Pregenerated sensors for RNF217 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063760Ensembl transcript IDs: ENSMUST00000081989.8
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCATGGGAAGCCAGGGTTGGAGGACACAAGGATGATGCAGACACCTaGAGCACTGTACACATGCAATATGTCTTCTGCCTTTCATCACAG | + |
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Preference number: 1 (lower is better) Translates to: SWEARVGGHKDDADT*STVHMQYVFCLSSQ Trigger: CTGTGATGAAAGGCAGAAGACATATTGCATGTGTACAGTGCTGCAGGTGTCTGCATCATCCTTGTGTCCTCCAACCCTGGCTTCCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR TCA 90 bp | TGTAGGATATTGCAGGAACACTGGGCATATATCTGGGCAGTGAGATaGAAAGATGAAGACTCAAGCAGGGTCCTAGGATTTGGGATGATG | + |
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Preference number: 1 (lower is better) Translates to: CRILQEHWAYIWAVR*KDEDSSRVLGFGMM Trigger: CATCATCCCAAATCCTAGGACCCTGCTTGAGTCTTCATCTTTTCATCTCACTGCCCAGATATATGCCCAGTGTTCCTGCAATATCCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 90 bp | GATGATGCAGACACCTGCAGCACTGTACACATGCAATATGTCTTCTaGCTTTCATCACAGAACCAATTTTTAAAGGGCAGGGGAGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: DDADTCSTVHMQYVF*LSSQNQFLKGRGEG Trigger: TCCTTCTCCCCTGCCCTTTAAAAATTGGTTCTGTGATGAAAGGCAGAAGACATATTGCATGTGTACAGTGCTGCAGGTGTCTGCATCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR TCA 90 bp | TTTGGGATGATGCTACAGAGCTGGGCGTTTCCCAAGAAGTACCACTaGATATTGATCCCACAGCAGAGAGATATAGATACCATGTTGCAA | + |
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Preference number: 1 (lower is better) Translates to: FGMMLQSWAFPKKYH*ILIPQQRDIDTMLQ Trigger: TTGCAACATGGTATCTATATCTCTCTGCTGTGGGATCAATATTCAGTGGTACTTCTTGGGAAACGCCCAGCTCTGTAGCATCATCCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 90 bp | GTGTCAGGTTGTGGGGATGTACATGTGGTTTTTGTCCATCAGATATaGAGACGCTGCTGGACTAAGTTTCCAGTGATTGTGAATTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: VSGCGDVHVVFVHQI*RRCWTKFPVIVNFL Trigger: TAAGAAATTCACAATCACTGGAAACTTAGTCCAGCAGCGTCTGCATATCTGATGGACAAAAACCACATGTACATCCCCACAACCTGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 90 bp | TGTGGGGATGTACATGTGGTTTTTGTCCATCAGATATGCAGACGCTaGTGGACTAAGTTTCCAGTGATTGTGAATTTCTTAAGTTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: CGDVHVVFVHQICRR*WTKFPVIVNFLSLA Trigger: AGCCAAACTTAAGAAATTCACAATCACTGGAAACTTAGTCCAGCAGCGTCTGCATATCTGATGGACAAAAACCACATGTACATCCCCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR CCA 90 bp | GGGGATGTACATGTGGTTTTTGTCCATCAGATATGCAGACGCTGCTaGACTAAGTTTCCAGTGATTGTGAATTTCTTAAGTTTGGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: GDVHVVFVHQICRRC*TKFPVIVNFLSLAL Trigger: TAGAGCCAAACTTAAGAAATTCACAATCACTGGAAACTTAGTCCAGCAGCGTCTGCATATCTGATGGACAAAAACCACATGTACATCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 90 bp | CAAATATTACATCATCACACAAGCACCATATGGAAGGTTCAGGACTaGACAGCAGCTTTAGCATTACTGGAGAGTGGAAACAATGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: QILHHHTSTIWKVQD*TAALALLESGNNVD Trigger: ATCAACATTGTTTCCACTCTCCAGTAATGCTAAAGCTGCTGTGCAGTCCTGAACCTTCCATATGGTGCTTGTGTGATGATGTAATATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR TCA 90 bp | AGTCAAGTCACAAAGACCTTTCAGCATAGTTTCATTGCATTTCAGTaGAAAGAGCTAGTGGTTAAGACAATTTATTCCTCACTGGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: SQVTKTFQHSFIAFQ*KELVVKTIYSSLAK Trigger: CTTGGCCAGTGAGGAATAAATTGTCTTAACCACTAGCTCTTTTCACTGAAATGCAATGAAACTATGCTGAAAGGTCTTTGTGACTTGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 90 bp | TTCAAGAATTCTTTCTTTTCAATGATCAGTGCACTACCACTGCAGTaGCTAGAGCAGACACTATGTACAATTTATGGTACCAGCTGTATA | + |
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Preference number: 1 (lower is better) Translates to: FKNSFFSMISALPLQ*LEQTLCTIYGTSCI Trigger: TATACAGCTGGTACCATAAATTGTACATAGTGTCTGCTCTAGGCACTGCAGTGGTAGTGCACTGATCATTGAAAAGAAAGAATTCTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 90 bp | GATCTTCCATGCTTTCTTCAAGAATTCTTTCTTTTCAATGATCAGTaGACTACCACTGCAGTGCCTAGAGCAGACACTATGTACAATTTA | + |
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Preference number: 1 (lower is better) Translates to: DLPCFLQEFFLFNDQ*TTTAVPRADTMYNL Trigger: TAAATTGTACATAGTGTCTGCTCTAGGCACTGCAGTGGTAGTGCACTGATCATTGAAAAGAAAGAATTCTTGAAGAAAGCATGGAAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR CCA 90 bp | ATAGATAATAACAATAGTCTCACACTACTGGGCCTTTGTTGGGTCTaGATAACATCAACTAAAGCTGCAGATTCAAAGAGTGATGATGCA | + |
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Preference number: 1 (lower is better) Translates to: IDNNNSLTLLGLCWV*ITSTKAADSKSDDA Trigger: TGCATCATCACTCTTTGAATCTGCAGCTTTAGTTGATGTTATCCAGACCCAACAAAGGCCCAGTAGTGTGAGACTATTGTTATTATCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGGTGCACCATCCTGCATaGCTCCTCCCGGTACCGGCT | + |
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Preference number: 2 (lower is better) Translates to: LSRPKTTGTITQEYRLSQVHHPA*LLPVPA Trigger: AGCCGGTACCGGGAGGAGCCATGCAGGATGGTGCAC...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGGAATGCCACCACGCTAGCTTAAACTTGGACTGTCCTTCACCAACATGGATGCCATGTTGGGAGTaGACCGTAGCTAGAGGCACT | + |
