATTGCTTCCTCTTTCTTGGTTAGAAAGCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| 3UTR CCA 72 bp | CAGCTTTCTAACCAAGAAAGAGGAAGCAATGGCTGCTaGGATAGCTCCCTCCTTGGTAGACGACATGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QLSNQERGSNGC*DSSLLGRRHGL Trigger: CAAGCCATGTCGTCTACCAAGGAGGGAGCTATCCCAGCAGCCATTGCTTCCTCTTTCTTGGTTAGAAAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| 3UTR TCA 72 bp | CAGGTCCTGGTCAAGTTGGGAGTCTTTAAAAGACAGTaGCAGGCAGAAGGGCATCTGCAAGTTTCTACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QVLVKLGVFKRQ*QAEGHLQVSTP Trigger: GGGAGTAGAAACTTGCAGATGCCCTTCTGCCTGTCACTGTCTTTTAAAGACTCCCAACTTGACCAGGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| 3UTR GCA 72 bp | TCCCAGCAAAGTGAGGACCACACAGTTCACTGCTTTTaGCATAAGTGCTGCATCCTAGCTTACCCACTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SQQSEDHTVHCF*HKCCILAYPLV Trigger: AACAAGTGGGTAAGCTAGGATGCAGCACTTATGGCAAAAGCAGTGAACTGTGTGGTCCTCACTTTGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| 3UTR CCA 72 bp | AAGTTTCTACTCCCAGACCTACCAGGGCAGAGGCTCTaGCTGAACATAAAGGTTCAAGATCCAAACCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KFLLPDLPGQRL*LNIKVQDPNQE Trigger: TTCTTGGTTTGGATCTTGAACCTTTATGTTCAGCCAGAGCCTCTGCCCTGGTAGGTCTGGGAGTAGAAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| 3UTR CCA 72 bp | TGGAACAGCAAAGTCTTCTCTAACCATCTTCTGTTGTaGCACAAATACCTGTGTCACTTGGGGCCTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WNSKVFSNHLLL*HKYLCHLGPVC Trigger: ACACACAGGCCCCAAGTGACACAGGTATTTGTGCCACAACAGAAGATGGTTAGAGAAGACTTTGCTGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAATCAAGATCACTCTAAGGCCCATGAGTTTCCAAAATCCTCAAACAACACTGAGAGTCTCAGGGCCCTaGCATAGTGACATACTCACC | + |
|
Preference number: 3 (lower is better) Translates to: RIKITLRPMSFQNPQTTLRVSGP*HSDILT Trigger: GGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCT...CAGTGTTGTTTGAGGATTTTGGAAACTCATGGGCCTTAGAGTGATCTTGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| 3UTR GCA 72 bp | AGTGAGGACCACACAGTTCACTGCTTTTGCCATAAGTaGTGCATCCTAGCTTACCCACTTGTTAAACTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SEDHTVHCFCHK*CILAYPLVKLL Trigger: GAGAAGTTTAACAAGTGGGTAAGCTAGGATGCAGCACTTATGGCAAAAGCAGTGAACTGTGTGGTCCTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| 3UTR GCA 72 bp | GAGGACCACACAGTTCACTGCTTTTGCCATAAGTGCTaGATCCTAGCTTACCCACTTGTTAAACTTCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: EDHTVHCFCHKC*ILAYPLVKLLN Trigger: ATTGAGAAGTTTAACAAGTGGGTAAGCTAGGATGCAGCACTTATGGCAAAAGCAGTGAACTGTGTGGTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTCTTTTAGCCAAGATGTTTAGAGATGAGGCACATCACACTTCCAAAGACTCTAACCATCTTCTGTaGTGGCACAAATACCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: FILLAKMFRDEAHHTSKDSNHLL*WHKYLC Trigger: ACACAGGTATTTGTGCCACAACAGAAGATGGTTAGA...GTCTTTGGAAGTGTGATGTGCCTCATCTCTAAACATCTTGGCTAAAAGAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGCCCTGGCAGGCGCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTGGCAGAGCGGGCAGTTaGGATGGTAAACAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWALAGAAQEPTTESQGPGRAGS*DGKQGG Trigger: GCCACCCTGTTTACCATCGCAACTGCCCGCTCTGCC...AGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGCGCCTGCCAGGGCCCACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGCCCTGGCAGGCGCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTGGAGTGTCCTGTGGCTaGATCCTGGCTGAGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: GWALAGAAQEPTTESQGPGVSCG*ILAENT Trigger: GGTGTTCTCAGCCAGGATCCAGCCACAGGACACTCC...AGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGCGCCTGCCAGGGCCCACCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCAGAGTCGCCGCCTTCGGGGGCAAAGAAGACTCAGGCCAGAACCCAGAGGGGGTTTGCAGGATGCTaGGGCGGCAGAGCGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAESPPSGAKKTQARTQRGFAGC*GGRAGS Trigger: ACTGCCCGCTCTGCCGCCGCAGCATCCTGCAAACCC...CCTCTGGGTTCTGGCCTGAGTCTTCTTTGCCCCCGAAGGCGGCGACTCTGCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000160985.2 ENSMUST00000216511.2 |
||
| 3UTR CAA 72 bp | GCAGGGAGGGAGTCCTCAGAGGTAGACATTGAGGGTTaGCAGGATGCTGCGGCGGCAGAGCGGGCAGTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGRESSEVDIEG*QDAAAAERAVA Trigger: CGCAACTGCCCGCTCTGCCGCCGCAGCATCCTGCAAACCCTCAATGTCTACCTCTGAGGACTCCCTCCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCAAAGTGTTGATGCTGTCCCGGTGTGTGGAGCGCAGAGGATGAGCAGGAGCTTCCATGGGTCCTaGCCAGCGGCAGGCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQSVDAVPVCGAQRMSRSFHGS*PAAGSS Trigger: GGACGAGCCTGCCGCTGGGCAGGACCCATGGAAGCT...CCTGCTCATCCTCTGCGCTCCACACACCGGGACAGCATCAACACTTTGCCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCAAAGTGTTGATGCTGTCCCGGTGTGTGGAGCGCAGAGGATGAGCAGGGGGTTTGCAGGATGCTaGGGCGGCAGAGCGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRQSVDAVPVCGAQRMSRGFAGC*GGRAGS Trigger: ACTGCCCGCTCTGCCGCCGCAGCATCCTGCAAACCC...CCTGCTCATCCTCTGCGCTCCACACACCGGGACAGCATCAACACTTTGCCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000160985.2 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | GATGCTGCGGCGGCAGAGCGGGCAGTTGCGATGGTAAACAGGGTGGCGCATGAGGGAGTGTCCTGTGGCTaGATCCTGGCTGAGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: DAAAAERAVAMVNRVAHEGVSCG*ILAENT Trigger: GGTGTTCTCAGCCAGGATCCAGCCACAGGACACTCC...CTCATGCGCCACCCTGTTTACCATCGCAACTGCCCGCTCTGCCGCCGCAGCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| 3UTR CAA 72 bp | TGGGTCCTGCCCAGCGGCAGGCTCGTCCTCGTTGAGTaGCTCTCGGCCTCTAGCTGGTGCAGTTCTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: WVLPSGRLVLVE*LSASSWCSSDD Trigger: GTCATCAGAACTGCACCAGCTAGAGGCCGAGAGCAACTCAACGAGGACGAGCCTGCCGCTGGGCAGGACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCGCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACAGCGTCCCCAAGGCCTaGAGTCCCCCGAAGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GRRSTRAHHRVSGPLHSDSVPKA*SPPKVN