Pregenerated sensors for RNF225 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033967Ensembl transcript IDs: ENSMUST00000045870.5
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGTTTCATACCTGGAAGAAGCAGCTGAGTTGCTCCAACAGACATaGTGGGGCCCATGGCAGCTGGGAGCTTACAAGCTTAGTGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LVSYLEEAAELLQQT*WGPWQLGAYKLSVP Trigger: AGGCACACTAAGCTTGTAAGCTCCCAGCTGCCATGGGCCCCAGCATGTCTGTTGGAGCAACTCAGCTGCTTCTTCCAGGTATGAAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR GCA 90 bp | CTGATGTTCTTCCTCTGGTTTCATACCTGGAAGAAGCAGCTGAGTTaGTCCAACAGACATGCTGGGGCCCATGGCAGCTGGGAGCTTACA | + |
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Preference number: 1 (lower is better) Translates to: LMFFLWFHTWKKQLS*SNRHAGAHGSWELT Trigger: TGTAAGCTCCCAGCTGCCATGGGCCCCAGCATGTCTGTTGGAGCAACTCAGCTGCTTCTTCCAGGTATGAAACCAGAGGAAGAACATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CCA 90 bp | GTTTCATACCTGGAAGAAGCAGCTGAGTTGCTCCAACAGACATGCTaGGGCCCATGGCAGCTGGGAGCTTACAAGCTTAGTGTGCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: VSYLEEAAELLQQTC*GPWQLGAYKLSVPV Trigger: AACAGGCACACTAAGCTTGTAAGCTCCCAGCTGCCATGGGCCCCAGCATGTCTGTTGGAGCAACTCAGCTGCTTCTTCCAGGTATGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR TCA 90 bp | CCATCAAGACCAATGCTAAAGGACCCTGACACAGTTCTGTGTAGATaGCACTGGGGAAGAGGCCGGCTGGACTTCCACAGAGATGAACAT | + |
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Preference number: 1 (lower is better) Translates to: PSRPMLKDPDTVLCR*HWGRGRLDFHRDEH Trigger: ATGTTCATCTCTGTGGAAGTCCAGCCGGCCTCTTCCCCAGTGTCATCTACACAGAACTGTGTCAGGGTCCTTTAGCATTGGTCTTGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CCA 90 bp | CTTGTAACCGCGCTGGCCTCAAACTCACTTGTAGCCTTGAACTCCTaGTCTTCCTGCCTCTATCTTCCAGGTACTTCAGTTTTTGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: LVTALASNSLVALNS*SSCLYLPGTSVFAP Trigger: TGGGGCAAAAACTGAAGTACCTGGAAGATAGAGGCAGGAAGACCAGGAGTTCAAGGCTACAAGTGAGTTTGAGGCCAGCGCGGTTACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CCA 90 bp | GAATCTTGGTCAGGTGTGCAAGTGCTGAAGTTTACAGACTGGCTGTaGGAAGGAGGATGCATGAGCAGAACAGCTGTTTTGTGCTACCCA | + |
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Preference number: 1 (lower is better) Translates to: ESWSGVQVLKFTDWL*EGGCMSRTAVLCYP Trigger: TGGGTAGCACAAAACAGCTGTTCTGCTCATGCATCCTCCTTCCCACAGCCAGTCTGTAAACTTCAGCACTTGCACACCTGACCAAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CCA 90 bp | AAACCACTCAGAAGCCTCCAGATACATAGAAGTCACATTTCATTCTaGAAAACGCTGCCCACCCTTAATATACCGTGTCTCTTGCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: KPLRSLQIHRSHISF*KTLPTLNIPCLLPG Trigger: ACCTGGCAAGAGACACGGTATATTAAGGGTGGGCAGCGTTTTCCAGAATGAAATGTGACTTCTATGTATCTGGAGGCTTCTGAGTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR TCA 90 bp | TCACGGGAATTAAAGATGTCCTCAGAGGATTCTTGTAGCATGGTTTaGAAGAGTTCATGTCTTTCCAGTCCCCAATTCCGAGAAATGGGC | + |
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Preference number: 1 (lower is better) Translates to: SRELKMSSEDSCSMV*KSSCLSSPQFREMG Trigger: GCCCATTTCTCGGAATTGGGGACTGGAAAGACATGAACTCTTTCAAACCATGCTACAAGAATCCTCTGAGGACATCTTTAATTCCCGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR GCA 90 bp | TCCAACAGACATGCTGGGGCCCATGGCAGCTGGGAGCTTACAAGCTTAGTGTGCTGCTACCCAGATGGGTaGCCCAAGCCCCTGCGGCGA | + |
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Preference number: 2 (lower is better) Translates to: SNRHAGAHGSWELTSLVCCYPDG*PKPLRR Trigger: TCGCCGCAGGGGCTTGGGGCACCCATCTGGGTAGCA...GCACACTAAGCTTGTAAGCTCCCAGCTGCCATGGGCCCCAGCATGTCTGTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTGGCATTCCCAGGCTGCCTCCGTCATCCATGATGCAGTCACTCCCTGGCTACTGCCTTCCGGGATaGCACAGAAGTCCCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PVGIPRLPPSSMMQSLPGYCLPG*HRSPSG Trigger: GCCTGAGGGACTTCTGTGTCATCCCGGAAGGCAGTA...GCCAGGGAGTGACTGCATCATGGATGACGGAGGCAGCCTGGGAATGCCAACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGTGGTTCCAGTGATCCAGTGCATTGATCCCAGCCCTGTGGGTGATGTTGGCTTGCTCCAACAGACATaGTGGGGCCCATGGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SVVPVIQCIDPSPVGDVGLLQQT*WGPWQL Trigger: CAGCTGCCATGGGCCCCAGCATGTCTGTTGGAGCAA...GCCAACATCACCCACAGGGCTGGGATCAATGCACTGGATCACTGGAACCACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CAA 90 bp | TCCCCAGCCCTAGCCAGTCCACATTCGCCCCTCCAATTTGGAATCTaGGTCAGGTGTGCAAGTGCTGAAGTTTACAGACTGGCTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: SPALASPHSPLQFGI*VRCASAEVYRLAVG Trigger: TCCCACAGCCAGTCTGTAAACTTCAGCACTTGCACACCTGACCAAGATTCCAAATTGGAGGGGCGAATGTGGACTGGCTAGGGCTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CAA 90 bp | CCTGATGTTCTTCCTCTGGTTTCATACCTGGAAGAAGCAGCTGAGTaGCTCCAACAGACATGCTGGGGCCCATGGCAGCTGGGAGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: PDVLPLVSYLEEAAE*LQQTCWGPWQLGAY Trigger: GTAAGCTCCCAGCTGCCATGGGCCCCAGCATGTCTGTTGGAGCAACTCAGCTGCTTCTTCCAGGTATGAAACCAGAGGAAGAACATCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR CCA 90 bp | TCACTTGTAGCCTTGAACTCCTGGTCTTCCTGCCTCTATCTTCCAGGTACTTCATTTGTGCTACCCAGATaGGTGCCCCAAGCCCCTGCG | + |
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Preference number: 2 (lower is better) Translates to: SLVALNSWSSCLYLPGTSFVLPR*VPQAPA Trigger: CGCAGGGGCTTGGGGCACCCATCTGGGTAGCACAAA...TGAAGTACCTGGAAGATAGAGGCAGGAAGACCAGGAGTTCAAGGCTACAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR TCA 90 bp | AGTGTGGTTCCAGTGATCCAGTGCATTGATCCCAGCCCTGTGGGTGATGTTGGCTTTTCAGAGGCCCTTTaGTCAGCCTATGCAGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: SVVPVIQCIDPSPVGDVGFSEAL*SAYAES Trigger: ACTCTCTGCATAGGCTGATCAAAGGGCCTCTGAAAA...GCCAACATCACCCACAGGGCTGGGATCAATGCACTGGATCACTGGAACCACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR TCA 90 bp | TCACTTGTAGCCTTGAACTCCTGGTCTTCCTGCCTCTATCTTCCAGGTACTTCACTCTGGATCAGCCTGTaGAGCTGGGCAGTGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SLVALNSWSSCLYLPGTSLWISL*SWAVWF Trigger: GAACCACACTGCCCAGCTTCACAGGCTGATCCAGAG...TGAAGTACCTGGAAGATAGAGGCAGGAAGACCAGGAGTTCAAGGCTACAAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR GCA 90 bp | GTTCAATGCCCAGCATCTCCCGTACCCCCATACACAAATCTTGAGTTGGGTAATCCAGACCACTCACTCTaGTCCCCTCTGGATCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: VQCPASPVPPYTNLELGNPDHSL*SPLDQP Trigger: AGGCTGATCCAGAGGGGAGCAGAGTGAGTGGTCTGG...ATTACCCAACTCAAGATTTGTGTATGGGGGTACGGGAGATGCTGGGCATTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTGATGTTCTTCCTCTGGTTTCATACCTGGAAGAAGCAGCTGAGTTGCTCACATGCTGGGGCCCATaGCAGCTGGGAGCTTACAAG | + |
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Preference number: 2 (lower is better) Translates to: FPDVLPLVSYLEEAAELLTCWGP*QLGAYK Trigger: CTTGTAAGCTCCCAGCTGCCATGGGCCCCAGCATGT...GAGCAACTCAGCTGCTTCTTCCAGGTATGAAACCAGAGGAAGAACATCAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR TCA 90 bp | TCACTTGTAGCCTTGAACTCCTGGTCTTCCTGCCTCTATCTTCCAGGTACTTCAGTGTCTCTTGCCAGGTaGGGTGAGGTAGGACATGGT | + |
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Preference number: 2 (lower is better) Translates to: SLVALNSWSSCLYLPGTSVSLAR*GEVGHG Trigger: ACCATGTCCTACCTCACCTCACCTGGCAAGAGACAC...TGAAGTACCTGGAAGATAGAGGCAGGAAGACCAGGAGTTCAAGGCTACAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCCCCAAGCCCCTGCGGCGAGCCCAAAGGATGAGTAGATCAGATCCTTCAAGGATTCTTGTAGCATaGTTTGAAAGAGTTCATGTC | + |
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Preference number: 2 (lower is better) Translates to: GCPKPLRRAQRMSRSDPSRILVA*FERVHV Trigger: GACATGAACTCTTTCAAACCATGCTACAAGAATCCT...TGAAGGATCTGATCTACTCATCCTTTGGGCTCGCCGCAGGGGCTTGGGGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR CCA 90 bp | TCACTTGTAGCCTTGAACTCCTGGTCTTCCTGCCTCTATCTTCCAGGTACTTCATTGATCCCAGCCCTGTaGGTGATGTTGGCACCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SLVALNSWSSCLYLPGTSLIPAL*VMLAPK Trigger: CTTGGGTGCCAACATCACCCACAGGGCTGGGATCAA...TGAAGTACCTGGAAGATAGAGGCAGGAAGACCAGGAGTTCAAGGCTACAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CAA 90 bp | CTTTCCAGTCCCCAATTCCGAGAAATGGGCACTTTAGTATGCATTTaGTTACTGCCTTCCGGGATGACACAGAAGTCCCTCAGGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LSSPQFREMGTLVCI*LLPSGMTQKSLRPG Trigger: TCCTGGCCTGAGGGACTTCTGTGTCATCCCGGAAGGCAGTAACAAAATGCATACTAAAGTGCCCATTTCTCGGAATTGGGGACTGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR TCA 90 bp | GTTCAATGCCCAGCATCTCCCGTACCCCCATACACAAATCTTGAGTTGGGTAATCCTGGAAGAAGCAGCTaGGTTGCTCCAACAGACATG | + |
