RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF213 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070327

Ensembl transcript IDs: ENSMUST00000093902.12, ENSMUST00000131035.10, ENSMUST00000172235.2

Found 1479 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTaGCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGT +
Preference number: 1 (lower is better)
Translates to: FKARRGLTARRVGLS*PLMDHRSSKAKLAS
Trigger: ACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 90 bp AGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTaGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGG +
Preference number: 1 (lower is better)
Translates to: SLCPHFPSHKSHSPY*ELWREVRKTFLSSW
Trigger: CCAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 90 bp TCCTTCTCCACTCTCTGTCCGGTGATCTCAGTGAGTGGTTGGCAGTaGCTCATGGTGGGTTTACATGGTGGGTTGTTCATGAGGCTTTAC +
Preference number: 1 (lower is better)
Translates to: SFSTLCPVISVSGWQ*LMVGLHGGLFMRLY
Trigger: GTAAAGCCTCATGAACAACCCACCATGTAAACCCACCATGAGCCACTGCCAACCACTCACTGAGATCACCGGACAGAGAGTGGAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 90 bp CTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTaGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCAC +
Preference number: 1 (lower is better)
Translates to: LESALFVCPYSHLQC*GENPGLCYGRQVLH
Trigger: GTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR GCA 90 bp GAACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTaGTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTC +
Preference number: 1 (lower is better)
Translates to: ELESALFVCPYSHLQ*WGENPGLCYGRQVL
Trigger: GAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR GCA 90 bp CTAACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTaGTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGA +
Preference number: 1 (lower is better)
Translates to: LTHLYLKSQDMRTGK*FVCLSLFPLAVLGR
Trigger: TCTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 90 bp GCTTACACTAACACATCTTTACTTGAAATCTCAAGACATGAGAACTaGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCT +
Preference number: 1 (lower is better)
Translates to: AYTNTSLLEISRHEN*KVLCLSVPIPTCSA
Trigger: AGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTTAGTGTAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 90 bp GGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTaGCAATTTTCATGCATCTTGCAAACCAAGAGATATGAGTATACT +
Preference number: 1 (lower is better)
Translates to: GFTAFISTLDFLGLV*QFSCILQTKRYEYT
Trigger: AGTATACTCATATCTCTTGGTTTGCAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 90 bp TTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTaGGTTAGTGTGGCAATTTTCATGCATCTTGCAAACCAAGAGATA +
Preference number: 1 (lower is better)
Translates to: LFMRLYSFYQHLGFP*VSVAIFMHLANQEI
Trigger: TATCTCTTGGTTTGCAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR GCA 90 bp GGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATaGATTTTGTACATCACAGTGGGTAATACTACACAGACAGTTATG +
Preference number: 1 (lower is better)
Translates to: GMVNMMQSTLPMLDP*ILYITVGNTTQTVM
Trigger: CATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAAAATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 90 bp ATGAGGCAGTTGACTGACAATCATTCATCAGACTTAAGGAAATTTTaGAATAGGCACATGATCCAGAAACAGCTTGGCTTTGAAAAAGCT +
Preference number: 1 (lower is better)
Translates to: MRQLTDNHSSDLRKF*NRHMIQKQLGFEKA
Trigger: AGCTTTTTCAAAGCCAAGCTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATTGTCAGTCAACTGCCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGAGCCACAGCCCATACTaGGAGCTGTGGAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRSHSPY*ELWREV
Trigger: CACCTCCCTCCACAGCTCCCAGTATGGGCTGTGGCT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAGCCACAGCCCATACTaGGAGCTGTGGAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPSHSPY*ELWREV
Trigger: CACCTCCCTCCACAGCTCCCAGTATGGGCTGTGGCT...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CAA 90 bp GGGCTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTaGGCAAGTTCATTAAGCCCTGTACCCCCAAAAACCTGGGATGCA +
Preference number: 2 (lower is better)
Translates to: GLSCPLMDHRSSKAK*ASSLSPVPPKTWDA
Trigger: TGCATCCCAGGTTTTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCACCATACTGGGAGCTGTaGAGGGAGGTGAGGAAGACC +
Preference number: 2 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPPYWEL*REVRKT
Trigger: GGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGG...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR TCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGGTGGCCATGGTATTTaGGGTAAGAGGCAGTCAGTC +
Preference number: 2 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTGGHGI*GKRQSV
Trigger: GACTGACTGCCTCTTACCTCAAATACCATGGCCACC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR GCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGCTAGGCAAGGGCTCTaGCATGTTCCCAGCACCCAA +
Preference number: 2 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKARQGL*HVPSTQ
Trigger: TTGGGTGCTGGGAACATGGCAGAGCCCTTGCCTAGC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGTTGGCAGTGGCTCATaGTGGGTTTACATGGTGGGT +
Preference number: 2 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTVGSGS*WVYMVG
Trigger: ACCCACCATGTAAACCCACCATGAGCCACTGCCAAC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR TCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGGTGAGTGTAGGCCTTaGATCCAGTCTGTGCCCACA +
Preference number: 2 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKGECRP*IQSVPT
Trigger: TGTGGGCACAGACTGGATTCAAGGCCTACACTCACC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR TCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGCATGAGGCAGTTGACTaGCAATCATTCATCAGACTT +
Preference number: 2 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRHEAVD*QSFIRL
Trigger: AAGTCTGATGAATGATTGTCAGTCAACTGCCTCATG...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACATGGTGGGTTTACATaGTGGGTTGTTCATGAGGCT +
Preference number: 2 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTHGGFT*WVVHEA
Trigger: AGCCTCATGAACAACCCACCATGTAAACCCACCATG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGATCTCAGTGAGTGGTTaGCAGTGGCTCATGGTGGGT +
Preference number: 2 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEISVSG*QWLMVG
Trigger: ACCCACCATGAGCCACTGCCAACCACTCACTGAGAT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR TCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAATGGTGGGTTGTTCATaGGGCTTTACAGCTTTTATC +
Preference number: 2 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTMVGCS*GFTAFI
Trigger: GATAAAAGCTGTAAAGCCTCATGAACAACCCACCAT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACACCTTGGATTTCCTTaGGTTAGTGTGGCAATTTTC +
Preference number: 2 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTHLGFP*VSVAIF
Trigger: GAAAATTGCCACACTAACCCAAGGAAATCCAAGGTG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACATGGTGGGTTTACATaGTGGGTTGTTCATGAGGCT +
Preference number: 2 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKHGGFT*WVVHEA
Trigger: AGCCTCATGAACAACCCACCATGTAAACCCACCATG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAATGAGAACTGGAAAGTaGTTTGTTTGTCTGTCCCTA +
Preference number: 2 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSMRTGK*FVCLSL
Trigger: TAGGGACAGACAAACAAAGCACTTTCCAGTTCTCAT...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGACTTAAGGAAATTTTaGAATAGGCACATGATCCAG +
Preference number: 2 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELDLRKF*NRHMIQ
Trigger: CTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR TCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGGTGAGTGTAGGCCTTaGATCCAGTCTGTGCCCACA +
Preference number: 2 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCGECRP*IQSVPT
Trigger: TGTGGGCACAGACTGGATTCAAGGCCTACACTCACC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGTTTGGAATAGGCACATaGTCCAGAAACAGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEFGIGT*SRNSLA
Trigger: AGCCAAGCTGTTTCTGGATCATGTGCCTATTCCAAA...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR TCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGGTGGCCATGGTATTTaGGGTAAGAGGCAGTCAGTC +
Preference number: 2 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCGGHGI*GKRQSV
Trigger: GACTGACTGCCTCTTACCTCAAATACCATGGCCACC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCATCTCAGTGAGTGGTTaGCAGTGGCTCATGGTGGGT +
Preference number: 2 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCISVSG*QWLMVG
Trigger: ACCCACCATGAGCCACTGCCAACCACTCACTGAGAT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGTTGGCAGTGGCTCATaGTGGGTTTACATGGTGGGT +
Preference number: 2 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHVGSGS*WVYMVG
Trigger: ACCCACCATGTAAACCCACCATGAGCCACTGCCAAC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGGTGAGTGTAGGCCTTaGATCCAGTCTGTGCCCACA +
Preference number: 2 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEGECRP*IQSVPT
Trigger: TGTGGGCACAGACTGGATTCAAGGCCTACACTCACC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGTCCCTATTCCCACTTaGAGTGCTGGGGAGAGAACC +
Preference number: 2 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEVPIPT*SAGERT
Trigger: GGTTCTCTCCCCAGCACTGCAAGTGGGAATAGGGAC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCCATACTGGGAGCTGTaGAGGGAGGTGAGGAAGACC +
Preference number: 2 (lower is better)
Translates to: NTSLLEISRHENWKVLCLPYWEL*REVRKT
Trigger: GGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGGTTCCAGCTCACCAGTaGGCTCATCCTTCTCCACTC +
Preference number: 2 (lower is better)
Translates to: NTSLLEISRHENWKVLCLVPAHQ*AHPSPL
Trigger: GAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAAC...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTTCCTTGGGTTAGTGTaGCAATTTTCATGCATCTTG +
Preference number: 2 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHFLGLV*QFSCIL
Trigger: CAAGATGCATGAAAATTGCCACACTAACCCAAGGAA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCATGAGGCAGTTGACTaGCAATCATTCATCAGACTT +
Preference number: 2 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIHEAVD*QSFIRL
Trigger: AAGTCTGATGAATGATTGTCAGTCAACTGCCTCATG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCATGAGGCAGTTGACTaGCAATCATTCATCAGACTT +
Preference number: 2 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEHEAVD*QSFIRL
Trigger: AAGTCTGATGAATGATTGTCAGTCAACTGCCTCATG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGTTCCTTGGGTTAGTGTaGCAATTTTCATGCATCTTG +
Preference number: 2 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEFLGLV*QFSCIL
Trigger: CAAGATGCATGAAAATTGCCACACTAACCCAAGGAA...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR TCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGGAAACAGCTTGGCTTTaGAAAAGCTATCACATTGTA +
Preference number: 2 (lower is better)
Translates to: NTSLLEISRHENWKVLCLETAWL*KSYHIV
Trigger: TACAATGTGATAGCTTTTTCAAAGCCAAGCTGTTTC...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR GCA 72 bp AGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTaGCCTCTGATGGATCACAGGAGCTCCAAGGCCAAG +
Preference number: 3 (lower is better)
Translates to: RRGLTARRVGLS*PLMDHRSSKAK
Trigger: CTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 72 bp CCTTCACACAAAAGCCACAGCCCATACTGGGAGCTGTaGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: PSHKSHSPYWEL*REVRKTFLSSW
Trigger: CCAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTGTGGCTTTTGTGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAGATCTCAGTGAGTGGTaGGCAGTGGCTCATGGTGGG +
Preference number: 3 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPDLSEW*AVAHGG
Trigger: CCCACCATGAGCCACTGCCAACCACTCACTGAGATC...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR GCA 72 bp AGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTaGTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGG +
Preference number: 3 (lower is better)
Translates to: SALFVCPYSHLQ*WGENPGLCYGR
Trigger: CCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 72 bp GCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTaGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAA +
Preference number: 3 (lower is better)
Translates to: ALFVCPYSHLQC*GENPGLCYGRQ
Trigger: TTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAGAACTGGAAAGTGCTTaGTTTGTCTGTCCCTATTCC +
Preference number: 3 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSELESA*FVCPYS
Trigger: GGAATAGGGACAGACAAACAAAGCACTTTCCAGTTC...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR GCA 72 bp CATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTaGCCACACTTTCCTTCACACAAAAGCCACAGCCCA +
Preference number: 3 (lower is better)
Translates to: HCRVSVGLESSL*PHFPSHKSHSP
Trigger: TGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR GCA 72 bp TGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTaGAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATG +
Preference number: 3 (lower is better)
Translates to: WKVLCLSVPIPT*SAGERTQGFAM
Trigger: CATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGAGAAACAGCTTGGCTTaGAAAAAGCTATCACATTGT +
Preference number: 3 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRRNSLA*KKLSHC
Trigger: ACAATGTGATAGCTTTTTCAAAGCCAAGCTGTTTCT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACTTAGTGCAGTTCTCTaGTTCCTTCTGGAATGTTCA +
Preference number: 3 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTLSAVL*FLLECS
Trigger: TGAACATTCCAGAAGGAACAAGAGAACTGCACTAAG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAATGTTCATGAGGCAGTaGACTGACAATCATTCATCA +
Preference number: 3 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSMFMRQ*TDNHSS
Trigger: TGATGAATGATTGTCAGTCAACTGCCTCATGAACAT...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 72 bp GAGTGGTTGGCAGTGGCTCATGGTGGGTTTACATGGTaGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCA +
Preference number: 3 (lower is better)
Translates to: EWLAVAHGGFTW*VVHEALQLLSA
Trigger: TGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCACCATGTAAACCCACCATGAGCCACTGCCAACCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGCTTTTATCAGCACCTaGGATTTCCTTGGGTTAGTG +
Preference number: 3 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEAFIST*DFLGLV
Trigger: CACTAACCCAAGGAAATCCAAGGTGCTGATAAAAGC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAGAAACAGCTTGGCTTaGAAAAAGCTATCACATTGT +
Preference number: 3 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPRNSLA*KKLSHC
Trigger: ACAATGTGATAGCTTTTTCAAAGCCAAGCTGTTTCT...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 72 bp AGTGAGTGGTTGGCAGTGGCTCATGGTGGGTTTACATaGTGGGTTGTTCATGAGGCTTTACAGCTTTTATCA +
Preference number: 3 (lower is better)
Translates to: SEWLAVAHGGFT*WVVHEALQLLS
Trigger: TGATAAAAGCTGTAAAGCCTCATGAACAACCCACCATGTAAACCCACCATGAGCCACTGCCAACCACTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACAATTTTCATGCATCTaGCAAACCAAGAGATATGAG +
Preference number: 3 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKQFSCI*QTKRYE
Trigger: CTCATATCTCTTGGTTTGCAAGATGCATGAAAATTG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR TCA 72 bp CTCTGCCATGTTCCCAGCACCCAAATACCTCGGATCTaGGCTTACACTAACACATCTTTACTTGAAATCTCA +
Preference number: 3 (lower is better)
Translates to: LCHVPSTQIPRI*AYTNTSLLEIS
Trigger: TGAGATTTCAAGTAAAGATGTGTTAGTGTAAGCTCAGATCCGAGGTATTTGGGTGCTGGGAACATGGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCTGGAAAGTGCTTTGTTaGTCTGTCCCTATTCCCACT +
Preference number: 3 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCWKVLC*SVPIPT
Trigger: AGTGGGAATAGGGACAGACAAACAAAGCACTTTCCA...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGAACTGGAAAGTGCTTaGTTTGTCTGTCCCTATTCC +
Preference number: 3 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCELESA*FVCPYS
Trigger: GGAATAGGGACAGACAAACAAAGCACTTTCCAGTTC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTAGCTCCAAGGCCAAGTaGGCAAGTTCATTAAGCCCT +
Preference number: 3 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCISSKAK*ASSLSP
Trigger: AGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 72 bp AGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTaGGTTAGTGTGGCAATTTTCATGCATCTTGCAAAC +
Preference number: 3 (lower is better)
Translates to: RLYSFYQHLGFP*VSVAIFMHLAN
Trigger: GTTTGCAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTGGAAAGTGCTTTGTTaGTCTGTCCCTATTCCCACT +
Preference number: 3 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIWKVLC*SVPIPT
Trigger: AGTGGGAATAGGGACAGACAAACAAAGCACTTTCCA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 72 bp GCTTTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTaGCAATTTTCATGCATCTTGCAAACCAAGAGATAT +
Preference number: 3 (lower is better)
Translates to: AFISTLDFLGLV*QFSCILQTKRY
Trigger: ATATCTCTTGGTTTGCAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGGCTTTTATCAGCACCTaGGATTTCCTTGGGTTAGTG +
Preference number: 3 (lower is better)
Translates to: NTSLLEISRHENWKVLCLAFIST*DFLGLV
Trigger: CACTAACCCAAGGAAATCCAAGGTGCTGATAAAAGC...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR GCA 72 bp AACATGATGCAGTCTACTTTGCCAATGTTAGATCCATaGATTTTGTACATCACAGTGGGTAATACTACACAG +
Preference number: 3 (lower is better)
Translates to: NMMQSTLPMLDP*ILYITVGNTTQ
Trigger: CTGTGTAGTATTACCCACTGTGATGTACAAAATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CCA 72 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTaGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACT +
Preference number: 3 (lower is better)
Translates to: NTSLLEISRHEN*KVLCLSVPIPT
Trigger: AGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGATGTTCATGAGGCAGTaGACTGACAATCATTCATCA +
Preference number: 3 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEMFMRQ*TDNHSS
Trigger: TGATGAATGATTGTCAGTCAACTGCCTCATGAACAT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR TCA 72 bp TCTTGTTCCTTCTGGAATGTTCATGAGGCAGTTGACTaGCAATCATTCATCAGACTTAAGGAAATTTTGGAA +
Preference number: 3 (lower is better)
Translates to: SCSFWNVHEAVD*QSFIRLKEILE
Trigger: TTCCAAAATTTCCTTAAGTCTGATGAATGATTGTCAGTCAACTGCCTCATGAACATTCCAGAAGGAACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR TCA 72 bp GTGGCAATTTTCATGCATCTTGCAAACCAAGAGATATaGGTATACTACTTAGAAATTAAGGGACTGGGAGAA +
Preference number: 3 (lower is better)
Translates to: VAIFMHLANQEI*VYYLEIKGLGE
Trigger: TTCTCCCAGTCCCTTAATTTCTAAGTAGTATACTCATATCTCTTGGTTTGCAAGATGCATGAAAATTGCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTAGAAACAGCTTGGCTTaGAAAAAGCTATCACATTGT +
Preference number: 3 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIRNSLA*KKLSHC
Trigger: ACAATGTGATAGCTTTTTCAAAGCCAAGCTGTTTCT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCAATTTTCATGCATCTaGCAAACCAAGAGATATGAG +
Preference number: 3 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIQFSCI*QTKRYE