Trigger: ATTTACCTTCGGGGGACTGCAGGCCTTGGGGACGCT...GTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGCGCCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTGCTGTCGAATCTGTCCTCCACCTAGGCTCCAGACAGGCACATGGATGAGCTTCCATGGGTCCTaGCCAGCGGCAGGCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLCCRICPPPRLQTGTWMSFHGS*PAAGSS Trigger: GGACGAGCCTGCCGCTGGGCAGGACCCATGGAAGCT...CATCCATGTGCCTGTCTGGAGCCTAGGTGGAGGACAGATTCGACAGCAGAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCAAAGTGTTGATGCTGTCCCGGTGTGTGGAGCGCAGAGGATGAGCAGGCTCCTCAGAGCTCCGTaGGAGGCCAAGTGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRQSVDAVPVCGAQRMSRLLRAP*EAKCPS Trigger: ACTGGGGCACTTGGCCTCCCACGGAGCTCTGAGGAG...CCTGCTCATCCTCTGCGCTCCACACACCGGGACAGCATCAACACTTTGCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCAGAGTCGCCGCCTTCGGGGGCAAAGAAGACTCAGGCCAGAACCCAGAGGGGAGTGTCCTGTGGCTaGATCCTGGCTGAGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LAESPPSGAKKTQARTQRGVSCG*ILAENT Trigger: GGTGTTCTCAGCCAGGATCCAGCCACAGGACACTCC...CCTCTGGGTTCTGGCCTGAGTCTTCTTTGCCCCCGAAGGCGGCGACTCTGCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGGCGCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTGCATAGTGCATATGTCACAGGCCTaGCGCAGCAAAGCATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAGAAQEPTTESQGPCIVHMSQA*RSKAWP Trigger: TGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATG...CACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGCGCCTGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGGCGCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTGCATAGTGCTCTCGGCCTCTAGCTaGTGCAGTTCTGATGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAGAAQEPTTESQGPCIVLSASS*CSSDDL Trigger: GAGGTCATCAGAACTGCACCAGCTAGAGGCCGAGAG...CACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGCGCCTGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR GCA 90 bp | CCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCATGCGGCTCCAGACTCTaGGCCAAGCCTCCAGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: PTTESQGPCIVTYSPPSACGSRL*AKPPDL Trigger: TAGGTCTGGAGGCTTGGCGCAGAGTCTGGAGCCGCA...TGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGCACCCCTGTACTCAGGGATAAACTCCTGACTCCAGGTCCTGGTCAAGTTAGCTTCCATGGGTCCTaGCCAGCGGCAGGCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCTPVLRDKLLTPGPGQVSFHGS*PAAGSS Trigger: GGACGAGCCTGCCGCTGGGCAGGACCCATGGAAGCT...AACTTGACCAGGACCTGGAGTCAGGAGTTTATCCCTGAGTACAGGGGTGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGCAATGGCTGCTGGGATAGCTCCCTCCTTGGTAGACGACATGGCTTGCGGCAGAGCGGGCAGTTaGGATGGTAAACAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EEAMAAGIAPSLVDDMACGRAGS*DGKQGG Trigger: GCCACCCTGTTTACCATCGCAACTGCCCGCTCTGCC...GCAAGCCATGTCGTCTACCAAGGAGGGAGCTATCCCAGCAGCCATTGCTTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGTCCTGGATGGGTTTGCAGGATGCTaGGGCGGCAGAGCGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSHPDWSLPEYSKLHVLDGFAGC*GGRAGS Trigger: ACTGCCCGCTCTGCCGCCGCAGCATCCTGCAAACCC...ATCCAGGACGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000160985.2 ENSMUST00000216511.2 |
||
| CDS-3UTR GCA 90 bp | CCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCATGGCCAGTTGTAGGCTaGGGCACCAGGCTCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTTESQGPCIVTYSPPSAWPVVG*GTRLMA Trigger: TGCCATGAGCCTGGTGCCGCAGCCTACAACTGGCCA...TGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGTCCTGGGCACTGCTGGAGATGTaGGCGAGGAAAGCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LCPTQTGVFQSIPSYTSWALLEM*ARKAAT Trigger: GGTGGCTGCTTTCCTCGCTCACATCTCCAGCAGTGC...CCAGGACGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCATGCGGCTCCAGACTCTaGGCCAAGCCTCCAGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: AAQEPTTESQGPCIVTYSCGSRL*AKPPDL Trigger: TAGGTCTGGAGGCTTGGCGCAGAGTCTGGAGCCGCA...TGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCATCTCAGGGGGCAGAGCGGGCAGTTaGGATGGTAAACAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVSGPLHSDILTTLSISGGRAGS*DGKQGG Trigger: GCCACCCTGTTTACCATCGCAACTGCCCGCTCTGCC...CCCTGAGATGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGCACAAATACCTGTGTCACTTGGGGCCTGTGTGTGCTCCTGGTTGGCCAAGGCAGAGCGGGCAGTTaGGATGGTAAACAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CGTNTCVTWGLCVLLVGQGRAGS*DGKQGG Trigger: GCCACCCTGTTTACCATCGCAACTGCCCGCTCTGCC...TTGGCCAACCAGGAGCACACACAGGCCCCAAGTGACACAGGTATTTGTGCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
||
| CDS-3UTR GCA 90 bp | GACAGCTTTCTAACCAAGAAAGAGGAAGCAATGGCTGCTGGGATAGCTCCCTCCGGGTTTGCAGGATGCTaGGGCGGCAGAGCGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSFLTKKEEAMAAGIAPSGFAGC*GGRAGS Trigger: ACTGCCCGCTCTGCCGCCGCAGCATCCTGCAAACCC...GGAGGGAGCTATCCCAGCAGCCATTGCTTCCTCTTTCTTGGTTAGAAAGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR CCA 90 bp | GCTTGGCAGAGTCGCCGCCTTCGGGGGCAAAGAAGACTCAGGCCAGAACCCAGAGCAAAGCATGGCCATTaGAGACCATGTTCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: AWQSRRLRGQRRLRPEPRAKHGH*RPCSGC Trigger: GCATCCTGAACATGGTCTCCAATGGCCATGCTTTGC...TCTGGGTTCTGGCCTGAGTCTTCTTTGCCCCCGAAGGCGGCGACTCTGCCAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
||
