Pregenerated sensors for RNF215 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003581Ensembl transcript IDs: ENSMUST00000003677.11, ENSMUST00000124670.2, ENSMUST00000145705.8
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTTCTCCTTGCCTGCTGGGTCCGGCTCTGTGTTCAGCCTGGAGCTaGGAGGCCCTTCTACCCGCCATGGGCATGGTGGGACCTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: ISPCLLGPALCSAWS*EALLPAMGMVGPFL Trigger: AAGGAAAGGTCCCACCATGCCCATGGCGGGTAGAAGGGCCTCCCAGCTCCAGGCTGAACACAGAGCCGGACCCAGCAGGCAAGGAGAAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CCA 90 bp | TTAATGATTTCTCCTTGCCTGCTGGGTCCGGCTCTGTGTTCAGCCTaGAGCTGGGAGGCCCTTCTACCCGCCATGGGCATGGTGGGACCT | + |
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Preference number: 1 (lower is better) Translates to: LMISPCLLGPALCSA*SWEALLPAMGMVGP Trigger: AGGTCCCACCATGCCCATGGCGGGTAGAAGGGCCTCCCAGCTCCAGGCTGAACACAGAGCCGGACCCAGCAGGCAAGGAGAAATCATTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CCA 90 bp | TGGTTTCTAAGGCCTCTGAACCCAGCCAGCCTGGAAGAACTCAGCTaGACAGGCAGCAGGTCACGGAGCAGGCTCACTTTAAAGTCATTG | + |
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Preference number: 1 (lower is better) Translates to: WFLRPLNPASLEELS*TGSRSRSRLTLKSL Trigger: CAATGACTTTAAAGTGAGCCTGCTCCGTGACCTGCTGCCTGTCCAGCTGAGTTCTTCCAGGCTGGCTGGGTTCAGAGGCCTTAGAAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR TCA 90 bp | GGTGTAATGGCCGTATGTTCTTCCCAGAGTTGTGGGAGCCGCCTATaGGGACAGACACAAATACCCCAGGTTTGCAGAGAAGGGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: GVMAVCSSQSCGSRL*GQTQIPQVCREGLL Trigger: TAAGAGCCCTTCTCTGCAAACCTGGGGTATTTGTGTCTGTCCTCATAGGCGGCTCCCACAACTCTGGGAAGAACATACGGCCATTACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGTGTTCAGCCTGGAGCTGGGAGGCCCTTCTACCCGCCATGGGCATGGTGGGGTCCGTCCCGAACTaGAGACTTTCCACTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ALCSAWSWEALLPAMGMVGSVPN*RLSTGA Trigger: TGCCCCAGTGGAAAGTCTGCAGTTCGGGACGGACCC...CACCATGCCCATGGCGGGTAGAAGGGCCTCCCAGCTCCAGGCTGAACACAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATCTTTCCGCTCTGTGTTCAGCCTaGAGCTGGGAGGCCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: PGLKDRFLPVGPMATHLSALCSA*SWEALL Trigger: TAGAAGGGCCTCCCAGCTCCAGGCTGAACACAGAGC...GGAAAGATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CAA 90 bp | AGCTGGACAGGCAGCAGGTCACGGAGCAGGCTCACTTTAAAGTCATaGATCAGGCCCTGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SWTGSRSRSRLTLKS*IRPWPERQVPASGS Trigger: GGACCCACTGGCAGGAACCTGTCTTTCAGGCCAGGGCCTGATCAATGACTTTAAAGTGAGCCTGCTCCGTGACCTGCTGCCTGTCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR-3UTR CCA 90 bp | AGGCCCTGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATCTTTCTTCCCAGAGTTGTaGGAGCCGCCTATGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: RPWPERQVPASGSHGHTSFFPEL*EPPMRT Trigger: TGTCCTCATAGGCGGCTCCCACAACTCTGGGAAGAA...AGATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCAGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR-3UTR CCA 90 bp | ACCCCAGGTTTGCAGAGAAGGGCTCTTAATGATTTCTCCTTGCCTGCTGGGTCCGCCCACAGGGCTAGCTaGTCTGTCCATCCCACTCTC | + |
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Preference number: 2 (lower is better) Translates to: TPGLQRRALNDFSLPAGSAHRAS*SVHPTL Trigger: GAGAGTGGGATGGACAGACCAGCTAGCCCTGTGGGC...GGACCCAGCAGGCAAGGAGAAATCATTAAGAGCCCTTCTCTGCAAACCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CAA 90 bp | ACAAATACCCCAGGTTTGCAGAGAAGGGCTCTTAATGATTTCTCCTaGCCTGCTGGGTCCGGCTCTGTGTTCAGCCTGGAGCTGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: TNTPGLQRRALNDFS*PAGSGSVFSLELGG Trigger: GCCTCCCAGCTCCAGGCTGAACACAGAGCCGGACCCAGCAGGCAAGGAGAAATCATTAAGAGCCCTTCTCTGCAAACCTGGGGTATTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR-3UTR CCA 90 bp | AAGAAATACAGCACTAGATGGTTTCTAAGGCCTCTGAACCCAGCCAGCCTGGAATGTTCAGCCTGGAGCTaGGAGGCCCTTCTACCCGCC | + |
