Pregenerated sensors for RNF224 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089953Ensembl transcript IDs: ENSMUST00000091318.5, ENSMUST00000205192.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGAGACAAGAGAGAAGCCCTTTGCACCAGGTGGGCGTGGAAGATaGATTTCCTCAGGTGGCCTGGGAATGCACGGAGGCTCTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: RETREKPFAPGGRGR*ISSGGLGMHGGSEV Trigger: GACCTCAGAGCCTCCGTGCATTCCCAGGCCACCTGAGGAAATCCATCTTCCACGCCCACCTGGTGCAAAGGGCTTCTCTCTTGTCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR GCA 90 bp | ACATTCTACACCACCCAGGCAGGATGCTGTCATTCTGGCTGGGGCTaGCTAGAAACCCCACAAGAAAGTTGCCCTTCTCCGTCCTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: TFYTTQAGCCHSGWG*LETPQESCPSPSFW Trigger: CCAGAAGGACGGAGAAGGGCAACTTTCTTGTGGGGTTTCTAGGCAGCCCCAGCCAGAATGACAGCATCCTGCCTGGGTGGTGTAGAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR CCA 90 bp | CCTTTGCACCAGGTGGGCGTGGAAGATGGATTTCCTCAGGTGGCCTaGGAATGCACGGAGGCTCTGAGGTCAGCAGATTCAAATCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: PLHQVGVEDGFPQVA*ECTEALRSADSNLS Trigger: ACTCAGATTTGAATCTGCTGACCTCAGAGCCTCCGTGCATTCCCAGGCCACCTGAGGAAATCCATCTTCCACGCCCACCTGGTGCAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR GCA 90 bp | CACCAGGTGGGCGTGGAAGATGGATTTCCTCAGGTGGCCTGGGAATaGACGGAGGCTCTGAGGTCAGCAGATTCAAATCTGAGTTTAAGG | + |
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Preference number: 1 (lower is better) Translates to: HQVGVEDGFPQVAWE*TEALRSADSNLSLR Trigger: CCTTAAACTCAGATTTGAATCTGCTGACCTCAGAGCCTCCGTGCATTCCCAGGCCACCTGAGGAAATCCATCTTCCACGCCCACCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR TCA 90 bp | CTGGGTTGCGAACTCTGCAAACCTTATCATGTTCATCTCAGCACCTaGCAGAGAGACAAGAGAGAAGCCCTTTGCACCAGGTGGGCGTGG | + |
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Preference number: 1 (lower is better) Translates to: LGCELCKPYHVHLST*QRDKREALCTRWAW Trigger: CCACGCCCACCTGGTGCAAAGGGCTTCTCTCTTGTCTCTCTGTCAGGTGCTGAGATGAACATGATAAGGTTTGCAGAGTTCGCAACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR GCA 90 bp | CCCTTGTCAGAGCTAGCCCTCCATTGCACCCCTCTTTGGTACCTGTaGTGCAGACAGAGAACAGAGCTCAGTGAGCATTGTTGGATAGAC | + |
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Preference number: 1 (lower is better) Translates to: PLSELALHCTPLWYL*CRQRTELSEHCWID Trigger: GTCTATCCAACAATGCTCACTGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGGCTAGCTCTGACAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR GCA 90 bp | CCCTGCAAGTTCCAGCAGCCTTCTCTGCTCACTGCCCAACCTAGCTaGTTGAGGGACTTTGCCCAGGGAAGGAGTCTTCTTAATGTCTAT | + |
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Preference number: 1 (lower is better) Translates to: PCKFQQPSLLTAQPS*LRDFAQGRSLLNVY Trigger: ATAGACATTAAGAAGACTCCTTCCCTGGGCAAAGTCCCTCAAGCAGCTAGGTTGGGCAGTGAGCAGAGAAGGCTGCTGGAACTTGCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR GCA 90 bp | TGCTGTCATTCTGGCTGGGGCTGCCTAGAAACCCCACAAGAAAGTTaGCCTTCTCCGTCCTTCTGGGTTGCGAACTCTGCAAACCTTATC | + |
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Preference number: 1 (lower is better) Translates to: CCHSGWGCLETPQES*PSPSFWVANSANLI Trigger: GATAAGGTTTGCAGAGTTCGCAACCCAGAAGGACGGAGAAGGGCAACTTTCTTGTGGGGTTTCTAGGCAGCCCCAGCCAGAATGACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR CCA 90 bp | AGTCAAGACCCCTTGTCAGAGCTAGCCCTCCATTGCACCCCTCTTTaGTACCTGTGCTGCAGACAGAGAACAGAGCTCAGTGAGCATTGT | + |
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Preference number: 1 (lower is better) Translates to: SQDPLSELALHCTPL*YLCCRQRTELSEHC Trigger: ACAATGCTCACTGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGGCTAGCTCTGACAAGGGGTCTTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR CCA 90 bp | CATTTAATGGACATTCTACACCACCCAGGCAGGATGCTGTCATTCTaGCTGGGGCTGCCTAGAAACCCCACAAGAAAGTTGCCCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: HLMDILHHPGRMLSF*LGLPRNPTRKLPFS Trigger: GGAGAAGGGCAACTTTCTTGTGGGGTTTCTAGGCAGCCCCAGCCAGAATGACAGCATCCTGCCTGGGTGGTGTAGAATGTCCATTAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR GCA 90 bp | TTGTCAGAGCTAGCCCTCCATTGCACCCCTCTTTGGTACCTGTGCTaGAGACAGAGAACAGAGCTCAGTGAGCATTGTTGGATAGACAGT | + |
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Preference number: 1 (lower is better) Translates to: LSELALHCTPLWYLC*RQRTELSEHCWIDS Trigger: ACTGTCTATCCAACAATGCTCACTGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGGCTAGCTCTGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR CCA 90 bp | GGCTGCCTAGAAACCCCACAAGAAAGTTGCCCTTCTCCGTCCTTCTaGGTTGCGAACTCTGCAAACCTTATCATGTTCATCTCAGCACCT | + |
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Preference number: 1 (lower is better) Translates to: GCLETPQESCPSPSF*VANSANLIMFISAP Trigger: AGGTGCTGAGATGAACATGATAAGGTTTGCAGAGTTCGCAACCCAGAAGGACGGAGAAGGGCAACTTTCTTGTGGGGTTTCTAGGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR TCA 90 bp | CAGAGAACAGAGCTCAGTGAGCATTGTTGGATAGACAGTAACACATaGGACTCCAGGAATAGAGGAGGCAACTTGCCCTCGCTCCTGATT | + |