Trigger: CTCATATCTCTTGGTTTGCAAGATGCATGAAAATTG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCAATTTTCATGCATCTaGCAAACCAAGAGATATGAG +
Preference number: 3 (lower is better)
Translates to: NTSLLEISRHENWKVLCLQFSCI*QTKRYE
Trigger: CTCATATCTCTTGGTTTGCAAGATGCATGAAAATTG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGATGCCCAGGCTGGCTaGCCGCACCACCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRDAQAG*PHHPAG
Trigger: CCCAGCAGGGTGGTGCGGCCAGCCAGCCTGGGCATC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGGGGTCAGCCTGGGCTTaGCCTGTAGGAACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLGSAWA*PVGTGC
Trigger: GCAGCCGGTTCCTACAGGGCAAGCCCAGGCTGACCC...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGGCTGCCGCAGAGGGATaGAGCCCAGCCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLAAAEG*SPACLQ
Trigger: CTGCAGACAGGCTGGGCTCCATCCCTCTGCGGCAGC...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACCTGGGAGCCCGAAGTaGGGCAGCGCCGCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSPGSPK*GSAAGV
Trigger: TACTCCTGCGGCGCTGCCTCACTTCGGGCTCCCAGG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGAGCAGCCTGCTGGGGTaGAGCCGCCTGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRSSLLG*SRLLGF
Trigger: AAAACCCAGCAGGCGGCTGCACCCCAGCAGGCTGCT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGTTAGGCTGGCCAGCCTaGAGGCCTTTGGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRLGWPA*RPLGSG
Trigger: GCCACTCCCCAAAGGCCTGCAGGCTGGCCAGCCTAA...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCCCTGCACGGCATCGTaGAAACAGGCCACCCGGTCC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELPCTAS*KQATRS
Trigger: GGACCGGGTGGCCTGTTTCCACGATGCCGTGCAGGG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGGAGCAAGGTTGCTCTaGGCGTCGGTGCGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRGARLL*ASVRSA
Trigger: TGCAGAACGCACCGACGCTCAGAGCAACCTTGCTCC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGTGGCCAGGGCCTCCTaGAGGGTGCTTGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELVARAS*RVLVTK
Trigger: CTTGGTGACAAGCACCCTTCAGGAGGCCCTGGCCAC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCTCAGCACTGCCCCCTaGTCAGTCTTTCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLLSTAP*SVFPSG
Trigger: CCCGGAAGGAAAGACTGAGCAGGGGGCAGTGCTGAG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATCTGTGTCCAGGGGATaGCCAGGCTGGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSSVSRG*PGWLAA
Trigger: TGCGGCCAGCCAGCCTGGGCATCCCCTGGACACAGA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGAGGAAGTCCTCCATCTaGCTGCAGAGGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLRKSSI*LQRAPR
Trigger: CCTGGGAGCCCTCTGCAGGCAGATGGAGGACTTCCT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGAACACCCCGTGGCTCTaGACCCTGAGCAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELNTPWL*TLSRLL
Trigger: GAGCAGCCTGCTCAGGGTGCAGAGCCACGGGGTGTT...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGGGTCAGCCTGGGCTTaGCCTGTAGGAACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTGSAWA*PVGTGC
Trigger: GCAGCCGGTTCCTACAGGGCAAGCCCAGGCTGACCC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGCCGCACCACCCTGCTaGGCTTGGTTCTGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTAAPPC*AWFWGK
Trigger: CTTGCCCCAGAACCAAGCCCAGCAGGGTGGTGCGGC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAAGGGGATGCCCAGGCTaGCTGGCCGCACCACCCTGC +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKRGCPG*LAAPPC
Trigger: GCAGGGTGGTGCGGCCAGCCAGCCTGGGCATCCCCT...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGCCCCTCAAGCACACTaGTCTGAGACTGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRAPQAH*SETGRQ
Trigger: CTGCCTGCCAGTCTCAGACCAGTGTGCTTGAGGGGC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCTTCCTCCTTGTACCTaGCCTCCGGGAGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLLPPCT*PPGDWL
Trigger: CAGCCAGTCTCCCGGAGGCCAGGTACAAGGAGGAAG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGAGATGCGGTCCAGCATaGCCACAGCAGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLRCGPA*PQQPAS
Trigger: AGAAGCAGGCTGCTGTGGTCATGCTGGACCGCATCT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGAAACGGGGAGGCTCCTaGTTGAGCCTCCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRKRGGS*LSLPSM
Trigger: CATGGAAGGGAGGCTCAAGCAGGAGCCTCCCCGTTT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGAGTCCTCCATCTGCCTaGAGAGGGCTCCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELSPPSA*RGLPGA
Trigger: AGCTCCTGGGAGCCCTCTGCAGGCAGATGGAGGACT...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGAGACAGACGGGGTCCTaGGCATCTCCATGGCAGATG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLRQTGS*ASPWQM
Trigger: CATCTGCCATGGAGATGCGCAGGACCCCGTCTGTCT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGCCTTGCCTGGGTCTGTaGACGAGAGTAGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRPCLGL*TRVGPP
Trigger: AGGAGGTCCTACTCTCGTCCACAGACCCAGGCAAGG...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGAGTGCCACCCATCGTaGCCAGATGAGCAAGGCATC +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRECHPS*PDEQGI
Trigger: GATGCCTTGCTCATCTGGCCACGATGGGTGGCACTC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATTCGGGAGCGGGGCCTaGGGCACCAGGGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKFGSGA*GTRGTL
Trigger: CAAAGTGCCCCTGGTGCCCCAGGCCCCGCTCCCGAA...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGACTCCACTGGGTCCATaGCAGGGTCTGTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELTPLGP*QGLCGS
Trigger: GGAGCCACACAGACCCTGCCATGGACCCAGTGGAGT...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGTGCTGATGATACCTTaGGGGGTGGAGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRVLMIP*GVECGL
Trigger: CAGCCCACACTCCACCCCCCAAGGTATCATCAGCAC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGTGCGTTCTGCAGCCTaGCCCTGCAGAGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYVRSAA*PCRGLP
Trigger: CGGCAGCCCTCTGCAGGGTCAGGCTGCAGAACGCAC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCACAAGAGGGACCACGCTaGGCCAGGAGCGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPQEGPR*ARSGRG
Trigger: ACCTCTTCCGCTCCTGGCTCAGCGTGGTCCCTCTTG...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGAGGGCCATCTTACTCTaGATGAACTGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRRAILL*MNWRGW
Trigger: CCAGCCCCTCCAGTTCATGCAGAGTAAGATGGCCCT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGAGCCCCTCGTCAGTATaGCCTGGAGGACTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELSPSSV*PGGLSS
Trigger: TGAGCTCAGTCCTCCAGGGCATACTGACGAGGGGCT...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCAAGGGATTTGGAGCTaGCGGGCTTCCCCACTAGGA +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELQGIWS*RASPLG
Trigger: TCCTAGTGGGGAAGCCCGGCAGCTCCAAATCCCTTG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGTCTCGTCGGCACTCCTaGCCAGCATCTTGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLSRRHS*PASWLA
Trigger: AGCTAACCAAGATGCTGGGCAGGAGTGCCGACGAGA...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACACCCCGTGGCTCTaGACCCTGAGCAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPNTPWL*TLSRLL
Trigger: GAGCAGCCTGCTCAGGGTGCAGAGCCACGGGGTGTT...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGCTCAATTGTGGTCGCTaGGGTGCAGAGCAACACCTC +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRLNCGR*GAEQHL
Trigger: GAGGTGTTGCTCTGCACCCCAGCGACCACAATTGAG...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGACTGCAGAACTCCACTaGGTCCATGGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLTAELH*VHGRVC
Trigger: ACAGACCCTGCCATGGACCCAGTGGAGTTCTGCAGT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGACCCATTGGCATGGATaGCCCTGCTTGGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRTHWHG*PCLEKL
Trigger: GAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCACTGCACCAGCCTGTCTaGAGAGCAGATCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPLHQPV*RADPLS
Trigger: GCTGAGGGGATCTGCTCTTCAGACAGGCTGGTGCAG...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGTCTCATTCTGGTCTCTaGGCATCCCCACAGCACCCT +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELSHSGL*ASPQHP
Trigger: AGGGTGCTGTGGGGATGCTCAGAGACCAGAATGAGA...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGTCACCTGCTGTGCAATaGCTTTCCTGGGAAACACCC +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLSPAVQ*LSWETP
Trigger: GGGTGTTTCCCAGGAAAGTCATTGCACAGCAGGTGA...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACTCCAAGTCCTGGCGTaGACTAGCAGGTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSLQVLA*TSRSSG
Trigger: GCCTGAAGACCTGCTAGTTCACGCCAGGACTTGGAG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGCAGAGGGCTGCCGCTaGCCTCAGTGTGAACGAAGC +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKAEGCR*PQCERS
Trigger: GCTTCGTTCACACTGAGGGCAGCGGCAGCCCTCTGC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGTTCTGCATGCAGGTGTaGAGGAGGGGTAAGATACCC +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLFCMQV*RRGKIP
Trigger: GGGTATCTTACCCCTCCTGCACACCTGCATGCAGAA...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCAGAAGAAGGAGATCTaGAAACGGGGAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELQKKEI*KRGGSC
Trigger: GCAGGAGCCTCCCCGTTTGCAGATCTCCTTCTTCTG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACACGGTGCGCTCGTGTaGACAGGCTCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTHGALV*TGSGRT
Trigger: AGTTCTTCCAGAGCCTGTGCACACGAGCGCACCGTG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGTCTTCCAGCAGGGGGTaGAGAGTCTTCAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELSSSRG*RVFRGI
Trigger: AATGCCCCTGAAGACTCTGCACCCCCTGCTGGAAGA...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAAGACAGACGGGGTCCTaGGCATCTCCATGGCAGATG +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSRQTGS*ASPWQM
Trigger: CATCTGCCATGGAGATGCGCAGGACCCCGTCTGTCT...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCACAGCTTTGGCCGTTaGATCACGGACAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLHSFGR*ITDSLV
Trigger: TACAAGGCTGTCCGTGATGCAACGGCCAAAGCTGTG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGGGTCAGCCTGGGCTTaGCCTGTAGGAACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEGSAWA*PVGTGC
Trigger: GCAGCCGGTTCCTACAGGGCAAGCCCAGGCTGACCC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGTGGTCCAGGAGGCATTaGAATCGGACTCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRWSRRH*NRTPLV
Trigger: AACCAGAGGAGTCCGATTCCAATGCCTCCTGGACCA...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAGGTGCAGCCGCCTGCTaGGTTTTCACAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPGAAAC*VFTAAA
Trigger: TGCAGCAGCTGTGAAAACCCAGCAGGCGGCTGCACC...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAGAGTGCCACCCATCGTaGCCAGATGAGCAAGGCATC +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSECHPS*PDEQGI
Trigger: GATGCCTTGCTCATCTGGCCACGATGGGTGGCACTC...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGGCAACACCTCCGAGTaGCCACACAAGATCAGGTTA +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRGNTSE*PHKIRL
Trigger: TAACCTGATCTTGTGTGGCCACTCGGAGGTGTTGCC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACGTGTGCACAGGCTCTaGAAGAACTCCTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTRVHRL*KNSSAW
Trigger: CCAGGCAGAGGAGTTCTTCCAGAGCCTGTGCACACG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGTCTTCAGGGGCATTTTaGGTGAGTCTTCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRSSGAF*VSLQPA
Trigger: GGCTGGCTGAAGACTCACCCAAAATGCCCCTGAAGA...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAGTTCCTGAAGCCTCTTaGAGCTCACGGAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSVPEAS*SSRRQD
Trigger: GTCCTGCCTCCGTGAGCTCCAAGAGGCTTCAGGAAC...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCGAGCTCCAGTGGCGTaGACAGATTCTTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLRAPVA*TDSSQA
Trigger: AGCTTGTGAAGAATCTGTCCACGCCACTGGAGCTCG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGTCCATCAGGCTTACGTaGTCCTTCCTGTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRSIRLT*SFLFLT
Trigger: GGTGAGGAACAGGAAGGACCACGTAAGCCTGATGGA...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGAGAATAAAGACCACTaGGGACTGCCCTCGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRENKDH*GLPSVR
Trigger: TCTGACCGAGGGCAGTCCCCAGTGGTCTTTATTCTC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAATTACTGTCAGGGCCTaGGGATTGTGGGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSITVRA*GLWVAP
Trigger: GGGAGCCACCCACAATCCCCAGGCCCTGACAGTAAT...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACAGGCCCTTGTCCACTaGGGGCTTAGAGGTATTGAG +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSQALVH*GLRGIE
Trigger: CTCAATACCTCTAAGCCCTCAGTGGACAAGGGCCTG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGGGGTGTGATATTCTTTaGTCTGCCCAACACGCTCTG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLGCDIL*SAQHAL
Trigger: CAGAGCGTGTTGGGCAGATCAAAGAATATCACACCC...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCTCCCAGGAGCTGTATaGCATCTCCCTTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELLPGAV*HLPSLS
Trigger: TGACAGAGAAGGGAGATGTCATACAGCTCCTGGGAG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGACGCCTCACAGTCTTTaGGCTGACAGTTCAGAAACC +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRTPHSL*ADSSET
Trigger: GGTTTCTGAACTGTCAGCTCAAAGACTGTGAGGCGT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGATATGGATGGGGCTCTaGCTCCCACCTCTTTCGAAG +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELIWMGL*LPPLSK
Trigger: CTTCGAAAGAGGTGGGAGTCAGAGCCCCATCCATAT...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGGTTGCAGGCAGCAATaGTATGCAGGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTGCRQQ*YAGQSP
Trigger: AGGACTCTGGCCTGCATATCATTGCTGCCTGCAACC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAGTGTCTGTGATATACTaGGCCTGCACCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSVSVIY*ACTQSS
Trigger: GGAGCTCTGGGTGCAGGCTCAGTATATCACAGACAC...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACATCCCACGCTGGCTTaGGAGTTTCCTCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSHPTLA*EFPHQV
Trigger: TACCTGGTGAGGAAACTCTCAAGCCAGCGTGGGATG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGACCCTGCAGAGGGCTaGCGCTGCCCTCAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEDPAEG*RCPQCE
Trigger: TTCACACTGAGGGCAGCGGCAGCCCTCTGCAGGGTC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGACCCTGCAGAGGGCTaGCGCTGCCCTCAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYDPAEG*RCPQCE
Trigger: TTCACACTGAGGGCAGCGGCAGCCCTCTGCAGGGTC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGCCATCTTTGACGAATaGGGAGGACAGGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTAIFDE*GGQGSG
Trigger: ACCTGAGCCCTGTCCTCCGCATTCGTCAAAGATGGC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAAGGGCCATCTTACTCTaGATGAACTGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSRAILL*MNWRGW
Trigger: CCAGCCCCTCCAGTTCATGCAGAGTAAGATGGCCCT...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCACGACACTGACTGCTaGAGAAGAAGGAGATCTGCA +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLHDTDC*RRRRSA
Trigger: TGCAGATCTCCTTCTTCTGCAGCAGTCAGTGTCGTG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCATCTTCCAGGGCCTTGTaGAGCCAGGCAACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPSSRAL*SQATSS
Trigger: GGAGCTTGTTGCCTGGCTGCACAAGGCCCTGGAAGA...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGGTCTGCAGTCTCCTCTaGACTCACTCTGTATCCCAA +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLVCSLL*THSVSQ
Trigger: TTGGGATACAGAGTGAGTGCAGAGGAGACTGCAGAC...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCCACGGATTTTATCCTaGACCAGCCTGTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLPRILS*TSLSEE
Trigger: CTCTTCAGACAGGCTGGTGCAGGATAAAATCCGTGG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAATGCCTGAAGGTGCCTaGCTCCTGCAGGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKMPEGA*LLQGIL
Trigger: CAGGATGCCCTGCAGGAGGCAGGCACCTTCAGGCAT...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGTTCAGCGCAGGCCATTaGTGCAAATGCATCCAGTGT +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRFSAGH*CKCIQC
Trigger: ACACTGGATGCATTTGCAGCAATGGCCTGCGCTGAA...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAGGGGTTTGGGGCTTCTaGAGGCCATCAGAGCATTCC +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPGVWGF*RPSEHS
Trigger: GGAATGCTCTGATGGCCTGCAGAAGCCCCAAACCCC...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGTCTCTCTGGATGTGCTaGTGTAGGAAGCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELSLWMC*CRKPCG
Trigger: CCCACAAGGCTTCCTACAGCAGCACATCCAGAGAGA...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATCCTTCTGGAGGAAGTaGCAGAGGACAGGCACCGTT +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSSFWRK*QRTGTV
Trigger: AACGGTGCCTGTCCTCTGGCACTTCCTCCAGAAGGA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCCTCTGAGGAAGAAATaGTGCCCTGTCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELPLRKK*CPVSSS
Trigger: GGAGGAAGAGACAGGGCACCATTTCTTCCTCAGAGG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGGAAGCCATCCTCCATTaGCATGTTCTCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLEAILH*HVLCVQ
Trigger: CTGGACACAGAGAACATGCCAATGGAGGATGGCTTC...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCGAGGATGCGGTTCTTaGCTTGCTGGAAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELRGCGS*LAGKTQ
Trigger: CTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAATGAACTGGAGGGGCTaGCTCCTAGTGGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTMNWRG*LLVGAL
Trigger: CAAAGCACCCACTAGGAGCCAGCCCCTCCAGTTCAT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093902.12
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGCCAGTTTCTCGTGGTaGCCAGGGCCTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEASFSW*PGPPEG
Trigger: CCCTTCAGGAGGCCCTGGCCACCACGAGAAACTGGC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGCAGCCAGTTTCTCGTaGTGGCCAGGGCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKAASFS*WPGPPE
Trigger: TTCAGGAGGCCCTGGCCACCACGAGAAACTGGCTGC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATCCCCTGCGACCTTCTaGAACACAGACTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSSPATF*NTDSAV
Trigger: CACTGCTGAGTCTGTGTTCCAGAAGGTCGCAGGGGA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGCCTGCTGCTATTGTATaGTTTGGGAAAGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRPAAIV*FGKAPG
Trigger: GCCAGGTGCTTTCCCAAACCATACAATAGCAGCAGG...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGCGCCACATAGTTCCTaGTCAGCACGAGCAAGTAAC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELAPHSS*SARASN
Trigger: GTTACTTGCTCGTGCTGACCAGGAACTATGTGGCGC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGGTGTATTCCTGGTCCTaGGGAAAGCTGGAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLVYSWS*GKLEPK