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Preference number: 2 (lower is better) Translates to: KKYSTRWFLRPLNPASLECSAWS*EALLPA Trigger: GGCGGGTAGAAGGGCCTCCCAGCTCCAGGCTGAACA...TTCCAGGCTGGCTGGGTTCAGAGGCCTTAGAAACCATCTAGTGCTGTATTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CAA 90 bp | GAGTTGTGGGAGCCGCCTATGAGGACAGACACAAATACCCCAGGTTaGCAGAGAAGGGCTCTTAATGATTTCTCCTTGCCTGCTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: ELWEPPMRTDTNTPG*QRRALNDFSLPAGS Trigger: GGACCCAGCAGGCAAGGAGAAATCATTAAGAGCCCTTCTCTGCAAACCTGGGGTATTTGTGTCTGTCCTCATAGGCGGCTCCCACAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATCTTTCCCCCAAATACCCCAGGTTTaGAGAGAAGGGCTCTTAATG | + |
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Preference number: 2 (lower is better) Translates to: WPERQVPASGSHGHTSFPQIPQV*REGLLM Trigger: CATTAAGAGCCCTTCTCTGCAAACCTGGGGTATTTG...GGGGAAAGATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR-3UTR CCA 90 bp | TTTAGCCCAACCAAGAAATACAGCACTAGATGGTTTCTAAGGCCTCTGAACCCACTGGAAGAACTCAGCTaGACAGGCAGCAGGTCACGG | + |
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Preference number: 2 (lower is better) Translates to: FSPTKKYSTRWFLRPLNPLEELS*TGSRSR Trigger: CCGTGACCTGCTGCCTGTCCAGCTGAGTTCTTCCAG...TGGGTTCAGAGGCCTTAGAAACCATCTAGTGCTGTATTTCTTGGTTGGGCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CCA 72 bp | CCTGGAGCTGGGAGGCCCTTCTACCCGCCATGGGCATaGTGGGACCTTTCCTTTGCCCACAGGGCTAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: PGAGRPFYPPWA*WDLSFAHRASW Trigger: CCAGCTAGCCCTGTGGGCAAAGGAAAGGTCCCACCATGCCCATGGCGGGTAGAAGGGCCTCCCAGCTCCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CCA 72 bp | TCTCCTTGCCTGCTGGGTCCGGCTCTGTGTTCAGCCTaGAGCTGGGAGGCCCTTCTACCCGCCATGGGCATG | + |
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Preference number: 3 (lower is better) Translates to: SPCLLGPALCSA*SWEALLPAMGM Trigger: CATGCCCATGGCGGGTAGAAGGGCCTCCCAGCTCCAGGCTGAACACAGAGCCGGACCCAGCAGGCAAGGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CCA 72 bp | GTTCAGCCTGGAGCTGGGAGGCCCTTCTACCCGCCATaGGCATGGTGGGACCTTTCCTTTGCCCACAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: VQPGAGRPFYPP*AWWDLSFAHRA Trigger: AGCCCTGTGGGCAAAGGAAAGGTCCCACCATGCCCATGGCGGGTAGAAGGGCCTCCCAGCTCCAGGCTGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR TCA 72 bp | CAGGCTCACTTTAAAGTCATTGATCAGGCCCTGGCCTaGAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCA | + |
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Preference number: 3 (lower is better) Translates to: QAHFKVIDQALA*KTGSCQWVPWP Trigger: TGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCAGGGCCTGATCAATGACTTTAAAGTGAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR GCA 72 bp | CAGGTTTGCAGAGAAGGGCTCTTAATGATTTCTCCTTaGCTGCTGGGTCCGGCTCTGTGTTCAGCCTGGAGC | + |
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Preference number: 3 (lower is better) Translates to: QVCREGLLMISP*LLGPALCSAWS Trigger: GCTCCAGGCTGAACACAGAGCCGGACCCAGCAGGCAAGGAGAAATCATTAAGAGCCCTTCTCTGCAAACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CCA 72 bp | CGGAGCAGGCTCACTTTAAAGTCATTGATCAGGCCCTaGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: RSRLTLKSLIRP*PERQVPASGSH Trigger: ATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCAGGGCCTGATCAATGACTTTAAAGTGAGCCTGCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR TCA 72 bp | GCCGTATGTTCTTCCCAGAGTTGTGGGAGCCGCCTATaGGGACAGACACAAATACCCCAGGTTTGCAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: AVCSSQSCGSRL*GQTQIPQVCRE