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Preference number: 2 (lower is better) Translates to: QKECHHASLNLDCPSPTWMPCWE*TVARGT Trigger: AGTGCCTCTAGCTACGGTGCACTCCCAACATGGCAT...CCATGTTGGTGAAGGACAGTCCAAGTTTAAGCTAGCGTGGTGGCATTCCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGGAATGCCACCACGCTAGCTTAAACTTGGACTGTCCTTCACCAACATGGAAGGAAAGGACAGGATaGCATGTTGGGAGTGCACCG | + |
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Preference number: 2 (lower is better) Translates to: QKECHHASLNLDCPSPTWKERTG*HVGSAP Trigger: CGGTGCACTCCCAACATGGCATCCTGTCCTTTCCTT...CCATGTTGGTGAAGGACAGTCCAAGTTTAAGCTAGCGTGGTGGCATTCCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGCCAAAACCTCGCCACTaGGGAGAAAGTTGGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LSRPKTTGTITQEYRLSQPKPRH*GESWPA Trigger: AGCTGGCCAACTTTCTCCTCAGTGGCGAGGTTTTGG...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGCTCTGGAGTCAGCACTaGTGCATGCTCCTCTCACCA | + |
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Preference number: 2 (lower is better) Translates to: LSRPKTTGTITQEYRLSQLWSQH*CMLLSP Trigger: TGGTGAGAGGAGCATGCAGCAGTGCTGACTCCAGAG...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGGTCAGCACTGCTGCATaGTCCTCTCACCAAAACCTC | + |
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Preference number: 2 (lower is better) Translates to: LSRPKTTGTITQEYRLSQVSTAA*SSHQNL Trigger: GAGGTTTTGGTGAGAGGAGCATGCAGCAGTGCTGAC...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGTGCCAGAAGGGTGGCTaGAGGCACAGTAAGATGAAT | + |
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Preference number: 2 (lower is better) Translates to: LSRPKTTGTITQEYRLSQCQKGG*RHSKMN Trigger: ATTCATCTTACTGTGCCTTCAGCCACCCTTCTGGCA...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGGAATGCCACCACGCTAGCTTAAACTTGGACTGTCCTTCACCAACATGGTCCTCAAAAGACATCTaGGGATATCCTGTTCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: QKECHHASLNLDCPSPTWSSKDI*GYPVLK Trigger: TTTGAGAACAGGATATCCTCAGATGTCTTTTGAGGA...CCATGTTGGTGAAGGACAGTCCAAGTTTAAGCTAGCGTGGTGGCATTCCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGGAATGCCACCACGCTAGCTTAAACTTGGACTGTCCTTCACCAACATGGCCATCCGTATGGATTTaGCAGTTTACAATGTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: QKECHHASLNLDCPSPTWPSVWI*QFTMFG Trigger: ACCAAACATTGTAAACTGGCAAATCCATACGGATGG...CCATGTTGGTGAAGGACAGTCCAAGTTTAAGCTAGCGTGGTGGCATTCCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR CAA 90 bp | TATTACAAATTTATGCACTTACAAATGAGATGCCTGTTCAGCACTTaGTGCCATCTCCCAGCCTCTGATGAAACAGCCTTCCCTCGTAAC | + |
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Preference number: 2 (lower is better) Translates to: YYKFMHLQMRCLFST*CHLPASDETAFPRN Trigger: GTTACGAGGGAAGGCTGTTTCATCAGAGGCTGGGAGATGGCACAAAGTGCTGAACAGGCATCTCATTTGTAAGTGCATAAATTTGTAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGGAAGGCACAGTAAGATaGATTTGTGAAACCAGACAC | + |
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Preference number: 2 (lower is better) Translates to: LSRPKTTGTITQEYRLSQEGTVR*ICETRH Trigger: GTGTCTGGTTTCACAAATTCATCTTACTGTGCCTTC...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR CAA 90 bp | AGACGCTGCTGGACTAAGTTTCCAGTGATTGTGAATTTCTTAAGTTaGGCTCTAGTTAGTATGTTAACTCCCTGGTCCAATTGGCATCTC | + |
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Preference number: 2 (lower is better) Translates to: RRCWTKFPVIVNFLS*ALVSMLTPWSNWHL Trigger: GAGATGCCAATTGGACCAGGGAGTTAACATACTAACTAGAGCCAAACTTAAGAAATTCACAATCACTGGAAACTTAGTCCAGCAGCGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGAAAGTCCAAGGAATCTaGAAAGAGCAACTGTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LSRPKTTGTITQEYRLSQKVQGI*KEQLLE Trigger: TTCCAACAGTTGCTCTTTTCAGATTCCTTGGACTTT...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR GCA 90 bp | CTAAGGATGTCATTCTATTTGCACAAAACTAACACACAAGGGTACATACGTACATGGAGTCAGCACTGCTaGATGCTCCTCTCACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LRMSFYLHKTNTQGYIRTWSQHC*MLLSPK Trigger: TTTTGGTGAGAGGAGCATGCAGCAGTGCTGACTCCA...TGTACGTATGTACCCTTGTGTGTTAGTTTTGTGCAAATAGAATGACATCCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGATGTCATTCTATTTGCACAAAACTAACACACAAGGGTACATACGTACACAACTGTTGGAAACGTaGGACTTTCTGAAACCATCC | + |
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Preference number: 2 (lower is better) Translates to: LRMSFYLHKTNTQGYIRTQLLET*DFLKPS Trigger: GGATGGTTTCAGAAAGTCCCACGTTTCCAACAGTTG...TGTACGTATGTACCCTTGTGTGTTAGTTTTGTGCAAATAGAATGACATCCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAGGATGTCATTCTATTTGCACAAAACTAACACACAAGGGTACATACGTACAAAACGTGGGACTTTCTaGAACCATCCGTATGGATTT | + |