Trigger: TTTTGGCTCCAGCTTTCCCCAGGACCAGGAATACAC...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGATGTTCCTGCAGATCTaGGTGTATTCCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLMFLQI*VYSWSW
Trigger: CCAGGACCAGGAATACACCCAGATCTGCAGGAACAT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAGCCGGTGAATCTGGTTaGGCCAGTAGCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPAGESG*ASSSRL
Trigger: CAACCTGGAGCTACTGGCCCAACCAGATTCACCGGC...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGTTGAGCAGGTTCATGTaGCTCTGCACCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLLSRFM*LCTRMK
Trigger: CTTCATCCTGGTGCAGAGCCACATGAACCTGCTCAA...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGCAGACGAGCTCCAGTaGCGTGGACAGATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTADELQ*RGQILH
Trigger: GTGAAGAATCTGTCCACGCCACTGGAGCTCGTCTGC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGCAATTGCTTTGCTTCTaGATGGAGGCTGCCATTGGG +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRQLLCF*MEAAIG
Trigger: CCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTG...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACTCTCCCACAGAGCATaGATGGCCTCTGGGACAAGT +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSLSHRA*MASGTS
Trigger: ACTTGTCCCAGAGGCCATCCATGCTCTGTGGGAGAG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGTGCTCCAGGTCTCTCTaGATGTGCTGCTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELCSRSL*MCCCRK
Trigger: CTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCA...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGTTGGAGAGGATCAGTaGATTCAGATCCCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRVGEDQ*IQIPFH
Trigger: GTGGAACGGGATCTGAATCCACTGATCCTCTCCAAC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATGGCCAACTTGCCTTTaGGTTCAGCTTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSWPTCL*VQLPGL
Trigger: GAGACCAGGAAGCTGAACTCAAAGGCAAGTTGGCCA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACATGTCTCCCAGCAATaGTCCCTTCCAGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTHVSQQ*SLPAML
Trigger: AAGCATGGCTGGAAGGGATCATTGCTGGGAGACATG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGTGGCATCTGCCACAATaGTCTTGGCAAGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELWHLPQ*SWQGIW
Trigger: CCAAATCCCTTGCCAAGATCATTGTGGCAGATGCCA...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACATGGGCTGCACTGGAATaGCACCAAGTGGACCTGTTT +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTWAALE*HQVDLF
Trigger: AAACAGGTCCACTTGGTGTCATTCCAGTGCAGCCCA...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGACAGCTGCTTTGCAGTaGACGAGCCTAATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELTAALQ*TSLMRN
Trigger: GTTCCTCATTAGGCTCGTTCACTGCAAAGCAGCTGT...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCTCAGAACCTGGGGGTaGATGGTCAAAATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELLRTWG*MVKILE
Trigger: CTCCAGAATTTTGACCATTCACCCCCAGGTTCTGAG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGGAATACCAAACCTGCTaGACTTCTTGCTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLEYQTC*TSCWPC
Trigger: ACAAGGCCAGCAAGAAGTTCAGCAGGTTTGGTATTC...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGAGCTATTTTCCACACTaGGATGCAGCTGGACATGAG +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRSYFPH*DAAGHE
Trigger: CTCATGTCCAGCTGCATCTCAGTGTGGAAAATAGCT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCTTCTGGCTGGGTGTTaGCACCTTCATTACTTTTCC +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLLLAGC*HLHYFS
Trigger: GGAAAAGTAATGAAGGTGGCAACACCCAGCCAGAAG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAGATCCCTTCCAGCCATaGTTCTCTGGGAAGCCGATC +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPDPFQP*FSGKPI
Trigger: GATCGGCTTCCCAGAGAAGCATGGCTGGAAGGGATC...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGAGGAAGTCCTCCATCTaGCTGCAGAGGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGERKSSI*LQRAPR
Trigger: CCTGGGAGCCCTCTGCAGGCAGATGGAGGACTTCCT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTTTAGGCTGGCCAGCCTaGAGGCCTTTGGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFLGWPA*RPLGSG
Trigger: GCCACTCCCCAAAGGCCTGCAGGCTGGCCAGCCTAA...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTTCAGAGGTCACGATaGCAACACACAGCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSFQRSR*QHTARL
Trigger: GAGACGGGCTGTGTGTTGGCATCGTGACCTCTGAAA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACAGGCGGAAGGCAGTGTaGACTCGGCACTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYRRKAV*TRHLTR
Trigger: CCGAGTCAAGTGCCGAGTGCACACTGCCTTCCGCCT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAACAGAGGAGGATGGTTaGCACATGGACGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTTEEDG*HMDGHF
Trigger: GAAATGGCCGTCCATGTGGCAACCATCCTCCTCTGT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACATCTCTCTGGATGTGCTaGTGTAGGAAGCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTSLWMC*CRKPCG
Trigger: CCCACAAGGCTTCCTACAGCAGCACATCCAGAGAGA...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGATGGTGATTCGGTCATaGAACAGCTTTCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLMVIRS*NSFLSP
Trigger: TGGGCTGAGAAAGCTGTTGCATGACCGAATCACCAT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAGTTTCCCCACCTTGCTaGACTTGGTACTGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSVSPPC*TWYWQL
Trigger: CAACTGCCAGTACCAAGTGCAGCAAGGTGGGGAAAC...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCAGGGGATGCCCAGGCTaGCTGGCCGCACCACCCTGC +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCRGCPG*LAAPPC
Trigger: GCAGGGTGGTGCGGCCAGCCAGCCTGGGCATCCCCT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGGTGCAGCCGCCTGCTaGGTTTTCACAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEGAAAC*VFTAAA
Trigger: TGCAGCAGCTGTGAAAACCCAGCAGGCGGCTGCACC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACGAGGATGCGGTTCTTaGCTTGCTGGAAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTRGCGS*LAGKTQ
Trigger: CTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACATTACTCTGCATGAACTaGAGGGGCTGGCTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTLLCMN*RGWLLV
Trigger: CACTAGGAGCCAGCCCCTCCAGTTCATGCAGAGTAA...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093902.12
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGCTTGTACGAGGTCCTaGACAGTGCATTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRACTRS*TVHLPL
Trigger: TAAAGGCAAATGCACTGTCCAGGACCTCGTACAAGC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCACGGAGGATCATCTCCTaGGAGTGCTTCCGATATGGG +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPRRIIS*ECFRYG
Trigger: CCCATATCGGAAGCACTCCCAGGAGATGATCCTCCG...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCAAAGGAATGAGGCTTaGAGGCAGAGCATGAACACG +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELQRNEA*RQSMNT
Trigger: CGTGTTCATGCTCTGCCTCCAAGCCTCATTCCTTTG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGCTGTCACTGGATTCATaGAGAAACTTGTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRLSLDS*RNLSSS
Trigger: GGAGCTCGACAAGTTTCTCCATGAATCCAGTGACAG...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATCTTGGCAAGGGATTTaGAGCTGCCGGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKSWQGI*SCRASP
Trigger: TGGGGAAGCCCGGCAGCTCCAAATCCCTTGCCAAGA...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACACAATCCAGCAGGATaGACCTGGCCTCTTCAGACA +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSHNPAG*TWPLQT
Trigger: TGTCTGAAGAGGCCAGGTCCATCCTGCTGGATTGTG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAAGGGCTCTGACCTCCTaGATGACAGATCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTRALTS*MTDLVM
Trigger: CATGACCAGATCTGTCATCCAGGAGGTCAGAGCCCT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCCACAAAGAGGGCAATaGAGAAAATGCGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLPQRGQ*RKCGST
Trigger: TGTGGAACCGCATTTTCTCCATTGCCCTCTTTGTGG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGTTGGAGAGGATCAGTaGATTCAGATCCCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELVGEDQ*IQIPFH
Trigger: GTGGAACGGGATCTGAATCCACTGATCCTCTCCAAC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CAA 72 bp CTTCTCCACTCTCTGTCCGGTGATCTCAGTGAGTGGTaGGCAGTGGCTCATGGTGGGTTTACATGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LLHSLSGDLSEW*AVAHGGFTWWV
Trigger: AACCCACCATGTAAACCCACCATGAGCCACTGCCAACCACTCACTGAGATCACCGGACAGAGAGTGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGTGCGTTCTGCAGCCTaGCCCTGCAGAGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCVRSAA*PCRGLP
Trigger: CGGCAGCCCTCTGCAGGGTCAGGCTGCAGAACGCAC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACAGGCCCTTGTCCACTaGGGGCTTAGAGGTATTGAG +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKQALVH*GLRGIE
Trigger: CTCAATACCTCTAAGCCCTCAGTGGACAAGGGCCTG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGATTATGTCATCATACTaGTGCCAGTCTCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRIMSSY*CQSPLP
Trigger: GGGCAATGGAGACTGGCATCAGTATGATGACATAAT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACCCATCTTACTCTGCATaGACTGGAGGGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYPSYSA*TGGAGS
Trigger: GGAGCCAGCCCCTCCAGTTCATGCAGAGTAAGATGG...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093902.12
CDS-3UTR TCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATCACCACAAAGTTCTTaGAGCCCCGAAGTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSSPQSS*SPEVCL
Trigger: GAGACACACTTCGGGGCTTCAAGAACTTTGTGGTGA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGCTTTGGTCTGAAGTGTaGAGAGTCGGAGTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRLWSEV*RVGVAK
Trigger: TTTTGCTACTCCGACTCTTCACACTTCAGACCAAAG...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACATTCTCTCAGCCTCCTTaGCCTTGGAGTAGATCATGG +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTFSQPP*PWSRSW
Trigger: CCATGATCTACTCCAAGGTCAAGGAGGCTGAGAGAA...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATGGCATCTGCCACAATaGTCTTGGCAAGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSWHLPQ*SWQGIW
Trigger: CCAAATCCCTTGCCAAGATCATTGTGGCAGATGCCA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTCGCAGCCTCCCTGGTaGCCCACTCCTTTAAACTGC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYSQPPW*PTPLNC
Trigger: GCAGTTTAAAGGAGTGGGTCACCAGGGAGGCTGCGA...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGTCAGGAGGTCTCCCTTaGGCATTTCAGCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGESGGLP*AFQRRP
Trigger: TGGCCTGCGCTGAAATGCTCAAGGGAGACCTCCTGA...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACGTAGACAATACACATaGTCACAGGGCAGACAGACG +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSRRQYT*SQGRQT
Trigger: CGTCTGTCTGCCCTGTGATCATGTGTATTGTCTACG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCATCATTTGCCCAGGGATaGGCCAGGTCTGAATGCAAC +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPSFAQG*ARSECN
Trigger: GTTGCATTCAGACCTGGCTCATCCCTGGGCAAATGA...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAACTGCCAGAGAGCAATaGTGTGTCTCAGCTGACATC +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTTAREQ*CVSADI
Trigger: GATGTCAGCTGAGACACATCATTGCTCTCTGGCAGT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGAGCTATTTTCCACACTaGGATGCAGCTGGACATGAG +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELSYFPH*DAAGHE
Trigger: CTCATGTCCAGCTGCATCTCAGTGTGGAAAATAGCT...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR GCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCACTGCTGCAAAGTTTCTaGCCTCTCCTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPLLQSF*PLLASS
Trigger: AGAGGAAGCCAGGAGAGGGCAGAAACTTTGCAGCAG...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACTGGGTTTTCACAGCTaGTGCAAAGTTTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTLGFHS*CKVSAL
Trigger: GAGGGCAGAAACTTTGCAGCAGCTGTGAAAACCCAG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACACGACACTGACTGCTaGAGAAGAAGGAGATCTGCA +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSHDTDC*RRRRSA
Trigger: TGCAGATCTCCTTCTTCTGCAGCAGTCAGTGTCGTG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACAGGCAGCAATGATATaGAGGCCAGAGTCCTCATGT +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTQAAMI*RPESSC
Trigger: ACATGAGGACTCTGGCCTGCATATCATTGCTGCCTG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTAGGCGGAAGGCAGTGTaGACTCGGCACTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFRRKAV*TRHLTR
Trigger: CCGAGTCAAGTGCCGAGTGCACACTGCCTTCCGCCT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACACTGCTGTAGCTCCTaGACGATGCTCTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKHCCSS*TMLFCH
Trigger: GTGGCAGAAGAGCATCGTGCAGGAGCTACAGCAGTG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCACAAGCTGTGCTTCTCTaGTGCTTGACTGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPQAVLL*CLTEAA
Trigger: AGCAGCCTCAGTCAAGCAGCAGAGAAGCACAGCTTG...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGATGGTGATTCGGTCATaGAACAGCTTTCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELMVIRS*NSFLSP
Trigger: TGGGCTGAGAAAGCTGTTGCATGACCGAATCACCAT...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGATGCCCAGGCTGGCTaGCCGCACCACCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHDAQAG*PHHPAG
Trigger: CCCAGCAGGGTGGTGCGGCCAGCCAGCCTGGGCATC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAGGCCGCAGCATCAATTaGCGGCACTTTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPGRSIN*RHFLLL
Trigger: CAAGAGAAGAAAGTGCCGCCAATTGATGCTGCGGCC...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGGTGCAGCAGCCTGCTaGGGTGCAGCCGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHGAAAC*GAAACW
Trigger: CCAGCAGGCGGCTGCACCCCAGCAGGCTGCTGCACC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAAGGTCATGCAGGTCTTaGGTGCAGTACATCTCGCAT +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTRSCRS*VQYISH
Trigger: ATGCGAGATGTACTGCACCCAAGACCTGCATGACCT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATGTCCAGGCTCTGTCTaGGAATGTCCATTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSCPGSV*ECPFCP
Trigger: AGGGCAAAATGGACATTCCCAGACAGAGCCTGGACA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCACTCAGGTAGTCTATaGAGTTCTCCAAGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLHSGSL*SSPSRK
Trigger: CTTCCTACTTGGAGAACTCCATAGACTACCTGAGTG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATCTGGGGAAATCTTCTaGCCATCTTTGGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSSGEIF*PSLGAS
Trigger: TGAGGCACCCAAAGATGGCCAGAAGATTTCCCCAGA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGCTTGTACGAGGTCCTaGACAGTGCATTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELACTRS*TVHLPL
Trigger: TAAAGGCAAATGCACTGTCCAGGACCTCGTACAAGC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGTCAGAAAGCAGCTGCTaGGGCAACTTTTTCATAACC +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLSESSC*GNFFIT
Trigger: GGTTATGAAAAAGTTGCCCCAGCAGCTGCTTTCTGA...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGCTTGCCCATTAGGCTaGGCTCAGAAAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKACPLG*AQKAAA
Trigger: AGCAGCTGCTTTCTGAGCCCAGCCTAATGGGCAAGC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAACTGCAGAACTCCACTaGGTCCATGGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKTAELH*VHGRVC
Trigger: ACAGACCCTGCCATGGACCCAGTGGAGTTCTGCAGT...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCTGTCACTGGATTCATaGAGAAACTTGTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELLSLDS*RNLSSS
Trigger: GGAGCTCGACAAGTTTCTCCATGAATCCAGTGACAG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCATGCCTCGGTTCATCTTaGCAGGATCTAGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPCLGSS*QDLEPS
Trigger: ACTGGGCTCTAGATCCTGCCAAGATGAACCGAGGCA...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACATTGAGCAGGTTCATGTaGCTCTGCACCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTLSRFM*LCTRMK
Trigger: CTTCATCCTGGTGCAGAGCCACATGAACCTGCTCAA...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGTTCCTGAAGCCTCTTaGAGCTCACGGAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYVPEAS*SSRRQD
Trigger: GTCCTGCCTCCGTGAGCTCCAAGAGGCTTCAGGAAC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGAATGGTCAAAATTCTaGAGAAGTTCTGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVREWSKF*RSSVAG
Trigger: CCCGGCTACAGAACTTCTCCAGAATTTTGACCATTC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGGAACCTGGGGGTGAATaGTCAAAATTCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLEPGGE*SKFWRS
Trigger: ACTTCTCCAGAATTTTGACCATTCACCCCCAGGTTC...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGCTGTAACCAAGCCTTaGGGCTTGGCTTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKAVTKP*GLASGG
Trigger: ACCTCCTGAAGCCAAGCCCCAAGGCTTGGTTACAGC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGGGCGTGCTTCTCAATaGCTTTCCTGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEGRASQ*LSCGPG
Trigger: CCCAGGACCACAGGAAAGCCATTGAGAAGCACGCCC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACAATTGCTTTGCTTCTaGATGGAGGCTGCCATTGGG +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSQLLCF*MEAAIG
Trigger: CCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACATTACTGTCAGGGCCTaGGGATTGTGGGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYITVRA*GLWVAP
Trigger: GGGAGCCACCCACAATCCCCAGGCCCTGACAGTAAT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGTTGGAGAGGATCAGTaGATTCAGATCCCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTVGEDQ*IQIPFH
Trigger: GTGGAACGGGATCTGAATCCACTGATCCTCTCCAAC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACCACCTTGCTGCACTTaGTACTGGCAGTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKPPCCT*YWQLER
Trigger: CCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CAA 72 bp TGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTaGGCAAGTTCATTAAGCCCTGTACCCCCAAAAACC +
Preference number: 4 (lower is better)
Translates to: CPLMDHRSSKAK*ASSLSPVPPKT
Trigger: GGTTTTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACATGTCTCCCAGCAATaGTCCCTTCCAGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKHVSQQ*SLPAML
Trigger: AAGCATGGCTGGAAGGGATCATTGCTGGGAGACATG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATTTCTGCAAGTCTTaGCAGGAGAGCCCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPNFCKS*QESPSS
Trigger: GCTTGAGGGGCTCTCCTGTCAAGACTTGCAGAAATT...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAATCTCTTCTCTTGCTTaGGGAACAGCAGATCATCCC +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTISSLA*GTADHP
Trigger: GGGATGATCTGCTGTTCCTCAAGCAAGAGAAGAGAT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCAACTTCAGCAAAGGTaGTCTTTCCTGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLQLQQR*SFLTSD
Trigger: ATCTGAAGTCAGGAAAGATCACCTTTGCTGAAGTTG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGCCTGGTGCAGGGTGTaGTATTCTTTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKAWCRV*YSLICP