Trigger: TTCTCTGCAAACCTGGGGTATTTGTGTCTGTCCTCATAGGCGGCTCCCACAACTCTGGGAAGAACATACGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR GCA 90 bp | CTGGAGCTGGGAGGCCCTTCTACCCGCCATGGGCATGGTGGGACCTTTCCTTTGGTAGCCTGGGTCCTCTaGAGAAGGGCCTCCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: LELGGPSTRHGHGGTFPLVAWVL*RRASNS Trigger: GCTGTTGGAGGCCCTTCTGCAGAGGACCCAGGCTAC...CAAAGGAAAGGTCCCACCATGCCCATGGCGGGTAGAAGGGCCTCCCAGCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR GCA 90 bp | TGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATCTTTCCCCTGGAAGGCTGTGTGCTaGCCTGCTCAGCCGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: WPERQVPASGSHGHTSFPWKAVC*PAQPAA Trigger: CGCTGCCGGCTGAGCAGGGCAGCACACAGCCTTCCA...GGGGAAAGATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR TCA 90 bp | TACCCGCCATGGGCATGGTGGGACCTTTCCTTTGCCCACAGGGCTAGCTGGTCTGGTTCCCCAGGACGTTaGACTTGCACAGTGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: YPPWAWWDLSFAHRASWSGSPGR*TCTVGR Trigger: CCTGCCCACTGTGCAAGTTCAACGTCCTGGGGAACC...AGACCAGCTAGCCCTGTGGGCAAAGGAAAGGTCCCACCATGCCCATGGCGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR GCA 90 bp | AAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATCTTTCCCCTCATCTAGGCTGTGTGCTGCCCTaGTCAGCCGGCAGCGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: KDRFLPVGPMATHLSPHLGCVLP*SAGSAE Trigger: CTCGGCGCTGCCGGCTGAGCAGGGCAGCACACAGCC...TAGATGAGGGGAAAGATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CCA 90 bp | CTGGAGCTGGGAGGCCCTTCTACCCGCCATGGGCATGGTGGGACCTTTCCTTTGGGCCTCAGCAGAAGCTaGGATACATCCAGCTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LELGGPSTRHGHGGTFPLGLSRS*DTSSSR Trigger: CCGAGAGCTGGATGTATCCCAGCTTCTGCTGAGGCC...CAAAGGAAAGGTCCCACCATGCCCATGGCGGGTAGAAGGGCCTCCCAGCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CAA 72 bp | CCTTCTACCCGCCATGGGCATGGTGGGACCTTTCCTTaGCCCACAGGGCTAGCTGGTCTGTCCATCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: PSTRHGHGGTFP*PTGLAGLSIPL Trigger: GAGTGGGATGGACAGACCAGCTAGCCCTGTGGGCAAAGGAAAGGTCCCACCATGCCCATGGCGGGTAGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR TCA 90 bp | AGGCCCTTCTACCCGCCATGGGCATGGTGGGACCTTTCCTTTGCCCACAGGGCTCCACTCGATGTTGGCTaGAAGGGACTCTCCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: RPFYPPWAWWDLSFAHRAPLDVG*KGLSTA Trigger: AGCAGTGGAGAGTCCCTTTCAGCCAACATCGAGTGG...AGCCCTGTGGGCAAAGGAAAGGTCCCACCATGCCCATGGCGGGTAGAAGGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR GCA 90 bp | CCTGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATCTTTCCATGGCGTTCCATAGCTaGTGCAGGGGCTTCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PGLKDRFLPVGPMATHLSMAFHS*CRGFCS Trigger: GGAGCAGAAGCCCCTGCAGCAGCTATGGAACGCCAT...GGAAAGATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CCA 90 bp | TCAGGCCCTGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATTTCTCTTGGTGGAACTaGGCGACCTGCTCTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SGPGLKDRFLPVGPMATHFSWWN*ATCSLP Trigger: GGGCAAAGAGCAGGTCGCCCAGTTCCACCAAGAGAA...ATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCAGGGCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CCA 90 bp | AGGCCCTGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATCTGCTCGACGCATCTGCTaGACCAGAGCCTTGGGATAT | + |
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Preference number: 4 (lower is better) Translates to: RPWPERQVPASGSHGHTSARRIC*TRALGY Trigger: ATATCCCAAGGCTCTGGTCCAGCAGATGCGTCGAGC...AGATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCAGGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR TCA 90 bp | AGGCCCTTCTACCCGCCATGGGCATGGTGGGACCTTTCCTTTGCCCACAGGGCTCCTCCAACAGCTTGGTaGCATTGGAGGAGTAATGGA | + |