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Preference number: 1 (lower is better) Translates to: QRTELSEHCWIDSNT*DSRNRGGNLPSLLI Trigger: AATCAGGAGCGAGGGCAAGTTGCCTCCTCTATTCCTGGAGTCTCATGTGTTACTGTCTATCCAACAATGCTCACTGAGCTCTGTTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR TCA 90 bp | GAGTATCTTTTCCCAGTTGAGCACTGTCCTGTCTGCACATGCATGTaGAATGTCCCTTTTTGTGGATCAGGCCCTTTCCAGACCTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: EYLFPVEHCPVCTCM*NVPFCGSGPFQTLG Trigger: TCCCAAGGTCTGGAAAGGGCCTGATCCACAAAAAGGGACATTTCACATGCATGTGCAGACAGGACAGTGCTCAACTGGGAAAAGATACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGGCTCCTCCCAGGGCCTCCTGAATACAGCCTTTCTAGCAGGATGGAAGCATACACCCATAGCCTaGCCCTGCCCAGGCCCATAC | + |
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Preference number: 2 (lower is better) Translates to: PGGSSQGLLNTAFLAGWKHTPIA*PCPGPY Trigger: GTATGGGCCTGGGCAGGGCCAGGCTATGGGTGTATG...CTTCCATCCTGCTAGAAAGGCTGTATTCAGGAGGCCCTGGGAGGAGCCTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCATTGCACCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCTCACCCATAGCCTGGCCCTaGCCAGGCCCATACACTCAC | + |
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Preference number: 2 (lower is better) Translates to: PSIAPLFGTCAADREQSSPIAWP*PGPYTH Trigger: GTGAGTGTATGGGCCTGGGCAGGGCCAGGCTATGGG...TGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR CAA 90 bp | ATAGCCTGGCCCTGCCCAGGCCCATACACTCACCCCCACAGACTCTaGGGAGCCATTCTCTCAGCTGAGTCCTGGGTTTACAAGAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: IAWPCPGPYTHPHRL*GAILSAESWVYKRH Trigger: ATGCCTCTTGTAAACCCAGGACTCAGCTGAGAGAATGGCTCCCAAGAGTCTGTGGGGGTGAGTGTATGGGCCTGGGCAGGGCCAGGCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTCCAGGACTTGGAGTCTCTATCTGCATGGAAAGAGGTGGGCAGAGCTCATTTTCCAGACCTTGGGATaGGGACTAGGCCCTCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GSRTWSLYLHGKRWAELIFQTLG*GLGPPL Trigger: CAGGGGAGGGCCTAGTCCTCATCCCAAGGTCTGGAA...AATGAGCTCTGCCCACCTCTTTCCATGCAGATAGAGACTCCAAGTCCTGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCTCAGTGAGCATTGTTCCCATAGCCTGGCCCTaGCCAGGCCCATACACTCAC | + |
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Preference number: 2 (lower is better) Translates to: PLFGTCAADREQSSVSIVPIAWP*PGPYTH Trigger: GTGAGTGTATGGGCCTGGGCAGGGCCAGGCTATGGG...AACAATGCTCACTGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR GCA 90 bp | TATTCAGCAAATTCTCTAGCCTCCCATCCACTGCCCAGGAGGCTCCTCCCAGGGTTCCCCAGCCTAGTGTaGAGTCTTATGGCACCATGG | + |
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Preference number: 2 (lower is better) Translates to: YSANSLASHPLPRRLLPGFPSLV*SLMAPW Trigger: CCATGGTGCCATAAGACTGCACACTAGGCTGGGGAA...CCCTGGGAGGAGCCTCCTGGGCAGTGGATGGGAGGCTAGAGAATTTGCTGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR CAA 90 bp | GCAGTGAGATCTCAGTCAAGACCCCTTGTCAGAGCTAGCCCTCCATaGCACCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: AVRSQSRPLVRASPP*HPSLVPVLQTENRA Trigger: AGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGGCTAGCTCTGACAAGGGGTCTTGACTGAGATCTCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGAAGACCTACTCTGATGCCAGCCACTTACATACACCCATAGCCTGGCCCTTCCCCAGCCTAGTGTaGAGTCTTATGGCACCATGG | + |
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Preference number: 2 (lower is better) Translates to: ERKTYSDASHLHTPIAWPFPSLV*SLMAPW Trigger: CCATGGTGCCATAAGACTGCACACTAGGCTGGGGAA...GGGCCAGGCTATGGGTGTATGTAAGTGGCTGGCATCAGAGTAGGTCTTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR GCA 90 bp | TATTCAGCAAATTCTCTAGCCTCCCATCCACTGCCCAGGAGGCTCCTCCCAGGGCTTTGGTACCTGTGCTaGAGACAGAGAACAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: YSANSLASHPLPRRLLPGLWYLC*RQRTEL Trigger: GAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAG...CCCTGGGAGGAGCCTCCTGGGCAGTGGATGGGAGGCTAGAGAATTTGCTGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTCCAGGACTTGGAGTCTCTATCTGCATGGAAAGAGGTGGGCAGAGCTCATTTCCAGCAGCCTTCTCTaGTCACTGCCCAACCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: GSRTWSLYLHGKRWAELISSSLL*SLPNLA Trigger: AGCTAGGTTGGGCAGTGAGCAGAGAAGGCTGCTGGA...AATGAGCTCTGCCCACCTCTTTCCATGCAGATAGAGACTCCAAGTCCTGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGAAGACCTACTCTGATGCCAGCCACTTACATACACCCATAGCCTGGCCCTCTAGGCCAGTAGAATaGGAGTTCCCCAGCCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: ERKTYSDASHLHTPIAWPSRPVE*EFPSLV Trigger: CACTAGGCTGGGGAACTCCCATTCTACTGGCCTAGA...GGGCCAGGCTATGGGTGTATGTAAGTGGCTGGCATCAGAGTAGGTCTTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCATTGCACCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCTCAAGCCATTCTCTCAGCTaGGTCCTGGGTTTACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: PSIAPLFGTCAADREQSSSHSLS*VLGLQE Trigger: CTCTTGTAAACCCAGGACTCAGCTGAGAGAATGGCT...TGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGAGTCTCTATCTGCATGGAAAGAGGTGGGCAGAGCTCATTGCCCGACCCGTATCTTTTCCCAGTTaGGCACTGTCCTGTCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: TWSLYLHGKRWAELIARPVSFPS*ALSCLH Trigger: GTGCAGACAGGACAGTGCTCAACTGGGAAAAGATAC...GGGTCGGGCAATGAGCTCTGCCCACCTCTTTCCATGCAGATAGAGACTCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGGTGGCCTGGGAATGCACGGAGGCTCTGAGGTCAGCAGATTCAAATCTGGTCTGCACATGCATGTaGAATGTCCCTTTTTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: PQVAWECTEALRSADSNLVCTCM*NVPFCG Trigger: TCCACAAAAAGGGACATTTCACATGCATGTGCAGAC...CAGATTTGAATCTGCTGACCTCAGAGCCTCCGTGCATTCCCAGGCCACCTGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR-3UTR TCA 90 bp | AATGTCTATTCAGCAAATTCTCTAGCCTCCCATCCACTGCCCAGGAGGCTCCTCGAGGAAGACCTACTCTaGTGCCAGCCACTTACATAC | + |
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Preference number: 2 (lower is better) Translates to: NVYSANSLASHPLPRRLLEEDLL*CQPLTY Trigger: GTATGTAAGTGGCTGGCATCAGAGTAGGTCTTCCTC...GAGGAGCCTCCTGGGCAGTGGATGGGAGGCTAGAGAATTTGCTGAATAGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR GCA 90 bp | GCATTGGATACATTTAATGGACATTCTACACCACCCAGGCAGGATGCTGTCATTCAGGTGGCCTGGGAATaGACGGAGGCTCTGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ALDTFNGHSTPPRQDAVIQVAWE*TEALRS Trigger: TGACCTCAGAGCCTCCGTGCATTCCCAGGCCACCTG...AATGACAGCATCCTGCCTGGGTGGTGTAGAATGTCCATTAAATGTATCCAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTAATGTCTATTCAGCAAATTCTCTAGCCTCCCATCCACTGCCCAGGAGGGCAGAGTTTCCTTTGTaGGGGTGGGGATGGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LLNVYSANSLASHPLPRRAEFPL*GWGWPE Trigger: TTCTGGCCATCCCCACCCCCACAAAGGAAACTCTGC...CCTCCTGGGCAGTGGATGGGAGGCTAGAGAATTTGCTGAATAGACATTAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTGTCATTCTGGCTGGGGCTGCCTAGAAACCCCACAAGAAAGTTGCCCTTCAAATGTCCCTTTTTGTaGATCAGGCCCTTTCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: MLSFWLGLPRNPTRKLPFKCPFL*IRPFPD Trigger: GTCTGGAAAGGGCCTGATCCACAAAAAGGGACATTT...GAAGGGCAACTTTCTTGTGGGGTTTCTAGGCAGCCCCAGCCAGAATGACAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR CAA 90 bp | GGCCTCCTGAATACAGCCTTTCTAGCAGGATGGAAGCTTACAGCTTaGGTCTTGGGGTTGTCAGTCATCTGTAGCCTCTATCACCTACTA | + |
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Preference number: 2 (lower is better) Translates to: GLLNTAFLAGWKLTA*VLGLSVICSLYHLL Trigger: TAGTAGGTGATAGAGGCTACAGATGACTGACAACCCCAAGACCAAAGCTGTAAGCTTCCATCCTGCTAGAAAGGCTGTATTCAGGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTAATGTCTATTCAGCAAATTCTCTAGCCTCCCATCCACTGCCCAGGAGGAGCCATTCTCTCAGCTaGGTCCTGGGTTTACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LLNVYSANSLASHPLPRRSHSLS*VLGLQE Trigger: CTCTTGTAAACCCAGGACTCAGCTGAGAGAATGGCT...CCTCCTGGGCAGTGGATGGGAGGCTAGAGAATTTGCTGAATAGACATTAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR TCA 90 bp | TACAGCCTTTCTAGCAGGATGGAAGCTTACAGCTTTGGTCTTGGGGTTGTCAGTGAGGAAGACCTACTCTaGTGCCAGCCACTTACATAC | + |
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Preference number: 2 (lower is better) Translates to: YSLSSRMEAYSFGLGVVSEEDLL*CQPLTY Trigger: GTATGTAAGTGGCTGGCATCAGAGTAGGTCTTCCTC...ACTGACAACCCCAAGACCAAAGCTGTAAGCTTCCATCCTGCTAGAAAGGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTGAGGGACTTTGCCCAGGGAAGGAGTCTTCTTAATGTCTATTCAGCAAATGCAGAGTTTCCTTTGTaGGGGTGGGGATGGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: CLRDFAQGRSLLNVYSANAEFPL*GWGWPE Trigger: TTCTGGCCATCCCCACCCCCACAAAGGAAACTCTGC...ATTTGCTGAATAGACATTAAGAAGACTCCTTCCCTGGGCAAAGTCCCTCAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR CAA 90 bp | CTGAATACAGCCTTTCTAGCAGGATGGAAGCTTACAGCTTTGGTCTaGGGGTTGTCAGTCATCTGTAGCCTCTATCACCTACTAAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LNTAFLAGWKLTALV*GLSVICSLYHLLKG Trigger: ACCCTTTAGTAGGTGATAGAGGCTACAGATGACTGACAACCCCAAGACCAAAGCTGTAAGCTTCCATCCTGCTAGAAAGGCTGTATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR CCA 90 bp | AATACAGCCTTTCTAGCAGGATGGAAGCTTACAGCTTTGGTCTTGGGGTTGTCACCTGATTCATACCTCTaGATGTTTATAGAGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: NTAFLAGWKLTALVLGLSPDSYL*MFIERK Trigger: CTTCCTCTCTATAAACATCCAGAGGTATGAATCAGG...TGACAACCCCAAGACCAAAGCTGTAAGCTTCCATCCTGCTAGAAAGGCTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR CCA 72 bp | GGGCTTTCTGGGGAGCCCAGCAGGGGGTCCAGGACTTaGAGTCTCTATCTGCATGGAAAGAGGTGGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: GLSGEPSRGSRT*SLYLHGKRWAE Trigger: CTCTGCCCACCTCTTTCCATGCAGATAGAGACTCCAAGTCCTGGACCCCCTGCTGGGCTCCCCAGAAAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR CCA 72 bp | AGAGAGAAGCCCTTTGCACCAGGTGGGCGTGGAAGATaGATTTCCTCAGGTGGCCTGGGAATGCACGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: REKPFAPGGRGR*ISSGGLGMHGG Trigger: GCCTCCGTGCATTCCCAGGCCACCTGAGGAAATCCATCTTCCACGCCCACCTGGTGCAAAGGGCTTCTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR-3UTR CAA 90 bp | CCAGGAGGCTCCTCCCAGGGCCTCCTGAATACAGCCTTTCTAGCAGGATGGAAGCACCCCCACAGACTCTaGGGAGCCATTCTCTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: PGGSSQGLLNTAFLAGWKHPHRL*GAILSA Trigger: AGCTGAGAGAATGGCTCCCAAGAGTCTGTGGGGGTG...CTTCCATCCTGCTAGAAAGGCTGTATTCAGGAGGCCCTGGGAGGAGCCTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCAGGTGGCCTGGGAATGCACGGAGGCTCTGAGGTCAGCAGATTCAAATCTGCACCCCCACAGACTCTaGGGAGCCATTCTCTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: PQVAWECTEALRSADSNLHPHRL*GAILSA Trigger: AGCTGAGAGAATGGCTCCCAAGAGTCTGTGGGGGTG...CAGATTTGAATCTGCTGACCTCAGAGCCTCCGTGCATTCCCAGGCCACCTGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR GCA 72 bp | ACCACCCAGGCAGGATGCTGTCATTCTGGCTGGGGCTaGCTAGAAACCCCACAAGAAAGTTGCCCTTCTCCG | + |
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Preference number: 3 (lower is better) Translates to: TTQAGCCHSGWG*LETPQESCPSP Trigger: CGGAGAAGGGCAACTTTCTTGTGGGGTTTCTAGGCAGCCCCAGCCAGAATGACAGCATCCTGCCTGGGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR CCA 72 bp | CAGCAGGGGGTCCAGGACTTGGAGTCTCTATCTGCATaGAAAGAGGTGGGCAGAGCTCATTGCCCGACCCTT | + |
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Preference number: 3 (lower is better) Translates to: QQGVQDLESLSA*KEVGRAHCPTL Trigger: AAGGGTCGGGCAATGAGCTCTGCCCACCTCTTTCCATGCAGATAGAGACTCCAAGTCCTGGACCCCCTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR CCA 72 bp | CAGGTGGGCGTGGAAGATGGATTTCCTCAGGTGGCCTaGGAATGCACGGAGGCTCTGAGGTCAGCAGATTCA | + |
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Preference number: 3 (lower is better) Translates to: QVGVEDGFPQVA*ECTEALRSADS Trigger: TGAATCTGCTGACCTCAGAGCCTCCGTGCATTCCCAGGCCACCTGAGGAAATCCATCTTCCACGCCCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR-3UTR CAA 90 bp | CCAGGAGGCTCCTCCCAGGGCCTCCTGAATACAGCCTTTCTAGCAGGATGGAAGAATAGAGGAGGCAACTaGCCCTCGCTCCTGATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PGGSSQGLLNTAFLAGWKNRGGN*PSLLIH Trigger: ATGAATCAGGAGCGAGGGCAAGTTGCCTCCTCTATT...CTTCCATCCTGCTAGAAAGGCTGTATTCAGGAGGCCCTGGGAGGAGCCTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGATGCTGTCATTCTGGCTGGGGCTGCCTAGAAACCCCACAAGAAAGTTGCCCCTCAGTCAAGACCCCTaGTCAGAGCTAGCCCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RMLSFWLGLPRNPTRKLPLSQDP*SELALH Trigger: ATGGAGGGCTAGCTCTGACAAGGGGTCTTGACTGAG...GGGCAACTTTCTTGTGGGGTTTCTAGGCAGCCCCAGCCAGAATGACAGCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| 3UTR GCA 72 bp | TTCCAGCAGCCTTCTCTGCTCACTGCCCAACCTAGCTaGTTGAGGGACTTTGCCCAGGGAAGGAGTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FQQPSLLTAQPS*LRDFAQGRSLL Trigger: AAGAAGACTCCTTCCCTGGGCAAAGTCCCTCAAGCAGCTAGGTTGGGCAGTGAGCAGAGAAGGCTGCTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| 3UTR GCA 72 bp | GGCGTGGAAGATGGATTTCCTCAGGTGGCCTGGGAATaGACGGAGGCTCTGAGGTCAGCAGATTCAAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: GVEDGFPQVAWE*TEALRSADSNL Trigger: CAGATTTGAATCTGCTGACCTCAGAGCCTCCGTGCATTCCCAGGCCACCTGAGGAAATCCATCTTCCACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| 3UTR CCA 72 bp | CCCTTGTCAGAGCTAGCCCTCCATTGCACCCCTCTTTaGTACCTGTGCTGCAGACAGAGAACAGAGCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PLSELALHCTPL*YLCCRQRTELS Trigger: ACTGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGGCTAGCTCTGACAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR CCA 72 bp | AGAGACAAGAGAGAAGCCCTTTGCACCAGGTGGGCGTaGAAGATGGATTTCCTCAGGTGGCCTGGGAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: RDKREALCTRWA*KMDFLRWPGNA Trigger: TGCATTCCCAGGCCACCTGAGGAAATCCATCTTCCACGCCCACCTGGTGCAAAGGGCTTCTCTCTTGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| 3UTR GCA 72 bp | TCTAGGCCAGTAGAATGGGAGTTCCCCAGCCTAGTGTaGAGTCTTATGGCACCATGGCCATTGACTCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: SRPVEWEFPSLV*SLMAPWPLTLT Trigger: GGTCAGAGTCAATGGCCATGGTGCCATAAGACTGCACACTAGGCTGGGGAACTCCCATTCTACTGGCCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR GCA 72 bp | GAGCTAGCCCTCCATTGCACCCCTCTTTGGTACCTGTaGTGCAGACAGAGAACAGAGCTCAGTGAGCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: ELALHCTPLWYL*CRQRTELSEHC Trigger: ACAATGCTCACTGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGGCTAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCATTGCACCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCTCAATGGCACCATGGCCATaGACTCTGACCTTAGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: PSIAPLFGTCAADREQSSMAPWP*TLTLGY Trigger: ATAGCCTAAGGTCAGAGTCAATGGCCATGGTGCCAT...TGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCATTGCACCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCTCAATAGACAGCAGGATGTaGGCTAGCCAGAGTCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: PSIAPLFGTCAADREQSSIDSRM*ASQSQT Trigger: AGTCTGACTCTGGCTAGCCAACATCCTGCTGTCTAT...TGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTGGAGTCTCTATCTGCATGGAAAGAGGTGGGCAGAGCTCATTGCCCGACCCTGGAAGCTTACAGCTTaGGTCTTGGGGTTGTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: TWSLYLHGKRWAELIARPWKLTA*VLGLSV Trigger: GACTGACAACCCCAAGACCAAAGCTGTAAGCTTCCA...GGGTCGGGCAATGAGCTCTGCCCACCTCTTTCCATGCAGATAGAGACTCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| 3UTR CCA 72 bp | CACAGACTCTTGGGAGCCATTCTCTCAGCTGAGTCCTaGGTTTACAAGAGGCATAGACAGCAGGATGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HRLLGAILSAES*VYKRHRQQDVG Trigger: GCCAACATCCTGCTGTCTATGCCTCTTGTAAACCCAGGACTCAGCTGAGAGAATGGCTCCCAAGAGTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGATGCTGTCATTCTGGCTGGGGCTGCCTAGAAACCCCACAAGAAAGTTGCCCAGTATCTTTTCCCAGTaGAGCACTGTCCTGTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RMLSFWLGLPRNPTRKLPSIFSQ*STVLSA Trigger: TGCAGACAGGACAGTGCTCAACTGGGAAAAGATACT...GGGCAACTTTCTTGTGGGGTTTCTAGGCAGCCCCAGCCAGAATGACAGCATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| 3UTR-3UTR CAA 90 bp | AATGTCTATTCAGCAAATTCTCTAGCCTCCCATCCACTGCCCAGGAGGCTCCTCAATAGAGGAGGCAACTaGCCCTCGCTCCTGATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: NVYSANSLASHPLPRRLLNRGGN*PSLLIH Trigger: ATGAATCAGGAGCGAGGGCAAGTTGCCTCCTCTATT...GAGGAGCCTCCTGGGCAGTGGATGGGAGGCTAGAGAATTTGCTGAATAGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGGAAGACCTACTCTGATGCCAGCCACTTACATACACCCATAGCCTGGCCCGTGACACCACTATATTaGGTTGTGTACAGTCATAGG | + |
|
Preference number: 3 (lower is better) Translates to: ERKTYSDASHLHTPIAWPVTPLY*VVYSHR Trigger: CCTATGACTGTACACAACCAAATATAGTGGTGTCAC...GGGCCAGGCTATGGGTGTATGTAAGTGGCTGGCATCAGAGTAGGTCTTCCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR TCA 72 bp | GAGCTCAGTGAGCATTGTTGGATAGACAGTAACACATaGGACTCCAGGAATAGAGGAGGCAACTTGCCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: ELSEHCWIDSNT*DSRNRGGNLPS Trigger: CGAGGGCAAGTTGCCTCCTCTATTCCTGGAGTCTCATGTGTTACTGTCTATCCAACAATGCTCACTGAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR TCA 72 bp | TTCCCAGTTGAGCACTGTCCTGTCTGCACATGCATGTaGAATGTCCCTTTTTGTGGATCAGGCCCTTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FPVEHCPVCTCM*NVPFCGSGPFQ Trigger: CTGGAAAGGGCCTGATCCACAAAAAGGGACATTTCACATGCATGTGCAGACAGGACAGTGCTCAACTGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| 3UTR GCA 72 bp | CCCACAAGAAAGTTGCCCTTCTCCGTCCTTCTGGGTTaGGAACTCTGCAAACCTTATCATGTTCATCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PTRKLPFSVLLG*ELCKPYHVHLS Trigger: GCTGAGATGAACATGATAAGGTTTGCAGAGTTCGCAACCCAGAAGGACGGAGAAGGGCAACTTTCTTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| 3UTR CCA 72 bp | TATGGCACCATGGCCATTGACTCTGACCTTAGGCTATaGCTCGAAATGTTCCTGGTCAAGGTGACACCACTA | + |
|
Preference number: 3 (lower is better) Translates to: YGTMAIDSDLRL*LEMFLVKVTPL Trigger: TAGTGGTGTCACCTTGACCAGGAACATTTCGAGCCATAGCCTAAGGTCAGAGTCAATGGCCATGGTGCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR CCA 72 bp | AGGAGGCAACTTGCCCTCGCTCCTGATTCATACCTCTaGATGTTTATAGAGAGGAAGACCTACTCTGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: RRQLALAPDSYL*MFIERKTYSDA Trigger: GGCATCAGAGTAGGTCTTCCTCTCTATAAACATCCAGAGGTATGAATCAGGAGCGAGGGCAAGTTGCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR TCA 72 bp | ATACCTCTGGATGTTTATAGAGAGGAAGACCTACTCTaGTGCCAGCCACTTACATACACCCATAGCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: IPLDVYREEDLL*CQPLTYTHSLA Trigger: GGCCAGGCTATGGGTGTATGTAAGTGGCTGGCATCAGAGTAGGTCTTCCTCTCTATAAACATCCAGAGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR TCA 72 bp | GAACTCTGCAAACCTTATCATGTTCATCTCAGCACCTaGCAGAGAGACAAGAGAGAAGCCCTTTGCACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ELCKPYHVHLST*QRDKREALCTR Trigger: CCTGGTGCAAAGGGCTTCTCTCTTGTCTCTCTGTCAGGTGCTGAGATGAACATGATAAGGTTTGCAGAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| 3UTR CCA 72 bp | GAAACCCCACAAGAAAGTTGCCCTTCTCCGTCCTTCTaGGTTGCGAACTCTGCAAACCTTATCATGTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: ETPQESCPSPSF*VANSANLIMFI Trigger: GATGAACATGATAAGGTTTGCAGAGTTCGCAACCCAGAAGGACGGAGAAGGGCAACTTTCTTGTGGGGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGCAGATTCAAATCTGAGTTTAAGGGTGGGGCCAGATCTAGAAGGGCTTTCAGCAGGCTGTTCTGTTaGCATTGTGTACGATCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSRFKSEFKGGARSRRAFSRLFC*HCVRSK Trigger: CTTGGATCGTACACAATGCAAACAGAACAGCCTGCT...GAAAGCCCTTCTAGATCTGGCCCCACCCTTAAACTCAGATTTGAATCTGCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGGATGGAAGCTTACAGCTTTGGTCTTGGGGTTGTCAGTCATCTGTAGCCTCTGTGACACCACTATATTaGGTTGTGTACAGTCATAGG | + |
|