Trigger: TGGGCAGATCAAAGAATATCACACCCTGCACCAGGC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGTCACAGTCTTTGAGCTaGCAGTTCAGAAACCAAGCA +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELSQSLS*QFRNQA
Trigger: TGCTTGGTTTCTGAACTGTCAGCTCAAAGACTGTGA...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCATCACCACAAAGTTCTTaGAGCCCCGAAGTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPSPQSS*SPEVCL
Trigger: GAGACACACTTCGGGGCTTCAAGAACTTTGTGGTGA...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGGTTGCAGGCAGCAATaGTATGCAGGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYGCRQQ*YAGQSP
Trigger: AGGACTCTGGCCTGCATATCATTGCTGCCTGCAACC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATCACCTGCTGTGCAATaGCTTTCCTGGGAAACACCC +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKSPAVQ*LSWETP
Trigger: GGGTGTTTCCCAGGAAAGTCATTGCACAGCAGGTGA...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGCAGGTACTCCACTGTaGTTTTCCTCCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEAGTPL*FSSCSS
Trigger: GGAGCTGCAGGAGGAAAATCACAGTGGAGTACCTGC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATCCTTGCACAGTAGCTaGAGAAGGCAATTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSSLHSS*RRQFLS
Trigger: GGACAGAAATTGCCTTCTGCAGCTACTGTGCAAGGA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCTCTGTGTCCAGGGGATaGCCAGGCTGGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCSVSRG*PGWLAA
Trigger: TGCGGCCAGCCAGCCTGGGCATCCCCTGGACACAGA...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGTCAGTCCAGCCTTTCTaGCCAAGTCCTTCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGESVQPF*PSPSPP
Trigger: AGGCGGAGAAGGACTTGGGCAGAAAGGCTGGACTGA...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAAGAGATCCCAGGTCATaGAGGTCTTGGGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKRDPRS*RSWVQY
Trigger: GTACTGCACCCAAGACCTGCATGACCTGGGATCTCT...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAATTCCACAGTATCCTTaGTACTGCCACCACGGTGAA +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTIPQYP*YCHHGE
Trigger: TTCACCGTGGTGGCAGTAGCAAGGATACTGTGGAAT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAATGACCACAGCAGCCTaGTTCTTCCCTTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSMTTAA*FFPFNS
Trigger: ACTGTTGAAAGGGAAGAAGCAGGCTGCTGTGGTCAT...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGACGTATCTCTTCTCTTaGTTGAGGAACAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLTYLFS*LRNSRS
Trigger: TGATCTGCTGTTCCTCAAGCAAGAGAAGAGATACGT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAAGCTCTTCGGACCTaGAAGATGACCTTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPKALRT*KMTLAE
Trigger: CTCTGCCAAGGTCATCTTGCAGGTCCGAAGAGCTTT...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGGGTGGAGTGTGGGCTaGACTGGAATGACACCAAGT +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYGWSVG*TGMTPS
Trigger: ACTTGGTGTCATTCCAGTGCAGCCCACACTCCACCC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCACCACGGATTTTATCCTaGACCAGCCTGTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPPRILS*TSLSEE
Trigger: CTCTTCAGACAGGCTGGTGCAGGATAAAATCCGTGG...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACTCTGCAGGAGTTTTTaGTGCTGTGCCACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKLCRSF*CCATGN
Trigger: GTTCCCTGTGGCACAGCAGCAAAAACTCCTGCAGAG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACAATGTCTAGGGTCTTaGACTCAAGCACAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTQCLGS*TQAQLW
Trigger: CCAAAGCTGTGCTTGAGTGCAAGACCCTAGACATTG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACATTCACTGCCTCCAATTaGTTTGCTTCTGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTFTASN*FASGWR
Trigger: CCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAA...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCCTTGCCTGGGTCTGTaGACGAGAGTAGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFPCLGL*TRVGPP
Trigger: AGGAGGTCCTACTCTCGTCCACAGACCCAGGCAAGG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGGAATCTCAAAGAACTaGTGGTTAGCTGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRGISKN*WLAVML
Trigger: CAACATCACAGCTAACCACCAGTTCTTTGAGATTCC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGTCTTGCCAGAAGTCCTaGAAGATATGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELSCQKS*KIWLSF
Trigger: GAAAGACAGCCATATCTTCCAGGACTTCTGGCAAGA...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGTATTCCAAGACCTCTaGAAGCGAAACCTTCAACTC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELVFQDL*KRNLQL
Trigger: GAGTTGAAGGTTTCGCTTCCAGAGGTCTTGGAATAC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACCTTCAGTTCCTCTGTaGAGTAGGTGCGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKPSVPL*SRCAMP
Trigger: AGGCATTGCGCACCTACTCCACAGAGGAACTGAAGG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCCCTTCTCTGTCAGCTaGCTCAGCAGCTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFPFSVS*LSSSKP
Trigger: TGGCTTGGAGCTGCTGAGCCAGCTGACAGAGAAGGG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGCTTGCCCATTAGGCTaGGCTCAGAAAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEACPLG*AQKAAA
Trigger: AGCAGCTGCTTTCTGAGCCCAGCCTAATGGGCAAGC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGTGCTGATGATACCTTaGGGGGTGGAGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFVLMIP*GVECGL
Trigger: CAGCCCACACTCCACCCCCCAAGGTATCATCAGCAC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGCCAATTCCTTTGACTaGCTTGTCTCTATCTCCATC +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELANSFD*LVSISI
Trigger: GATGGAGATAGAGACAAGCCAGTCAAAGGAATTGGC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGAACCTGGGGGTGAATaGTCAAAATTCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELEPGGE*SKFWRS
Trigger: ACTTCTCCAGAATTTTGACCATTCACCCCCAGGTTC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATCCATCAGGCTTACGTaGTCCTTCCTGTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKSIRLT*SFLFLT
Trigger: GGTGAGGAACAGGAAGGACCACGTAAGCCTGATGGA...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACCTCTCCCACAGAGCATaGATGGCCTCTGGGACAAGT +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYLSHRA*MASGTS
Trigger: ACTTGTCCCAGAGGCCATCCATGCTCTGTGGGAGAG...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACATGAGGTGGACCACATaGATGGTCTCGTCGGCACTC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYMRWTT*MVSSAL
Trigger: GAGTGCCGACGAGACCATCCATGTGGTCCACCTCAT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCATGCTGCACTTGGTACTaGCAGTTGGAGAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPCCTWY*QLERIS
Trigger: ACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCA...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCCACCTTGCTGCACTTaGTACTGGCAGTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEPPCCT*YWQLER
Trigger: CCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCTCCCAGGAGCTGTATaGCATCTCCCTTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGELPGAV*HLPSLS
Trigger: TGACAGAGAAGGGAGATGTCATACAGCTCCTGGGAG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGACCTGGGCTTTGGTCTaGAGTGTGAAGAGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGETWALV*SVKSRS
Trigger: ACTCCGACTCTTCACACTTCAGACCAAAGCCCAGGT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGATATGGATGGGGCTCTaGCTCCCACCTCTTTCGAAG +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEIWMGL*LPPLSK
Trigger: CTTCGAAAGAGGTGGGAGTCAGAGCCCCATCCATAT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTCTCCCTCTTCCTCATaGACATCTGCGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYSPSSS*TSARQR
Trigger: TCTCTGCCTCGCAGATGTTCATGAGGAAGAGGGAGA...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCCTCAGCACTCTCTATaGGCTCTTTCTCGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEPQHSL*ALSRWD
Trigger: GTCCCAACGAGAAAGAGCTCATAGAGAGTGCTGAGG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCACAAAGTCTGCCTGGATaGCTAGGACTTTACGTTTGC +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPQSLPG*LGLYVC
Trigger: GCAAACGTAAAGTCCTAGTCATCCAGGCAGACTTTG...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTTCTCATTCTGGTCTCTaGGCATCCCCACAGCACCCT +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFSHSGL*ASPQHP
Trigger: AGGGTGCTGTGGGGATGCTCAGAGACCAGAATGAGA...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTTCATCAGGTGTTCCTaGAGCCTCTTGGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYFIRCS*SLLELT
Trigger: CGTGAGCTCCAAGAGGCTTCAGGAACACCTGATGAA...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACTCAGAACCTGGGGGTaGATGGTCAAAATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKLRTWG*MVKILE
Trigger: CTCCAGAATTTTGACCATTCACCCCCAGGTTCTGAG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACATCTCCATGGCAGATaGAACATGGCTGAATACCAA +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTHLHGR*NMAEYQ
Trigger: TTGGTATTCAGCCATGTTTCATCTGCCATGGAGATG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCATGGAAGCTGTACTTaGGAAGCAGTTTTAACAGCA +
Preference number: 4 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELHGSCT*EAVLTA
Trigger: TGCTGTTAAAACTGCTTCTCAAGTACAGCTTCCATG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCCAGAGGCCTAGGCCCTaGCGCCTTGGAAGGATGACC +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCQRPRP*RLGRMT
Trigger: GGTCATCCTTCCAAGGCGTCAGGGCCTAGGCCTCTG...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAAGATGCAGCTGGACATaGGTATTTCTTCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTRCSWT*VFLQGT
Trigger: AGTTCCCTGAAGAAATACTCATGTCCAGCTGCATCT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR GCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTCTCAGCACTGCCCCCTaGTCAGTCTTTCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGLSTAP*SVFPSG
Trigger: CCCGGAAGGAAAGACTGAGCAGGGGGCAGTGCTGAG...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACCTGCTGCAAAGTTTCTaGCCTCTCCTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYLLQSF*PLLASS
Trigger: AGAGGAAGCCAGGAGAGGGCAGAAACTTTGCAGCAG...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGTGGAGACTTCTGCATaGAGGTGTGCAGGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFVETSA*RCAGGV
Trigger: TACCCCTCCTGCACACCTGCATGCAGAAGTCTCCAC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGACCTGGCGATGGCAGTaGGGTAGGATGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGETWRWQ*GRMLSL
Trigger: AAGAGAAAGCATCCTACCGCACTGCCATCGCCAGGT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACACCTGGCGATGGCAGTaGGGTAGGATGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYTWRWQ*GRMLSL
Trigger: AAGAGAAAGCATCCTACCGCACTGCCATCGCCAGGT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCGGAGGTCATCAATATaGACAGACCGCCATAGCCCT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGERRSSI*TDRHSP
Trigger: AGGGCTATGGCGGTCTGTGCATATTGATGACCTCCG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGATCTCCATCTCCTCCTaGTCAGGTTTGTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEISISS*SGLSSG
Trigger: GCCAGAGGACAAACCTGAGCAGGAGGAGATGGAGAT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGACCTGGTTCTCTTCTTaGTTGTTTAGAAGAACATGG +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRTWFSS*LFRRTW
Trigger: CCATGTTCTTCTAAACAAGCAAGAAGAGAACCAGGT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACCTCTGCAGGAGTTTTTaGTGCTGTGCCACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYLCRSF*CCATGN
Trigger: GTTCCCTGTGGCACAGCAGCAAAAACTCCTGCAGAG...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATTCAGCGCAGGCCATTaGTGCAAATGCATCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKFSAGH*CKCIQC
Trigger: ACACTGGATGCATTTGCAGCAATGGCCTGCGCTGAA...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGAGAAGAGTTTCAAAATaGTTCTCCCAGTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRRRVSK*FSQLFL
Trigger: CAGGAACAACTGGGAGAAGCATTTTGAAACTCTTCT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGTGAGATCCAGGACTTaGAGGCATGTCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYVRSRT*RHVQTP
Trigger: TGGAGTCTGGACATGCCTCCAAGTCCTGGATCTCAC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGTCCTTCTTCATGTTCTaGTTTGAGATCTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLSFFMF*FEIFLS
Trigger: GCTAAGGAAGATCTCAAACCAGAACATGAAGAAGGA...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACATTGCAGACAGTTTCATaGAGGGTCAAACACTCAGTC +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTLQTVS*RVKHSV
Trigger: GACTGAGTGTTTGACCCTCCATGAAACTGTCTGCAA...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCTCAATTGTGGTCGCTaGGGTGCAGAGCAACACCTC +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFLNCGR*GAEQHL
Trigger: GAGGTGTTGCTCTGCACCCCAGCGACCACAATTGAG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTACTCCACTGGGTCCATaGCAGGGTCTGTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGTPLGP*QGLCGS
Trigger: GGAGCCACACAGACCCTGCCATGGACCCAGTGGAGT...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTCTTCAGGGGCATTTTaGGTGAGTCTTCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYSSGAF*VSLQPA
Trigger: GGCTGGCTGAAGACTCACCCAAAATGCCCCTGAAGA...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGCGCCACATAGTTCCTaGTCAGCACGAGCAAGTAAC +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEAPHSS*SARASN
Trigger: GTTACTTGCTCGTGCTGACCAGGAACTATGTGGCGC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGCTTTCCTGTGGTCCTaGGAAACAGTTGGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKAFLWS*ETVGEN
Trigger: GTTCTCACCAACTGTTTCCCAGGACCACAGGAAAGC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAAGTTCTGAGCCTTCCTaGAGCTCTGAGAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKSSEPS*SSERKS
Trigger: TGACTTCCTCTCAGAGCTCCAGGAAGGCTCAGAACT...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCTGCTCAGGATGAGGTaGACCACATGGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFLLRMR*TTWMVS
Trigger: CGAGACCATCCATGTGGTCCACCTCATCCTGAGCAG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAACTCTCGAGACATTCTaGAACTGTTTGACCAGATCC +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTTLETF*NCLTRS
Trigger: GGATCTGGTCAAACAGTTCCAGAATGTCTCGAGAGT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGAGCTGTTGTCTTCATTaGAAAACTTTTGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRSCCLH*KTFAPC
Trigger: ACACGGTGCAAAAGTTTTCCAATGAAGACAACAGCT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAATTTCTTCAGGGAACTaGGACTCCACTTCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSISSGN*DSTSER
Trigger: CCTTTCAGAAGTGGAGTCCCAGTTCCCTGAAGAAAT...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGTGGCCAGGGCCTCCTaGAGGGTGCTTGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHVARAS*RVLVTK
Trigger: CTTGGTGACAAGCACCCTTCAGGAGGCCCTGGCCAC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGGGGAGGCTCCTGCTTaGGCCTCCCTTCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHGEAPA*ASLPCL
Trigger: GAGACATGGAAGGGAGGCTCAAGCAGGAGCCTCCCC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGGGGGAGGCTCCTGCTTaGGCCTCCCTTCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILGEAPA*ASLPCL
Trigger: GAGACATGGAAGGGAGGCTCAAGCAGGAGCCTCCCC...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCCTGGGAGCCCGAAGTaGGGCAGCGCCGCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEPGSPK*GSAAGV
Trigger: TACTCCTGCGGCGCTGCCTCACTTCGGGCTCCCAGG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAAAAGTTCCGAAGCTCTaGCCAGGAAGGGTTTATGAG +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKKVPKL*PGRVYE
Trigger: CTCATAAACCCTTCCTGGTCAGAGCTTCGGAACTTT...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTTCTCTCAGCCTCCTTaGCCTTGGAGTAGATCATGG +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYFSQPP*PWSRSW
Trigger: CCATGATCTACTCCAAGGTCAAGGAGGCTGAGAGAA...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAACTTGTGTCTGGCAATaGACTGGTCTGCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTTCVWQ*TGLLLH
Trigger: ATGTAAAAGCAGACCAGTTCATTGCCAGACACAAGT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACACAGCTGCTTTGCAGTaGACGAGCCTAATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYTAALQ*TSLMRN
Trigger: GTTCCTCATTAGGCTCGTTCACTGCAAAGCAGCTGT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTTCCAAAGGGTATGCCTaGAGGTGCCTGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGSKGYA*RCLPPA
Trigger: TGCAGGAGGCAGGCACCTTCAGGCATACCCTTTGGA...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACCATTGTAGGCATCCTTaGGCAGGTTCATGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYHCRHP*AGSCGS
Trigger: AGAGCCACATGAACCTGCTCAAGGATGCCTACAATG...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCACATCTCCATGGCAGATaGAACATGGCTGAATACCAA +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPHLHGR*NMAEYQ
Trigger: TTGGTATTCAGCCATGTTTCATCTGCCATGGAGATG...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACCGTAGACAATACACATaGTCACAGGGCAGACAGACG +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYRRQYT*SQGRQT
Trigger: CGTCTGTCTGCCCTGTGATCATGTGTATTGTCTACG...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTACAGCACAGAGCGGATaGCAGGAGTCTGGTCAACAA +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFTAQSG*QESGQQ
Trigger: TTGTTGACCAGACTCCTGTCATCCGCTCTGTGCTGT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACACTGCCAGAGAGCAATaGTGTGTCTCAGCTGACATC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYTAREQ*CVSADI
Trigger: GATGTCAGCTGAGACACATCATTGCTCTCTGGCAGT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGTTTCTCCAGTTCCTTaGCTGGGTCTGTGGACGAGA +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFVSPVP*LGLWTR
Trigger: TCTCGTCCACAGACCCAGGCAAGGAACTGGAGAAAC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCACAGTTCGAAGAGCTaGCTCACATCTGGCCACTTG +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFHSSKS*LTSGHL
Trigger: CAAGTGGCCAGATGTGAGGCAGCTCTTCGAACTGTG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGTTTCCAAAATCCACTTaGACAAGGTGTTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLFPKST*TRCFTL
Trigger: AAGAGTGAAACACCTTGTGCAAGTGGATTTTGGAAA...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGACTCTGCTGTCTCTTaGCAGAAGTCCTGGAAGATA +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKDSAVS*QKSWKI
Trigger: TATCTTCCAGGACTTCTGGCAAGAGACAGCAGAGTC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGTTGGAAAGCTTCACTaGAGAACTCCACTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEVGKLH*RTPLGP
Trigger: TGGACCCAGTGGAGTTCTGCAGTGAAGCTTTCCAAC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCCCTTGCATGGCATCTaGCACAATGATCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEPLHGI*HNDLGK
Trigger: CTTGCCAAGATCATTGTGGCAGATGCCATGCAAGGG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCCCTCAAAGAACGTCTaGTGTAGGATTTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFPSKNV*CRICSA
Trigger: GGCGCTGCAAATCCTACAGCAGACGTTCTTTGAGGG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACTGATGGTGACATTCTaGAGTTTGGTGACATCTGAA +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSLMVTF*SLVTSE