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Preference number: 2 (lower is better) Translates to: LRMSFYLHKTNTQGYIRTKRGTF*NHPYGF Trigger: AAATCCATACGGATGGTTTCAGAAAGTCCCACGTTT...TGTACGTATGTACCCTTGTGTGTTAGTTTTGTGCAAATAGAATGACATCCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR CAA 90 bp | TGTTTGAAGAATTTAGACATATTTGCTGGCACGAATCCATTCTCGTaGCTGAAAAGCATACACGTGTTCTCTTCTGTTTTATCAGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: CLKNLDIFAGTNPFS*LKSIHVFSSVLSVN Trigger: ATTAACTGATAAAACAGAAGAGAACACGTGTATGCTTTTCAGCAACGAGAATGGATTCGTGCCAGCAAATATGTCTAAATTCTTCAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR CCA 72 bp | GCAAATCCAGCCAACGCCAGACCTAAGGCTTCTGGCTaGGCCACCTGCCAAGCATCGTACCTGGATGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: ANPANARPKASG*ATCQASYLDAC Trigger: ACAGGCATCCAGGTACGATGCTTGGCAGGTGGCCCAGCCAGAAGCCTTAGGTCTGGCGTTGGCTGGATTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 72 bp | GGCCACGCAGGCCAGGGTGAGCTGTTCCCCTCAACATaGTTCTCCTCTTCTCTGATGGTGACTCAAGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: GHAGQGELFPST*FSSSLMVTQVW Trigger: CCACACTTGAGTCACCATCAGAGAAGAGGAGAAGCATGTTGAGGGGAACAGCTCACCCTGGCCTGCGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR TCA 72 bp | AAGCCAGTAGAAACACTGAGGCCACGCAGGCCAGGGTaGGCTGTTCCCCTCAACATGCTTCTCCTCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: KPVETLRPRRPG*AVPLNMLLLFS Trigger: AGAGAAGAGGAGAAGCATGTTGAGGGGAACAGCTCACCCTGGCCTGCGTGGCCTCAGTGTTTCTACTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR TCA 72 bp | CACTGCTGCATGCTCCTCTCACCAAAACCTCGCCACTaGGGAGAAAGTTGGCCAGCTCGTCACAATTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: HCCMLLSPKPRH*GESWPARHNCS Trigger: TGAGCAATTGTGACGAGCTGGCCAACTTTCTCCTCAGTGGCGAGGTTTTGGTGAGAGGAGCATGCAGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 72 bp | TCTAGAATATGCAACTCTGGAGTCAGCACTGCTGCATaGTCCTCTCACCAAAACCTCGCCACTGAGGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SRICNSGVSTAA*SSHQNLATEEK Trigger: TTTCTCCTCAGTGGCGAGGTTTTGGTGAGAGGAGCATGCAGCAGTGCTGACTCCAGAGTTGCATATTCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGGAATGCCACCACGCTAGCTTAAACTTGGACTGTCCTTCACCAACATGGGAAAAGTGGCTTTGTTaGTTGAGACAGGCCGGATTC | + |
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Preference number: 3 (lower is better) Translates to: QKECHHASLNLDCPSPTWEKWLC*LRQAGF Trigger: GAATCCGGCCTGTCTCAACAAACAAAGCCACTTTTC...CCATGTTGGTGAAGGACAGTCCAAGTTTAAGCTAGCGTGGTGGCATTCCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 72 bp | AAAGTTGGCCAGCTCGTCACAATTGCTCAGAAGGAATaGCACCACGCTAGCTTAAACTTGGACTGTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: KVGQLVTIAQKE*HHASLNLDCPS Trigger: TGAAGGACAGTCCAAGTTTAAGCTAGCGTGGTGGCATTCCTTCTGAGCAATTGTGACGAGCTGGCCAACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 72 bp | ATGCACTTACAAATGAGATGCCTGTTCAGCACTTTGTaGCATCTCCCAGCCTCTGATGAAACAGCCTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: MHLQMRCLFSTL*HLPASDETAFP Trigger: AGGGAAGGCTGTTTCATCAGAGGCTGGGAGATGGCACAAAGTGCTGAACAGGCATCTCATTTGTAAGTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 72 bp | CATCATCACACAAGCACCATATGGAAGGTTCAGGACTaGACAGCAGCTTTAGCATTACTGGAGAGTGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: HHHTSTIWKVQD*TAALALLESGN Trigger: GTTTCCACTCTCCAGTAATGCTAAAGCTGCTGTGCAGTCCTGAACCTTCCATATGGTGCTTGTGTGATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR TCA 72 bp | ATGCTACAGAGCTGGGCGTTTCCCAAGAAGTACCACTaGATATTGATCCCACAGCAGAGAGATATAGATACC | + |
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Preference number: 3 (lower is better) Translates to: MLQSWAFPKKYH*ILIPQQRDIDT Trigger: GGTATCTATATCTCTCTGCTGTGGGATCAATATTCAGTGGTACTTCTTGGGAAACGCCCAGCTCTGTAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR TCA 72 bp | TTGCAGGAACACTGGGCATATATCTGGGCAGTGAGATaGAAAGATGAAGACTCAAGCAGGGTCCTAGGATTT | + |
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Preference number: 3 (lower is better) Translates to: LQEHWAYIWAVR*KDEDSSRVLGF Trigger: AAATCCTAGGACCCTGCTTGAGTCTTCATCTTTTCATCTCACTGCCCAGATATATGCCCAGTGTTCCTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 72 bp | TGTGGGGATGTACATGTGGTTTTTGTCCATCAGATATaGAGACGCTGCTGGACTAAGTTTCCAGTGATTGTG | + |
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Preference number: 3 (lower is better) Translates to: CGDVHVVFVHQI*RRCWTKFPVIV Trigger: CACAATCACTGGAAACTTAGTCCAGCAGCGTCTGCATATCTGATGGACAAAAACCACATGTACATCCCCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 72 bp | GACACCTGCAGCACTGTACACATGCAATATGTCTTCTaGCTTTCATCACAGAACCAATTTTTAAAGGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: DTCSTVHMQYVF*LSSQNQFLKGR Trigger: CCTGCCCTTTAAAAATTGGTTCTGTGATGAAAGGCAGAAGACATATTGCATGTGTACAGTGCTGCAGGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 72 bp | ACAAGGATGATGCAGACACCTGCAGCACTGTACACATaGAATATGTCTTCTGCCTTTCATCACAGAACCAAT | + |