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Preference number: 4 (lower is better) Translates to: RPFYPPWAWWDLSFAHRAPPTAW*HWRSNG Trigger: TCCATTACTCCTCCAATGTCACCAAGCTGTTGGAGG...AGCCCTGTGGGCAAAGGAAAGGTCCCACCATGCCCATGGCGGGTAGAAGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR TCA 90 bp | AGGTCACGGAGCAGGCTCACTTTAAAGTCATTGATCAGGCCCTGGCCTGAAAGATTCTGCTCCTGGGCCTaGGCACCTCCCAGGCACACC | + |
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Preference number: 4 (lower is better) Translates to: RSRSRLTLKSLIRPWPERFCSWA*APPRHT Trigger: GGTGTGCCTGGGAGGTGCTCAGGCCCAGGAGCAGAA...TCTTTCAGGCCAGGGCCTGATCAATGACTTTAAAGTGAGCCTGCTCCGTGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR GCA 90 bp | CATGGTGGGACCTTTCCTTTGCCCACAGGGCTAGCTGGTCTGTCCATCCCACTCGGGCGACCTGCTCTTTaGCCACATATGCCACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: HGGTFPLPTGLAGLSIPLGRPAL*PHMPLQ Trigger: TTGCAGTGGCATATGTGGGCAAAGAGCAGGTCGCCC...GAGTGGGATGGACAGACCAGCTAGCCCTGTGGGCAAAGGAAAGGTCCCACCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CCA 90 bp | CTCTTAATGATTTCTCCTTGCCTGCTGGGTCCGGCTCTGTGTTCAGCCTGGAGCCCTCCAGGCTCCTGCTaGTTCTGTCTTGACGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLMISPCLLGPALCSAWSPPGSC*FCLDAC Trigger: GCAGGCGTCAAGACAGAACCAGCAGGAGCCTGGAGG...GCTCCAGGCTGAACACAGAGCCGGACCCAGCAGGCAAGGAGAAATCATTAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR GCA 90 bp | TCAGGCCCTGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATCTCTTTGCCCACATATaGCACTGCAATCCAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: SGPGLKDRFLPVGPMATHLFAHI*HCNPAI Trigger: GATGGCTGGATTGCAGTGGCATATGTGGGCAAAGAG...ATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCAGGGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CCA 90 bp | GGGACCTTTCCTTTGCCCACAGGGCTAGCTGGTCTGTCCATCCCACTCTCCTGTCTGTACACAGGAGCATaGCCACAAGCAAGATGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GTFPLPTGLAGLSIPLSCLYTGA*PQARWR Trigger: ACGCCATCTTGCTTGTGGCCATGCTCCTGTGTACAG...ACAGGAGAGTGGGATGGACAGACCAGCTAGCCCTGTGGGCAAAGGAAAGGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CCA 90 bp | TGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATCTTTCCCCTCCACACAGTCTCGGTaGAACTCATGCTTACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: WPERQVPASGSHGHTSFPSTQSR*NSCLQG Trigger: GCCCTGTAAGCATGAGTTCCACCGAGACTGTGTGGA...GGGGAAAGATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CAA 72 bp | GGCAGCAGGTCACGGAGCAGGCTCACTTTAAAGTCATaGATCAGGCCCTGGCCTGAAAGACAGGTTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GSRSRSRLTLKS*IRPWPERQVPA Trigger: GGCAGGAACCTGTCTTTCAGGCCAGGGCCTGATCAATGACTTTAAAGTGAGCCTGCTCCGTGACCTGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CCA 90 bp | CTCTTAATGATTTCTCCTTGCCTGCTGGGTCCGGCTCTGTGTTCAGCCTGGAGCGCTGGACCAGAGCCTTaGGATATGCCTTCTGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: LLMISPCLLGPALCSAWSAGPEP*DMPSGY Trigger: GTAGCCAGAAGGCATATCCCAAGGCTCTGGTCCAGC...GCTCCAGGCTGAACACAGAGCCGGACCCAGCAGGCAAGGAGAAATCATTAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CCA 90 bp | CATGGTGGGACCTTTCCTTTGCCCACAGGGCTAGCTGGTCTGTCCATCCCACTCATGGAGAACAATCACTaGCCTCAGCAGAAGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: HGGTFPLPTGLAGLSIPLMENNH*PQQKLG Trigger: TCCCAGCTTCTGCTGAGGCCAGTGATTGTTCTCCAT...GAGTGGGATGGACAGACCAGCTAGCCCTGTGGGCAAAGGAAAGGTCCCACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR GCA 90 bp | AAGAAATACAGCACTAGATGGTTTCTAAGGCCTCTGAACCCAGCCAGCCTGGAATGGCCTCCAGGCTCCTaGTGGTTCTGTCTTGACGCC | + |