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Preference number: 2 (lower is better) Translates to: VQCPASPVPPYTNLELGNPGRSS*VAPTDM Trigger: CATGTCTGTTGGAGCAACTCAGCTGCTTCTTCCAGG...ATTACCCAACTCAAGATTTGTGTATGGGGGTACGGGAGATGCTGGGCATTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAGGAGGACATGGGACTGTTGGCTCCCTAACTTTATTGATTGATGATTGGTTCAGTCCCCAGAGCTaGCCAGGAGTGTCTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SSGGHGTVGSLTLLIDDWFSPQS*PGVSPA Trigger: TGCTGGAGACACTCCTGGCCAGCTCTGGGGACTGAA...CCAATCATCAATCAATAAAGTTAGGGAGCCAACAGTCCCATGTCCTCCTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CAA 90 bp | GAGAGTAGCTGCCTTCCTCCTACTCTGTCTAAGCAAAGAAGGCTTTaGGGAGAAAGACAGGAGACATCTACCACAGAGGTGAACACTGGA | + |
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Preference number: 2 (lower is better) Translates to: ESSCLPPTLSKQRRL*GERQETSTTEVNTG Trigger: TCCAGTGTTCACCTCTGTGGTAGATGTCTCCTGTCTTTCTCCCAAAAGCCTTCTTTGCTTAGACAGAGTAGGAGGAAGGCAGCTACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR GCA 90 bp | TCACTTGTAGCCTTGAACTCCTGGTCTTCCTGCCTCTATCTTCCAGGTACTTCAAAGAAGCAGCTGAGTTaGTCCAACAGACATGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SLVALNSWSSCLYLPGTSKKQLS*SNRHAG Trigger: CCCAGCATGTCTGTTGGAGCAACTCAGCTGCTTCTT...TGAAGTACCTGGAAGATAGAGGCAGGAAGACCAGGAGTTCAAGGCTACAAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR GCA 90 bp | GTTCAATGCCCAGCATCTCCCGTACCCCCATACACAAATCTTGAGTTGGGTAATTTTTCGTGTCATCCTTaGGCAGGGGCCATGCTAATC | + |
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Preference number: 2 (lower is better) Translates to: VQCPASPVPPYTNLELGNFSCHP*AGAMLI Trigger: GATTAGCATGGCCCCTGCGCAAGGATGACACGAAAA...ATTACCCAACTCAAGATTTGTGTATGGGGGTACGGGAGATGCTGGGCATTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR CCA 90 bp | GAATCCCTCAGAGTCTTCAGGAGGACATGGGACTGTTGGCTCCCTAACTTTATTCTGAAGTTTACAGACTaGCTGTGGGAAGGAGGATGC | + |
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Preference number: 2 (lower is better) Translates to: ESLRVFRRTWDCWLPNFILKFTD*LWEGGC Trigger: GCATCCTCCTTCCCACAGCCAGTCTGTAAACTTCAG...AATAAAGTTAGGGAGCCAACAGTCCCATGTCCTCCTGAAGACTCTGAGGGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CAA 90 bp | CTTGGGTTCAATGCCCAGCATCTCCCGTACCCCCATACACAAATCTaGAGTTGGGTAATTGTCTTTGATTGTCTGGATAGATGGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LGFNAQHLPYPHTQI*SWVIVFDCLDRWVQ Trigger: CTGGACCCATCTATCCAGACAATCAAAGACAATTACCCAACTCAAGATTTGTGTATGGGGGTACGGGAGATGCTGGGCATTGAACCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAGGAGGACATGGGACTGTTGGCTCCCTAACTTTATTGATTGATGATTGGGGCGAGCCCAAAGGATaGGTAGATCAGATCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SSGGHGTVGSLTLLIDDWGEPKG*VDQILQ Trigger: CTGAAGGATCTGATCTACTCATCCTTTGGGCTCGCC...CCAATCATCAATCAATAAAGTTAGGGAGCCAACAGTCCCATGTCCTCCTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR TCA 90 bp | ATACATAGAAGTCACATTTCATTCTGGAAAACGCTGCCCACCCTTAATATACCGACAGTTCTGTGTAGATaGCACTGGGGAAGAGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: IHRSHISFWKTLPTLNIPTVLCR*HWGRGR Trigger: CCGGCCTCTTCCCCAGTGTCATCTACACAGAACTGT...CGGTATATTAAGGGTGGGCAGCGTTTTCCAGAATGAAATGTGACTTCTATGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR GCA 90 bp | TTCCCTGATGTTCTTCCTCTGGTTTCATACCTGGAAGAAGCAGCTGAGTTGCTCCATTCTGGAAAACGCTaGCCACCCTTAATATACCGT | + |
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Preference number: 2 (lower is better) Translates to: FPDVLPLVSYLEEAAELLHSGKR*PPLIYR Trigger: ACGGTATATTAAGGGTGGGCAGCGTTTTCCAGAATG...GAGCAACTCAGCTGCTTCTTCCAGGTATGAAACCAGAGGAAGAACATCAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR CCA 90 bp | GTCACATTTCATTCTGGAAAACGCTGCCCACCCTTAATATACCGTGTCTCTTGCGAGAGTACCTTTAGCTaGATGGTCACGGGAATTAAA | + |
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Preference number: 2 (lower is better) Translates to: VTFHSGKRCPPLIYRVSCESTFS*MVTGIK Trigger: TTTAATTCCCGTGACCATCCAGCTAAAGGTACTCTC...GCAAGAGACACGGTATATTAAGGGTGGGCAGCGTTTTCCAGAATGAAATGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CAA 90 bp | ATAGCTCCAATGTCAAGGACATATGATGATGTTTTGATGCTGGATTaGAGGGAACCACAAGCCAAGGAAGGCAGTCTAGAAACTGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: IAPMSRTYDDVLMLD*REPQAKEGSLETGK Trigger: TTTTCCAGTTTCTAGACTGCCTTCCTTGGCTTGTGGTTCCCTCAAATCCAGCATCAAAACATCATCATATGTCCTTGACATTGGAGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAGGAGGACATGGGACTGTTGGCTCCCTAACTTTATTGATTGATGATTGGATGGGCACTTTAGTATaGATTTTGTTACTGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SSGGHGTVGSLTLLIDDWMGTLV*ILLLPS Trigger: GGAAGGCAGTAACAAAATGCATACTAAAGTGCCCAT...CCAATCATCAATCAATAAAGTTAGGGAGCCAACAGTCCCATGTCCTCCTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR GCA 72 bp | ATGAGCAGAACAGCTGTTTTGTGCTACCCAGATGGGTaGCCCAAGCCCCTGCGGCGAGCCCAAAGGATGAGT | + |