Preference number: 3 (lower is better) Translates to: QDGSLQLWSWGCQSSVASVTPLY*VVYSHR Trigger: CCTATGACTGTACACAACCAAATATAGTGGTGTCAC...AGAGGCTACAGATGACTGACAACCCCAAGACCAAAGCTGTAAGCTTCCATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGAAATGTTCCTGGTCAAGGTGACACCACTATATTTGGTTGTGTACAGTCATAGCAGGCTGTTCTGTTaGCATTGTGTACGATCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LEMFLVKVTPLYLVVYSHSRLFC*HCVRSK Trigger: CTTGGATCGTACACAATGCAAACAGAACAGCCTGCT...ATGACTGTACACAACCAAATATAGTGGTGTCACCTTGACCAGGAACATTTCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| CDS-3UTR CCA 90 bp | TATTCAGCAAATTCTCTAGCCTCCCATCCACTGCCCAGGAGGCTCCTCCCAGGGGTTGGGGGCCCAAGGTaGGGTAGAGTCCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSANSLASHPLPRRLLPGVGGPR*GRVQLA Trigger: AGCCAGCTGGACTCTACCCCACCTTGGGCCCCCAAC...CCCTGGGAGGAGCCTCCTGGGCAGTGGATGGGAGGCTAGAGAATTTGCTGAATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR CAA 72 bp | AGGGCTTTCTGGGGAGCCCAGCAGGGGGTCCAGGACTaGGAGTCTCTATCTGCATGGAAAGAGGTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAFWGAQQGVQD*ESLSAWKEVGR Trigger: TCTGCCCACCTCTTTCCATGCAGATAGAGACTCCAAGTCCTGGACCCCCTGCTGGGCTCCCCAGAAAGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| CDS-3UTR CCA 90 bp | TTGTGGATCAGGCCCTTTCCAGACCTTGGGATGAGGACTAGGCCCTCCCCTGCAACTTTGTCGGCACTGTaGACAGGGGATCCAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWIRPFPDLGMRTRPSPATLSAL*TGDPVL Trigger: CAACACTGGATCCCCTGTCCACAGTGCCGACAAAGT...TGCAGGGGAGGGCCTAGTCCTCATCCCAAGGTCTGGAAAGGGCCTGATCCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| CDS-3UTR CCA 90 bp | CCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCTCAGTGAGCATTGTTGTTGGGGGCCCAAGGTaGGGTAGAGTCCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLFGTCAADREQSSVSIVVGGPR*GRVQLA Trigger: AGCCAGCTGGACTCTACCCCACCTTGGGCCCCCAAC...AACAATGCTCACTGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR CAA 72 bp | CCCCTTGTCAGAGCTAGCCCTCCATTGCACCCCTCTTaGGTACCTGTGCTGCAGACAGAGAACAGAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLVRASPPLHPS*VPVLQTENRAQ Trigger: CTGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGGCTAGCTCTGACAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR CAA 72 bp | TTCTGGCTGGGGCTGCCTAGAAACCCCACAAGAAAGTaGCCCTTCTCCGTCCTTCTGGGTTGCGAACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FWLGLPRNPTRK*PFSVLLGCELC Trigger: GCAGAGTTCGCAACCCAGAAGGACGGAGAAGGGCAACTTTCTTGTGGGGTTTCTAGGCAGCCCCAGCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| CDS-3UTR TCA 90 bp | TATTCAGCAAATTCTCTAGCCTCCCATCCACTGCCCAGGAGGCTCCTCCCAGGGAGGCAGAGTAGCAGATaGTGCAGTCATTCCGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSANSLASHPLPRRLLPGRQSSR*CSHSVR Trigger: CCTCACGGAATGACTGCATCATCTGCTACTCTGCCT...CCCTGGGAGGAGCCTCCTGGGCAGTGGATGGGAGGCTAGAGAATTTGCTGAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGGAAGACCTACTCTGATGCCAGCCACTTACATACACCCATAGCCTGGCCCGTTCCCGTTCAGCTTTaGCTGCCAAGAAGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERKTYSDASHLHTPIAWPVPVQL*LPRRQP Trigger: TGGCTGCCTTCTTGGCAGTCAAAGCTGAACGGGAAC...GGGCCAGGCTATGGGTGTATGTAAGTGGCTGGCATCAGAGTAGGTCTTCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCCATTGCACCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCTCATATCCAGCCGCTGCATaGATGCCTGGCAGAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSIAPLFGTCAADREQSSYPAAA*MPGRRC Trigger: ACACCTTCTGCCAGGCATGCATGCAGCGGCTGGATA...TGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| CDS-3UTR GCA 90 bp | TACAGCCTTTCTAGCAGGATGGAAGCTTACAGCTTTGGTCTTGGGGTTGTCAGTCAGCCGCTGCATGCATaGCTGGCAGAAGGTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YSLSSRMEAYSFGLGVVSQPLHA*LAEGVA Trigger: GGCCACACCTTCTGCCAGGCATGCATGCAGCGGCTG...ACTGACAACCCCAAGACCAAAGCTGTAAGCTTCCATCCTGCTAGAAAGGCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCCATTGCACCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCTCAACTTTGTCGGCACTGTaGACAGGGGATCCAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSIAPLFGTCAADREQSSTLSAL*TGDPVL Trigger: CAACACTGGATCCCCTGTCCACAGTGCCGACAAAGT...TGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGCTCCTCCCAGGGCCTCCTGAATACAGCCTTTCTAGCAGGATGGAAGGGGGGACAGAGGACCTaGGTTCTATTTTTGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGGSSQGLLNTAFLAGWKGGQRT*VLFLMV Trigger: AACCATCAAAAATAGAACCCAGGTCCTCTGTCCCCC...CTTCCATCCTGCTAGAAAGGCTGTATTCAGGAGGCCCTGGGAGGAGCCTCCTGG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCAGACAGAGAACAGAGCTCAGTGAGCATTGTTGGATAGACAGTAACACACAGCCGCTGCATGCATaGCTGGCAGAAGGTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CCRQRTELSEHCWIDSNTQPLHA*LAEGVA Trigger: GGCCACACCTTCTGCCAGGCATGCATGCAGCGGCTG...TGTGTTACTGTCTATCCAACAATGCTCACTGAGCTCTGTTCTCTGTCTGCAGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| CDS-3UTR GCA 90 bp | AATGTCTATTCAGCAAATTCTCTAGCCTCCCATCCACTGCCCAGGAGGCTCCTCTATCCAGCCGCTGCATaGATGCCTGGCAGAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NVYSANSLASHPLPRRLLYPAAA*MPGRRC