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Preference number: 4 (lower is better) Translates to: KKYSTRWFLRPLNPASLEWPPGS*WFCLDA Trigger: GGCGTCAAGACAGAACCAGCAGGAGCCTGGAGGCCA...TTCCAGGCTGGCTGGGTTCAGAGGCCTTAGAAACCATCTAGTGCTGTATTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CCA 90 bp | AAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATCTTTCCCCTCATCTAGCTTCCACTCGATGTTaGCTGAAAGGGACTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: KDRFLPVGPMATHLSPHLASTRC*LKGTLH Trigger: GTGGAGAGTCCCTTTCAGCCAACATCGAGTGGAAGC...TAGATGAGGGGAAAGATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CCA 90 bp | AAGAAATACAGCACTAGATGGTTTCTAAGGCCTCTGAACCCAGCCAGCCTGGAATTGAACAAATCCTCCTaGCCTCCAGGCTCCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KKYSTRWFLRPLNPASLELNKSS*PPGSCW Trigger: CCAGCAGGAGCCTGGAGGCCAGGAGGATTTGTTCAA...TTCCAGGCTGGCTGGGTTCAGAGGCCTTAGAAACCATCTAGTGCTGTATTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| 3UTR CAA 72 bp | GAGCCGCCTATGAGGACAGACACAAATACCCCAGGTTaGCAGAGAAGGGCTCTTAATGATTTCTCCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: EPPMRTDTNTPG*QRRALNDFSLP Trigger: AGGCAAGGAGAAATCATTAAGAGCCCTTCTCTGCAAACCTGGGGTATTTGTGTCTGTCCTCATAGGCGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR TCA 90 bp | AAGAAATACAGCACTAGATGGTTTCTAAGGCCTCTGAACCCAGCCAGCCTGGAATTCTGGCTACTGCCTTaGTTCTCTTGGTGGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: KKYSTRWFLRPLNPASLEFWLLP*FSWWNW Trigger: CCAGTTCCACCAAGAGAATCAAGGCAGTAGCCAGAA...TTCCAGGCTGGCTGGGTTCAGAGGCCTTAGAAACCATCTAGTGCTGTATTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR GCA 90 bp | TTTAGCCCAACCAAGAAATACAGCACTAGATGGTTTCTAAGGCCTCTGAACCCATCTCGGTGGAACTCATaGTTACAGGGCAGTACCCGG | + |
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Preference number: 4 (lower is better) Translates to: FSPTKKYSTRWFLRPLNPSRWNS*LQGSTR Trigger: CCGGGTACTGCCCTGTAAGCATGAGTTCCACCGAGA...TGGGTTCAGAGGCCTTAGAAACCATCTAGTGCTGTATTTCTTGGTTGGGCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR TCA 90 bp | TCAGTAACATTTAGCCCAACCAAGAAATACAGCACTAGATGGTTTCTAAGGCCTCACTGTGGTTTAAGATaGGGAGAAGCAGGGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SVTFSPTKKYSTRWFLRPHCGLR*GEAGQR Trigger: CCTCTGCCCTGCTTCTCCTCATCTTAAACCACAGTG...AGGCCTTAGAAACCATCTAGTGCTGTATTTCTTGGTTGGGCTAAATGTTACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR GCA 90 bp | TTTAGCCCAACCAAGAAATACAGCACTAGATGGTTTCTAAGGCCTCTGAACCCAATGCCTTCTGGCTACTaGCTTGATTCTCTTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FSPTKKYSTRWFLRPLNPMPSGY*LDSLGG Trigger: TCCACCAAGAGAATCAAGGCAGTAGCCAGAAGGCAT...TGGGTTCAGAGGCCTTAGAAACCATCTAGTGCTGTATTTCTTGGTTGGGCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS GCA 90 bp | CCGTCTTCCGGACCGATTCTGACGCCCTCCAAAACCAAGGCGTCCTaGCGCGGCAGTTTCACATCCACTCGCACTGAGCGGGCTCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: PSSGPILTPSKTKAS*RGSFTSTRTERAPP Trigger: GGGCGGAGCCCGCTCAGTGCGAGTGGATGTGAAACTGCCGCGGCAGGACGCCTTGGTTTTGGAGGGCGTCAGAATCGGTCCGGAAGACGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003677.11 ENSMUST00000124670.2 ENSMUST00000145705.8 |
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| CDS-3UTR CAA 90 bp | GGCTCTGTGTTCAGCCTGGAGCTGGGAGGCCCTTCTACCCGCCATGGGCATGGTCCCAGGACGTTGAACTaGCACAGTGGGCAGGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: GSVFSLELGGPSTRHGHGPRTLN*HSGQVC Trigger: ACAGACCTGCCCACTGTGCAAGTTCAACGTCCTGGG...ACCATGCCCATGGCGGGTAGAAGGGCCTCCCAGCTCCAGGCTGAACACAGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CAA 90 bp | GGCTCTGTGTTCAGCCTGGAGCTGGGAGGCCCTTCTACCCGCCATGGGCATGGTTGCTGGACCAGAGCCTaGGGATATGCCTTCTGGCTA | + |