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Preference number: 3 (lower is better) Translates to: TRMMQTPAALYT*NMSSAFHHRTN Trigger: ATTGGTTCTGTGATGAAAGGCAGAAGACATATTGCATGTGTACAGTGCTGCAGGTGTCTGCATCATCCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 72 bp | GAAACGTGGGACTTTCTGAAACCATCCGTATGGATTTaGCAGTTTACAATGTTTGGTATGTGTCAGAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: ETWDFLKPSVWI*QFTMFGMCQSD Trigger: GTCACTCTGACACATACCAAACATTGTAAACTGGCAAATCCATACGGATGGTTTCAGAAAGTCCCACGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR CCA 72 bp | CACGCTAGCTTAAACTTGGACTGTCCTTCACCAACATaGACTTTTCCAGTGAAACACAAGGGTATAAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: HASLNLDCPSPT*TFPVKHKGIKF Trigger: GAACTTTATACCCTTGTGTTTCACTGGAAAAGTCCATGTTGGTGAAGGACAGTCCAAGTTTAAGCTAGCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR CCA 72 bp | AACAATAGTCTCACACTACTGGGCCTTTGTTGGGTCTaGATAACATCAACTAAAGCTGCAGATTCAAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: NNSLTLLGLCWV*ITSTKAADSKS Trigger: ACTCTTTGAATCTGCAGCTTTAGTTGATGTTATCCAGACCCAACAAAGGCCCAGTAGTGTGAGACTATTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR CCA 72 bp | ACTGCAGTGCCTAGAGCAGACACTATGTACAATTTATaGTACCAGCTGTATAAAACACTTATCTGGAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: TAVPRADTMYNL*YQLYKTLIWKV Trigger: CACCTTCCAGATAAGTGTTTTATACAGCTGGTACCATAAATTGTACATAGTGTCTGCTCTAGGCACTGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGGGAAACAATCTGTTGTaGACATTGGCTTTAATTCAG | + |
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Preference number: 3 (lower is better) Translates to: LSRPKTTGTITQEYRLSQGNNLL*TLALIQ Trigger: CTGAATTAAAGCCAATGTCAACAACAGATTGTTTCC...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| 3UTR GCA 72 bp | GTACATGTGGTTTTTGTCCATCAGATATGCAGACGCTaGTGGACTAAGTTTCCAGTGATTGTGAATTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: VHVVFVHQICRR*WTKFPVIVNFL Trigger: TAAGAAATTCACAATCACTGGAAACTTAGTCCAGCAGCGTCTGCATATCTGATGGACAAAAACCACATGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR CCA 72 bp | CATGTGGTTTTTGTCCATCAGATATGCAGACGCTGCTaGACTAAGTTTCCAGTGATTGTGAATTTCTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: HVVFVHQICRRC*TKFPVIVNFLS Trigger: ACTTAAGAAATTCACAATCACTGGAAACTTAGTCCAGCAGCGTCTGCATATCTGATGGACAAAAACCACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR CCA 72 bp | CATACACAAATATTACATCATCACACAAGCACCATATaGAAGGTTCAGGACTGCACAGCAGCTTTAGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: HTQILHHHTSTI*KVQDCTAALAL Trigger: TAATGCTAAAGCTGCTGTGCAGTCCTGAACCTTCCATATGGTGCTTGTGTGATGATGTAATATTTGTGTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR CCA 72 bp | AGACATGGAAATAGGCAAGCACATGGTTATGGAGCCTaGTTTAATACGGTGTTTATATACACACATTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: RHGNRQAHGYGA*FNTVFIYTHSH Trigger: ATGTGAATGTGTGTATATAAACACCGTATTAAACCAGGCTCCATAACCATGTGCTTGCCTATTTCCATGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR TCA 72 bp | TATGGTACCAGCTGTATAAAACACTTATCTGGAAGGTaGCCTCTTCAGCAATGTAAGAAATTGAGTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: YGTSCIKHLSGR*PLQQCKKLSLL Trigger: CAAAAGACTCAATTTCTTACATTGCTGAAGAGGTCACCTTCCAGATAAGTGTTTTATACAGCTGGTACCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR GCA 72 bp | GTTAATTACTTAAACAGGACAAATGCTGGGGAAAAGTaGATCCATGTTAAGGCTGGCAATTATAACAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: VNYLNRTNAGEK*IHVKAGNYNRH Trigger: ATGTCTGTTATAATTGCCAGCCTTAACATGGATGCACTTTTCCCCAGCATTTGTCCTGTTTAAGTAATTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR TCA 72 bp | AATATGCATGATTACATGCTTGTACAACTGACAACATaGACAAGGATGCGTAAGGTATATACAAAGGTATGC | + |
|
Preference number: 3 (lower is better) Translates to: NMHDYMLVQLTT*TRMRKVYTKVC Trigger: GCATACCTTTGTATATACCTTACGCATCCTTGTTCATGTTGTCAGTTGTACAAGCATGTAATCATGCATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR CCA 72 bp | AATGATATTTGTAAAGTTTTGTGGCTTCACCATAATTaGAGCCACAGACAAGCTTATCGATTGTTTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: NDICKVLWLHHN*SHRQAYRLFPV Trigger: AACTGGAAACAATCGATAAGCTTGTCTGTGGCTCCAATTATGGTGAAGCCACAAAACTTTACAAATATCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR TCA 72 bp | ACAAAGACCTTTCAGCATAGTTTCATTGCATTTCAGTaGAAAGAGCTAGTGGTTAAGACAATTTATTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TKTFQHSFIAFQ*KELVVKTIYSS Trigger: TGAGGAATAAATTGTCTTAACCACTAGCTCTTTTCACTGAAATGCAATGAAACTATGCTGAAAGGTCTTTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR TCA 90 bp | GGAGACAAGATGGCAGAAGTTCCTCTAGGTAGTTTTAAGGATCCAACTCACAGAGGCCCCAGCGGTGCTTaGGGTGGGGACTCCGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: GDKMAEVPLGSFKDPTHRGPSGA*GGDSDG Trigger: GCCGTCGGAGTCCCCACCTCAAGCACCGCTGGGGCC...TCTGTGAGTTGGATCCTTAAAACTACCTAGAGGAACTTCTGCCATCTTGTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGGGCACATCAGCACCATaGGGGGCGCATAGGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRPKTTGTITQEYRLSQGTSAP*GAHRGP Trigger: GGGACCCCTATGCGCCCCTCATGGTGCTGATGTGCC...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR GCA 90 bp | GGAGACAAGATGGCAGAAGTTCCTCTAGGTAGTTTTAAGGATCCAACTCACAGAACTCCAGCTCGATGCTaGCGCCGTCGGGGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GDKMAEVPLGSFKDPTHRTPARC*RRRGKG Trigger: CCCTTTCCCCCGACGGCGGCAGCATCGAGCTGGAGT...TCTGTGAGTTGGATCCTTAAAACTACCTAGAGGAACTTCTGCCATCTTGTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGTGCAGTTCCAGACTCTaGGGGTCCAGGGGCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRPKTTGTITQEYRLSQCSSRL*GSRGPL Trigger: CAGCGGGCCCCTGGACCCCCAGAGTCTGGAACTGCA...