Trigger: TTCAGATGTCACCAAACTGCAGAATGTCACCATCAG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGGGGTTTGGGGCTTCTaGAGGCCATCAGAGCATTCC +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGGVWGF*RPSEHS
Trigger: GGAATGCTCTGATGGCCTGCAGAAGCCCCAAACCCC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTTGCCTCCAATTGCTTTaGTTCTGGATGGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFCLQLL*FWMEAA
Trigger: GGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCA...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGTTTCCCCACCTTGCTaGACTTGGTACTGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFVSPPC*TWYWQL
Trigger: CAACTGCCAGTACCAAGTGCAGCAAGGTGGGGAAAC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGTGAGATCCAGGACTTaGAGGCATGTCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFVRSRT*RHVQTP
Trigger: TGGAGTCTGGACATGCCTCCAAGTCCTGGATCTCAC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGAAGCCATCCTCCATTaGCATGTTCTCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYEAILH*HVLCVQ
Trigger: CTGGACACAGAGAACATGCCAATGGAGGATGGCTTC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGGAGTTCTTCTTGGGTaGAGACTTCTGCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEGVLLG*RLLHAG
Trigger: ACCTGCATGCAGAAGTCTCCACCCAAGAAGAACTCC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGACACCTCATCAAAGGTaGGCAGGGGCTGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILTPHQR*AGAAWG
Trigger: CCCCCAGGCAGCCCCTGCCCACCTTTGATGAGGTGT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACCCTGCTGCTATTGTATaGTTTGGGAAAGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYPAAIV*FGKAPG
Trigger: GCCAGGTGCTTTCCCAAACCATACAATAGCAGCAGG...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGTGGAATGACACCAAGTaGACCTGTTTCAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEWNDTK*TCFRQR
Trigger: TCGCTGCCTGAAACAGGTCCACTTGGTGTCATTCCA...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCCTTCCTCCTTGTACCTaGCCTCCGGGAGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCLPPCT*PPGDWL
Trigger: CAGCCAGTCTCCCGGAGGCCAGGTACAAGGAGGAAG...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACATGTTCCTGCAGATCTaGGTGTATTCCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYMFLQI*VYSWSW
Trigger: CCAGGACCAGGAATACACCCAGATCTGCAGGAACAT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCATCGTCAAAGTCTGCCTaGATGACTAGGACTTTACGT +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPSSKSA*MTRTLR
Trigger: ACGTAAAGTCCTAGTCATCCAGGCAGACTTTGACGA...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAACAGTCACAGCTTCTTaGGTCAGAGGCCTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPTVTAS*VRGLFH
Trigger: ATGAAAAAGGCCTCTGACCCAAGAAGCTGTGACTGT...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGATGGATGGCCCTGCTTaGAGAAGCTCTGCACGAATT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEMDGPA*RSSARI
Trigger: AATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCAT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAAAGCCTTGTGGGTCCTaGACCCAAGGCTTAATGATT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKKPCGS*TQGLMI
Trigger: AATCATTAAGCCTTGGGTCCAGGACCCACAAGGCTT...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTAGCACAATCATCTCATaGAGCTCCAGGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFSTIIS*SSRRKA
Trigger: CGCCTTCCTCCTGGAGCTCCATGAGATGATTGTGCT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTAGAGGAAGGTGCCTCTaGGGAAGAAATGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGRGRCL*GRNGAL
Trigger: CAGGGCACCATTTCTTCCTCAGAGGCACCTTCCTCT...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTCAGCTGCTTCCACCATaGAAAGGATGCTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGQLLPP*KGCSGP
Trigger: TGGGCCTGAGCATCCTTTTCATGGTGGAAGCAGCTG...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACAGAGTTCCTGTAGATaGTTCATGAAGTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSQSSCR*FMKSEK
Trigger: TTTCTCTGACTTCATGAATCATCTACAGGAACTCTG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCGCAGTGCAGTTTTATaGAGACATGTACAAGCCGCT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGERSAVL*RHVQAA
Trigger: AGCGGCTTGTACATGTCTTCATAAAACTGCACTGCG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGTAGTAGTACTCCTGTaGCAGCTGCTTTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYVVVLL*QLLCSE
Trigger: TTCACTGCAAAGCAGCTGTCACAGGAGTACTACTAC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGTATGTCCTAAGGAAGTaGCCTTCCTCTCTGAGAACC +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEYVLRK*PSSLRT
Trigger: GGTTCTCAGAGAGGAAGGTCACTTCCTTAGGACATA...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTATGTCCTAAGGAAGTaGCCTTCCTCTCTGAGAACC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYYVLRK*PSSLRT
Trigger: GGTTCTCAGAGAGGAAGGTCACTTCCTTAGGACATA...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCATTCTGGAACTGTTTaGCCAGATCCCTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEHSGTV*PDPFAE
Trigger: CTCTGCAAAGGGATCTGGTCAAACAGTTCCAGAATG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACAGCTATTTTCCACACTaGGATGCAGCTGGACATGAG +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYSYFPH*DAAGHE
Trigger: CTCATGTCCAGCTGCATCTCAGTGTGGAAAATAGCT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGGTTTTCACAGCTGCTaGAAAGTTTCTGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFGFHSC*KVSALS
Trigger: GGAGAGGGCAGAAACTTTGCAGCAGCTGTGAAAACC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCTCAGAGAAGGCAGCCTaGCCTTGCATGGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCSEKAA*PCMASA
Trigger: GGCAGATGCCATGCAAGGGCAGGCTGCCTTCTCTGA...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTCCCTGCACACAGCTCTaGACCAGTCTGGTGGTATCT +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGPCTQL*TSLVVS
Trigger: AGATACCACCAGACTGGTGCAGAGCTGTGTGCAGGG...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAACCTGGTTCTCTTCTTaGTTGTTTAGAAGAACATGG +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSTWFSS*LFRRTW
Trigger: CCATGTTCTTCTAAACAAGCAAGAAGAGAACCAGGT...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTACTCTGGCCACCTCCTaGAGGTACTCCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGTLATS*RYSTEA
Trigger: TGCTTCAGTGGAGTACCTGCAGGAGGTGGCCAGAGT...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGCCGCACCACCCTGCTaGGCTTGGTTCTGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIAAPPC*AWFWGK
Trigger: CTTGCCCCAGAACCAAGCCCAGCAGGGTGGTGCGGC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACCGGGAGACAATAGCGTaGAAGTACACAGTGACTGTA +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYRETIA*KYTVTV
Trigger: TACAGTCACTGTGTACTTCCACGCTATTGTCTCCCG...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGGCAGCCAGTTTCTCGTaGTGGCCAGGGCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILAASFS*WPGPPE
Trigger: TTCAGGAGGCCCTGGCCACCACGAGAAACTGGCTGC...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAAAGTCCTGGAAGATATaGCTGTCTTTCAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKKSWKI*LSFRES
Trigger: AGACTCCCTGAAAGACAGCCATATCTTCCAGGACTT...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGCCACTCCAAATTTCTaGCAGAATCTTTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTATPNF*QNLSAY
Trigger: ATAAGCTGAAAGATTCTGCCAGAAATTTGGAGTGGC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTTCTGGGGAAATCTTCTaGCCATCTTTGGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFSGEIF*PSLGAS
Trigger: TGAGGCACCCAAAGATGGCCAGAAGATTTCCCCAGA...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTCCACTTCCTCAATTGTaGTCGCTGGGGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGPLPQL*SLGCRA
Trigger: TGCTCTGCACCCCAGCGACCACAATTGAGGAAGTGG...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCCGTGTGCACAGGCTCTaGAAGAACTCCTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCRVHRL*KNSSAW
Trigger: CCAGGCAGAGGAGTTCTTCCAGAGCCTGTGCACACG...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTTCGGGAGCGGGGCCTaGGGCACCAGGGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQFGSGA*GTRGTL
Trigger: CAAAGTGCCCCTGGTGCCCCAGGCCCCGCTCCCGAA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCCTTGGAGTAGATCATaGATGGTGTTGTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEPWSRS*MVLSLH
Trigger: ATGGAGGGACAACACCATCCATGATCTACTCCAAGG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACACAGCTTCTGTTGTGTTaGCTTCATCAAAGAACAAGA +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTQLLLC*LHQRTR
Trigger: TCTTGTTCTTTGATGAAGCCAACACAACAGAAGCTG...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGCTGCCGCAGAGGGATaGAGCCCAGCCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEAAAEG*SPACLQ
Trigger: CTGCAGACAGGCTGGGCTCCATCCCTCTGCGGCAGC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGTCACACAAGTCTCACTaGGATTCACAGAGACGGAGT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGESHKSH*DSQRRS
Trigger: ACTCCGTCTCTGTGAATCCCAGTGAGACTTGTGTGA...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGATCTAGAGCCCAGTTaGAAATGCCAACAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKDLEPS*KCQQSQ
Trigger: TTGGCTTTGTTGGCATTTCCAACTGGGCTCTAGATC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAAGGACATCTCACTGTTaGACCTTGTGTTATTCAACA +
Preference number: 4 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTRTSHC*TLCYST
Trigger: TGTTGAATAACACAAGGTCCAACAGTGAGATGTCCT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGCTGTAACCAAGCCTTaGGGCTTGGCTTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGAVTKP*GLASGG
Trigger: ACCTCCTGAAGCCAAGCCCCAAGGCTTGGTTACAGC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGCAGACGAGCTCCAGTaGCGTGGACAGATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGADELQ*RGQILH
Trigger: GTGAAGAATCTGTCCACGCCACTGGAGCTCGTCTGC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAATGGCAGATGAAACATaGCTGAATACCAAACCTGCT +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPMADET*LNTKPA
Trigger: AGCAGGTTTGGTATTCAGCCATGTTTCATCTGCCAT...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTGTTCACGATGTTTCTaGGAAGCATCTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYCSRCF*EASLSS
Trigger: GCTGCTGAGAGATGCTTCCCAGAAACATCGTGAACA...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCACGGATGACAGGAGTCTaGTCAACAACATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPRMTGV*STTSSN
Trigger: ATTTGATGATGTTGTTGACCAGACTCCTGTCATCCG...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTTCCTGCCCAGCATCTTaGTTAGCTGCTCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGSCPAS*LAAPGL
Trigger: GAGACCTGGAGCAGCTAACCAAGATGCTGGGCAGGA...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGGTGGACCACATGGATaGTCTCGTCGGCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHGGPHG*SRRHSC
Trigger: GCAGGAGTGCCGACGAGACCATCCATGTGGTCCACC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGAAGAGCATTTATAGCTaGCAAGTTTTTGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLKSIYS*QVFVKM
Trigger: CATCTTGACAAAAACTTGCCAGCTATAAATGCTCTT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCTTGGTACTGGCAGTTaGAGAGGATCAGTGGATTCA +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGELGTGS*RGSVDS
Trigger: TGAATCCACTGATCCTCTCCAACTGCCAGTACCAAG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CAA 72 bp GGTTGGCAGTGGCTCATGGTGGGTTTACATGGTGGGTaGTTCATGAGGCTTTACAGCTTTTATCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: GWQWLMVGLHGG*FMRLYSFYQHL
Trigger: AAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCACCATGTAAACCCACCATGAGCCACTGCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCAGAGGAAGGTGCCTCTaGGGAAGAAATGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCRGRCL*GRNGAL
Trigger: CAGGGCACCATTTCTTCCTCAGAGGCACCTTCCTCT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACATTATGTCATCATACTaGTGCCAGTCTCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYIMSSY*CQSPLP
Trigger: GGGCAATGGAGACTGGCATCAGTATGATGACATAAT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGAGATGCGGTCCAGCATaGCCACAGCAGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILRCGPA*PQQPAS
Trigger: AGAAGCAGGCTGCTGTGGTCATGCTGGACCGCATCT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTATTGCTGAGGTCTTaGGAGTGGATTATTTCAATG +
Preference number: 4 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSLLLRS*EWIISM
Trigger: CATTGAAATAATCCACTCTCAAGACCTCAGCAATAA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGTCATTCTCTCCCGCTaGGATGGAGGCCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHVILSR*DGGQVH
Trigger: GTGGACTTGGCCTCCATCTCAGCGGGAGAGAATGAC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGGGCGAGGGACAGAGATaGGAGCTCCACAGATCCATG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILGEGQR*ELHRSM
Trigger: CATGGATCTGTGGAGCTCTCATCTCTGTCCCTCGCC...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCAGCTGTGTAGAAGTTaGGGTAAAAGTGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEQLCRS*GKSVQL
Trigger: GAGCTGAACACTTTTACCTCAACTTCTACACAGCTG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATTCCAGTCTGAACTaGAGTGCTGATATCAATGTG +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPNSSLN*SADINV
Trigger: CACATTGATATCAGCACTTCAGTTCAGACTGGAATT...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTCCAGGTTCTGCTGCTaGTGGAACCGTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYSRFCC*WNRFKY
Trigger: GTATTTAAAACGGTTCCATCAGCAGCAGAACCTGGA...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGATCCTGGACATGTGTaGCCTCATCCAGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHDPGHV*PHPGWP
Trigger: GGGCCATCCTGGATGAGGTCACACATGTCCAGGATC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTCCTCAGCACTCTCTATaGGCTCTTTCTCGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGPQHSL*ALSRWD
Trigger: GTCCCAACGAGAAAGAGCTCATAGAGAGTGCTGAGG...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTCGCAGCCTCCCTGGTaGCCCACTCCTTTAAACTGC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHSQPPW*PTPLNC
Trigger: GCAGTTTAAAGGAGTGGGTCACCAGGGAGGCTGCGA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACCAGATGAAACATGGCTaGATACCAAACCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYQMKHG*IPNLLN
Trigger: GTTCAGCAGGTTTGGTATTCAGCCATGTTTCATCTG...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCAGAGGCCTAGGCCCTaGCGCCTTGGAAGGATGACC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEQRPRP*RLGRMT
Trigger: GGTCATCCTTCCAAGGCGTCAGGGCCTAGGCCTCTG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCTCCTCTCTCAGCACTaGCCCCTGCTCAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHLLSQH*PLLSLS
Trigger: GGAAAGACTGAGCAGGGGGCAGTGCTGAGAGAGGAG...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGCAGAGGGCTGCCGCTaGCCTCAGTGTGAACGAAGC +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIAEGCR*PQCERS
Trigger: GCTTCGTTCACACTGAGGGCAGCGGCAGCCCTCTGC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCACTGGGAGCAAGGTTaGTCTGAGCGTCGGTGCGTT +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILHWEQG*SERRCV
Trigger: AACGCACCGACGCTCAGAGCAACCTTGCTCCCAGTG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTAGCAGCCTGCTGGGGTaGAGCCGCCTGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCISSLLG*SRLLGF
Trigger: AAAACCCAGCAGGCGGCTGCACCCCAGCAGGCTGCT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTATGACCACAGCAGCCTaGTTCTTCCCTTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFMTTAA*FFPFNS
Trigger: ACTGTTGAAAGGGAAGAAGCAGGCTGCTGTGGTCAT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTTCACTCTTCCGAGCTaGCTCAGGAGGCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILFTLPS*LRRLST
Trigger: CGTGGAGAGCCTCCTGAGGCAGCTCGGAAGAGTGAA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTCTGGCCATCTTTGGGTaGCTCAATAACGTAGACGCC +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGLAIFG*LNNVDA
Trigger: GGCGTCTACGTTATTGAGGCACCCAAAGATGGCCAG...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCCTCTGTGGAGTAGGTaGGCAATGCCTCGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILPLWSR*AMPRGN
Trigger: GTTACCCCGAGGCATTGCGCACCTACTCCACAGAGG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGGCTCAGAAAGCAGCTaGTGGGGCAACTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFGSESS*WGNFFI
Trigger: TATGAAAAAGTTGCCCCAGCAGCTGCTTTCTGAGCC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCATCTCAAAAGTATGTGTaGTGTCACTGGATTCATGGA +
Preference number: 4 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPSQKYV*CHWIHG
Trigger: TCCATGAATCCAGTGACAGCACACATACTTTTGAGA...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCAAGGGATTTGGAGCTaGCGGGCTTCCCCACTAGGA +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILQGIWS*RASPLG
Trigger: TCCTAGTGGGGAAGCCCGGCAGCTCCAAATCCCTTG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTGCCTCTCTACAGCCTaGAGCACCACAGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHCLSTA*STTEAQ
Trigger: CTGTGCCTCTGTGGTGCTGCAGGCTGTAGAGAGGCA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTCGGAGGTCATCAATATaGACAGACCGCCATAGCCCT +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGRRSSI*TDRHSP
Trigger: AGGGCTATGGCGGTCTGTGCATATTGATGACCTCCG...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGTTCCTCACCTGCTGTaGAATGACTTTCCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFVPHLL*NDFPGK
Trigger: TTTCCCAGGAAAGTCATTGCACAGCAGGTGAGGAAC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGGTAATGGAGCCTTCTaGGAAGCATCAGTCATCTTA +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYGNGAF*EASVIL
Trigger: TAAGATGACTGATGCTTCCCAGAAGGCTCCATTACC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGGCCGCAGCATCAATTaGCGGCACTTTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGGRSIN*RHFLLL
Trigger: CAAGAGAAGAAAGTGCCGCCAATTGATGCTGCGGCC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTTCTTGGAGTTCTTCTTaGGTGGAGACTTCTGCATGC +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFSWSSS*VETSAC
Trigger: GCATGCAGAAGTCTCCACCCAAGAAGAACTCCAAGA...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGCCAGTTTCTCGTGGTaGCCAGGGCCTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIASFSW*PGPPEG
Trigger: CCCTTCAGGAGGCCCTGGCCACCACGAGAAACTGGC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGAAGTCCTGGAAGATATaGCTGTCTTTCAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEKSWKI*LSFRES
Trigger: AGACTCCCTGAAAGACAGCCATATCTTCCAGGACTT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGTATTCCAAGACCTCTaGAAGCGAAACCTTCAACTC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYVFQDL*KRNLQL
Trigger: GAGTTGAAGGTTTCGCTTCCAGAGGTCTTGGAATAC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGGCAACACCTCCGAGTaGCCACACAAGATCAGGTTA +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGGNTSE*PHKIRL
Trigger: TAACCTGATCTTGTGTGGCCACTCGGAGGTGTTGCC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCCCACTTCCTCAATTGTaGTCGCTGGGGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCPLPQL*SLGCRA