| CDS-3UTR CCA 90 bp | GCTTGGCAGAGTCGCCGCCTTCGGGGGCAAAGAAGACTCAGGCCAGAACCCAGAACCAATCCAGTGAGATaGAAAACCACACAGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AWQSRRLRGQRRLRPEPRTNPVR*KTTQLA Trigger: GGCCAGCTGTGTGGTTTTCCATCTCACTGGATTGGT...TCTGGGTTCTGGCCTGAGTCTTCTTTGCCCCCGAAGGCGGCGACTCTGCCAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | TCACTTGGGGCCTGTGTGTGCTCCTGGTTGGCCAACCTCACGAAGGAAGACAGCCTCTCGGCCTCTAGCTaGTGCAGTTCTGATGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLGACVCSWLANLTKEDSLSASS*CSSDDL Trigger: GAGGTCATCAGAACTGCACCAGCTAGAGGCCGAGAG...GCTGTCTTCCTTCGTGAGGTTGGCCAACCAGGAGCACACACAGGCCCCAAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGTCCTGGATGCACTGCTGGAGATGTaGGCGAGGAAAGCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSHPDWSLPEYSKLHVLDALLEM*ARKAAT Trigger: GGTGGCTGCTTTCCTCGCTCACATCTCCAGCAGTGC...ATCCAGGACGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGTCCTGGAGCGTCCCCAAGGCCTaGAGTCCCCCGAAGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCPTQTGVFQSIPSYTSWSVPKA*SPPKVN Trigger: ATTTACCTTCGGGGGACTGCAGGCCTTGGGGACGCT...CCAGGACGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGACAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
||
| CDS-3UTR CCA 90 bp | ATAGCTCCCTCCTTGGTAGACGACATGGCTTGCCTCAGGACCTTAGAGACGATTCTCCTCAGAGCTCCGTaGGAGGCCAAGTGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IAPSLVDDMACLRTLETILLRAP*EAKCPS Trigger: ACTGGGGCACTTGGCCTCCCACGGAGCTCTGAGGAG...AATCGTCTCTAAGGTCCTGAGGCAAGCCATGTCGTCTACCAAGGAGGGAGCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR CCA 90 bp | CCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCACATATGTCACAGGCCTaGCGCAGCAAAGCATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTTESQGPCIVTYSPPSAHMSQA*RSKAWP Trigger: TGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATG...TGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAAGACCCCAGCAGCATCTTCCAGACAGAACCTGCCAAGGGCACAGTGTGGAGTGTCCTGTGGCTaGATCCTGGCTGAGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LPKTPAASSRQNLPRAQCGVSCG*ILAENT Trigger: GGTGTTCTCAGCCAGGATCCAGCCACAGGACACTCC...ACACTGTGCCCTTGGCAGGTTCTGTCTGGAAGATGCTGCTGGGGTCTTTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| 3UTR CAA 72 bp | CGCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTaGCATAGTGACATACTCACCACCCTCAGCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSTRAHHRVSGP*HSDILTTLSIS Trigger: TGAGATGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCATCTCAGGGAAACAGGGTGGCGCATaGGGATCTCAGTGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVSGPLHSDILTTLSISGKQGGA*GSQCKP Trigger: AGGCTTGCACTGAGATCCTCATGCGCCACCCTGTTT...CCCTGAGATGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCAAAACAGGGTGGCGCATaGGGATCTCAGTGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAQEPTTESQGPCIVTYSKQGGA*GSQCKP Trigger: AGGCTTGCACTGAGATCCTCATGCGCCACCCTGTTT...TGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGTCCTGGATAGCGTCCCCAAGGCCTaGAGTCCCCCGAAGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSHPDWSLPEYSKLHVLDSVPKA*SPPKVN Trigger: ATTTACCTTCGGGGGACTGCAGGCCTTGGGGACGCT...ATCCAGGACGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
||
| CDS-3UTR GCA 90 bp | CCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCAAATGGCCATAGCCACTaGACTGCTGGAGATGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTTESQGPCIVTYSPPSANGHSH*TAGDVS Trigger: GCTCACATCTCCAGCAGTGCAGTGGCTATGGCCATT...TGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | CTAAATGGAGCTATGACCCCTGAGGCCCAGCCCCTCGTTTGGACCCAAGTGAAACATATGTCACAGGCCTaGCGCAGCAAAGCATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNGAMTPEAQPLVWTQVKHMSQA*RSKAWP Trigger: TGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATG...TTTCACTTGGGTCCAAACGAGGGGCTGGGCCTCAGGGGTCATAGCTCCATTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCAAAGTGTTGATGCTGTCCCGGTGTGTGGAGCGCAGAGGATGAGCAGGAGCACCGTTTTGCTCTaGTCCTGGCAGATAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: QRQSVDAVPVCGAQRMSRSTVLL*SWQITH Trigger: GTGTGTTATCTGCCAGGACCAGAGCAAAACGGTGCT...CCTGCTCATCCTCTGCGCTCCACACACCGGGACAGCATCAACACTTTGCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000160985.2 ENSMUST00000216511.2 |
||
| 3UTR CAA 72 bp | CTGGTCCTGGCAGATAACACACTTCTTCCGCTCTTCTaGCTCCTTCAACAGCTTCCATGGGTCCTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLADNTLLPLF*LLQQLPWVLPS Trigger: GCTGGGCAGGACCCATGGAAGCTGTTGAAGGAGCAAGAAGAGCGGAAGAAGTGTGTTATCTGCCAGGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCGGCAGGGCAGAAGCAGCACCGTTTTGCTCTGGTCCTGGCAGATAACACAACACGAGCAGGAAGTTaGGATCCAACATCAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPAGQKQHRFALVLADNTTRAGS*DPTSRS Trigger: TGACCTTGATGTTGGATCTCAACTTCCTGCTCGTGT...TGTGTTATCTGCCAGGACCAGAGCAAAACGGTGCTGCTTCTGCCCTGCCGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGTCCTGGTGGCGCAGCAAAGCATaGCCATTGGAGACCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCPTQTGVFQSIPSYTSWWRSKA*PLETMF Trigger: GAACATGGTCTCCAATGGCCATGCTTTGCTGCGCCA...CCAGGACGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCGCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACCCTCAGGGTTTGTTCTaGGTGCAACACAATCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GRRSTRAHHRVSGPLHSDPQGLF*VQHNQN Trigger: ATTTTGATTGTGTTGCACCCAGAACAAACCCTGAGG...GTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGCGCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | CCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCAAGCACCGTTTTGCTCTaGTCCTGGCAGATAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: PTTESQGPCIVTYSPPSASTVLL*SWQITH Trigger: GTGTGTTATCTGCCAGGACCAGAGCAAAACGGTGCT...TGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| 3UTR CAA 72 bp | AAAGAGGAAGCAATGGCTGCTGGGATAGCTCCCTCCTaGGTAGACGACATGGCTTGCCTCAGGACCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KEEAMAAGIAPS*VDDMACLRTLE Trigger: CTCTAAGGTCCTGAGGCAAGCCATGTCGTCTACCAAGGAGGGAGCTATCCCAGCAGCCATTGCTTCCTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR TCA 90 bp | CCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCAACACGAGCAGGAAGTTaGGATCCAACATCAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTTESQGPCIVTYSPPSATRAGS*DPTSRS Trigger: TGACCTTGATGTTGGATCTCAACTTCCTGCTCGTGT...TGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 |
||