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR GCA 90 bp | GGAGACAAGATGGCAGAAGTTCCTCTAGGTAGTTTTAAGGATCCAACTCACAGAAATCGGCCCCAGCGGTaGTTGAGGTGGGGACTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GDKMAEVPLGSFKDPTHRNRPQR*LRWGLR Trigger: TCGGAGTCCCCACCTCAAGCACCGCTGGGGCCGATT...TCTGTGAGTTGGATCCTTAAAACTACCTAGAGGAACTTCTGCCATCTTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGAATGCCACCACGCTAGCTTAAACTTGGACTGTCCTTCACCAACATGGATTGAGGACATGGCTTaGTGCTGGAGTCAATTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKECHHASLNLDCPSPTWIEDMA*CWSQFG Trigger: GCCGAATTGACTCCAGCACCAAGCCATGTCCTCAAT...CCATGTTGGTGAAGGACAGTCCAAGTTTAAGCTAGCGTGGTGGCATTCCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR TCA 90 bp | GGAGACAAGATGGCAGAAGTTCCTCTAGGTAGTTTTAAGGATCCAACTCACAGAAGCTCAGGTAGATTTTaGGGCACTCCTCGCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: GDKMAEVPLGSFKDPTHRSSGRF*GTPRTP Trigger: CGGTGTGCGAGGAGTGCCTCAAAATCTACCTGAGCT...TCTGTGAGTTGGATCCTTAAAACTACCTAGAGGAACTTCTGCCATCTTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGCGTGCTCAATCTCACTaGCCCAGTGACGCAGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSRPKTTGTITQEYRLSQRAQSH*PSDAVT Trigger: AGTTACTGCGTCACTGGGCCAGTGAGATTGAGCACG...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CCA 90 bp | GGAGACAAGATGGCAGAAGTTCCTCTAGGTAGTTTTAAGGATCCAACTCACAGACACTTTGGACACTTCTaGGCATTTCTCTGCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GDKMAEVPLGSFKDPTHRHFGHF*AFLCPC Trigger: GCACGGGCAGAGAAATGCCCAGAAGTGTCCAAAGTG...TCTGTGAGTTGGATCCTTAAAACTACCTAGAGGAACTTCTGCCATCTTGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR TCA 90 bp | GGAGACAAGATGGCAGAAGTTCCTCTAGGTAGTTTTAAGGATCCAACTCACAGAGTGAAGTGTTTGCATTaGGGACATGGCTTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDKMAEVPLGSFKDPTHRVKCLH*GHGLVL Trigger: CAGCACCAAGCCATGTCCTCAATGCAAACACTTCAC...TCTGTGAGTTGGATCCTTAAAACTACCTAGAGGAACTTCTGCCATCTTGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGGATGTCATTCTATTTGCACAAAACTAACACACAAGGGTACATACGTACAAGAACTCCAGCTCGATaGTGCCGCCGTCGGGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRMSFYLHKTNTQGYIRTRTPAR*CRRRGK Trigger: TTTCCCCCGACGGCGGCAGCATCGAGCTGGAGTTCT...TGTACGTATGTACCCTTGTGTGTTAGTTTTGTGCAAATAGAATGACATCCTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGGACATGGCTTGGTGCTaGAGTCAATTCGGCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSRPKTTGTITQEYRLSQDMAWC*SQFGQV Trigger: AACTTGGCCGAATTGACTCCAGCACCAAGCCATGTC...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CCA 90 bp | GGAGACAAGATGGCAGAAGTTCCTCTAGGTAGTTTTAAGGATCCAACTCACAGACTGAGGTTTGATGTGTaGTCTCCGAAAAACCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDKMAEVPLGSFKDPTHRLRFDV*SPKNRS Trigger: GCTCCGGTTTTTCGGAGACCACACATCAAACCTCAG...TCTGTGAGTTGGATCCTTAAAACTACCTAGAGGAACTTCTGCCATCTTGTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGCGATTACAACTGCTATaGCCCCTAGTGCCAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRPKTTGTITQEYRLSQRLQLL*PLVPIP Trigger: TGGGATTGGCACTAGGGGCCATAGCAGTTGTAATCG...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR CAA 72 bp | ACTACGTGTCAGGTTGTGGGGATGTACATGTGGTTTTaGTCCATCAGATATGCAGACGCTGCTGGACTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTCQVVGMYMWF*SIRYADAAGLS Trigger: ACTTAGTCCAGCAGCGTCTGCATATCTGATGGACAAAAACCACATGTACATCCCCACAACCTGACACGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGTTTGTATCTGCTTTCTaGTCTGGAAGGAGTGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSRPKTTGTITQEYRLSQFVSAF*SGRSGD Trigger: ATCCCCACTCCTTCCAGATCAGAAAGCAGATACAAA...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGTTTGCATTGAGGACATaGCTTGGTGCTGGAGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSRPKTTGTITQEYRLSQFALRT*LGAGVN Trigger: ATTGACTCCAGCACCAAGCCATGTCCTCAATGCAAA...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGTGCATCCAAATATACTaGGGTTTGATGTGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRPKTTGTITQEYRLSQCIQIY*GLMCGL Trigger: GAGACCACACATCAAACCTCAGTATATTTGGATGCA...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGGATGTCATTCTATTTGCACAAAACTAACACACAAGGGTACATACGTACAGAGGACATGGCTTGGTaGTGGAGTCAATTCGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRMSFYLHKTNTQGYIRTEDMAW*WSQFGQ Trigger: TTGGCCGAATTGACTCCAGCACCAAGCCATGTCCTC...TGTACGTATGTACCCTTGTGTGTTAGTTTTGTGCAAATAGAATGACATCCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CCA 90 bp | GGAGACAAGATGGCAGAAGTTCCTCTAGGTAGTTTTAAGGATCCAACTCACAGAAAACACCAGATCAATTaGCAAGTGGGACACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GDKMAEVPLGSFKDPTHRKHQIN*QVGHWI Trigger: AATCCAGTGTCCCACTTGCCAATTGATCTGGTGTTT...TCTGTGAGTTGGATCCTTAAAACTACCTAGAGGAACTTCTGCCATCTTGTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGCACCCTTCTGTTCTCTaGATATGGATCTTGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSRPKTTGTITQEYRLSQHPSVL*IWILHF Trigger: AAAGTGCAAGATCCATATCCAGAGAACAGAAGGGTG...