Trigger: TGCTCTGCACCCCAGCGACCACAATTGAGGAAGTGG...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACCATCAAAGAACAAGATaGTATCCAGCTTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYHQRTR*YPACAG
Trigger: CCCAGCACAAGCTGGATACCATCTTGTTCTTTGATG...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGCCAATTCCTTTGACTaGCTTGTCTCTATCTCCATC +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYANSFD*LVSISI
Trigger: GATGGAGATAGAGACAAGCCAGTCAAAGGAATTGGC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGAATGGTCAAAATTCTaGAGAAGTTCTGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYEWSKF*RSSVAG
Trigger: CCCGGCTACAGAACTTCTCCAGAATTTTGACCATTC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTTGTTCACGATGTTTCTaGGAAGCATCTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFCSRCF*EASLSS
Trigger: GCTGCTGAGAGATGCTTCCCAGAAACATCGTGAACA...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGTCTTCAGGCATTGTTaGAAGAAAAGCATTCGCCAT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKVFRHC*KKSIRH
Trigger: ATGGCGAATGCTTTTCTTCCAACAATGCCTGAAGAC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGGGCTCCCCAACACGTaGCCAGTCTGCGTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEGLPNT*PVCVLS
Trigger: GGACAGAACGCAGACTGGCCACGTGTTGGGGAGCCC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCTTGGTACTGGCAGTTaGAGAGGATCAGTGGATTCA +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFLGTGS*RGSVDS
Trigger: TGAATCCACTGATCCTCTCCAACTGCCAGTACCAAG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTAGCACAATCATCTCATaGAGCTCCAGGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGSTIIS*SSRRKA
Trigger: CGCCTTCCTCCTGGAGCTCCATGAGATGATTGTGCT...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGTGCCTGTTCATAGATaGACTCATATTCCACAGTAT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKVPVHR*THIPQY
Trigger: ATACTGTGGAATATGAGTTCATCTATGAACAGGCAC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCAAGAGGGACCACGCTaGGCCAGGAGCGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLQEGPR*ARSGRG
Trigger: ACCTCTTCCGCTCCTGGCTCAGCGTGGTCCCTCTTG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGCACTTTGTACTGGCTaGAGGTGGAGGGGATATAGC +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCALCTG*RWRGYS
Trigger: GCTATATCCCCTCCACCTTCAGCCAGTACAAAGTGC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGTCATGTGGTCACCATTaGAGAAAACATATGGATGGG +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGESCGHH*RKHMDG
Trigger: CCCATCCATATGTTTTCTTCAATGGTGACCACATGA...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCAGATGAAACATGGCTaGATACCAAACCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFQMKHG*IPNLLN
Trigger: GTTCAGCAGGTTTGGTATTCAGCCATGTTTCATCTG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGCCATCTTTGACGAATaGGGAGGACAGGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHAIFDE*GGQGSG
Trigger: ACCTGAGCCCTGTCCTCCGCATTCGTCAAAGATGGC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGAGCTTATCGGGAAGGTaGTGGTCATTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILSLSGR*WSLSRA
Trigger: GGCCCTGGACAATGACCAGCACCTTCCCGATAAGCT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTCTTCCAGCAGGGGGTaGAGAGTCTTCAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILSSSRG*RVFRGI
Trigger: AATGCCCCTGAAGACTCTGCACCCCCTGCTGGAAGA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGATTCATGATGGGTCATaGGCAGGTGGGCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILIHDGS*AGGPGG
Trigger: TCCTCCAGGCCCACCTGCGCATGACCCATCATGAAT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGATGCCTGAAGGTGCCTaGCTCCTGCAGGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEMPEGA*LLQGIL
Trigger: CAGGATGCCCTGCAGGAGGCAGGCACCTTCAGGCAT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGTTTTACTCATTTGGGTaGTCCAGGAGGCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEFYSFG*SRRHWN
Trigger: ATTCCAATGCCTCCTGGACCACCCAAATGAGTAAAA...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCATACTTATAAGGGATaGGTTTGTCCAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFHTYKG*VCPGSV
Trigger: GACAGAGCCTGGACAAACCCATCCCTTATAAGTATG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGGAGTTCTTCTTGGGTaGAGACTTCTGCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGGVLLG*RLLHAG
Trigger: ACCTGCATGCAGAAGTCTCCACCCAAGAAGAACTCC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGGAATCTCAAAGAACTaGTGGTTAGCTGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEGISKN*WLAVML
Trigger: CAACATCACAGCTAACCACCAGTTCTTTGAGATTCC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTCCCCTGCGACCTTCTaGAACACAGACTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILSPATF*NTDSAV
Trigger: CACTGCTGAGTCTGTGTTCCAGAAGGTCGCAGGGGA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGCCACTCCAAATTTCTaGCAGAATCTTTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKATPNF*QNLSAY
Trigger: ATAAGCTGAAAGATTCTGCCAGAAATTTGGAGTGGC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGACACCTCATCAAAGGTaGGCAGGGGCTGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQTPHQR*AGAAWG
Trigger: CCCCCAGGCAGCCCCTGCCCACCTTTGATGAGGTGT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACAGCTTCTGTTGTGTTaGCTTCATCAAAGAACAAGA +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKQLLLC*LHQRTR
Trigger: TCTTGTTCTTTGATGAAGCCAACACAACAGAAGCTG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGGAGTGCTTCCGATATaGGTTGCAGGCAGCAATGAT +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGGVLPI*VAGSND
Trigger: ATCATTGCTGCCTGCAACCCATATCGGAAGCACTCC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCGGAGGATCATCTCCTaGGAGTGCTTCCGATATGGG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILRRIIS*ECFRYG
Trigger: CCCATATCGGAAGCACTCCCAGGAGATGATCCTCCG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATATGTGTGCTGTCACTaGATTCATGGAGAAACTTGT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKYVCCH*IHGETC
Trigger: ACAAGTTTCTCCATGAATCCAGTGACAGCACACATA...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGATCTAGAGCCCAGTTaGAAATGCCAACAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFDLEPS*KCQQSQ
Trigger: TTGGCTTTGTTGGCATTTCCAACTGGGCTCTAGATC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTATGCGCAGGTGGGCCTaGAGGAAATCTACAAAAGAG +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGMRRWA*RKSTKE
Trigger: CTCTTTTGTAGATTTCCTCCAGGCCCACCTGCGCAT...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTGGGTCATGCGCAGGTaGGCCTGGAGGAAATCTACA +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILWVMRR*AWRKST
Trigger: TGTAGATTTCCTCCAGGCCCACCTGCGCATGACCCA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCCGCCATAGCCCTCCATaGAACCCCACGTATGATGTA +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCRHSPP*NPTYDV
Trigger: TACATCATACGTGGGGTTCCATGGAGGGCTATGGCG...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTACAGTCACAGCTTCTTaGGTCAGAGGCCTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFTVTAS*VRGLFH
Trigger: ATGAAAAAGGCCTCTGACCCAAGAAGCTGTGACTGT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCCGAGCTCCAGTGGCGTaGACAGATTCTTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCRAPVA*TDSSQA
Trigger: AGCTTGTGAAGAATCTGTCCACGCCACTGGAGCTCG...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACATGGCAGATGAAACATaGCTGAATACCAAACCTGCT +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYMADET*LNTKPA
Trigger: AGCAGGTTTGGTATTCAGCCATGTTTCATCTGCCAT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCCCAGCACTTGTCTTCTaGTGTACTGAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCPALVF*CTESSR
Trigger: CCTGGAGGACTCAGTACACCAGAAGACAAGTGCTGG...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGAGAATAAAGACCACTaGGGACTGCCCTCGGTCAGA +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCENKDH*GLPSVR
Trigger: TCTGACCGAGGGCAGTCCCCAGTGGTCTTTATTCTC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTCCTGCCCAGCATCTTaGTTAGCTGCTCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILSCPAS*LAAPGL
Trigger: GAGACCTGGAGCAGCTAACCAAGATGCTGGGCAGGA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCAGCACAATCATCTCATaGAGCTCCAGGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCSTIIS*SSRRKA
Trigger: CGCCTTCCTCCTGGAGCTCCATGAGATGATTGTGCT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTATTTCTTCAGGGAACTaGGACTCCACTTCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFISSGN*DSTSER
Trigger: CCTTTCAGAAGTGGAGTCCCAGTTCCCTGAAGAAAT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
3UTR CAA 72 bp GAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTaGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: EISRHENWKVLC*SVPIPTCSAGE
Trigger: CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGTGCCTGTTCATAGATaGACTCATATTCCACAGTAT +
Preference number: 4 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYVPVHR*THIPQY
Trigger: ATACTGTGGAATATGAGTTCATCTATGAACAGGCAC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCCTCCGTCACGACACTaGCTGCTGCAGAAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIPPSRH*LLQKKE
Trigger: CTCCTTCTTCTGCAGCAGTCAGTGTCGTGACGGAGG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCAATTTCTGCAAGTCTTaGCAGGAGAGCCCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCNFCKS*QESPSS
Trigger: GCTTGAGGGGCTCTCCTGTCAAGACTTGCAGAAATT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTATCTCTTCTCTTGCTTaGGGAACAGCAGATCATCCC +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGISSLA*GTADHP
Trigger: GGGATGATCTGCTGTTCCTCAAGCAAGAGAAGAGAT...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTATCCAGAGTATTCAGTaGCTCTGCTGTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGIQSIQ*LCCLLP
Trigger: TGGCAAGAGACAGCAGAGTCACTGAATACTCTGGAT...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATATCTACAAAGTCTTTaGAGATGGCATCAACTTCAG +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKYLQSL*RWHQLQ
Trigger: CTGAAGTTGATGCCATCTTCAAAGACTTTGTAGATA...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGTCATTCTCTCCCGCTaGGATGGAGGCCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEVILSR*DGGQVH
Trigger: GTGGACTTGGCCTCCATCTCAGCGGGAGAGAATGAC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGCACTTTGTACTGGCTaGAGGTGGAGGGGATATAGC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHALCTG*RWRGYS
Trigger: GCTATATCCCCTCCACCTTCAGCCAGTACAAAGTGC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCACGCCTCACAGTCTTTaGGCTGACAGTTCAGAAACC +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCTPHSL*ADSSET
Trigger: GGTTTCTGAACTGTCAGCTCAAAGACTGTGAGGCGT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTTGAAGGGCACTCTCTaGAGCCTCAGCCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILLKGTL*SLSPSN
Trigger: GTTTGATGGGCTGAGGCTTCAGAGAGTGCCCTTCAA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTTGAAGGGCACTCTCTaGAGCCTCAGCCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHLKGTL*SLSPSN
Trigger: GTTTGATGGGCTGAGGCTTCAGAGAGTGCCCTTCAA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTCTCCCTCTTCCTCATaGACATCTGCGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILSPSSS*TSARQR
Trigger: TCTCTGCCTCGCAGATGTTCATGAGGAAGAGGGAGA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGATCCTGGACATGTGTaGCCTCATCCAGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIDPGHV*PHPGWP
Trigger: GGGCCATCCTGGATGAGGTCACACATGTCCAGGATC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTGGGCTGCACTGGAATaGCACCAAGTGGACCTGTTT +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHWAALE*HQVDLF
Trigger: AAACAGGTCCACTTGGTGTCATTCCAGTGCAGCCCA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTCCAAAGGGTATGCCTaGAGGTGCCTGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCISKGYA*RCLPPA
Trigger: TGCAGGAGGCAGGCACCTTCAGGCATACCCTTTGGA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCCATTGTAGGCATCCTTaGGCAGGTTCATGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCHCRHP*AGSCGS
Trigger: AGAGCCACATGAACCTGCTCAAGGATGCCTACAATG...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTCAGGAGGTCTCCCTTaGGCATTTCAGCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCISGGLP*AFQRRP
Trigger: TGGCCTGCGCTGAAATGCTCAAGGGAGACCTCCTGA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCATGGAAGCTGTACTTaGGAAGCAGTTTTAACAGCA +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFHGSCT*EAVLTA
Trigger: TGCTGTTAAAACTGCTTCTCAAGTACAGCTTCCATG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTGTCTTCTGGTGTACTaGGTCCTCCAGGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHCLLVY*VLQAAD
Trigger: ATCAGCTGCCTGGAGGACTCAGTACACCAGAAGACA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTGTCTTCTGGTGTACTaGGTCCTCCAGGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILCLLVY*VLQAAD
Trigger: ATCAGCTGCCTGGAGGACTCAGTACACCAGAAGACA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCTCCAAGTCCTGGCGTaGACTAGCAGGTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCILQVLA*TSRSSG
Trigger: GCCTGAAGACCTGCTAGTTCACGCCAGGACTTGGAG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGTGGGGTGCAGCCGCCTaGTGGGTTTTCACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLWGAAA*WVFTAA
Trigger: AGCAGCTGTGAAAACCCAGCAGGCGGCTGCACCCCA...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTGGGGTGCAGCCGCCTaGTGGGTTTTCACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQWGAAA*WVFTAA
Trigger: AGCAGCTGTGAAAACCCAGCAGGCGGCTGCACCCCA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGAGAGATCCCAGGTCATaGAGGTCTTGGGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILRDPRS*RSWVQY
Trigger: GTACTGCACCCAAGACCTGCATGACCTGGGATCTCT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTTCTGCATGCAGGTGTaGAGGAGGGGTAAGATACCC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHFCMQV*RRGKIP
Trigger: GGGTATCTTACCCCTCCTGCACACCTGCATGCAGAA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCACAGTTCGAAGAGCTaGCTCACATCTGGCCACTTG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILHSSKS*LTSGHL
Trigger: CAAGTGGCCAGATGTGAGGCAGCTCTTCGAACTGTG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATTTCCAAAATCCACTTaGACAAGGTGTTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKFPKST*TRCFTL
Trigger: AAGAGTGAAACACCTTGTGCAAGTGGATTTTGGAAA...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGCCCCTGCTGTTGATTaGTGTGGCGAGGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEAPAVD*CGEGQR
Trigger: TCTCTGTCCCTCGCCACAGCAATCAACAGCAGGGGC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCTGGCCATCTTTGGGTaGCTCAATAACGTAGACGCC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHLAIFG*LNNVDA
Trigger: GGCGTCTACGTTATTGAGGCACCCAAAGATGGCCAG...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTATAGCTCAGCTGGTCTaGAAACAGCAAGCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGIAQLV*KQQAVD
Trigger: GTCTACAGCTTGCTGTTTGCAGACCAGCTGAGCTAT...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCTGGAAGAACTCCTCTaGCTGGCAGCCCACTTCATA +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILLEELL*LAAHFI
Trigger: TATGAAGTGGGCTGCCAGGCAGAGGAGTTCTTCCAG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCACGGTGCGCTCGTGTaGACAGGCTCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEHGALV*TGSGRT
Trigger: AGTTCTTCCAGAGCCTGTGCACACGAGCGCACCGTG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTTTCAGAGGTCACGATaGCAACACACAGCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILFQRSR*QHTARL
Trigger: GAGACGGGCTGTGTGTTGGCATCGTGACCTCTGAAA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGTCAGAGAAGGCAGCCTaGCCTTGCATGGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAESEKAA*PCMASA
Trigger: GGCAGATGCCATGCAAGGGCAGGCTGCCTTCTCTGA...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTGCCTCTCTACAGCCTaGAGCACCACAGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCICLSTA*STTEAQ
Trigger: CTGTGCCTCTGTGGTGCTGCAGGCTGTAGAGAGGCA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTAGATCCCTACAGCCCTaGCTCTCTACAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIRSLQP*LSTACS
Trigger: GCTGCAGGCTGTAGAGAGGCAGGGCTGTAGGGATCT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGTTCCTCACCTGCTGTaGAATGACTTTCCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGVPHLL*NDFPGK
Trigger: TTTCCCAGGAAAGTCATTGCACAGCAGGTGAGGAAC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAAGCTCCTCTTTGTATTaGACATCAATTTCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKSSSLY*TSISRN
Trigger: ATTTCGGGAAATTGATGTGCAATACAAAGAGGAGCT...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCCTCTGAGGAAGAAATaGTGCCCTGTCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILPLRKK*CPVSSS
Trigger: GGAGGAAGAGACAGGGCACCATTTCTTCCTCAGAGG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGAGATCCAACCTTTTTaGTCCTGGGGGTTCATAGTG +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGEIQPF*SWGFIV
Trigger: CACTATGAACCCCCAGGACCAAAAAGGTTGGATCTC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTCTCTCCCGCTGAGATaGAGGCCAAGTCCACAAACA +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHSLPLR*RPSPQT
Trigger: TGTTTGTGGACTTGGCCTCCATCTCAGCGGGAGAGA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTCTCTCCCGCTGAGATaGAGGCCAAGTCCACAAACA +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILSLPLR*RPSPQT
Trigger: TGTTTGTGGACTTGGCCTCCATCTCAGCGGGAGAGA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCCTTCAGTTCCTCTGTaGAGTAGGTGCGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILPSVPL*SRCAMP
Trigger: AGGCATTGCGCACCTACTCCACAGAGGAACTGAAGG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCTGTGTGGCTCCTCTCTaGAGTCAGCTCCATGTCTAT +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCCVAPL*SQLHVY
Trigger: ATAGACATGGAGCTGACTCCAGAGAGGAGCCACACA...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTCCTTGGAGTAGATCATaGATGGTGTTGTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGPWSRS*MVLSLH
Trigger: ATGGAGGGACAACACCATCCATGATCTACTCCAAGG...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGTATCCAGCTTGTGCTaGGCCTTATTGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCVSSLC*ALLEKA
Trigger: AGCCTTCTCCAATAAGGCCCAGCACAAGCTGGATAC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGTCTTGGCAAGGGATTTaGAGCTGCCGGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAESWQGI*SCRASP
Trigger: TGGGGAAGCCCGGCAGCTCCAAATCCCTTGCCAAGA...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACATCTGGGTGTATTCCTaGTCCTGGGGAAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHIWVYS*SWGKLE
Trigger: CTCCAGCTTTCCCCAGGACCAGGAATACACCCAGAT...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGATCTGGGTGTATTCCTaGTCCTGGGGAAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILIWVYS*SWGKLE
Trigger: CTCCAGCTTTCCCCAGGACCAGGAATACACCCAGAT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGGAGTGACCACATCTTaGACCCGCTTCCAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHGVTTS*TRFQRV