| CDS-3UTR TCA 90 bp | CCCAAAGCCAGGTGTAGCTGCACCCCTGTACTCAGGGATAAACTCCTGACTCCAAGGGAGAAGAAGTTCTaGGTGCTGATGAGGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PKARCSCTPVLRDKLLTPREKKF*VLMRQM Trigger: CATCTGCCTCATCAGCACTCAGAACTTCTTCTCCCT...TGGAGTCAGGAGTTTATCCCTGAGTACAGGGGTGCAGCTACACCTGGCTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGCACAAATACCTGTGTCACTTGGGGCCTGTGTGTGCTCCTGGTTGGCCAAAGGGAGAAGAAGTTCTaGGTGCTGATGAGGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CGTNTCVTWGLCVLLVGQREKKF*VLMRQM Trigger: CATCTGCCTCATCAGCACTCAGAACTTCTTCTCCCT...TTGGCCAACCAGGAGCACACACAGGCCCCAAGTGACACAGGTATTTGTGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR TCA 90 bp | CTAAATGGAGCTATGACCCCTGAGGCCCAGCCCCTCGTTTGGACCCAAGTGAAAGCAACACCAATCCAGTaGGATGGAAAACCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNGAMTPEAQPLVWTQVKATPIQ*DGKPHS Trigger: GCTGTGTGGTTTTCCATCTCACTGGATTGGTGTTGC...TTTCACTTGGGTCCAAACGAGGGGCTGGGCCTCAGGGGTCATAGCTCCATTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR TCA 90 bp | CCACCCTCAGCATCTCAGGGCCCCACACAGGATTTAGAGAAAGTGTTACTCTGTAAACAGGGTGGCGCATaGGGATCTCAGTGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPSASQGPTQDLEKVLLCKQGGA*GSQCKP Trigger: AGGCTTGCACTGAGATCCTCATGCGCCACCCTGTTT...ACAGAGTAACACTTTCTCTAAATCCTGTGTGGGGCCCTGAGATGCTGAGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000160985.2 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGCAATGGCTGCTGGGATAGCTCCCTCCTTGGTAGACGACATGGCTTGCGGTAAGTACCGTGTGTaGCAGATTGTAGATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EEAMAAGIAPSLVDDMACGKYRV*QIVDEG Trigger: GCCTTCATCTACAATCTGCCACACACGGTACTTACC...GCAAGCCATGTCGTCTACCAAGGAGGGAGCTATCCCAGCAGCCATTGCTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR CCA 90 bp | TCTGACCCATCACCCTCAGCATCTCAGGGCCCCACACAGGATTTAGAGAAAGTGTGGCGCAGCAAAGCATaGCCATTGGAGACCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDPSPSASQGPTQDLEKVWRSKA*PLETMF Trigger: GAACATGGTCTCCAATGGCCATGCTTTGCTGCGCCA...CACTTTCTCTAAATCCTGTGTGGGGCCCTGAGATGCTGAGGGTGATGGGTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR CCA 90 bp | ATAGCTCCCTCCTTGGTAGACGACATGGCTTGCCTCAGGACCTTAGAGACGATTCATATGTCACAGGCCTaGCGCAGCAAAGCATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IAPSLVDDMACLRTLETIHMSQA*RSKAWP Trigger: TGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATG...AATCGTCTCTAAGGTCCTGAGGCAAGCCATGTCGTCTACCAAGGAGGGAGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAAGACCCCAGCAGCATCTTCCAGACAGAACCTGCCAAGGGCACAGTGTACCAATCCAGTGAGATaGAAAACCACACAGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPKTPAASSRQNLPRAQCTNPVR*KTTQLA Trigger: GGCCAGCTGTGTGGTTTTCCATCTCACTGGATTGGT...ACACTGTGCCCTTGGCAGGTTCTGTCTGGAAGATGCTGCTGGGGTCTTTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR CCA 90 bp | CCACCCTCAGCATCTCAGGGCCCCACACAGGATTTAGAGAAAGTGTTACTCTGTCTCTCGGCCTCTAGCTaGTGCAGTTCTGATGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSASQGPTQDLEKVLLCLSASS*CSSDDL Trigger: GAGGTCATCAGAACTGCACCAGCTAGAGGCCGAGAG...ACAGAGTAACACTTTCTCTAAATCCTGTGTGGGGCCCTGAGATGCTGAGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR TCA 90 bp | CACACAGTTCACTGCTTTTGCCATAAGTGCTGCATCCTAGCTTACCCACTTGTTGCACTGCTGGAGATGTaGGCGAGGAAAGCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HTVHCFCHKCCILAYPLVALLEM*ARKAAT Trigger: GGTGGCTGCTTTCCTCGCTCACATCTCCAGCAGTGC...AACAAGTGGGTAAGCTAGGATGCAGCACTTATGGCAAAAGCAGTGAACTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR GCA 90 bp | ATAGCTCCCTCCTTGGTAGACGACATGGCTTGCCTCAGGACCTTAGAGACGATTAATGGCCATAGCCACTaGACTGCTGGAGATGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IAPSLVDDMACLRTLETINGHSH*TAGDVS Trigger: GCTCACATCTCCAGCAGTGCAGTGGCTATGGCCATT...AATCGTCTCTAAGGTCCTGAGGCAAGCCATGTCGTCTACCAAGGAGGGAGCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR CCA 90 bp | AGGCACATCACACTTCCAAAGACCCCAGCAGCATCTTCCAGACAGAACCTGCCAGCAAAGCATGGCCATTaGAGACCATGTTCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RHITLPKTPAASSRQNLPAKHGH*RPCSGC Trigger: GCATCCTGAACATGGTCTCCAATGGCCATGCTTTGC...TGGCAGGTTCTGTCTGGAAGATGCTGCTGGGGTCTTTGGAAGTGTGATGTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR CCA 90 bp | CCACCCTCAGCATCTCAGGGCCCCACACAGGATTTAGAGAAAGTGTTACTCTGTTGGCGCAGCAAAGCATaGCCATTGGAGACCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSASQGPTQDLEKVLLCWRSKA*PLETMF Trigger: GAACATGGTCTCCAATGGCCATGCTTTGCTGCGCCA...ACAGAGTAACACTTTCTCTAAATCCTGTGTGGGGCCCTGAGATGCTGAGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGCACCCCTGTACTCAGGGATAAACTCCTGACTCCAGGTCCTGGTCAAGTTACCAATCCAGTGAGATaGAAAACCACACAGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCTPVLRDKLLTPGPGQVTNPVR*KTTQLA Trigger: GGCCAGCTGTGTGGTTTTCCATCTCACTGGATTGGT...AACTTGACCAGGACCTGGAGTCAGGAGTTTATCCCTGAGTACAGGGGTGCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAAGCCAGGTGTAGCTGCACCCCTGTACTCAGGGATAAACTCCTGACTCCAGTTTTGCTCTGGTCCTaGCAGATAACACACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKARCSCTPVLRDKLLTPVLLWS*QITHFF Trigger: GAAGAAGTGTGTTATCTGCCAGGACCAGAGCAAAAC...TGGAGTCAGGAGTTTATCCCTGAGTACAGGGGTGCAGCTACACCTGGCTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
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| CDS-3UTR CCA 90 bp | GTGTTACTCTGTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGAGCACCGTTTTGCTCTaGTCCTGGCAGATAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: VLLCPTQTGVFQSIPSYTSTVLL*SWQITH Trigger: GTGTGTTATCTGCCAGGACCAGAGCAAAACGGTGCT...CGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGACAGAGTAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000160985.2 ENSMUST00000216511.2 |