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGGATGTCATTCTATTTGCACAAAACTAACACACAAGGGTACATACGTACATTCTGGGCATTTCTCTaGCCGTGCTCAATCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRMSFYLHKTNTQGYIRTFWAFL*PCSISL Trigger: CAGTGAGATTGAGCACGGGCAGAGAAATGCCCAGAA...TGTACGTATGTACCCTTGTGTGTTAGTTTTGTGCAAATAGAATGACATCCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CCA 90 bp | GGAGACAAGATGGCAGAAGTTCCTCTAGGTAGTTTTAAGGATCCAACTCACAGAAGATCAATTGGCAAGTaGGACACTGGATTTTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: GDKMAEVPLGSFKDPTHRRSIGK*DTGFCI Trigger: GATACAAAATCCAGTGTCCCACTTGCCAATTGATCT...TCTGTGAGTTGGATCCTTAAAACTACCTAGAGGAACTTCTGCCATCTTGTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGATTAGTGTTACACTGTaGACAAGTCATATGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSRPKTTGTITQEYRLSQISVTL*TSHMVT Trigger: TGTGACCATATGACTTGTTCACAGTGTAACACTAAT...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGGATGTCATTCTATTTGCACAAAACTAACACACAAGGGTACATACGTACATCTGGATATGGATCTTaGACTTTGGACACTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRMSFYLHKTNTQGYIRTSGYGS*TLDTSG Trigger: CCCAGAAGTGTCCAAAGTGCAAGATCCATATCCAGA...TGTACGTATGTACCCTTGTGTGTTAGTTTTGTGCAAATAGAATGACATCCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR CAA 72 bp | GTGAACTTTGATTTATCTTCTGAAAAGTGGCTTTGTTaGTTGAGACAGGCCGGATTCAGCTATGCATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: VNFDLSSEKWLC*LRQAGFSYAYH Trigger: ATGGTATGCATAGCTGAATCCGGCCTGTCTCAACAAACAAAGCCACTTTTCAGAAGATAAATCAAAGTTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR CAA 72 bp | GGGTACATACGTACACACGTAAGAACACACACTTATTaGTACATTAGAAGGAAGGAAGCATCTAGGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GYIRTHVRTHTY*YIRRKEASRRI Trigger: TATCCTCCTAGATGCTTCCTTCCTTCTAATGTACAAATAAGTGTGTGTTCTTACGTGTGTACGTATGTACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR CAA 72 bp | CAAAGGAAGAGACACAGTGGAGTCCCATCCATTGATTaGCTTTCAAAAAGTAAAATCACCGTCTTAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: QRKRHSGVPSID*LSKSKITVLNT Trigger: GGTATTTAAGACGGTGATTTTACTTTTTGAAAGCAAATCAATGGATGGGACTCCACTGTGTCTCTTCCTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR CAA 72 bp | CTTCACCATAATTGGAGCCACAGACAAGCTTATCGATaGTTTCCAGTTTATTCAGCCTTTGTGTGTGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LHHNWSHRQAYR*FPVYSAFVCVL Trigger: TAAAACACACACAAAGGCTGAATAAACTGGAAACAATCGATAAGCTTGTCTGTGGCTCCAATTATGGTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGGATGTCATTCTATTTGCACAAAACTAACACACAAGGGTACATACGTACAACTGGATTTTGTATCTaGTTTCTGATCTGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRMSFYLHKTNTQGYIRTTGFCI*FLIWKE Trigger: CTCCTTCCAGATCAGAAAGCAGATACAAAATCCAGT...TGTACGTATGTACCCTTGTGTGTTAGTTTTGTGCAAATAGAATGACATCCTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| 3UTR CAA 72 bp | TGGACTAAGTTTCCAGTGATTGTGAATTTCTTAAGTTaGGCTCTAGTTAGTATGTTAACTCCCTGGTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WTKFPVIVNFLS*ALVSMLTPWSN Trigger: ATTGGACCAGGGAGTTAACATACTAACTAGAGCCAAACTTAAGAAATTCACAATCACTGGAAACTTAGTCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGGATGTCATTCTATTTGCACAAAACTAACACACAAGGGTACATACGTACAAAATATACTGAGGTTTaGTGTGTGGTCTCCGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRMSFYLHKTNTQGYIRTKYTEV*CVVSEK Trigger: TTTTTCGGAGACCACACATCAAACCTCAGTATATTT...TGTACGTATGTACCCTTGTGTGTTAGTTTTGTGCAAATAGAATGACATCCTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS GCA 90 bp | GCACGGAGAAGGGCTCCGGAGCCAGGTAGAACTCCAGCTCGATGCTaGCGCCGTCGGGGGAAAGGGGGTCAGCCGGGAGCGACAGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARRRAPEPGRTPARC*RRRGKGGQPGATAG Trigger: CCCCGCTGTCGCTCCCGGCTGACCCCCTTTCCCCCGACGGCGGCAGCATCGAGCTGGAGTTCTACCTGGCTCCGGAGCCCTTCTCCGTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS GCA 90 bp | CAGGCACGGAGAAGGGCTCCGGAGCCAGGTAGAACTCCAGCTCGATaGTGCCGCCGTCGGGGGAAAGGGGGTCAGCCGGGAGCGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: QARRRAPEPGRTPAR*CRRRGKGGQPGATA Trigger: CGCTGTCGCTCCCGGCTGACCCCCTTTCCCCCGACGGCGGCAGCATCGAGCTGGAGTTCTACCTGGCTCCGGAGCCCTTCTCCGTGCCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGCGGCCCCAGCGGTGCTaGAGGTGGGGACTCCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: LSRPKTTGTITQEYRLSQRPQRC*RWGLRR Trigger: CCGTCGGAGTCCCCACCTCAAGCACCGCTGGGGCCG...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGCAGCAGGGCAGGGGCTaGATGGGTTTGTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSRPKTTGTITQEYRLSQQQGRG*MGLSSR Trigger: CCTGGAAGACAAACCCATCAAGCCCCTGCCCTGCTG...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS TCA 90 bp | TCTCTCTGGGAGGTAGCGATATTTGCATCCAAATATACTGAGGTTTaGTGTGTGGTCTCCGAAAAACCGGAGCTGGCGGTATCTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLWEVAIFASKYTEV*CVVSEKPELAVSLS Trigger: GGAGAGAGATACCGCCAGCTCCGGTTTTTCGGAGACCACACATCAAACCTCAGTATATTTGGATGCAAATATCGCTACCTCCCAGAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGGAATGCCACCACGCTAGCTTAAACTTGGACTGTCCTTCACCAACATGGTGTGAAGTGTTTGCATaGAGGACATGGCTTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QKECHHASLNLDCPSPTWCEVFA*RTWLGA Trigger: AGCACCAAGCCATGTCCTCAATGCAAACACTTCACA...CCATGTTGGTGAAGGACAGTCCAAGTTTAAGCTAGCGTGGTGGCATTCCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