Trigger: TACCCTTTGGAAGCGGGTCCAAGATGTGGTCACTCC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGGGAGTGACCACATCTTaGACCCGCTTCCAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILGVTTS*TRFQRV
Trigger: TACCCTTTGGAAGCGGGTCCAAGATGTGGTCACTCC...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGAGGGCTCTGACCTCCTaGATGACAGATCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILRALTS*MTDLVM
Trigger: CATGACCAGATCTGTCATCCAGGAGGTCAGAGCCCT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGCTTTCCTGTGGTCCTaGGAAACAGTTGGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCAFLWS*ETVGEN
Trigger: GTTCTCACCAACTGTTTCCCAGGACCACAGGAAAGC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGGTGGACCACATGGATaGTCTCGTCGGCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQGGPHG*SRRHSC
Trigger: GCAGGAGTGCCGACGAGACCATCCATGTGGTCCACC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCCTCCGTCACGACACTaGCTGCTGCAGAAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQPPSRH*LLQKKE
Trigger: CTCCTTCTTCTGCAGCAGTCAGTGTCGTGACGGAGG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGGGCGAGGGACAGAGATaGGAGCTCCACAGATCCATG +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLGEGQR*ELHRSM
Trigger: CATGGATCTGTGGAGCTCTCATCTCTGTCCCTCGCC...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTATAACCGGCATCTTCTaGTATTTCTCCTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFITGIF*YFSFKN
Trigger: GTTCTTGAAGGAGAAATATCAGAAGATGCCGGTTAT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCAAAGTTCCGAAGCTCTaGCCAGGAAGGGTTTATGAG +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCKVPKL*PGRVYE
Trigger: CTCATAAACCCTTCCTGGTCAGAGCTTCGGAACTTT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGTGTCTGTGATATACTaGGCCTGCACCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEVSVIY*ACTQSS
Trigger: GGAGCTCTGGGTGCAGGCTCAGTATATCACAGACAC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTAGATGCAGCTGGACATaGGTATTTCTTCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGRCSWT*VFLQGT
Trigger: AGTTCCCTGAAGAAATACTCATGTCCAGCTGCATCT...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCACTGGGAGCAAGGTTaGTCTGAGCGTCGGTGCGTT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQHWEQG*SERRCV
Trigger: AACGCACCGACGCTCAGAGCAACCTTGCTCCCAGTG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCTGGGTTTTCACAGCTaGTGCAAAGTTTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILLGFHS*CKVSAL
Trigger: GAGGGCAGAAACTTTGCAGCAGCTGTGAAAACCCAG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGAGCCCCTCGTCAGTATaGCCTGGAGGACTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQSPSSV*PGGLSS
Trigger: TGAGCTCAGTCCTCCAGGGCATACTGACGAGGGGCT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGATCCCTTCCAGCCATaGTTCTCTGGGAAGCCGATC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEDPFQP*FSGKPI
Trigger: GATCGGCTTCCCAGAGAAGCATGGCTGGAAGGGATC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGAAACGGGGAGGCTCCTaGTTGAGCCTCCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLKRGGS*LSLPSM
Trigger: CATGGAAGGGAGGCTCAAGCAGGAGCCTCCCCGTTT...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTTCACTCTTCCGAGCTaGCTCAGGAGGCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQFTLPS*LRRLST
Trigger: CGTGGAGAGCCTCCTGAGGCAGCTCGGAAGAGTGAA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTCTTCCAGGGCCTTGTaGAGCCAGGCAACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQSSRAL*SQATSS
Trigger: GGAGCTTGTTGCCTGGCTGCACAAGGCCCTGGAAGA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGAGCTTATCGGGAAGGTaGTGGTCATTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAESLSGR*WSLSRA
Trigger: GGCCCTGGACAATGACCAGCACCTTCCCGATAAGCT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGGCCCCTGCTGTTGATTaGTGTGGCGAGGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLAPAVD*CGEGQR
Trigger: TCTCTGTCCCTCGCCACAGCAATCAACAGCAGGGGC...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCCTCTGTGGAGTAGGTaGGCAATGCCTCGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQPLWSR*AMPRGN
Trigger: GTTACCCCGAGGCATTGCGCACCTACTCCACAGAGG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGATATCCATCAGGTACTaGAGAATGAGGAGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEISIRY*RMRSLK
Trigger: TTTCAAACTCCTCATTCTGCAGTACCTGATGGATAT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCAGGCAGCAATGATATaGAGGCCAGAGTCCTCATGT +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILQAAMI*RPESSC
Trigger: ACATGAGGACTCTGGCCTGCATATCATTGCTGCCTG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCCAGGATGGCCCTGCTaGTATTGTATGGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHPGWPC*YCMVWE
Trigger: TTCCCAAACCATACAATAGCAGCAGGGCCATCCTGG...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCCCTTGCATGGCATCTaGCACAATGATCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILPLHGI*HNDLGK
Trigger: CTTGCCAAGATCATTGTGGCAGATGCCATGCAAGGG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGAGATCCCTACAGCCCTaGCTCTCTACAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQRSLQP*LSTACS
Trigger: GCTGCAGGCTGTAGAGAGGCAGGGCTGTAGGGATCT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGTCTCGTCGGCACTCCTaGCCAGCATCTTGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAESRRHS*PASWLA
Trigger: AGCTAACCAAGATGCTGGGCAGGAGTGCCGACGAGA...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCTTGACCAGATCCCTTTaGAGAGCCAATATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCLTRSL*RANISG
Trigger: GCCTGAGATATTGGCTCTGCAAAGGGATCTGGTCAA...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCTCTTGGAGTTCTTCTTaGGTGGAGACTTCTGCATGC +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCSWSSS*VETSAC
Trigger: GCATGCAGAAGTCTCCACCCAAGAAGAACTCCAAGA...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGAGATCCAACCTTTTTaGTCCTGGGGGTTCATAGTG +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCEIQPF*SWGFIV
Trigger: CACTATGAACCCCCAGGACCAAAAAGGTTGGATCTC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTGTGCTGGGCCTTATTaGAGAAGGCTGTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHCAGPY*RRLFSQ
Trigger: CTGAGAGAACAGCCTTCTCCAATAAGGCCCAGCACA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTCATCAAAGAACAAGATaGTATCCAGCTTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGHQRTR*YPACAG
Trigger: CCCAGCACAAGCTGGATACCATCTTGTTCTTTGATG...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTTATGTGTGCTGTCACTaGATTCATGGAGAAACTTGT +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFYVCCH*IHGETC
Trigger: ACAAGTTTCTCCATGAATCCAGTGACAGCACACATA...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTGGAATGACACCAAGTaGACCTGTTTCAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHWNDTK*TCFRQR
Trigger: TCGCTGCCTGAAACAGGTCCACTTGGTGTCATTCCA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGGTGTATTCCTGGTCCTaGGGAAAGCTGGAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILVYSWS*GKLEPK
Trigger: TTTTGGCTCCAGCTTTCCCCAGGACCAGGAATACAC...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACATGCGCAGGTGGGCCTaGAGGAAATCTACAAAAGAG +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHMRRWA*RKSTKE
Trigger: CTCTTTTGTAGATTTCCTCCAGGCCCACCTGCGCAT...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGCCGGTGAATCTGGTTaGGCCAGTAGCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQAGESG*ASSSRL
Trigger: CAACCTGGAGCTACTGGCCCAACCAGATTCACCGGC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGGGCGTGCTTCTCAATaGCTTTCCTGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQGRASQ*LSCGPG
Trigger: CCCAGGACCACAGGAAAGCCATTGAGAAGCACGCCC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGAACAACATCATCAAATaGAGACAGAGACTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGENNIIK*RQRLCV
Trigger: CACACAAAGTCTCTGTCTCCATTTGATGATGTTGTT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGATGAGGTGGACCACATaGATGGTCTCGTCGGCACTC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEMRWTT*MVSSAL
Trigger: GAGTGCCGACGAGACCATCCATGTGGTCCACCTCAT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTAGCTGTTGTCTTCATTaGAAAACTTTTGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFSCCLH*KTFAPC
Trigger: ACACGGTGCAAAAGTTTTCCAATGAAGACAACAGCT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTGCTGCACTTGGTACTaGCAGTTGGAGAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHCCTWY*QLERIS
Trigger: ACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCCACCTTGCTGCACTTaGTACTGGCAGTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEPPCCT*YWQLER
Trigger: CCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGATGAACTGGAGGGGCTaGCTAGTGGGTGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEMNWRG*LVGALS
Trigger: GGACAAAGCACCCACTAGCCAGCCCCTCCAGTTCAT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGTGGCCAACTTGCCTTTaGGTTCAGCTTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEWPTCL*VQLPGL
Trigger: GAGACCAGGAAGCTGAACTCAAAGGCAAGTTGGCCA...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCAGCTGCTTCCACCATaGAAAGGATGCTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLQLLPP*KGCSGP
Trigger: TGGGCCTGAGCATCCTTTTCATGGTGGAAGCAGCTG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTTTATTGCTGAGGTCTTaGGAGTGGATTATTTCAATG +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFLLLRS*EWIISM
Trigger: CATTGAAATAATCCACTCTCAAGACCTCAGCAATAA...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGCCTGGTGCAGGGTGTaGTATTCTTTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIAWCRV*YSLICP
Trigger: TGGGCAGATCAAAGAATATCACACCCTGCACCAGGC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTTCATGTGGTCACCATTaGAGAAAACATATGGATGGG +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGSCGHH*RKHMDG
Trigger: CCCATCCATATGTTTTCTTCAATGGTGACCACATGA...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTACTTGTGTCTGGCAATaGACTGGTCTGCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGTCVWQ*TGLLLH
Trigger: ATGTAAAAGCAGACCAGTTCATTGCCAGACACAAGT...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGTAGTAGTACTCCTGTaGCAGCTGCTTTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHVVVLL*QLLCSE
Trigger: TTCACTGCAAAGCAGCTGTCACAGGAGTACTACTAC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGTTCATCAGGTGTTCCTaGAGCCTCTTGGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEFIRCS*SLLELT
Trigger: CGTGAGCTCCAAGAGGCTTCAGGAACACCTGATGAA...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTCATTTGCCCAGGGATaGGCCAGGTCTGAATGCAAC +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCISFAQG*ARSECN
Trigger: GTTGCATTCAGACCTGGCTCATCCCTGGGCAAATGA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGACAGCACAGAGCGGATaGCAGGAGTCTGGTCAACAA +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAETAQSG*QESGQQ
Trigger: TTGTTGACCAGACTCCTGTCATCCGCTCTGTGCTGT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCATCCCACGCTGGCTTaGGAGTTTCCTCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQHPTLA*EFPHQV
Trigger: TACCTGGTGAGGAAACTCTCAAGCCAGCGTGGGATG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTACAAGCATAGCCAAGTaGGTGAGTAGCCGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCITSIAK*VSSRVR
Trigger: TCTCACCCGGCTACTCACTCACTTGGCTATGCTTGT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGACAAGCATAGCCAAGTaGGTGAGTAGCCGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAETSIAK*VSSRVR
Trigger: TCTCACCCGGCTACTCACTCACTTGGCTATGCTTGT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCATTCTGGAACTGTTTaGCCAGATCCCTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILHSGTV*PDPFAE
Trigger: CTCTGCAAAGGGATCTGGTCAAACAGTTCCAGAATG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGTCAGTCCAGCCTTTCTaGCCAAGTCCTTCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLSVQPF*PSPSPP
Trigger: AGGCGGAGAAGGACTTGGGCAGAAAGGCTGGACTGA...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGGTGGAGACTTCTGCATaGAGGTGTGCAGGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLVETSA*RCAGGV
Trigger: TACCCCTCCTGCACACCTGCATGCAGAAGTCTCCAC...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTTGTGGTCGCTGGGGTaGAGAGCAACACCTCATCAA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCILWSLG*RATPHQ
Trigger: TTGATGAGGTGTTGCTCTGCACCCCAGCGACCACAA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACATAGCTCAGCTGGTCTaGAAACAGCAAGCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHIAQLV*KQQAVD
Trigger: GTCTACAGCTTGCTGTTTGCAGACCAGCTGAGCTAT...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCTGGAAGAACTCCTCTaGCTGGCAGCCCACTTCATA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCILEELL*LAAHFI
Trigger: TATGAAGTGGGCTGCCAGGCAGAGGAGTTCTTCCAG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGATGGTATCCAGCTTGTaGTGGGCCTTATTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILMVSSL*WALLEK
Trigger: CTTCTCCAATAAGGCCCAGCACAAGCTGGATACCAT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGGGTGGAGTGTGGGCTaGACTGGAATGACACCAAGT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQGWSVG*TGMTPS
Trigger: ACTTGGTGTCATTCCAGTGCAGCCCACACTCCACCC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCACTGCTGTAGCTCCTaGACGATGCTCTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQHCCSS*TMLFCH
Trigger: GTGGCAGAAGAGCATCGTGCAGGAGCTACAGCAGTG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGCCAATGAAGACATCTaGAGGACTGTACTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCANEDI*RTVLVS
Trigger: AGACACAAGTACAGTCCTGCAGATGTCTTCATTGGC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGATTCATGATGGGTCATaGGCAGGTGGGCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQIHDGS*AGGPGG
Trigger: TCCTCCAGGCCCACCTGCGCATGACCCATCATGAAT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTATCTCCATCTCCTCCTaGTCAGGTTTGTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIISISS*SGLSSG
Trigger: GCCAGAGGACAAACCTGAGCAGGAGGAGATGGAGAT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCCCTGCACACAGCTCTaGACCAGTCTGGTGGTATCT +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLPCTQL*TSLVVS
Trigger: AGATACCACCAGACTGGTGCAGAGCTGTGTGCAGGG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCAAGCTGTGCTTCTCTaGTGCTTGACTGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIQAVLL*CLTEAA
Trigger: AGCAGCCTCAGTCAAGCAGCAGAGAAGCACAGCTTG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGACTCTGGCCACCTCCTaGAGGTACTCCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQTLATS*RYSTEA
Trigger: TGCTTCAGTGGAGTACCTGCAGGAGGTGGCCAGAGT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCAGAACTCCTCAACATaGTTCAGGAAGCGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEQNSST*FRKRRL
Trigger: CAAGCGGCGCTTCCTGAAGCATGTTGAGGAGTTCTG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTCCTTCTGGAGGAAGTaGCAGAGGACAGGCACCGTT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQSFWRK*QRTGTV
Trigger: AACGGTGCCTGTCCTCTGGCACTTCCTCCAGAAGGA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTTGACCAGATCCCTTTaGAGAGCCAATATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHLTRSL*RANISG
Trigger: GCCTGAGATATTGGCTCTGCAAAGGGATCTGGTCAA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTAGCTCCTCTTTGTATTaGACATCAATTTCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFSSSLY*TSISRN
Trigger: ATTTCGGGAAATTGATGTGCAATACAAAGAGGAGCT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGTTTCTGCCCTCTCCTaGCTTCCTCTGATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEVSALS*LPLIFW
Trigger: CCAGAAGATCAGAGGAAGCCAGGAGAGGGCAGAAAC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGACACAGACTCAGCAGTaGCCATCAGCTGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLTQTQQ*PSAACL
Trigger: AAGGCAGGCAGCTGATGGCCACTGCTGAGTCTGTGT...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTGCCTCGGTTCATCTTaGCAGGATCTAGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCICLGSS*QDLEPS
Trigger: ACTGGGCTCTAGATCCTGCCAAGATGAACCGAGGCA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCACAATCCAGCAGGATaGACCTGGCCTCTTCAGACA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIHNPAG*TWPLQT
Trigger: TGTCTGAAGAGGCCAGGTCCATCCTGCTGGATTGTG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGTGGGTCATGCGCAGGTaGGCCTGGAGGAAATCTACA +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLWVMRR*AWRKST
Trigger: TGTAGATTTCCTCCAGGCCCACCTGCGCATGACCCA...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGCACAGCTCTCATTCTaGTCTCTGAGCATCCCCACA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIAQLSF*SLSIPT
Trigger: TGTGGGGATGCTCAGAGACCAGAATGAGAGCTGTGC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCCAGCACTTGTCTTCTaGTGTACTGAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEPALVF*CTESSR
Trigger: CCTGGAGGACTCAGTACACCAGAAGACAAGTGCTGG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGACCCATTGGCATGGATaGCCCTGCTTGGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLTHWHG*PCLEKL
Trigger: GAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGT...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTGCTCCAGGTCTCTCTaGATGTGCTGCTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCICSRSL*MCCCRK
Trigger: CTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCTGCTCAGGATGAGGTaGACCACATGGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLLLRMR*TTWMVS
Trigger: CGAGACCATCCATGTGGTCCACCTCATCCTGAGCAG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCAGCTGTGTAGAAGTTaGGGTAAAAGTGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHQLCRS*GKSVQL
Trigger: GAGCTGAACACTTTTACCTCAACTTCTACACAGCTG...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGACCTGGGCTTTGGTCTaGAGTGTGAAGAGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLTWALV*SVKSRS
Trigger: ACTCCGACTCTTCACACTTCAGACCAAAGCCCAGGT...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTCTTTTTCATCTCCTCTaGATCTTCCACTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGLFHLL*IFHFHL
Trigger: CAAATGGAAGTGGAAGATTCAGAGGAGATGAAAAAG...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGACTGCCAGAGAGCAATaGTGTGTCTCAGCTGACATC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAETAREQ*CVSADI
Trigger: GATGTCAGCTGAGACACATCATTGCTCTCTGGCAGT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGAGATGCAGCTGGACATaGGTATTTCTTCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILRCSWT*VFLQGT
Trigger: AGTTCCCTGAAGAAATACTCATGTCCAGCTGCATCT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGTTTCTCCAGTTCCTTaGCTGGGTCTGTGGACGAGA +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQVSPVP*LGLWTR
Trigger: TCTCGTCCACAGACCCAGGCAAGGAACTGGAGAAAC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGGTTTTCACAGCTGCTaGAAAGTTTCTGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIGFHSC*KVSALS
Trigger: GGAGAGGGCAGAAACTTTGCAGCAGCTGTGAAAACC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGATGCGGTTCTTGGCTTaGTGGAAAAACCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEMRFLA*WKNPVD