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| CDS-3UTR TCA 90 bp | AAGAAAGAGGAAGCAATGGCTGCTGGGATAGCTCCCTCCTTGGTAGACGACATGACACGAGCAGGAAGTTaGGATCCAACATCAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKEEAMAAGIAPSLVDDMTRAGS*DPTSRS Trigger: TGACCTTGATGTTGGATCTCAACTTCCTGCTCGTGT...CATGTCGTCTACCAAGGAGGGAGCTATCCCAGCAGCCATTGCTTCCTCTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR TCA 90 bp | AAGATGTTTAGAGATGAGGCACATCACACTTCCAAAGACCCCAGCAGCATCTTCAAACAGGGTGGCGCATaGGGATCTCAGTGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KMFRDEAHHTSKDPSSIFKQGGA*GSQCKP Trigger: AGGCTTGCACTGAGATCCTCATGCGCCACCCTGTTT...GAAGATGCTGCTGGGGTCTTTGGAAGTGTGATGTGCCTCATCTCTAAACATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
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| CDS-3UTR CCA 90 bp | GTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGTCCTGGATATGGTAAGTACCGTGTGTaGCAGATTGTAGATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPPRLESSRVFQATRPGYGKYRV*QIVDEG Trigger: GCCTTCATCTACAATCTGCCACACACGGTACTTACC...ATATCCAGGACGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGGTCCTGGCAGATAACACACTTCTTCCGCTCTTCTTGCTCCTTCAACAGGGTAAGTACCGTGTGTaGCAGATTGTAGATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALVLADNTLLPLFLLLQQGKYRV*QIVDEG Trigger: GCCTTCATCTACAATCTGCCACACACGGTACTTACC...CTGTTGAAGGAGCAAGAAGAGCGGAAGAAGTGTGTTATCTGCCAGGACCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTCTTTTAGCCAAGATGTTTAGAGATGAGGCACATCACACTTCCAAAGACTGCGGCTCCAGACTCTaGGCCAAGCCTCCAGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: FILLAKMFRDEAHHTSKDCGSRL*AKPPDL Trigger: TAGGTCTGGAGGCTTGGCGCAGAGTCTGGAGCCGCA...GTCTTTGGAAGTGTGATGTGCCTCATCTCTAAACATCTTGGCTAAAAGAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| 3UTR CAA 72 bp | CATTGGAACAGCAAAGTCTTCTCTAACCATCTTCTGTaGTGGCACAAATACCTGTGTCACTTGGGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HWNSKVFSNHLL*WHKYLCHLGPV Trigger: CACAGGCCCCAAGTGACACAGGTATTTGTGCCACAACAGAAGATGGTTAGAGAAGACTTTGCTGTTCCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGTAGCACTGTAGGCATTGGAACAGCAAAGTCTTCTCTAACCATCTTCTGTGTTTTGCTCTGGTCCTaGCAGATAACACACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCSTVGIGTAKSSLTIFCVLLWS*QITHFF Trigger: GAAGAAGTGTGTTATCTGCCAGGACCAGAGCAAAAC...ACAGAAGATGGTTAGAGAAGACTTTGCTGTTCCAATGCCTACAGTGCTACAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
||
| CDS-3UTR TCA 90 bp | AAGAATCAAGATCACTCTAAGGCCCATGAGTTTCCAAAATCCTCAAACAACACTGCAACACCAATCCAGTaGGATGGAAAACCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNQDHSKAHEFPKSSNNTATPIQ*DGKPHS Trigger: GCTGTGTGGTTTTCCATCTCACTGGATTGGTGTTGC...AGTGTTGTTTGAGGATTTTGGAAACTCATGGGCCTTAGAGTGATCTTGATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
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| CDS-3UTR CCA 90 bp | AAGAATCAAGATCACTCTAAGGCCCATGAGTTTCCAAAATCCTCAAACAACACTGCAAAGCATGGCCATTaGAGACCATGTTCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: KNQDHSKAHEFPKSSNNTAKHGH*RPCSGC Trigger: GCATCCTGAACATGGTCTCCAATGGCCATGCTTTGC...AGTGTTGTTTGAGGATTTTGGAAACTCATGGGCCTTAGAGTGATCTTGATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 |
||
| CDS-3UTR CCA 90 bp | CATTGGAACAGCAAAGTCTTCTCTAACCATCTTCTGTTGTGGCACAAATACCTGGTTTTGCTCTGGTCCTaGCAGATAACACACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HWNSKVFSNHLLLWHKYLVLLWS*QITHFF Trigger: GAAGAAGTGTGTTATCTGCCAGGACCAGAGCAAAAC...CAGGTATTTGTGCCACAACAGAAGATGGTTAGAGAAGACTTTGCTGTTCCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
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| 3UTR CAA 72 bp | GATGCCATATGCCACATCTGGATTCGCAGGTTGCGTTaGTCCACGTGTTTTATTCTTTTAGCCAAGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DAICHIWIRRLR*STCFILLAKMF Trigger: AAACATCTTGGCTAAAAGAATAAAACACGTGGACAAACGCAACCTGCGAATCCAGATGTGGCATATGGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| 3UTR CAA 72 bp | ATTTCAGATGCCATATGCCACATCTGGATTCGCAGGTaGCGTTTGTCCACGTGTTTTATTCTTTTAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISDAICHIWIRR*RLSTCFILLAK Trigger: CTTGGCTAAAAGAATAAAACACGTGGACAAACGCAACCTGCGAATCCAGATGTGGCATATGGCATCTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCATAAGTGCTGCATCCTAGCTTACCCACTTGTTAAACTTCTCAATTATGCAACACCAATCCAGTaGGATGGAAAACCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCHKCCILAYPLVKLLNYATPIQ*DGKPHS Trigger: GCTGTGTGGTTTTCCATCTCACTGGATTGGTGTTGC...ATAATTGAGAAGTTTAACAAGTGGGTAAGCTAGGATGCAGCACTTATGGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| CDS-3UTR CCA 90 bp | AGAATCAAGATCACTCTAAGGCCCATGAGTTTCCAAAATCCTCAAACAACACTGGTTTTGCTCTGGTCCTaGCAGATAACACACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RIKITLRPMSFQNPQTTLVLLWS*QITHFF Trigger: GAAGAAGTGTGTTATCTGCCAGGACCAGAGCAAAAC...CAGTGTTGTTTGAGGATTTTGGAAACTCATGGGCCTTAGAGTGATCTTGATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
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| CDS-3UTR CCA 90 bp | AGAATCAAGATCACTCTAAGGCCCATGAGTTTCCAAAATCCTCAAACAACACTGCCTCAGGGTTTGTTCTaGGTGCAACACAATCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RIKITLRPMSFQNPQTTLPQGLF*VQHNQN Trigger: ATTTTGATTGTGTTGCACCCAGAACAAACCCTGAGG...CAGTGTTGTTTGAGGATTTTGGAAACTCATGGGCCTTAGAGTGATCTTGATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCATAAGTGCTGCATCCTAGCTTACCCACTTGTTAAACTTCTCAATTATCCTCAGGGTTTGTTCTaGGTGCAACACAATCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FCHKCCILAYPLVKLLNYPQGLF*VQHNQN Trigger: ATTTTGATTGTGTTGCACCCAGAACAAACCCTGAGG...ATAATTGAGAAGTTTAACAAGTGGGTAAGCTAGGATGCAGCACTTATGGCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| CDS GCA 90 bp | CCCGATTTGGCCAGCTGGCCAGTTGTAGGCTGCGGCTCCAGACTCTaGGCCAAGCCTCCAGACCTAGTGGAAGGCGAGTCAGCCGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: PDLASWPVVGCGSRL*AKPPDLVEGESAVR Trigger: TCGTACGGCTGACTCGCCTTCCACTAGGTCTGGAGGCTTGGCGCAGAGTCTGGAGCCGCAGCCTACAACTGGCCAGCTGGCCAAATCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS GCA 90 bp | AGGCCTGGCGCAGCAAAGCATGGCCATTGGAGACCATGTTCAGGATaGCCCGATTCAGGAATTCCCGGCTCCTCAGAGCTCCGTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPGAAKHGHWRPCSG*PDSGIPGSSELRGR Trigger: CCTCCCACGGAGCTCTGAGGAGCCGGGAATTCCTGAATCGGGGCATCCTGAACATGGTCTCCAATGGCCATGCTTTGCTGCGCCAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAAAGTGTTGATGCTGTCCCGGTGTGTGGAGCGCAGAGGATGAGCAGGCTCGTCCTCGTTGAGTaGCTCTCGGCCTCTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QRQSVDAVPVCGAQRMSRLVLVE*LSASSW Trigger: CCAGCTAGAGGCCGAGAGCAACTCAACGAGGACGAG...CCTGCTCATCCTCTGCGCTCCACACACCGGGACAGCATCAACACTTTGCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS TCA 90 bp | GGGGTCCACAGGAGAATGGCCATAGCCACTGCACTGCTGGAGATGTaGGCGAGGAAAGCAGCCACCACGTCTGTCATCCTCCAAAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVHRRMAIATALLEM*ARKAATTSVILQRG Trigger: GCCTCTTTGGAGGATGACAGACGTGGTGGCTGCTTTCCTCGCTCACATCTCCAGCAGTGCAGTGGCTATGGCCATTCTCCTGTGGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS CCA 90 bp | AAAATCACTGCCAGCACGCAAGCCAGCAACACCAATCCAGTGAGATaGAAAACCACACAGCTGGCCAGCAGGCGGGCGGCTGAGGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KITASTQASNTNPVR*KTTQLASRRAAEAN Trigger: GTTGGCCTCAGCCGCCCGCCTGCTGGCCAGCTGTGTGGTTTTCCATCTCACTGGATTGGTGTTGCTGGCTTGCGTGCTGGCAGTGATTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS CCA 90 bp | AAGGCGAGTCAGCCGTACGATATCCTCCCAAAGCCGGTGGTAAGATaGGCGGGCATGAAGCTGACTGAGAGCTTGAGTGGCCAGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KASQPYDILPKPVVR*AGMKLTESLSGQPQ Trigger: CTGAGGCTGGCCACTCAAGCTCTCAGTCAGCTTCATGCCCGCCCATCTTACCACCGGCTTTGGGAGGATATCGTACGGCTGACTCGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS CCA 90 bp | GGCTGCGGCACCAGGCTCATGGCAATAGCACATATGTCACAGGCCTaGCGCAGCAAAGCATGGCCATTGGAGACCATGTTCAGGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GCGTRLMAIAHMSQA*RSKAWPLETMFRMP Trigger: GGGCATCCTGAACATGGTCTCCAATGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATGTGCTATTGCCATGAGCCTGGTGCCGCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| CDS-3UTR CAA 90 bp | CTGGCAGGCGCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTGCATAGTGAGAAGCAGCACCGTTTaGCTCTGGTCCTGGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: LAGAAQEPTTESQGPCIVRSSTV*LWSWQI Trigger: TATCTGCCAGGACCAGAGCAAAACGGTGCTGCTTCT...CACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGCGCCTGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
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| CDS-3UTR CAA 90 bp | GCTTGGCAGAGTCGCCGCCTTCGGGGGCAAAGAAGACTCAGGCCAGAACCCAGAAGCAAAGCATGGCCATaGGAGACCATGTTCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AWQSRRLRGQRRLRPEPRSKAWP*ETMFRM Trigger: CATCCTGAACATGGTCTCCAATGGCCATGCTTTGCT...TCTGGGTTCTGGCCTGAGTCTTCTTTGCCCCCGAAGGCGGCGACTCTGCCAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAAAGTGTTGATGCTGTCCCGGTGTGTGGAGCGCAGAGGATGAGCAGGGGCCAGCCTCAGGGTTaGTTCTGGGTGCAACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: QRQSVDAVPVCGAQRMSRGQPQG*FWVQHN Trigger: ATTGTGTTGCACCCAGAACAAACCCTGAGGCTGGCC...CCTGCTCATCCTCTGCGCTCCACACACCGGGACAGCATCAACACTTTGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS TCA 90 bp | TATCCTCCCAAAGCCGGTGGTAAGATGGGCGGGCATGAAGCTGACTaGGAGCTTGAGTGGCCAGCCTCAGGGTTTGTTCTGGGTGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: YPPKAGGKMGGHEAD*ELEWPASGFVLGAT Trigger: TGTTGCACCCAGAACAAACCCTGAGGCTGGCCACTCAAGCTCTCAGTCAGCTTCATGCCCGCCCATCTTACCACCGGCTTTGGGAGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS-3UTR CAA 90 bp | AATACCTGTGTCACTTGGGGCCTGTGTGTGCTCCTGGTTGGCCAACCTCACGAAAAGCTGACTGAGAGCTaGAGTGGCCAGCCTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NTCVTWGLCVLLVGQPHEKLTES*SGQPQG Trigger: ACCCTGAGGCTGGCCACTCAAGCTCTCAGTCAGCTT...TTCGTGAGGTTGGCCAACCAGGAGCACACACAGGCCCCAAGTGACACAGGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| CDS-3UTR CAA 90 bp | GGCAGGCGCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACCTGATGAGGCAGATGTaGACTAGACTGTTGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: GRRSTRAHHRVSGPLHSDLMRQM*TRLLIT Trigger: TGTGATCAACAGTCTAGTCAACATCTGCCTCATCAG...GTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGCGCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
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| CDS-3UTR CAA 90 bp | TTGGCAGAGTCGCCGCCTTCGGGGGCAAAGAAGACTCAGGCCAGAACCCAGAGGCTGATGAGGCAGATGTaGACTAGACTGTTGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: LAESPPSGAKKTQARTQRLMRQM*TRLLIT Trigger: TGTGATCAACAGTCTAGTCAACATCTGCCTCATCAG...CCTCTGGGTTCTGGCCTGAGTCTTCTTTGCCCCCGAAGGCGGCGACTCTGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS-3UTR CAA 90 bp | AGAGTCTCAGGGCCCTTGCATAGTGACATACTCACCACCCTCAGCATCTCAGGGGGCCAGCCTCAGGGTTaGTTCTGGGTGCAACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: RVSGPLHSDILTTLSISGGQPQG*FWVQHN Trigger: ATTGTGTTGCACCCAGAACAAACCCTGAGGCTGGCC...CCCTGAGATGCTGAGGGTGGTGAGTATGTCACTATGCAAGGGCCCTGAGACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
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| CDS-3UTR CAA 90 bp | GTGTTACTCTGTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGCTCGTCCTCGTTGAGTaGCTCTCGGCCTCTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLLCPTQTGVFQSIPSYTLVLVE*LSASSW Trigger: CCAGCTAGAGGCCGAGAGCAACTCAACGAGGACGAG...CGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGACAGAGTAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS-3UTR CAA 90 bp | AGCTCCCTCCTTGGTAGACGACATGGCTTGCCTCAGGACCTTAGAGACGATTTTCTCGTCCTCGTTGAGTaGCTCTCGGCCTCTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLLGRRHGLPQDLRDDFLVLVE*LSASSW Trigger: CCAGCTAGAGGCCGAGAGCAACTCAACGAGGACGAG...AAAATCGTCTCTAAGGTCCTGAGGCAAGCCATGTCGTCTACCAAGGAGGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAAAGTGTTGATGCTGTCCCGGTGTGTGGAGCGCAGAGGATGAGCAGGCTTCTTCCGCTCTTCTaGCTCCTTCAACAGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QRQSVDAVPVCGAQRMSRLLPLF*LLQQLP