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Preference number: 3 (lower is better) Translates to: MSRTAVLCYPDG*PKPLRRAQRMS Trigger: ACTCATCCTTTGGGCTCGCCGCAGGGGCTTGGGGCACCCATCTGGGTAGCACAAAACAGCTGTTCTGCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR GCA 72 bp | TACCTGGAAGAAGCAGCTGAGTTGCTCCAACAGACATaGTGGGGCCCATGGCAGCTGGGAGCTTACAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: YLEEAAELLQQT*WGPWQLGAYKL Trigger: AAGCTTGTAAGCTCCCAGCTGCCATGGGCCCCAGCATGTCTGTTGGAGCAACTCAGCTGCTTCTTCCAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CCA 72 bp | AGTTGCTCCAACAGACATGCTGGGGCCCATGGCAGCTaGGAGCTTACAAGCTTAGTGTGCCTGTTGGCATTC | + |
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Preference number: 3 (lower is better) Translates to: SCSNRHAGAHGS*ELTSLVCLLAF Trigger: GAATGCCAACAGGCACACTAAGCTTGTAAGCTCCCAGCTGCCATGGGCCCCAGCATGTCTGTTGGAGCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR CAA 90 bp | TCCAACAGACATGCTGGGGCCCATGGCAGCTGGGAGCTTACAAGCTTAGTGTGCGTTTTCAGAGGCCCTTaGATCAGCCTATGCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: SNRHAGAHGSWELTSLVCVFRGP*ISLCRE Trigger: CTCTCTGCATAGGCTGATCAAAGGGCCTCTGAAAAC...GCACACTAAGCTTGTAAGCTCCCAGCTGCCATGGGCCCCAGCATGTCTGTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR TCA 72 bp | TGCCTGTTGGCATTCCCAGGCTGCCTCCGTCATCCATaGTGCAGTCACTCCCTGGCAACTGTTCTGAATCAA | + |
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Preference number: 3 (lower is better) Translates to: CLLAFPGCLRHP*CSHSLATVLNQ Trigger: TTGATTCAGAACAGTTGCCAGGGAGTGACTGCATCATGGATGACGGAGGCAGCCTGGGAATGCCAACAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CCA 72 bp | GAAGATACACCCCTGGGTTCCCTGATGTTCTTCCTCTaGTTTCATACCTGGAAGAAGCAGCTGAGTTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: EDTPLGSLMFFL*FHTWKKQLSCS Trigger: GGAGCAACTCAGCTGCTTCTTCCAGGTATGAAACCAGAGGAAGAACATCAGGGAACCCAGGGGTGTATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CCA 72 bp | GCGCTGGCCTCAAACTCACTTGTAGCCTTGAACTCCTaGTCTTCCTGCCTCTATCTTCCAGGTACTTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: ALASNSLVALNS*SSCLYLPGTSV Trigger: AACTGAAGTACCTGGAAGATAGAGGCAGGAAGACCAGGAGTTCAAGGCTACAAGTGAGTTTGAGGCCAGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR CAA 90 bp | AGTGTGGTTCCAGTGATCCAGTGCATTGATCCCAGCCCTGTGGGTGATGTTGGCACTTTAGTATGCATTTaGTTACTGCCTTCCGGGATG | + |
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Preference number: 3 (lower is better) Translates to: SVVPVIQCIDPSPVGDVGTLVCI*LLPSGM Trigger: CATCCCGGAAGGCAGTAACAAAATGCATACTAAAGT...GCCAACATCACCCACAGGGCTGGGATCAATGCACTGGATCACTGGAACCACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTGATGTTCTTCCTCTGGTTTCATACCTGGAAGAAGCAGCTGAGTTGCTCAGCAGAACAGCTGTTTaGTGCTACCCAGATGGGTGC | + |
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Preference number: 3 (lower is better) Translates to: FPDVLPLVSYLEEAAELLSRTAV*CYPDGC Trigger: GCACCCATCTGGGTAGCACAAAACAGCTGTTCTGCT...GAGCAACTCAGCTGCTTCTTCCAGGTATGAAACCAGAGGAAGAACATCAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR TCA 72 bp | GGAGGACCAGACCTTCCCTCATTGAATATTTCTGTCTaGGCTACAGGAGGCCTTGGCTCTCTAAGCCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: GGPDLPSLNISV*ATGGLGSLSLD Trigger: ATCAAGGCTTAGAGAGCCAAGGCCTCCTGTAGCTCAGACAGAAATATTCAATGAGGGAAGGTCTGGTCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR TCA 72 bp | CTCATGTTAGCTAGGGAGGACCAGACCTTCCCTCATTaGATATTTCTGTCTGAGCTACAGGAGGCCTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: LMLAREDQTFPH*IFLSELQEALA Trigger: AGCCAAGGCCTCCTGTAGCTCAGACAGAAATATTCAATGAGGGAAGGTCTGGTCCTCCCTAGCTAACATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR GCA 72 bp | GTGCTGAAGTTTACAGACTGGCTGTGGGAAGGAGGATaGATGAGCAGAACAGCTGTTTTGTGCTACCCAGAT | + |