||
| CDS TCA 90 bp | AATGAGGTCTCTCTGGGAGGTAGCGATATTTGCATCCAAATATACTaGGGTTTGATGTGTGGTCTCCGAAAAACCGGAGCTGGCGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: NEVSLGGSDICIQIY*GLMCGLRKTGAGGI Trigger: GATACCGCCAGCTCCGGTTTTTCGGAGACCACACATCAAACCTCAGTATATTTGGATGCAAATATCGCTACCTCCCAGAGAGACCTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGGAATGCCACCACGCTAGCTTAAACTTGGACTGTCCTTCACCAACATGGAAAACACCAGATCAATaGGCAAGTGGGACACTGGAT | + |
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Preference number: 5 (lower is better) Translates to: QKECHHASLNLDCPSPTWKTPDQ*ASGTLD Trigger: ATCCAGTGTCCCACTTGCCAATTGATCTGGTGTTTT...CCATGTTGGTGAAGGACAGTCCAAGTTTAAGCTAGCGTGGTGGCATTCCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGGAATGCCACCACGCTAGCTTAAACTTGGACTGTCCTTCACCAACATGGTATGGATCTTGCACTTaGGACACTTCTGGGCATTTC | + |
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Preference number: 5 (lower is better) Translates to: QKECHHASLNLDCPSPTWYGSCT*DTSGHF Trigger: GAAATGCCCAGAAGTGTCCAAAGTGCAAGATCCATA...CCATGTTGGTGAAGGACAGTCCAAGTTTAAGCTAGCGTGGTGGCATTCCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS-3UTR CAA 90 bp | CTAAGGATGTCATTCTATTTGCACAAAACTAACACACAAGGGTACATACGTACAAGGGGCTTGATGGGTTaGTCTTCCAGGCACACCCGG | + |
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Preference number: 5 (lower is better) Translates to: LRMSFYLHKTNTQGYIRTRGLMG*SSRHTR Trigger: CCGGGTGTGCCTGGAAGACAAACCCATCAAGCCCCT...TGTACGTATGTACCCTTGTGTGTTAGTTTTGTGCAAATAGAATGACATCCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS-3UTR CAA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGTTCTACTTGGCCAAGTaGTACCTGAGAGCTCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: LSRPKTTGTITQEYRLSQFYLAK*YLRAQV Trigger: TACCTGAGCTCTCAGGTACAACTTGGCCAAGTAGAA...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS-3UTR CAA 90 bp | GGAGACAAGATGGCAGAAGTTCCTCTAGGTAGTTTTAAGGATCCAACTCACAGACTCTGGATATGGATCTaGCACTTTGGACACTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: GDKMAEVPLGSFKDPTHRLWIWI*HFGHFW Trigger: CCAGAAGTGTCCAAAGTGCAAGATCCATATCCAGAG...TCTGTGAGTTGGATCCTTAAAACTACCTAGAGGAACTTCTGCCATCTTGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS CCA 90 bp | ACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGATCAATTaGCAAGTGGGACACTGGATTTTGTATCTGCTTTCTGATCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: TPSCQGEWHLKHQIN*QVGHWILYLLSDLE Trigger: TTCCAGATCAGAAAGCAGATACAAAATCCAGTGTCCCACTTGCCAATTGATCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS-3UTR CAA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGGCATTTGATTTCTACTaGGCCAAGTTGTACCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: LSRPKTTGTITQEYRLSQAFDFY*AKLYLR Trigger: TCTCAGGTACAACTTGGCCAAGTAGAAATCAAATGC...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS TCA 90 bp | GCGGTATCTCTCTCCACATCGATAGCAAAAATTAGTGTTACACTGTaGACAAGTCATATGGTCACACCCTTCTGTTCTCTGGATATGGAT | + |
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Preference number: 5 (lower is better) Translates to: AVSLSTSIAKISVTL*TSHMVTPFCSLDMD Trigger: ATCCATATCCAGAGAACAGAAGGGTGTGACCATATGACTTGTTCACAGTGTAACACTAATTTTTGCTATCGATGTGGAGAGAGATACCGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS-3UTR CAA 90 bp | CTGAGTAGGCCAAAGACAACAGGCACAATAACCCAAGAATACAGACTATCTCAGAAGAAGTACTTATACTaGATAGAGTCCTCATGGGTT | + |
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Preference number: 5 (lower is better) Translates to: LSRPKTTGTITQEYRLSQKKYLY*IESSWV Trigger: AACCCATGAGGACTCTATCAAGTATAAGTACTTCTT...CTGAGATAGTCTGTATTCTTGGGTTATTGTGCCTGTTGTCTTTGGCCTACTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS-3UTR CAA 90 bp | CTAAGGATGTCATTCTATTTGCACAAAACTAACACACAAGGGTACATACGTACAAATTGTAGACAACAGTaGTTTCCTCCAGGAATTCGA | + |
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Preference number: 5 (lower is better) Translates to: LRMSFYLHKTNTQGYIRTNCRQQ*FPPGIR Trigger: TCGAATTCCTGGAGGAAACAACTGTTGTCTACAATT...TGTACGTATGTACCCTTGTGTGTTAGTTTTGTGCAAATAGAATGACATCCTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS GCA 72 bp | GGGTCCAGGGGCCCGCTGAGTGGCAGTCGCGCGGGCTaGCCTGCCGGGGCCCGGTTGCTCGCAGGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSRGPLSGSRAG*PAGARLLAGSW Trigger: CCAGGAGCCTGCGAGCAACCGGGCCCCGGCAGGGCAGCCCGCGCGACTGCCACTCAGCGGGCCCCTGGACCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS CAA 90 bp | GGCCCGCTGAGTGGCAGTCGCGCGGGCTGCCCTGCCGGGGCCCGGTaGCTCGCAGGCTCCTGGACACTCGCGTCCACGCAGCCCGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GPLSGSRAGCPAGAR*LAGSWTLASTQPGS Trigger: AGACCCGGGCTGCGTGGACGCGAGTGTCCAGGAGCCTGCGAGCAACCGGGCCCCGGCAGGGCAGCCCGCGCGACTGCCACTCAGCGGGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS GCA 72 bp | CAGGGGCCCGCTGAGTGGCAGTCGCGCGGGCTGCCCTaGCGGGGCCCGGTTGCTCGCAGGCTCCTGGACACT | + |