Trigger: TGGAAGCTGTTGAAGGAGCAAGAAGAGCGGAAGAAG...CCTGCTCATCCTCTGCGCTCCACACACCGGGACAGCATCAACACTTTGCCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS CCA 90 bp | CAGGAATCCTCGACCCAAGTGCAGAAGACTGGTAAGTACCGTGTGTaGCAGATTGTAGATGAAGGCCAAAAGCCAGGCCAGGGTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QESSTQVQKTGKYRV*QIVDEGQKPGQGSQ Trigger: CTGGCTACCCTGGCCTGGCTTTTGGCCTTCATCTACAATCTGCCACACACGGTACTTACCAGTCTTCTGCACTTGGGTCGAGGATTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS-3UTR CAA 90 bp | GTGTTACTCTGTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGAAGCTGACTGAGAGCTaGAGTGGCCAGCCTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLLCPTQTGVFQSIPSYTKLTES*SGQPQG Trigger: ACCCTGAGGCTGGCCACTCAAGCTCTCAGTCAGCTT...CGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGACAGAGTAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCACAAGAGCCCACCACAGAGTCTCAGGGCCCTTGCATAGTGACATACTCAAGAAGCAGCACCGTTTaGCTCTGGTCCTGGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: AAQEPTTESQGPCIVTYSRSSTV*LWSWQI Trigger: TATCTGCCAGGACCAGAGCAAAACGGTGCTGCTTCT...TGAGTATGTCACTATGCAAGGGCCCTGAGACTCTGTGGTGGGCTCTTGTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS CCA 90 bp | CTCATGGCAATAGCACATATGTCACAGGCCTGGCGCAGCAAAGCATaGCCATTGGAGACCATGTTCAGGATGCCCCGATTCAGGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LMAIAHMSQAWRSKA*PLETMFRMPRFRNS Trigger: GGAATTCCTGAATCGGGGCATCCTGAACATGGTCTCCAATGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATGTGCTATTGCCATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
||
| CDS-3UTR CAA 90 bp | CCACCCTCAGCATCTCAGGGCCCCACACAGGATTTAGAGAAAGTGTTACTCTGTGGCCAGCCTCAGGGTTaGTTCTGGGTGCAACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: PPSASQGPTQDLEKVLLCGQPQG*FWVQHN Trigger: ATTGTGTTGCACCCAGAACAAACCCTGAGGCTGGCC...ACAGAGTAACACTTTCTCTAAATCCTGTGTGGGGCCCTGAGATGCTGAGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000216511.2 |
||
| CDS GCA 90 bp | GGCCAGCCTCAGGGTTTGTTCTGGGTGCAACACAATCAAAATCACTaGCAGCACGCAAGCCAGCAACACCAATCCAGTGAGATGGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GQPQGLFWVQHNQNH*QHASQQHQSSEMEN Trigger: GTTTTCCATCTCACTGGATTGGTGTTGCTGGCTTGCGTGCTGGCAGTGATTTTGATTGTGTTGCACCCAGAACAAACCCTGAGGCTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
||
| CDS CCA 90 bp | ATGAAGCTGACTGAGAGCTTGAGTGGCCAGCCTCAGGGTTTGTTCTaGGTGCAACACAATCAAAATCACTGCCAGCACGCAAGCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: MKLTESLSGQPQGLF*VQHNQNHCQHASQQ Trigger: TTGCTGGCTTGCGTGCTGGCAGTGATTTTGATTGTGTTGCACCCAGAACAAACCCTGAGGCTGGCCACTCAAGCTCTCAGTCAGCTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCACCCAGACTGGAGTCTTCCAGAGTATTCCAAGCTACACGTCCTGGATATCTTCTTCCGCTCTTCTaGCTCCTTCAACAGCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VPPRLESSRVFQATRPGYLLPLF*LLQQLP Trigger: TGGAAGCTGTTGAAGGAGCAAGAAGAGCGGAAGAAG...ATATCCAGGACGTGTAGCTTGGAATACTCTGGAAGACTCCAGTCTGGGTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS-3UTR CAA 90 bp | AAGATGTTTAGAGATGAGGCACATCACACTTCCAAAGACCCCAGCAGCATCTTCAGAAGCAGCACCGTTTaGCTCTGGTCCTGGCAGATA | + |
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Preference number: 5 (lower is better) Translates to: KMFRDEAHHTSKDPSSIFRSSTV*LWSWQI Trigger: TATCTGCCAGGACCAGAGCAAAACGGTGCTGCTTCT...GAAGATGCTGCTGGGGTCTTTGGAAGTGTGATGTGCCTCATCTCTAAACATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
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| CDS-3UTR CAA 90 bp | CCTCAGGACCTTAGAGACGATTTTCTAGTGGTCTTCATGCCTCTGCTGTCGAATCTGATGAGGCAGATGTaGACTAGACTGTTGATCACA | + |
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Preference number: 5 (lower is better) Translates to: PQDLRDDFLVVFMPLLSNLMRQM*TRLLIT Trigger: TGTGATCAACAGTCTAGTCAACATCTGCCTCATCAG...ATTCGACAGCAGAGGCATGAAGACCACTAGAAAATCGTCTCTAAGGTCCTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| CDS-3UTR CAA 90 bp | AGAATCAAGATCACTCTAAGGCCCATGAGTTTCCAAAATCCTCAAACAACACTGAGCAAAGCATGGCCATaGGAGACCATGTTCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: RIKITLRPMSFQNPQTTLSKAWP*ETMFRM Trigger: CATCCTGAACATGGTCTCCAATGGCCATGCTTTGCT...CAGTGTTGTTTGAGGATTTTGGAAACTCATGGGCCTTAGAGTGATCTTGATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056328.6 ENSMUST00000215685.2 |
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| CDS-3UTR CAA 90 bp | TTGCGTTTGTCCACGTGTTTTATTCTTTTAGCCAAGATGTTTAGAGATGAGGCAAGAAGCAGCACCGTTTaGCTCTGGTCCTGGCAGATA | + |
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Preference number: 5 (lower is better) Translates to: LRLSTCFILLAKMFRDEARSSTV*LWSWQI Trigger: TATCTGCCAGGACCAGAGCAAAACGGTGCTGCTTCT...TGCCTCATCTCTAAACATCTTGGCTAAAAGAATAAAACACGTGGACAAACGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065379.5 ENSMUST00000160985.2 |
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| CDS-3UTR CAA 90 bp | TTGCGTTTGTCCACGTGTTTTATTCTTTTAGCCAAGATGTTTAGAGATGAGGCACTTCTTCCGCTCTTCTaGCTCCTTCAACAGCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LRLSTCFILLAKMFRDEALLPLF*LLQQLP Trigger: TGGAAGCTGTTGAAGGAGCAAGAAGAGCGGAAGAAG...TGCCTCATCTCTAAACATCTTGGCTAAAAGAATAAAACACGTGGACAAACGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065379.5 |
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| CDS CCA 72 bp | GCCAGCACGCAAGCCAGCAACACCAATCCAGTGAGATaGAAAACCACACAGCTGGCCAGCAGGCGGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: ASTQASNTNPVR*KTTQLASRRAA Trigger: AGCCGCCCGCCTGCTGGCCAGCTGTGTGGTTTTCCATCTCACTGGATTGGTGTTGCTGGCTTGCGTGCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS GCA 72 bp | CTGGCAGGGGGTCCACAGGAGAATGGCCATAGCCACTaGACTGCTGGAGATGTGAGCGAGGAAAGCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LAGGPQENGHSH*TAGDVSEESSH Trigger: GTGGCTGCTTTCCTCGCTCACATCTCCAGCAGTGCAGTGGCTATGGCCATTCTCCTGTGGACCCCCTGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS CCA 72 bp | CCCCGATTCAGGAATTCCCGGCTCCTCAGAGCTCCGTaGGAGGCCAAGTGCCCCAGTAGCTTTAAGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PRFRNSRLLRAP*EAKCPSSFKLS Trigger: GGAGAGCTTAAAGCTACTGGGGCACTTGGCCTCCCACGGAGCTCTGAGGAGCCGGGAATTCCTGAATCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS GCA 72 bp | CTCCTCCCCGATTTGGCCAGCTGGCCAGTTGTAGGCTaGGGCACCAGGCTCATGGCAATAGCACATATGTCA | + |