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Preference number: 5 (lower is better) Translates to: GSVFSLELGGPSTRHGHGCWTRA*GYAFWL Trigger: TAGCCAGAAGGCATATCCCAAGGCTCTGGTCCAGCA...ACCATGCCCATGGCGGGTAGAAGGGCCTCCCAGCTCCAGGCTGAACACAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CAA 90 bp | CATGGTGGGACCTTTCCTTTGCCCACAGGGCTAGCTGGTCTGTCCATCCCACTCCCTGCTGGTTCTGTCTaGACGCCTGCCGTTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: HGGTFPLPTGLAGLSIPLPAGSV*TPAVGP Trigger: AGGCCCAACGGCAGGCGTCAAGACAGAACCAGCAGG...GAGTGGGATGGACAGACCAGCTAGCCCTGTGGGCAAAGGAAAGGTCCCACCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CAA 90 bp | GGGACCTTTCCTTTGCCCACAGGGCTAGCTGGTCTGTCCATCCCACTCTCCTGTCGGCAGCGCCGAGTCTaGAGAGATGCTAGCCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: GTFPLPTGLAGLSIPLSCRQRRV*RDASLR Trigger: TCGGAGGCTAGCATCTCTCAAGACTCGGCGCTGCCG...ACAGGAGAGTGGGATGGACAGACCAGCTAGCCCTGTGGGCAAAGGAAAGGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CAA 90 bp | AGCTGGGAGGCCCTTCTACCCGCCATGGGCATGGTGGGACCTTTCCTTTGCCCATGGTTCCCCAGGACGTaGAACTTGCACAGTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SWEALLPAMGMVGPFLCPWFPRT*NLHSGQ Trigger: CTGCCCACTGTGCAAGTTCAACGTCCTGGGGAACCA...TGGGCAAAGGAAAGGTCCCACCATGCCCATGGCGGGTAGAAGGGCCTCCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CAA 90 bp | AACCCAGCCAGCCTGGAAGAACTCAGCTGGACAGGCAGCAGGTCACGGAGCAGGACTGCCTTGATTCTCTaGGTGGAACTGGGCGACCTG | + |
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Preference number: 5 (lower is better) Translates to: NPASLEELSWTGSRSRSRTALIL*VELGDL Trigger: CAGGTCGCCCAGTTCCACCAAGAGAATCAAGGCAGT...CCTGCTCCGTGACCTGCTGCCTGTCCAGCTGAGTTCTTCCAGGCTGGCTGGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS CCA 90 bp | CCTGAACCACAAGTCCTGTACACAGGAGCATGGCCACAAGCAAGATaGCGTTCCATAGCTGCTGCAGGGGCTTCTGCTCCTGGGCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: PEPQVLYTGAWPQAR*RSIAAAGASAPGPE Trigger: CTCAGGCCCAGGAGCAGAAGCCCCTGCAGCAGCTATGGAACGCCATCTTGCTTGTGGCCATGCTCCTGTGTACAGGACTTGTGGTTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS-3UTR CAA 90 bp | TGTTCAGCCTGGAGCTGGGAGGCCCTTCTACCCGCCATGGGCATGGTGGGACCTCTTCTGGCTACTGCCTaGATTCTCTTGGTGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: CSAWSWEALLPAMGMVGPLLATA*ILLVEL Trigger: CAGTTCCACCAAGAGAATCAAGGCAGTAGCCAGAAG...AGGTCCCACCATGCCCATGGCGGGTAGAAGGGCCTCCCAGCTCCAGGCTGAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS GCA 90 bp | TTGCCCACATATGCCACTGCAATCCAGCCATCTACGGGTATCTCTTaGTCAGCATCCACGACATCCATCAGCAGCAGGCGGCCACCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LPTYATAIQPSTGIS*SASTTSISSRRPPS Trigger: GCTGGGTGGCCGCCTGCTGCTGATGGATGTCGTGGATGCTGAGCAAGAGATACCCGTAGATGGCTGGATTGCAGTGGCATATGTGGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003677.11 ENSMUST00000145705.8 |
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| CDS-3UTR CAA 90 bp | TCAGGCCCTGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATAGCTTCCACTCGATGTaGGCTGAAAGGGACTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SGPGLKDRFLPVGPMATHSFHSM*AERDSP Trigger: TGGAGAGTCCCTTTCAGCCAACATCGAGTGGAAGCT...ATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCAGGGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS TCA 90 bp | TTTGAACAAATCCTCCTGGCCTCCAGGCTCCTGCTGGTTCTGTCTTaGCGCCTGCCGTTGGGCCTGAACCACAAGTCCTGTACACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FEQILLASRLLLVLS*RLPLGLNHKSCTQE Trigger: CTCCTGTGTACAGGACTTGTGGTTCAGGCCCAACGGCAGGCGTCAAGACAGAACCAGCAGGAGCCTGGAGGCCAGGAGGATTTGTTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS GCA 90 bp | ATTGCTTGTTACAGAAGTAATCTAGACACACAGCACACGTCTCAGTaGCCGGCTCTGGAAGGCTGTGTGCTGCCCTGCTCAGCCGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: IACYRSNLDTQHTSQ*PALEGCVLPCSAGS Trigger: GCTGCCGGCTGAGCAGGGCAGCACACAGCCTTCCAGAGCCGGGCACTGAGACGTGTGCTGTGTGTCTAGATTACTTCTGTAACAAGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS CCA 90 bp | CCAAGTCCTGCCAGCCTCCGTAGCCATCCTTGGAGAGACCACAGGTaGTCCACAATGTCAGCTTCCACTCGATGTTGGCTGAAAGGGACT | + |