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Preference number: 6 (lower is better) Translates to: QGPAEWQSRGLP*RGPVARRLLDT Trigger: AGTGTCCAGGAGCCTGCGAGCAACCGGGCCCCGGCAGGGCAGCCCGCGCGACTGCCACTCAGCGGGCCCCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS GCA 72 bp | GCTCCTGGACACTCGCGTCCACGCAGCCCGGGTCTCTaGCGCCGCCGCCGCCGTTCGGCCGTGAAGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: APGHSRPRSPGL*RRRRRSAVKRR Trigger: CCTCCTCTTCACGGCCGAACGGCGGCGGCGGCGGCAGAGACCCGGGCTGCGTGGACGCGAGTGTCCAGGAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS CAA 72 bp | AGTGGCAGTCGCGCGGGCTGCCCTGCCGGGGCCCGGTaGCTCGCAGGCTCCTGGACACTCGCGTCCACGCAG | + |
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Preference number: 6 (lower is better) Translates to: SGSRAGCPAGAR*LAGSWTLASTQ Trigger: CTGCGTGGACGCGAGTGTCCAGGAGCCTGCGAGCAACCGGGCCCCGGCAGGGCAGCCCGCGCGACTGCCACT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS GCA 72 bp | AGGGCTCCGGAGCCAGGTAGAACTCCAGCTCGATGCTaGCGCCGTCGGGGGAAAGGGGGTCAGCCGGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: RAPEPGRTPARC*RRRGKGGQPGA Trigger: CGCTCCCGGCTGACCCCCTTTCCCCCGACGGCGGCAGCATCGAGCTGGAGTTCTACCTGGCTCCGGAGCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS GCA 72 bp | AGAAGGGCTCCGGAGCCAGGTAGAACTCCAGCTCGATaGTGCCGCCGTCGGGGGAAAGGGGGTCAGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: RRAPEPGRTPAR*CRRRGKGGQPG Trigger: TCCCGGCTGACCCCCTTTCCCCCGACGGCGGCAGCATCGAGCTGGAGTTCTACCTGGCTCCGGAGCCCTTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS CAA 72 bp | ACCGCCTTCTTGCAGCAGGGCAGGGGCTTGATGGGTTaGTCTTCCAGGCACACCCGGCACATCAGCACCATG | + |
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Preference number: 6 (lower is better) Translates to: TAFLQQGRGLMG*SSRHTRHISTM Trigger: CATGGTGCTGATGTGCCGGGTGTGCCTGGAAGACAAACCCATCAAGCCCCTGCCCTGCTGCAAGAAGGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS CAA 72 bp | CACACCCTTCTGTTCTCTGGATATGGATCTTGCACTTaGGACACTTCTGGGCATTTCTCTGCCCGTGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: HTLLFSGYGSCT*DTSGHFSARAQ Trigger: TTGAGCACGGGCAGAGAAATGCCCAGAAGTGTCCAAAGTGCAAGATCCATATCCAGAGAACAGAAGGGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS GCA 72 bp | TATGGTCACACCCTTCTGTTCTCTGGATATGGATCTTaGACTTTGGACACTTCTGGGCATTTCTCTGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: YGHTLLFSGYGS*TLDTSGHFSAR Trigger: ACGGGCAGAGAAATGCCCAGAAGTGTCCAAAGTGCAAGATCCATATCCAGAGAACAGAAGGGTGTGACCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS TCA 72 bp | TCTCTGGGAGGTAGCGATATTTGCATCCAAATATACTaGGGTTTGATGTGTGGTCTCCGAAAAACCGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLGGSDICIQIY*GLMCGLRKTGA Trigger: AGCTCCGGTTTTTCGGAGACCACACATCAAACCTCAGTATATTTGGATGCAAATATCGCTACCTCCCAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS CCA 72 bp | CGATATTTGCATCCAAATATACTGAGGTTTGATGTGTaGTCTCCGAAAAACCGGAGCTGGCGGTATCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RYLHPNILRFDV*SPKNRSWRYLS Trigger: AGAGAGATACCGCCAGCTCCGGTTTTTCGGAGACCACACATCAAACCTCAGTATATTTGGATGCAAATATCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS GCA 72 bp | AGATCAATTGGCAAGTGGGACACTGGATTTTGTATCTaGTTTCTGATCTGGAAGGAGTGGGGATATGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RSIGKWDTGFCI*FLIWKEWGYVL Trigger: AAGGACATATCCCCACTCCTTCCAGATCAGAAAGCAGATACAAAATCCAGTGTCCCACTTGCCAATTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS CCA 72 bp | TTTCTTAAAGGTTGTGAAGTGTTTGCATTGAGGACATaGCTTGGTGCTGGAGTCAATTCGGCCAAGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: FLKGCEVFALRT*LGAGVNSAKFQ Trigger: TTGGAACTTGGCCGAATTGACTCCAGCACCAAGCCATGTCCTCAATGCAAACACTTCACAACCTTTAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS CCA 72 bp | TGCCAAGGAGAGTGGCACTTAAAACACCAGATCAATTaGCAAGTGGGACACTGGATTTTGTATCTGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: CQGEWHLKHQIN*QVGHWILYLLS Trigger: AGAAAGCAGATACAAAATCCAGTGTCCCACTTGCCAATTGATCTGGTGTTTTAAGTGCCACTCTCCTTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS CAA 72 bp | AAACACCAGATCAATTGGCAAGTGGGACACTGGATTTaGTATCTGCTTTCTGATCTGGAAGGAGTGGGGATA | + |
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Preference number: 6 (lower is better) Translates to: KHQINWQVGHWI*YLLSDLEGVGI Trigger: TATCCCCACTCCTTCCAGATCAGAAAGCAGATACAAAATCCAGTGTCCCACTTGCCAATTGATCTGGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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| CDS CAA 72 bp | ATGCCAAGGAGAGTGGCACTTAAAACACCAGATCAATaGGCAAGTGGGACACTGGATTTTGTATCTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: MPRRVALKTPDQ*ASGTLDFVSAF Trigger: GAAAGCAGATACAAAATCCAGTGTCCCACTTGCCAATTGATCTGGTGTTTTAAGTGCCACTCTCCTTGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081989.8 |
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