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Preference number: 6 (lower is better) Translates to: LLPDLASWPVVG*GTRLMAIAHMS Trigger: TGACATATGTGCTATTGCCATGAGCCTGGTGCCGCAGCCTACAACTGGCCAGCTGGCCAAATCGGGGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215685.2 |
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| CDS TCA 72 bp | AGGAGAATGGCCATAGCCACTGCACTGCTGGAGATGTaGGCGAGGAAAGCAGCCACCACGTCTGTCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: RRMAIATALLEM*ARKAATTSVIL Trigger: GAGGATGACAGACGTGGTGGCTGCTTTCCTCGCTCACATCTCCAGCAGTGCAGTGGCTATGGCCATTCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS CAA 72 bp | GTGGTAAGATGGGCGGGCATGAAGCTGACTGAGAGCTaGAGTGGCCAGCCTCAGGGTTTGTTCTGGGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VVRWAGMKLTES*SGQPQGLFWVQ Trigger: TTGCACCCAGAACAAACCCTGAGGCTGGCCACTCAAGCTCTCAGTCAGCTTCATGCCCGCCCATCTTACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS CAA 90 bp | GCAATAGCACATATGTCACAGGCCTGGCGCAGCAAAGCATGGCCATaGGAGACCATGTTCAGGATGCCCCGATTCAGGAATTCCCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: AIAHMSQAWRSKAWP*ETMFRMPRFRNSRL Trigger: GAGCCGGGAATTCCTGAATCGGGGCATCCTGAACATGGTCTCCAATGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATGTGCTATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS CAA 90 bp | GCGGGCATGAAGCTGACTGAGAGCTTGAGTGGCCAGCCTCAGGGTTaGTTCTGGGTGCAACACAATCAAAATCACTGCCAGCACGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: AGMKLTESLSGQPQG*FWVQHNQNHCQHAS Trigger: GCTTGCGTGCTGGCAGTGATTTTGATTGTGTTGCACCCAGAACAAACCCTGAGGCTGGCCACTCAAGCTCTCAGTCAGCTTCATGCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS CAA 90 bp | CCAAAGCCGGTGGTAAGATGGGCGGGCATGAAGCTGACTGAGAGCTaGAGTGGCCAGCCTCAGGGTTTGTTCTGGGTGCAACACAATCAA | + |
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Preference number: 6 (lower is better) Translates to: PKPVVRWAGMKLTES*SGQPQGLFWVQHNQ Trigger: TTGATTGTGTTGCACCCAGAACAAACCCTGAGGCTGGCCACTCAAGCTCTCAGTCAGCTTCATGCCCGCCCATCTTACCACCGGCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS CCA 72 bp | ATAGCACATATGTCACAGGCCTGGCGCAGCAAAGCATaGCCATTGGAGACCATGTTCAGGATGCCCCGATTC | + |
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Preference number: 6 (lower is better) Translates to: IAHMSQAWRSKA*PLETMFRMPRF Trigger: GAATCGGGGCATCCTGAACATGGTCTCCAATGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATGTGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS CCA 72 bp | ACCAGGCTCATGGCAATAGCACATATGTCACAGGCCTaGCGCAGCAAAGCATGGCCATTGGAGACCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: TRLMAIAHMSQA*RSKAWPLETMF Trigger: GAACATGGTCTCCAATGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATGTGCTATTGCCATGAGCCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS CAA 72 bp | CATATGTCACAGGCCTGGCGCAGCAAAGCATGGCCATaGGAGACCATGTTCAGGATGCCCCGATTCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: HMSQAWRSKAWP*ETMFRMPRFRN Trigger: ATTCCTGAATCGGGGCATCCTGAACATGGTCTCCAATGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS CCA 72 bp | TCGACCCAAGTGCAGAAGACTGGTAAGTACCGTGTGTaGCAGATTGTAGATGAAGGCCAAAAGCCAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: STQVQKTGKYRV*QIVDEGQKPGQ Trigger: CTGGCCTGGCTTTTGGCCTTCATCTACAATCTGCCACACACGGTACTTACCAGTCTTCTGCACTTGGGTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS CCA 72 bp | ATATGTCACAGGCCTGGCGCAGCAAAGCATGGCCATTaGAGACCATGTTCAGGATGCCCCGATTCAGGAATT | + |
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Preference number: 6 (lower is better) Translates to: ICHRPGAAKHGH*RPCSGCPDSGI Trigger: AATTCCTGAATCGGGGCATCCTGAACATGGTCTCCAATGGCCATGCTTTGCTGCGCCAGGCCTGTGACATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS CCA 72 bp | ACTGAGAGCTTGAGTGGCCAGCCTCAGGGTTTGTTCTaGGTGCAACACAATCAAAATCACTGCCAGCACGCA | + |
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Preference number: 6 (lower is better) Translates to: TESLSGQPQGLF*VQHNQNHCQHA Trigger: TGCGTGCTGGCAGTGATTTTGATTGTGTTGCACCCAGAACAAACCCTGAGGCTGGCCACTCAAGCTCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS GCA 72 bp | AAGGCCAGCAAAGAAAGCAGGAATCCTCGACCCAAGTaGAGAAGACTGGTAAGTACCGTGTGTGGCAGATTG | + |
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Preference number: 6 (lower is better) Translates to: KASKESRNPRPK*RRLVSTVCGRL Trigger: CAATCTGCCACACACGGTACTTACCAGTCTTCTGCACTTGGGTCGAGGATTCCTGCTTTCTTTGCTGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000215685.2 |
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| CDS GCA 72 bp | CAGGGTTTGTTCTGGGTGCAACACAATCAAAATCACTaGCAGCACGCAAGCCAGCAACACCAATCCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: QGLFWVQHNQNH*QHASQQHQSSE Trigger: CTCACTGGATTGGTGTTGCTGGCTTGCGTGCTGGCAGTGATTTTGATTGTGTTGCACCCAGAACAAACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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| CDS CAA 72 bp | AAGCTGACTGAGAGCTTGAGTGGCCAGCCTCAGGGTTaGTTCTGGGTGCAACACAATCAAAATCACTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: KLTESLSGQPQG*FWVQHNQNHCQ Trigger: CTGGCAGTGATTTTGATTGTGTTGCACCCAGAACAAACCCTGAGGCTGGCCACTCAAGCTCTCAGTCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056328.6 ENSMUST00000065379.5 ENSMUST00000216511.2 |
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