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Preference number: 5 (lower is better) Translates to: PSPASLRSHPWRDHR*STMSASTRCWLKGT Trigger: AGTCCCTTTCAGCCAACATCGAGTGGAAGCTGACATTGTGGACCACCTGTGGTCTCTCCAAGGATGGCTACGGAGGCTGGCAGGACTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS CCA 90 bp | AGGCTCCCAGGAAAAGGGCTCGACGCATCTGCTGGACCAGAGCCTTaGGATATGCCTTCTGGCTACTGCCTTGATTCTCTTGGTGGAACT | + |
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Preference number: 5 (lower is better) Translates to: RLPGKGLDASAGPEP*DMPSGYCLDSLGGT Trigger: AGTTCCACCAAGAGAATCAAGGCAGTAGCCAGAAGGCATATCCCAAGGCTCTGGTCCAGCAGATGCGTCGAGCCCTTTTCCTGGGAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003677.11 ENSMUST00000145705.8 |
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| CDS-3UTR CAA 90 bp | TGGCCTGAAAGACAGGTTCCTGCCAGTGGGTCCCATGGCCACACATCTTTCCCCATCTACGGGTATCTCTaGCTCAGCATCCACGACATC | + |
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Preference number: 5 (lower is better) Translates to: WPERQVPASGSHGHTSFPIYGYL*LSIHDI Trigger: GATGTCGTGGATGCTGAGCAAGAGATACCCGTAGAT...GGGGAAAGATGTGTGGCCATGGGACCCACTGGCAGGAACCTGTCTTTCAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS GCA 72 bp | ACACGTCTCAGTGCCCGGCTCTGGAAGGCTGTGTGCTaGCCTGCTCAGCCGGCAGCGCCGAGTCTTGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: TRLSARLWKAVC*PAQPAAPSLER Trigger: TCTCTCAAGACTCGGCGCTGCCGGCTGAGCAGGGCAGCACACAGCCTTCCAGAGCCGGGCACTGAGACGTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS GCA 72 bp | GGACCGATTCTGACGCCCTCCAAAACCAAGGCGTCCTaGCGCGGCAGTTTCACATCCACTCGCACTGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: GPILTPSKTKAS*RGSFTSTRTER Trigger: CCGCTCAGTGCGAGTGGATGTGAAACTGCCGCGGCAGGACGCCTTGGTTTTGGAGGGCGTCAGAATCGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003677.11 ENSMUST00000124670.2 ENSMUST00000145705.8 |
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| CDS CAA 90 bp | TCTGGAAGGCTGTGTGCTGCCCTGCTCAGCCGGCAGCGCCGAGTCTaGAGAGATGCTAGCCTCCGAACCACACGGCGTTTGAACAAATCC | + |
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Preference number: 6 (lower is better) Translates to: SGRLCAALLSRQRRV*RDASLRTTRRLNKS Trigger: GGATTTGTTCAAACGCCGTGTGGTTCGGAGGCTAGCATCTCTCAAGACTCGGCGCTGCCGGCTGAGCAGGGCAGCACACAGCCTTCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS CCA 72 bp | GCAGAGGCTCCCAGGAAAAGGGCTCGACGCATCTGCTaGACCAGAGCCTTGGGATATGCCTTCTGGCTACTG | + |
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Preference number: 6 (lower is better) Translates to: AEAPRKRARRIC*TRALGYAFWLL Trigger: CAGTAGCCAGAAGGCATATCCCAAGGCTCTGGTCCAGCAGATGCGTCGAGCCCTTTTCCTGGGAGCCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003677.11 ENSMUST00000145705.8 |
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| CDS CCA 72 bp | AGCCTCCGAACCACACGGCGTTTGAACAAATCCTCCTaGCCTCCAGGCTCCTGCTGGTTCTGTCTTGACGCC | + |
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Preference number: 6 (lower is better) Translates to: SLRTTRRLNKSS*PPGSCWFCLDA Trigger: GGCGTCAAGACAGAACCAGCAGGAGCCTGGAGGCCAGGAGGATTTGTTCAAACGCCGTGTGGTTCGGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS CAA 90 bp | CAGCGCCGAGTCTTGAGAGATGCTAGCCTCCGAACCACACGGCGTTaGAACAAATCCTCCTGGCCTCCAGGCTCCTGCTGGTTCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: QRRVLRDASLRTTRR*NKSSWPPGSCWFCL Trigger: AAGACAGAACCAGCAGGAGCCTGGAGGCCAGGAGGATTTGTTCAAACGCCGTGTGGTTCGGAGGCTAGCATCTCTCAAGACTCGGCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS CCA 72 bp | GAAAGGGACTCTCCACTGCTGATCTCAGCAGTAGCCTaGGTCCTCTGCAGAAGGGCCTCCAACAGCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: ERDSPLLISAVA*VLCRRASNSLV