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Preference number: 3 (lower is better) Translates to: VLKFTDWLWEGG*MSRTAVLCYPD Trigger: ATCTGGGTAGCACAAAACAGCTGTTCTGCTCATGCATCCTCCTTCCCACAGCCAGTCTGTAAACTTCAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| 3UTR CCA 72 bp | TCAGGTGTGCAAGTGCTGAAGTTTACAGACTGGCTGTaGGAAGGAGGATGCATGAGCAGAACAGCTGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SGVQVLKFTDWL*EGGCMSRTAVL Trigger: CAAAACAGCTGTTCTGCTCATGCATCCTCCTTCCCACAGCCAGTCTGTAAACTTCAGCACTTGCACACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR CCA 72 bp | TCTAGACCTACAAAGGTATGCCGTTCATTAAGGTCATaGCCAGAGAGAGTACCTTTAGCTGGATGGTCACGG | + |
|
Preference number: 3 (lower is better) Translates to: SRPTKVCRSLRS*PERVPLAGWSR Trigger: CCGTGACCATCCAGCTAAAGGTACTCTCTCTGGCCATGACCTTAATGAACGGCATACCTTTGTAGGTCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR GCA 72 bp | TCCAGTCCCCAATTCCGAGAAATGGGCACTTTAGTATaGATTTTGTTACTGCCTTCCGGGATGACACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSPQFREMGTLV*ILLLPSGMTQK Trigger: CTTCTGTGTCATCCCGGAAGGCAGTAACAAAATGCATACTAAAGTGCCCATTTCTCGGAATTGGGGACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR GCA 72 bp | TCAAACTCACTTGTAGCCTTGAACTCCTGGTCTTCCTaGCTCTATCTTCCAGGTACTTCAGTTTTTGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SNSLVALNSWSS*LYLPGTSVFAP Trigger: TGGGGCAAAAACTGAAGTACCTGGAAGATAGAGGCAGGAAGACCAGGAGTTCAAGGCTACAAGTGAGTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR-3UTR CAA 90 bp | GTCACATTTCATTCTGGAAAACGCTGCCCACCCTTAATATACCGTGTCTCTTGCAAGCAAAGAAGGCTTTaGGGAGAAAGACAGGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: VTFHSGKRCPPLIYRVSCKQRRL*GERQET Trigger: TGTCTCCTGTCTTTCTCCCAAAAGCCTTCTTTGCTT...GCAAGAGACACGGTATATTAAGGGTGGGCAGCGTTTTCCAGAATGAAATGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR CCA 72 bp | TTCATTAAGGTCATGGCCAGAGAGAGTACCTTTAGCTaGATGGTCACGGGAATTAAAGATGTCCTCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FIKVMARESTFS*MVTGIKDVLRG Trigger: TCCTCTGAGGACATCTTTAATTCCCGTGACCATCCAGCTAAAGGTACTCTCTCTGGCCATGACCTTAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR CCA 72 bp | CAGCATCTCCCGTACCCCCATACACAAATCTTGAGTTaGGTAATTGTCTTTGATTGTCTGGATAGATGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QHLPYPHTQILS*VIVFDCLDRWV Trigger: GACCCATCTATCCAGACAATCAAAGACAATTACCCAACTCAAGATTTGTGTATGGGGGTACGGGAGATGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR GCA 72 bp | AGATACATAGAAGTCACATTTCATTCTGGAAAACGCTaGCCACCCTTAATATACCGTGTCTCTTGCCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RYIEVTFHSGKR*PPLIYRVSCQV Trigger: CACCTGGCAAGAGACACGGTATATTAAGGGTGGGCAGCGTTTTCCAGAATGAAATGTGACTTCTATGTATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR CCA 72 bp | AGAAGCCTCCAGATACATAGAAGTCACATTTCATTCTaGAAAACGCTGCCCACCCTTAATATACCGTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RSLQIHRSHISF*KTLPTLNIPCL Trigger: GAGACACGGTATATTAAGGGTGGGCAGCGTTTTCCAGAATGAAATGTGACTTCTATGTATCTGGAGGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR TCA 72 bp | TTAAAGATGTCCTCAGAGGATTCTTGTAGCATGGTTTaGAAGAGTTCATGTCTTTCCAGTCCCCAATTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LKMSSEDSCSMV*KSSCLSSPQFR Trigger: TCGGAATTGGGGACTGGAAAGACATGAACTCTTTCAAACCATGCTACAAGAATCCTCTGAGGACATCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTTGGCATTCCCAGGCTGCCTCCGTCATCCATGATGCAGTCACTCCCTGGCCGGTACTTGGGGAGCTaGGGCCAGAGCCCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PVGIPRLPPSSMMQSLPGRYLGS*GQSPGM Trigger: CATCCCAGGGCTCTGGCCCCAGCTCCCCAAGTACCG...GCCAGGGAGTGACTGCATCATGGATGACGGAGGCAGCCTGGGAATGCCAACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR GCA 90 bp | AGTGTGGTTCCAGTGATCCAGTGCATTGATCCCAGCCCTGTGGGTGATGTTGGCCATGGGGCAAGCCACTaGATCGCCGCCACCCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVVPVIQCIDPSPVGDVGHGASH*IAATRS Trigger: ACTGCGGGTGGCGGCGATGCAGTGGCTTGCCCCATG...GCCAACATCACCCACAGGGCTGGGATCAATGCACTGGATCACTGGAACCACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR GCA 90 bp | TCCAACAGACATGCTGGGGCCCATGGCAGCTGGGAGCTTACAAGCTTAGTGTGCAGCCAGCGACAGGCGTaGCAGGCACTCGAGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNRHAGAHGSWELTSLVCSQRQA*QALETE Trigger: TTCTGTCTCGAGTGCCTGGCACGCCTGTCGCTGGCT...GCACACTAAGCTTGTAAGCTCCCAGCTGCCATGGGCCCCAGCATGTCTGTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR TCA 90 bp | GAATCCCTCAGAGTCTTCAGGAGGACATGGGACTGTTGGCTCCCTAACTTTATTGGGCAGAATGGGGCCTaGGCCAGGGGTGCCATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLRVFRRTWDCWLPNFIGQNGA*ARGAIA Trigger: GGCGATGGCACCCCTGGCTCAGGCCCCATTCTGCCC...AATAAAGTTAGGGAGCCAACAGTCCCATGTCCTCCTGAAGACTCTGAGGGATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR TCA 90 bp | CAACTGATGCCTGGTGCTGAGGACATACAGGTAAATAAACCACTCAGAAGCCTCGCCAGCGCCACAGTCTaGGGCCGCACACCGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: QLMPGAEDIQVNKPLRSLASATV*GRTPEL Trigger: CAATTCCGGTGTGCGGCCTCAGACTGTGGCGCTGGC...GAGGCTTCTGAGTGGTTTATTTACCTGTATGTCCTCAGCACCAGGCATCAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR CAA 72 bp | CTTCCTCTGGTTTCATACCTGGAAGAAGCAGCTGAGTaGCTCCAACAGACATGCTGGGGCCCATGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLVSYLEEAAE*LQQTCWGPWQL Trigger: CAGCTGCCATGGGCCCCAGCATGTCTGTTGGAGCAACTCAGCTGCTTCTTCCAGGTATGAAACCAGAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTCCAGTCCCCAATTCCGAGAAATGGGCACTTTAGTATGCATTTTGTTAGCAAACCGGGCTGTGTaGGCAGAGCGGGCAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLSSPQFREMGTLVCILLANRAV*AERAAP Trigger: GGGGGCTGCCCGCTCTGCCCACACAGCCCGGTTTGC...TAACAAAATGCATACTAAAGTGCCCATTTCTCGGAATTGGGGACTGGAAAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR CAA 72 bp | CTTGTAACCGCGCTGGCCTCAAACTCACTTGTAGCCTaGAACTCCTGGTCTTCCTGCCTCTATCTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVTALASNSLVA*NSWSSCLYLPG Trigger: ACCTGGAAGATAGAGGCAGGAAGACCAGGAGTTCAAGGCTACAAGTGAGTTTGAGGCCAGCGCGGTTACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR TCA 90 bp | GTTCAATGCCCAGCATCTCCCGTACCCCCATACACAAATCTTGAGTTGGGTAATTGGCGTGGGCCGCGGTaGAACCCAGAAGTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQCPASPVPPYTNLELGNWRGPR*NPEVIF Trigger: GAAAATGACTTCTGGGTTTCACCGCGGCCCACGCCA...ATTACCCAACTCAAGATTTGTGTATGGGGGTACGGGAGATGCTGGGCATTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR CCA 90 bp | ATACATAGAAGTCACATTTCATTCTGGAAAACGCTGCCCACCCTTAATATACCGCGTCGTGTCCAGGCATaGGTCCAGGGCGCCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IHRSHISFWKTLPTLNIPRRVQA*VQGATG Trigger: GCCAGTGGCGCCCTGGACCCATGCCTGGACACGACG...CGGTATATTAAGGGTGGGCAGCGTTTTCCAGAATGAAATGTGACTTCTATGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAGACAGGAGACATCTACCACAGAGGTGAACACTGGAAAGACTTAGACTTTAGCAGAGACGGTACTTaGGGAGCTGGGGCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKTGDIYHRGEHWKDLDFSRDGT*GAGARA Trigger: GGCTCTGGCCCCAGCTCCCCAAGTACCGTCTCTGCT...AAAGTCTAAGTCTTTCCAGTGTTCACCTCTGTGGTAGATGTCTCCTGTCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR TCA 90 bp | TTCCCTGATGTTCTTCCTCTGGTTTCATACCTGGAAGAAGCAGCTGAGTTGCTCTTCTTCCCATCAGCCTaGGCCTTCGGGTTCCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FPDVLPLVSYLEEAAELLFFPSA*AFGFQL Trigger: TAACTGGAACCCGAAGGCTCAGGCTGATGGGAAGAA...GAGCAACTCAGCTGCTTCTTCCAGGTATGAAACCAGAGGAAGAACATCAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR CAA 72 bp | CTAGCCAGTCCACATTCGCCCCTCCAATTTGGAATCTaGGTCAGGTGTGCAAGTGCTGAAGTTTACAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LASPHSPLQFGI*VRCASAEVYRL Trigger: CAGTCTGTAAACTTCAGCACTTGCACACCTGACCAAGATTCCAAATTGGAGGGGCGAATGTGGACTGGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR GCA 90 bp | AGAAAGACAGGAGACATCTACCACAGAGGTGAACACTGGAAAGACTTAGACTTTGCCCTCCTCCTCTTCTaGATCCTCGTCTTCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKTGDIYHRGEHWKDLDFALLLF*ILVFAS Trigger: AGAGGCGAAGACGAGGATGCAGAAGAGGAGGAGGGC...AAAGTCTAAGTCTTTCCAGTGTTCACCTCTGTGGTAGATGTCTCCTGTCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR CAA 72 bp | CCCCAATTCCGAGAAATGGGCACTTTAGTATGCATTTaGTTACTGCCTTCCGGGATGACACAGAAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQFREMGTLVCI*LLPSGMTQKSL Trigger: GAGGGACTTCTGTGTCATCCCGGAAGGCAGTAACAAAATGCATACTAAAGTGCCCATTTCTCGGAATTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR CAA 72 bp | TGCCTTCCTCCTACTCTGTCTAAGCAAAGAAGGCTTTaGGGAGAAAGACAGGAGACATCTACCACAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLPPTLSKQRRL*GERQETSTTEV Trigger: CACCTCTGTGGTAGATGTCTCCTGTCTTTCTCCCAAAAGCCTTCTTTGCTTAGACAGAGTAGGAGGAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGGAGGACATGGGACTGTTGGCTCCCTAACTTTATTGATTGATGATTGGTCGAGACAGAATACGTaGCCGCAGTCCAGGCGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSGGHGTVGSLTLLIDDWSRQNT*PQSRRL Trigger: TAAACGCCTGGACTGCGGTCACGTATTCTGTCTCGA...CCAATCATCAATCAATAAAGTTAGGGAGCCAACAGTCCCATGTCCTCCTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTCCAGTCCCCAATTCCGAGAAATGGGCACTTTAGTATGCATTTTGTTAGTTGAAAGCCCATGCTaGACTGCTCAGGGACAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CLSSPQFREMGTLVCILLVESPC*TAQGQA Trigger: CGCCTGTCCCTGAGCAGTCCAGCATGGGCTTTCAAC...TAACAAAATGCATACTAAAGTGCCCATTTCTCGGAATTGGGGACTGGAAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR TCA 90 bp | TGTCTTTCCAGTCCCCAATTCCGAGAAATGGGCACTTTAGTATGCATTTTGTTATCTGCCTTTGGTGTTTaGTCTGGTGGTAAATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLSSPQFREMGTLVCILLSAFGV*SGGKSG Trigger: CCCGGATTTACCACCAGATCAAACACCAAAGGCAGA...TAACAAAATGCATACTAAAGTGCCCATTTCTCGGAATTGGGGACTGGAAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR CAA 72 bp | ATGTCAAGGACATATGATGATGTTTTGATGCTGGATTaGAGGGAACCACAAGCCAAGGAAGGCAGTCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MSRTYDDVLMLD*REPQAKEGSLE Trigger: TTCTAGACTGCCTTCCTTGGCTTGTGGTTCCCTCAAATCCAGCATCAAAACATCATCATATGTCCTTGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| 3UTR CAA 72 bp | AAGATAGCTCCAATGTCAAGGACATATGATGATGTTTaGATGCTGGATTTGAGGGAACCACAAGCCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KIAPMSRTYDDV*MLDLREPQAKE Trigger: TTCCTTGGCTTGTGGTTCCCTCAAATCCAGCATCAAAACATCATCATATGTCCTTGACATTGGAGCTATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS GCA 90 bp | GCGCGGGGCCAAGCGTGTGGGCGCGCGGCACATGGGGCAAGCCACTaGATCGCCGCCACCCGCAGTAGCCAGCGACAGGCGTGCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARGQACGRAAHGASH*IAATRSSQRQACQA Trigger: TGCCTGGCACGCCTGTCGCTGGCTACTGCGGGTGGCGGCGATGCAGTGGCTTGCCCCATGTGCCGCGCGCCCACACGCTTGGCCCCGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS CCA 90 bp | TGGGGCACGCACTGTGCGGCTCTTTCGCGGCCCGGGAGACGGCGGTaGTGGCCGCAGGTACAGGAGACCCCGGCGTCGGTCAAAGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WGTHCAALSRPGRRR*WPQVQETPASVKAH Trigger: GTGCGCTTTGACCGACGCCGGGGTCTCCTGTACCTGCGGCCACCACCGCCGTCTCCCGGGCCGCGAAAGAGCCGCACAGTGCGTGCCCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS CCA 90 bp | GGCACGCACTGTGCGGCTCTTTCGCGGCCCGGGAGACGGCGGTGGTaGCCGCAGGTACAGGAGACCCCGGCGTCGGTCAAAGCGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTHCAALSRPGRRRW*PQVQETPASVKAHR Trigger: TCTGTGCGCTTTGACCGACGCCGGGGTCTCCTGTACCTGCGGCCACCACCGCCGTCTCCCGGGCCGCGAAAGAGCCGCACAGTGCGTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS TCA 90 bp | CCACGAGACCCGCGGCCACCAGCACAGCTAGCGCCACTGCTGCGTTaGAAGCCCATGCTGGACTGCTCAGGGACAGGCGACGTGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PRDPRPPAQLAPLLR*KPMLDCSGTGDVTA Trigger: CGCTGTCACGTCGCCTGTCCCTGAGCAGTCCAGCATGGGCTTTCAACGCAGCAGTGGCGCTAGCTGTGCTGGTGGCCGCGGGTCTCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS GCA 90 bp | GCAAGCCACTGCATCGCCGCCACCCGCAGTAGCCAGCGACAGGCGTaGCAGGCACTCGAGACAGAATACGTGACCGCAGTCCAGGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ASHCIAATRSSQRQA*QALETEYVTAVQAF Trigger: AAACGCCTGGACTGCGGTCACGTATTCTGTCTCGAGTGCCTGGCACGCCTGTCGCTGGCTACTGCGGGTGGCGGCGATGCAGTGGCTTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS TCA 90 bp | GCAGTAGCCAGCGACAGGCGTGCCAGGCACTCGAGACAGAATACGTaGCCGCAGTCCAGGCGTTTAGGCAGCTTGAAAATGCCGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AVASDRRARHSRQNT*PQSRRLGSLKMPSK Trigger: CTTCGACGGCATTTTCAAGCTGCCTAAACGCCTGGACTGCGGTCACGTATTCTGTCTCGAGTGCCTGGCACGCCTGTCGCTGGCTACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR CAA 90 bp | TCACTTGTAGCCTTGAACTCCTGGTCTTCCTGCCTCTATCTTCCAGGTACTTCAGAGCAGAGACGGTACTaGGGGAGCTGGGGCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLVALNSWSSCLYLPGTSEQRRY*GSWGQS Trigger: GCTCTGGCCCCAGCTCCCCAAGTACCGTCTCTGCTC...TGAAGTACCTGGAAGATAGAGGCAGGAAGACCAGGAGTTCAAGGCTACAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR CAA 90 bp | ATACATAGAAGTCACATTTCATTCTGGAAAACGCTGCCCACCCTTAATATACCGGGTCCAGGTCAGGCTTaGTGGGGCGTCGTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IHRSHISFWKTLPTLNIPGPGQA*WGVVSR Trigger: CCTGGACACGACGCCCCACAAAGCCTGACCTGGACC...CGGTATATTAAGGGTGGGCAGCGTTTTCCAGAATGAAATGTGACTTCTATGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR CAA 90 bp | AGAAAGACAGGAGACATCTACCACAGAGGTGAACACTGGAAAGACTTAGACTTTAGCTCGGGCGTGTCCTaGGTAGCCTCTGGCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RKTGDIYHRGEHWKDLDFSSGVS*VASGRV Trigger: TACCCTGCCAGAGGCTACCAAGGACACGCCCGAGCT...AAAGTCTAAGTCTTTCCAGTGTTCACCTCTGTGGTAGATGTCTCCTGTCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS-3UTR CAA 90 bp | GTCACATTTCATTCTGGAAAACGCTGCCCACCCTTAATATACCGTGTCTCTTGCAGGCGTTTAGGCAGCTaGAAAATGCCGTCGAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VTFHSGKRCPPLIYRVSCRRLGS*KMPSKG Trigger: ACCCTTCGACGGCATTTTCAAGCTGCCTAAACGCCT...GCAAGAGACACGGTATATTAAGGGTGGGCAGCGTTTTCCAGAATGAAATGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS CCA 72 bp | CAGCGGGCGGCCGAGGCGAAGCGGGGGTGGAGGCGGTaGGGCACGCACTGTGCGGCTCTTTCGCGGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QRAAEAKRGWRR*GTHCAALSRPG Trigger: CCCGGGCCGCGAAAGAGCCGCACAGTGCGTGCCCCACCGCCTCCACCCCCGCTTCGCCTCGGCCGCCCGCTG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS GCA 72 bp | GGCGAAGCGGGGGTGGAGGCGGTGGGGCACGCACTGTaGGGCTCTTTCGCGGCCCGGGAGACGGCGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GEAGVEAVGHAL*GSFAARETAVV Trigger: CACCACCGCCGTCTCCCGGGCCGCGAAAGAGCCGCACAGTGCGTGCCCCACCGCCTCCACCCCCGCTTCGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS CCA 72 bp | CACTGTGCGGCTCTTTCGCGGCCCGGGAGACGGCGGTaGTGGCCGCAGGTACAGGAGACCCCGGCGTCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HCAALSRPGRRR*WPQVQETPASV Trigger: GACCGACGCCGGGGTCTCCTGTACCTGCGGCCACCACCGCCGTCTCCCGGGCCGCGAAAGAGCCGCACAGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS GCA 72 bp | CAAGCGTGTGGGCGCGCGGCACATGGGGCAAGCCACTaGATCGCCGCCACCCGCAGTAGCCAGCGACAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: QACGRAAHGASH*IAATRSSQRQA Trigger: CGCCTGTCGCTGGCTACTGCGGGTGGCGGCGATGCAGTGGCTTGCCCCATGTGCCGCGCGCCCACACGCTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS TCA 72 bp | GAAAGCCCATGCTGGACTGCTCAGGGACAGGCGACGTaGCAGCGGGCGGCCGAGGCGAAGCGGGGGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ESPCWTAQGQAT*QRAAEAKRGWR Trigger: CCTCCACCCCCGCTTCGCCTCGGCCGCCCGCTGTCACGTCGCCTGTCCCTGAGCAGTCCAGCATGGGCTTTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS CCA 72 bp | TGTGCGGCTCTTTCGCGGCCCGGGAGACGGCGGTGGTaGCCGCAGGTACAGGAGACCCCGGCGTCGGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: CAALSRPGRRRW*PQVQETPASVK Trigger: TTTGACCGACGCCGGGGTCTCCTGTACCTGCGGCCACCACCGCCGTCTCCCGGGCCGCGAAAGAGCCGCACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS TCA 72 bp | GGCATGGGTCCAGGGCGCCACTGGCGTGGGCCGCGGTaGAACCCAGAAGTCATTTTCGGGGGCCAGCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GMGPGRHWRGPR*NPEVIFGGQRH Trigger: GTGGCGCTGGCCCCCGAAAATGACTTCTGGGTTTCACCGCGGCCCACGCCAGTGGCGCCCTGGACCCATGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
||
| CDS CCA 72 bp | CTGGCAGGGTATCGTCCAGGTCCAGGTCAGGCTTTGTaGGGCGTCGTGTCCAGGCATGGGTCCAGGGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: LAGYRPGPGQAL*GVVSRHGSRAP Trigger: TGGCGCCCTGGACCCATGCCTGGACACGACGCCCCACAAAGCCTGACCTGGACCTGGACGATACCCTGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| CDS CAA 72 bp | CCTCTGGCAGGGTATCGTCCAGGTCCAGGTCAGGCTTaGTGGGGCGTCGTGTCCAGGCATGGGTCCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PLAGYRPGPGQA*WGVVSRHGSRA Trigger: CGCCCTGGACCCATGCCTGGACACGACGCCCCACAAAGCCTGACCTGGACCTGGACGATACCCTGCCAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| CDS CAA 90 bp | ACCACGAGACCCGCGGCCACCAGCACAGCTAGCGCCACTGCTGCGTaGAAAGCCCATGCTGGACTGCTCAGGGACAGGCGACGTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: TTRPAATSTASATAA*KAHAGLLRDRRRDS Trigger: GCTGTCACGTCGCCTGTCCCTGAGCAGTCCAGCATGGGCTTTCAACGCAGCAGTGGCGCTAGCTGTGCTGGTGGCCGCGGGTCTCGTGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| CDS GCA 72 bp | TGCATCGCCGCCACCCGCAGTAGCCAGCGACAGGCGTaGCAGGCACTCGAGACAGAATACGTGACCGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: CIAATRSSQRQA*QALETEYVTAV Trigger: GACTGCGGTCACGTATTCTGTCTCGAGTGCCTGGCACGCCTGTCGCTGGCTACTGCGGGTGGCGGCGATGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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| CDS TCA 72 bp | CAGGCGTTTAGGCAGCTTGAAAATGCCGTCGAAGGGTaGCACGCAGATAAGACATTCCATGGGGGATGTAGG | + |
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Preference number: 6 (lower is better) Translates to: QAFRQLENAVEG*HADKTFHGGCR Trigger: CCTACATCCCCCATGGAATGTCTTATCTGCGTGTCACCCTTCGACGGCATTTTCAAGCTGCCTAAACGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045870.5 |
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