Trigger: ACACCTTCTGCCAGGCATGCATGCAGCGGCTGGATA...GAGGAGCCTCCTGGGCAGTGGATGGGAGGCTAGAGAATTTGCTGAATAGACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTGTCATTCTGGCTGGGGCTGCCTAGAAACCCCACAAGAAAGTTGCCCTTCTCGAGGCAAGTGTACTaGGAGGTCATAGGCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MLSFWLGLPRNPTRKLPFSRQVY*EVIGRV Trigger: TACTCTGCCTATGACCTCTCAGTACACTTGCCTCGA...GAAGGGCAACTTTCTTGTGGGGTTTCTAGGCAGCCCCAGCCAGAATGACAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| CDS-3UTR CCA 90 bp | TACAGCCTTTCTAGCAGGATGGAAGCTTACAGCTTTGGTCTTGGGGTTGTCAGTGGGGTAGAGTCCAGCTaGCTGCTGAGTGATGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSLSSRMEAYSFGLGVVSGVESS*LLSDGS Trigger: ACTACCATCACTCAGCAGCCAGCTGGACTCTACCCC...ACTGACAACCCCAAGACCAAAGCTGTAAGCTTCCATCCTGCTAGAAAGGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR CAA 72 bp | CTGTCCTGTCTGCACATGCATGTGAAATGTCCCTTTTaGTGGATCAGGCCCTTTCCAGACCTTGGGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSCLHMHVKCPF*WIRPFPDLGMR Trigger: CCTCATCCCAAGGTCTGGAAAGGGCCTGATCCACAAAAAGGGACATTTCACATGCATGTGCAGACAGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| CDS-3UTR CCA 90 bp | CCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCTCAGTGAGCATTGTTGGGGGACAGAGGACCTaGGTTCTATTTTTGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLFGTCAADREQSSVSIVGGQRT*VLFLMV Trigger: AACCATCAAAAATAGAACCCAGGTCCTCTGTCCCCC...AACAATGCTCACTGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| 3UTR CAA 72 bp | GTCTCTATCTGCATGGAAAGAGGTGGGCAGAGCTCATaGCCCGACCCTTATCTGAGTATCTTTTCCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSICMERGGQSS*PDPYLSIFSQL Trigger: CAACTGGGAAAAGATACTCAGATAAGGGTCGGGCAATGAGCTCTGCCCACCTCTTTCCATGCAGATAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
||
| CDS-3UTR TCA 90 bp | GTGTACAGTCATAGGAGAGTTGTCTTGCTAGCAGGCTGTTCTGTTTGCATTGTGAGGCAGAGTAGCAGATaGTGCAGTCATTCCGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYSHRRVVLLAGCSVCIVRQSSR*CSHSVR Trigger: CCTCACGGAATGACTGCATCATCTGCTACTCTGCCT...CACAATGCAAACAGAACAGCCTGCTAGCAAGACAACTCTCCTATGACTGTACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTTAATGTCTATTCAGCAAATTCTCTAGCCTCCCATCCACTGCCCAGGAGGTCGAGGCAAGTGTACTaGGAGGTCATAGGCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLNVYSANSLASHPLPRRSRQVY*EVIGRV Trigger: TACTCTGCCTATGACCTCTCAGTACACTTGCCTCGA...CCTCCTGGGCAGTGGATGGGAGGCTAGAGAATTTGCTGAATAGACATTAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS-3UTR TCA 90 bp | GGCTCTGAGGTCAGCAGATTCAAATCTGAGTTTAAGGGTGGGGCCAGATCTAGACCTGGGTTCTATTTTTaGTGGTTCCCGTTCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GSEVSRFKSEFKGGARSRPGFYF*WFPFSF Trigger: AAAGCTGAACGGGAACCATCAAAAATAGAACCCAGG...TCTAGATCTGGCCCCACCCTTAAACTCAGATTTGAATCTGCTGACCTCAGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091318.5 |
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| 3UTR CAA 72 bp | CTAGCAGGATGGAAGCTTACAGCTTTGGTCTTGGGGTaGTCAGTCATCTGTAGCCTCTATCACCTACTAAAG | + |
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Preference number: 4 (lower is better) Translates to: LAGWKLTALVLG*SVICSLYHLLK Trigger: CTTTAGTAGGTGATAGAGGCTACAGATGACTGACAACCCCAAGACCAAAGCTGTAAGCTTCCATCCTGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR CAA 72 bp | AATACAGCCTTTCTAGCAGGATGGAAGCTTACAGCTTaGGTCTTGGGGTTGTCAGTCATCTGTAGCCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: NTAFLAGWKLTA*VLGLSVICSLY Trigger: ATAGAGGCTACAGATGACTGACAACCCCAAGACCAAAGCTGTAAGCTTCCATCCTGCTAGAAAGGCTGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR CAA 72 bp | CTCGAAATGTTCCTGGTCAAGGTGACACCACTATATTaGGTTGTGTACAGTCATAGGAGAGTTGTCTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: LEMFLVKVTPLY*VVYSHRRVVLL Trigger: TAGCAAGACAACTCTCCTATGACTGTACACAACCAAATATAGTGGTGTCACCTTGACCAGGAACATTTCGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| 3UTR CAA 72 bp | CTATATTTGGTTGTGTACAGTCATAGGAGAGTTGTCTaGCTAGCAGGCTGTTCTGTTTGCATTGTGTACGAT | + |
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Preference number: 4 (lower is better) Translates to: LYLVVYSHRRVV*LAGCSVCIVYD Trigger: ATCGTACACAATGCAAACAGAACAGCCTGCTAGCAAGACAACTCTCCTATGACTGTACACAACCAAATATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS-3UTR TCA 90 bp | TTTGCATTGTGTACGATCCAAGGTAGACAAACTACTAAGCAGAGTTTCCTTTGTCCTGGGTTCTATTTTTaGTGGTTCCCGTTCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: FALCTIQGRQTTKQSFLCPGFYF*WFPFSF Trigger: AAAGCTGAACGGGAACCATCAAAAATAGAACCCAGG...ACAAAGGAAACTCTGCTTAGTAGTTTGTCTACCTTGGATCGTACACAATGCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS CCA 90 bp | ACTTTGTCGGCACTGTGGACAGGGGATCCAGTGTTGTTCGTGGGCTaGCATATCCAGCCGCTGCATGCATGCCTGGCAGAAGGTGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: TLSALWTGDPVLFVG*HIQPLHACLAEGVA Trigger: GGCCACACCTTCTGCCAGGCATGCATGCAGCGGCTGGATATGCCAGCCCACGAACAACACTGGATCCCCTGTCCACAGTGCCGACAAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS CCA 90 bp | GGGGTACTTTGTCGGCACTGTGGACAGGGGATCCAGTGTTGTTCGTaGGCTGGCATATCCAGCCGCTGCATGCATGCCTGGCAGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: GVLCRHCGQGIQCCS*AGISSRCMHAWQKV Trigger: CACCTTCTGCCAGGCATGCATGCAGCGGCTGGATATGCCAGCCCACGAACAACACTGGATCCCCTGTCCACAGTGCCGACAAAGTACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS TCA 90 bp | GACGTCGAGGCAAGTGTACTGAGAGGTCATAGGCAGAGTAGCAGATaGTGCAGTCATTCCGTGAGGCTGTCAGGGCTGTCCCCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: DVEASVLRGHRQSSR*CSHSVRLSGLSPPP Trigger: TGGAGGAGGGGACAGCCCTGACAGCCTCACGGAATGACTGCATCATCTGCTACTCTGCCTATGACCTCTCAGTACACTTGCCTCGACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS-3UTR CAA 90 bp | TATTCAGCAAATTCTCTAGCCTCCCATCCACTGCCCAGGAGGCTCCTCCCAGGGATGGTAGTGCTGATTTaGAGGGGGACAGAGGACCTG | + |
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Preference number: 5 (lower is better) Translates to: YSANSLASHPLPRRLLPGMVVLI*RGTEDL Trigger: CAGGTCCTCTGTCCCCCTCAAAATCAGCACTACCAT...CCCTGGGAGGAGCCTCCTGGGCAGTGGATGGGAGGCTAGAGAATTTGCTGAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS TCA 90 bp | GGACAGAGGACCTGGGTTCTATTTTTGATGGTTCCCGTTCAGCTTTaGCTGCCAAGAAGGCAGCCAGGTCCAGGTCCAACATGGTCACCC | + |
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Preference number: 5 (lower is better) Translates to: GQRTWVLFLMVPVQL*LPRRQPGPGPTWSP Trigger: GGGTGACCATGTTGGACCTGGACCTGGCTGCCTTCTTGGCAGTCAAAGCTGAACGGGAACCATCAAAAATAGAACCCAGGTCCTCTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS-3UTR CAA 90 bp | AAGACCTACTCTGATGCCAGCCACTTACATACACCCATAGCCTGGCCCTGCCCAATGGTAGTGCTGATTTaGAGGGGGACAGAGGACCTG | + |
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Preference number: 5 (lower is better) Translates to: KTYSDASHLHTPIAWPCPMVVLI*RGTEDL Trigger: CAGGTCCTCTGTCCCCCTCAAAATCAGCACTACCAT...TGGGCAGGGCCAGGCTATGGGTGTATGTAAGTGGCTGGCATCAGAGTAGGTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS-3UTR CAA 90 bp | CCCTCCATTGCACCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCTCAACCTGGGTTCTATTTTaGATGGTTCCCGTTCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: PSIAPLFGTCAADREQSSTWVLF*MVPVQL Trigger: AAGCTGAACGGGAACCATCAAAAATAGAACCCAGGT...TGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGGTGCAATGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCTTTGGTACCTGTGCTGCAGACAGAGAACAGAGCTCAGTGAGCATTGTTACCTGGGTTCTATTTTaGATGGTTCCCGTTCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: PLFGTCAADREQSSVSIVTWVLF*MVPVQL Trigger: AAGCTGAACGGGAACCATCAAAAATAGAACCCAGGT...AACAATGCTCACTGAGCTCTGTTCTCTGTCTGCAGCACAGGTACCAAAGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS CAA 90 bp | GGGCACAGGGGTACTTTGTCGGCACTGTGGACAGGGGATCCAGTGTaGTTCGTGGGCTGGCATATCCAGCCGCTGCATGCATGCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: GHRGTLSALWTGDPV*FVGWHIQPLHACLA Trigger: TGCCAGGCATGCATGCAGCGGCTGGATATGCCAGCCCACGAACAACACTGGATCCCCTGTCCACAGTGCCGACAAAGTACCCCTGTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS CCA 72 bp | TGTCGGCACTGTGGACAGGGGATCCAGTGTTGTTCGTaGGCTGGCATATCCAGCCGCTGCATGCATGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: CRHCGQGIQCCS*AGISSRCMHAW Trigger: CCAGGCATGCATGCAGCGGCTGGATATGCCAGCCCACGAACAACACTGGATCCCCTGTCCACAGTGCCGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS CCA 72 bp | GCACTGTGGACAGGGGATCCAGTGTTGTTCGTGGGCTaGCATATCCAGCCGCTGCATGCATGCCTGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: ALWTGDPVLFVG*HIQPLHACLAE Trigger: TTCTGCCAGGCATGCATGCAGCGGCTGGATATGCCAGCCCACGAACAACACTGGATCCCCTGTCCACAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS CAA 72 bp | GGTACTTTGTCGGCACTGTGGACAGGGGATCCAGTGTaGTTCGTGGGCTGGCATATCCAGCCGCTGCATGCA | + |
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Preference number: 6 (lower is better) Translates to: GTLSALWTGDPV*FVGWHIQPLHA Trigger: TGCATGCAGCGGCTGGATATGCCAGCCCACGAACAACACTGGATCCCCTGTCCACAGTGCCGACAAAGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS TCA 72 bp | GTCATAGGCAGAGTAGCAGATGATGCAGTCATTCCGTaGGGCTGTCAGGGCTGTCCCCTCCTCCAAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: VIGRVADDAVIP*GCQGCPLLQGI Trigger: TATGCCTTGGAGGAGGGGACAGCCCTGACAGCCTCACGGAATGACTGCATCATCTGCTACTCTGCCTATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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| CDS TCA 72 bp | GCAAGTGTACTGAGAGGTCATAGGCAGAGTAGCAGATaGTGCAGTCATTCCGTGAGGCTGTCAGGGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ASVLRGHRQSSR*CSHSVRLSGLS Trigger: GGACAGCCCTGACAGCCTCACGGAATGACTGCATCATCTGCTACTCTGCCTATGACCTCTCAGTACACTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091318.5 ENSMUST00000205192.2 |
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