Trigger: CACCAAGCTGTTGGAGGCCCTTCTGCAGAGGACCCAGGCTACTGCTGAGATCAGCAGTGGAGAGTCCCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS CCA 72 bp | GCCAGCCTCCGTAGCCATCCTTGGAGAGACCACAGGTaGTCCACAATGTCAGCTTCCACTCGATGTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASLRSHPWRDHR*STMSASTRCWL Trigger: CAGCCAACATCGAGTGGAAGCTGACATTGTGGACCACCTGTGGTCTCTCCAAGGATGGCTACGGAGGCTGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS CAA 72 bp | GTCTTGAGAGATGCTAGCCTCCGAACCACACGGCGTTaGAACAAATCCTCCTGGCCTCCAGGCTCCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VLRDASLRTTRR*NKSSWPPGSCW Trigger: CCAGCAGGAGCCTGGAGGCCAGGAGGATTTGTTCAAACGCCGTGTGGTTCGGAGGCTAGCATCTCTCAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS CAA 90 bp | TTTGCCCACATATGCCACTGCAATCCAGCCATCTACGGGTATCTCTaGCTCAGCATCCACGACATCCATCAGCAGCAGGCGGCCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: FAHICHCNPAIYGYL*LSIHDIHQQQAATQ Trigger: CTGGGTGGCCGCCTGCTGCTGATGGATGTCGTGGATGCTGAGCAAGAGATACCCGTAGATGGCTGGATTGCAGTGGCATATGTGGGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003677.11 ENSMUST00000145705.8 |
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| CDS CCA 72 bp | CAAGTCCTGTACACAGGAGCATGGCCACAAGCAAGATaGCGTTCCATAGCTGCTGCAGGGGCTTCTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: QVLYTGAWPQAR*RSIAAAGASAP Trigger: AGGAGCAGAAGCCCCTGCAGCAGCTATGGAACGCCATCTTGCTTGTGGCCATGCTCCTGTGTACAGGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS GCA 72 bp | TATGCCACTGCAATCCAGCCATCTACGGGTATCTCTTaGTCAGCATCCACGACATCCATCAGCAGCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: YATAIQPSTGIS*SASTTSISSRR Trigger: CCGCCTGCTGCTGATGGATGTCGTGGATGCTGAGCAAGAGATACCCGTAGATGGCTGGATTGCAGTGGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003677.11 ENSMUST00000145705.8 |
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| CDS GCA 72 bp | TACAGAAGTAATCTAGACACACAGCACACGTCTCAGTaGCCGGCTCTGGAAGGCTGTGTGCTGCCCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: YRSNLDTQHTSQ*PALEGCVLPCS Trigger: TGAGCAGGGCAGCACACAGCCTTCCAGAGCCGGGCACTGAGACGTGTGCTGTGTGTCTAGATTACTTCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS CAA 90 bp | TTGGAGAGACCACAGGTGGTCCACAATGTCAGCTTCCACTCGATGTaGGCTGAAAGGGACTCTCCACTGCTGATCTCAGCAGTAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LERPQVVHNVSFHSM*AERDSPLLISAVAW Trigger: CCAGGCTACTGCTGAGATCAGCAGTGGAGAGTCCCTTTCAGCCAACATCGAGTGGAAGCTGACATTGTGGACCACCTGTGGTCTCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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| CDS CCA 72 bp | GGAAAAGGGCTCGACGCATCTGCTGGACCAGAGCCTTaGGATATGCCTTCTGGCTACTGCCTTGATTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GKGLDASAGPEP*DMPSGYCLDSL Trigger: AAGAGAATCAAGGCAGTAGCCAGAAGGCATATCCCAAGGCTCTGGTCCAGCAGATGCGTCGAGCCCTTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003677.11 ENSMUST00000145705.8 |
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| CDS CAA 72 bp | ATATGCCACTGCAATCCAGCCATCTACGGGTATCTCTaGCTCAGCATCCACGACATCCATCAGCAGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: ICHCNPAIYGYL*LSIHDIHQQQA Trigger: CGCCTGCTGCTGATGGATGTCGTGGATGCTGAGCAAGAGATACCCGTAGATGGCTGGATTGCAGTGGCATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003677.11 ENSMUST00000145705.8 |
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| CDS CAA 72 bp | CCACAGGTGGTCCACAATGTCAGCTTCCACTCGATGTaGGCTGAAAGGGACTCTCCACTGCTGATCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PQVVHNVSFHSM*AERDSPLLISA Trigger: TGCTGAGATCAGCAGTGGAGAGTCCCTTTCAGCCAACATCGAGTGGAAGCTGACATTGTGGACCACCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003677.11 |
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