Trigger: GTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCAT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCACGTATCTCTTCTCTTaGTTGAGGAACAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCTYLFS*LRNSRS
Trigger: TGATCTGCTGTTCCTCAAGCAAGAGAAGAGATACGT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTAAAGCTCTTCGGACCTaGAAGATGACCTTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIKALRT*KMTLAE
Trigger: CTCTGCCAAGGTCATCTTGCAGGTCCGAAGAGCTTT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTTGTGGTCGCTGGGGTaGAGAGCAACACCTCATCAA +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQLWSLG*RATPHQ
Trigger: TTGATGAGGTGTTGCTCTGCACCCCAGCGACCACAA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGTTGGAAAGCTTCACTaGAGAACTCCACTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEVGKLH*RTPLGP
Trigger: TGGACCCAGTGGAGTTCTGCAGTGAAGCTTTCCAAC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTTCTCAAAAGTATGTGTaGTGTCACTGGATTCATGGA +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGSQKYV*CHWIHG
Trigger: TCCATGAATCCAGTGACAGCACACATACTTTTGAGA...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCCCTCAAAGAACGTCTaGTGTAGGATTTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLPSKNV*CRICSA
Trigger: GGCGCTGCAAATCCTACAGCAGACGTTCTTTGAGGG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGAGCGCAGGCCATTGCTaGAAATGCATCCAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAESAGHC*KCIQCH
Trigger: ATGACACTGGATGCATTTGCAGCAATGGCCTGCGCT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGTGCCTCCAATTGCTTTaGTTCTGGATGGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLCLQLL*FWMEAA
Trigger: GGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCA...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGACAGAGGAGGATGGTTaGCACATGGACGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQTEEDG*HMDGHF
Trigger: GAAATGGCCGTCCATGTGGCAACCATCCTCCTCTGT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGTTCTGTTCCACGATGTaGTGCAGGTACTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEFCSTM*CRYSTV
Trigger: CACAGTGGAGTACCTGCAGCACATCGTGGAACAGAA...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGACTCGCTACAGAACTTaGGTGCCTTCTCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAETRYRT*VPSLRR
Trigger: TCTCCTCAGAGAAGGCACCCAAGTTCTGTAGCGAGT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTAGGTCATGCAGGTCTTaGGTGCAGTACATCTCGCAT +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIRSCRS*VQYISH
Trigger: ATGCGAGATGTACTGCACCCAAGACCTGCATGACCT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCACTCAGGTAGTCTATaGAGTTCTCCAAGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILHSGSL*SSPSRK
Trigger: CTTCCTACTTGGAGAACTCCATAGACTACCTGAGTG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTTCCTTCTTCATGTTCTaGTTTGAGATCTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGSFFMF*FEIFLS
Trigger: GCTAAGGAAGATCTCAAACCAGAACATGAAGAAGGA...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGGAGTGCTTCCGATATaGGTTGCAGGCAGCAATGAT +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIGVLPI*VAGSND
Trigger: ATCATTGCTGCCTGCAACCCATATCGGAAGCACTCC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCAAAGGAATGAGGCTTaGAGGCAGAGCATGAACACG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIQRNEA*RQSMNT
Trigger: CGTGTTCATGCTCTGCCTCCAAGCCTCATTCCTTTG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCTGTTTCATAGGCCTTaGCAAAGGGTGCAAAATACC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILLFHRP*QRVQNT
Trigger: GGTATTTTGCACCCTTTGCCAAGGCCTATGAAACAG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTGTCTGGCAATGAACTaGTCTGCTTTTACATCTGCG +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILCLAMN*SAFTSA
Trigger: CGCAGATGTAAAAGCAGACCAGTTCATTGCCAGACA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTCGTCAAAGTCTGCCTaGATGACTAGGACTTTACGT +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILSSKSA*MTRTLR
Trigger: ACGTAAAGTCCTAGTCATCCAGGCAGACTTTGACGA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCGCCATAGCCCTCCATaGAACCCCACGTATGATGTA +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQRHSPP*NPTYDV
Trigger: TACATCATACGTGGGGTTCCATGGAGGGCTATGGCG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGACTCTCGAGACATTCTaGAACTGTTTGACCAGATCC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILTLETF*NCLTRS
Trigger: GGATCTGGTCAAACAGTTCCAGAATGTCTCGAGAGT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTATCCAGAGTATTCAGTaGCTCTGCTGTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIIQSIQ*LCCLLP
Trigger: TGGCAAGAGACAGCAGAGTCACTGAATACTCTGGAT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTTATCTACAAAGTCTTTaGAGATGGCATCAACTTCAG +
Preference number: 4 (lower is better)
Translates to: WVVHEALQLLSAPWISLGYLQSL*RWHQLQ
Trigger: CTGAAGTTGATGCCATCTTCAAAGACTTTGTAGATA...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGGGGTGTGATATTCTTTaGTCTGCCCAACACGCTCTG +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLGCDIL*SAQHAL
Trigger: CAGAGCGTGTTGGGCAGATCAAAGAATATCACACCC...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGATGGGAATTCCAGTCTaGACTGAAGTGCTGATATCA +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILMGIPV*TEVLIS
Trigger: TGATATCAGCACTTCAGTTCAGACTGGAATTCCCAT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCTGCAGATTACCATCATaGAGACATTCTCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCCRLPS*RHSPSK
Trigger: CTTTGAAGGAGAATGTCTTCATGATGGTAATCTGCA...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACAATCTTTTGGTAGCTTaGTCTCACCATTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHNLLVA*SHHWSP
Trigger: TGGAGACCAATGGTGAGATCAAGCTACCAAAAGATT...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTATGGTATCCAGCTTGTaGTGGGCCTTATTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIMVSSL*WALLEK
Trigger: CTTCTCCAATAAGGCCCAGCACAAGCTGGATACCAT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCCAGGATGGCCCTGCTaGTATTGTATGGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLPGWPC*YCMVWE
Trigger: TTCCCAAACCATACAATAGCAGCAGGGCCATCCTGG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGAGCGCAGGCCATTGCTaGAAATGCATCCAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQSAGHC*KCIQCH
Trigger: ATGACACTGGATGCATTTGCAGCAATGGCCTGCGCT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTTCACTGCCTCCAATTaGTTTGCTTCTGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIFTASN*FASGWR
Trigger: CCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTTCTGTTCCACGATGTaGTGCAGGTACTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQFCSTM*CRYSTV
Trigger: CACAGTGGAGTACCTGCAGCACATCGTGGAACAGAA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGACTCGCTACAGAACTTaGGTGCCTTCTCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQTRYRT*VPSLRR
Trigger: TCTCCTCAGAGAAGGCACCCAAGTTCTGTAGCGAGT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGCTGTCCAACCACAATaGTGCCATTTTCAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEAVQPQ*CHFQVP
Trigger: GGGAACTTGAAAATGGCACCATTGTGGTTGGACAGC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTGTGTGGCTCCTCTCTaGAGTCAGCTCCATGTCTAT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQCVAPL*SQLHVY
Trigger: ATAGACATGGAGCTGACTCCAGAGAGGAGCCACACA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTGTGCTGGGCCTTATTaGAGAAGGCTGTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQCAGPY*RRLFSQ
Trigger: CTGAGAGAACAGCCTTCTCCAATAAGGCCCAGCACA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGTATCCAGCTTGTGCTaGGCCTTATTGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQVSSLC*ALLEKA
Trigger: AGCCTTCTCCAATAAGGCCCAGCACAAGCTGGATAC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGGCCAAAAATGATCTCTaGTTGCTGACCCTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILAKNDL*LLTLKE
Trigger: TTCTTTGAGGGTCAGCAACCAGAGATCATTTTTGGC...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCCACAAAGAGGGCAATaGAGAAAATGCGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIPQRGQ*RKCGST
Trigger: TGTGGAACCGCATTTTCTCCATTGCCCTCTTTGTGG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCGGATGACAGGAGTCTaGTCAACAACATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHRMTGV*STTSSN
Trigger: ATTTGATGATGTTGTTGACCAGACTCCTGTCATCCG...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGAGTTCTGAGCCTTCCTaGAGCTCTGAGAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLSSEPS*SSERKS
Trigger: TGACTTCCTCTCAGAGCTCCAGGAAGGCTCAGAACT...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGATGGATGGCCCTGCTTaGAGAAGCTCTGCACGAATT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQMDGPA*RSSARI
Trigger: AATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCAT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGAAGCCTTGTGGGTCCTaGACCCAAGGCTTAATGATT +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEKPCGS*TQGLMI
Trigger: AATCATTAAGCCTTGGGTCCAGGACCCACAAGGCTT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCTTGGTACTGGCAGTTaGAGAGGATCAGTGGATTCA +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAELGTGS*RGSVDS
Trigger: TGAATCCACTGATCCTCTCCAACTGCCAGTACCAAG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCAGAGTTCCTGTAGATaGTTCATGAAGTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHQSSCR*FMKSEK
Trigger: TTTCTCTGACTTCATGAATCATCTACAGGAACTCTG...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGATAACCGGCATCTTCTaGTATTTCTCCTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: FISTLDFLGLVWQFSCILITGIF*YFSFKN
Trigger: GTTCTTGAAGGAGAAATATCAGAAGATGCCGGTTAT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACAATTCCAGTCTGAACTaGAGTGCTGATATCAATGTG +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHNSSLN*SADINV
Trigger: CACATTGATATCAGCACTTCAGTTCAGACTGGAATT...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCAAAGTCTGCCTGGATaGCTAGGACTTTACGTTTGC +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQQSLPG*LGLYVC
Trigger: GCAAACGTAAAGTCCTAGTCATCCAGGCAGACTTTG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTCCTTGCACAGTAGCTaGAGAAGGCAATTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQSLHSS*RRQFLS
Trigger: GGACAGAAATTGCCTTCTGCAGCTACTGTGCAAGGA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCTTCTGGCTGGGTGTTaGCACCTTCATTACTTTTCC +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLLLAGC*HLHYFS
Trigger: GGAAAAGTAATGAAGGTGGCAACACCCAGCCAGAAG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGATTCCACAGTATCCTTaGTACTGCCACCACGGTGAA +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLIPQYP*YCHHGE
Trigger: TTCACCGTGGTGGCAGTAGCAAGGATACTGTGGAAT...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGGACTCTGCTGTCTCTTaGCAGAAGTCCTGGAAGATA +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLDSAVS*QKSWKI
Trigger: TATCTTCCAGGACTTCTGGCAAGAGACAGCAGAGTC...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGGCTCAGAAAGCAGCTaGTGGGGCAACTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQGSESS*WGNFFI
Trigger: TATGAAAAAGTTGCCCCAGCAGCTGCTTTCTGAGCC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCATATCCATCAGGTACTaGAGAATGAGGAGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCISIRY*RMRSLK
Trigger: TTTCAAACTCCTCATTCTGCAGTACCTGATGGATAT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGAACACGTGGCCAGTCTaGGTTCTGTCCTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQNTWPV*VLSSLF
Trigger: AAACAATGAGGACAGAACGCAGACTGGCCACGTGTT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGGTAATGGAGCCTTCTaGGAAGCATCAGTCATCTTA +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEGNGAF*EASVIL
Trigger: TAAGATGACTGATGCTTCCCAGAAGGCTCCATTACC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCATACTTATAAGGGATaGGTTTGTCCAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIHTYKG*VCPGSV
Trigger: GACAGAGCCTGGACAAACCCATCCCTTATAAGTATG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTTGCAGACAGTTTCATaGAGGGTCAAACACTCAGTC +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCILQTVS*RVKHSV
Trigger: GACTGAGTGTTTGACCCTCCATGAAACTGTCTGCAA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGCTGTCCAACCACAATaGTGCCATTTTCAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQAVQPQ*CHFQVP
Trigger: GGGAACTTGAAAATGGCACCATTGTGGTTGGACAGC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTCTTGCCAGAAGTCCTaGAAGATATGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCISCQKS*KIWLSF
Trigger: GAAAGACAGCCATATCTTCCAGGACTTCTGGCAAGA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTCACACAAGTCTCACTaGGATTCACAGAGACGGAGT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQSHKSH*DSQRRS
Trigger: ACTCCGTCTCTGTGAATCCCAGTGAGACTTGTGTGA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCTGTTTCATAGGCCTTaGCAAAGGGTGCAAAATACC +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAELFHRP*QRVQNT
Trigger: GGTATTTTGCACCCTTTGCCAAGGCCTATGAAACAG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTATTTCTTCAGGGAACTaGGACTCCACTTCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIISSGN*DSTSER
Trigger: CCTTTCAGAAGTGGAGTCCCAGTTCCCTGAAGAAAT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCAACTTCAGCAAAGGTaGTCTTTCCTGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIQLQQR*SFLTSD
Trigger: ATCTGAAGTCAGGAAAGATCACCTTTGCTGAAGTTG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGATGGGAATTCCAGTCTaGACTGAAGTGCTGATATCA +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEMGIPV*TEVLIS
Trigger: TGATATCAGCACTTCAGTTCAGACTGGAATTCCCAT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGTCCAGGTTCTGCTGCTaGTGGAACCGTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLSRFCC*WNRFKY
Trigger: GTATTTAAAACGGTTCCATCAGCAGCAGAACCTGGA...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGTCTCCAGTAAAAGCTaGCTTGCAAAAGATAGACGC +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQVSSKS*LAKDRR
Trigger: GCGTCTATCTTTTGCAAGTCAGCTTTTACTGGAGAC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGGTCTCCAGTAAAAGCTaGCTTGCAAAAGATAGACGC +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLVSSKS*LAKDRR
Trigger: GCGTCTATCTTTTGCAAGTCAGCTTTTACTGGAGAC...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCTTTGGTCTGAAGTGTaGAGAGTCGGAGTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLLWSEV*RVGVAK
Trigger: TTTTGCTACTCCGACTCTTCACACTTCAGACCAAAG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTAATCTTTTGGTAGCTTaGTCTCACCATTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCINLLVA*SHHWSP
Trigger: TGGAGACCAATGGTGAGATCAAGCTACCAAAAGATT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGAGCCCAGTTGGAAATaGCAACAAAGCCAACTTTTT +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEEPSWK*QQSQLF
Trigger: AAAAAGTTGGCTTTGTTGGCATTTCCAACTGGGCTC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGCCAATGAAGACATCTaGAGGACTGTACTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQANEDI*RTVLVS
Trigger: AGACACAAGTACAGTCCTGCAGATGTCTTCATTGGC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACAGCTCCTCTTTGTATTaGACATCAATTTCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHSSSLY*TSISRN
Trigger: ATTTCGGGAAATTGATGTGCAATACAAAGAGGAGCT...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTCAGAAAGCAGCTGCTaGGGCAACTTTTTCATAACC +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQSESSC*GNFFIT
Trigger: GGTTATGAAAAAGTTGCCCCAGCAGCTGCTTTCTGA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTGTCTGGCAATGAACTaGTCTGCTTTTACATCTGCG +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQCLAMN*SAFTSA
Trigger: CGCAGATGTAAAAGCAGACCAGTTCATTGCCAGACA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGTCTTCAGGCATTGTTaGAAGAAAAGCATTCGCCAT +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIVFRHC*KKSIRH
Trigger: ATGGCGAATGCTTTTCTTCCAACAATGCCTGAAGAC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCAAGAGCATTTATAGCTaGCAAGTTTTTGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCKSIYS*QVFVKM
Trigger: CATCTTGACAAAAACTTGCCAGCTATAAATGCTCTT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
3UTR CAA 72 bp TACCTCGGATCTGAGCTTACACTAACACATCTTTACTaGAAATCTCAAGACATGAGAACTGGAAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: YLGSELTLTHLY*KSQDMRTGKCF
Trigger: AAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTTAGTGTAAGCTCAGATCCGAGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTGCAGATTACCATCATaGAGACATTCTCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCICRLPS*RHSPSK
Trigger: CTTTGAAGGAGAATGTCTTCATGATGGTAATCTGCA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGAGCCCAGTTGGAAATaGCAACAAAGCCAACTTTTT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQEPSWK*QQSQLF
Trigger: AAAAAGTTGGCTTTGTTGGCATTTCCAACTGGGCTC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTATTCAGTGTCATATTaGTGTAGTGACAGCACCACA +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIYSVSY*CSDSTT
Trigger: TGTGGTGCTGTCACTACAGCAATATGACACTGAATA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCTGATGGTGACATTCTaGAGTTTGGTGACATCTGAA +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQLMVTF*SLVTSE
Trigger: TTCAGATGTCACCAAACTGCAGAATGTCACCATCAG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGTTTTACTCATTTGGGTaGTCCAGGAGGCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLFYSFG*SRRHWN
Trigger: ATTCCAATGCCTCCTGGACCACCCAAATGAGTAAAA...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGCCAAAAATGATCTCTaGTTGCTGACCCTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQAKNDL*LLTLKE
Trigger: TTCTTTGAGGGTCAGCAACCAGAGATCATTTTTGGC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGAGGACATCTCACTGTTaGACCTTGTGTTATTCAACA +
Preference number: 4 (lower is better)
Translates to: LYITVGNTTQTVMTLKAERTSHC*TLCYST
Trigger: TGTTGAATAACACAAGGTCCAACAGTGAGATGTCCT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
3UTR CAA 72 bp AGTTCTCTTGTTCCTTCTGGAATGTTCATGAGGCAGTaGACTGACAATCATTCATCAGACTTAAGGAAATTT +
Preference number: 4 (lower is better)
Translates to: SSLVPSGMFMRQ*TDNHSSDLRKF
Trigger: AAATTTCCTTAAGTCTGATGAATGATTGTCAGTCAACTGCCTCATGAACATTCCAGAAGGAACAAGAGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR TCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCTTTTTCATCTCCTCTaGATCTTCCACTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLLFHLL*IFHFHL
Trigger: CAAATGGAAGTGGAAGATTCAGAGGAGATGAAAAAG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGTATTCAGTGTCATATTaGTGTAGTGACAGCACCACA +
Preference number: 4 (lower is better)
Translates to: NTSLLEISRHENWKVLCLYSVSY*CSDSTT
Trigger: TGTGGTGCTGTCACTACAGCAATATGACACTGAATA...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR GCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGAGAAGAGTTTCAAAATaGTTCTCCCAGTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQRRVSK*FSQLFL
Trigger: CAGGAACAACTGGGAGAAGCATTTTGAAACTCTTCT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTAACAACATCATCAAATaGAGACAGAGACTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCINNIIK*RQRLCV
Trigger: CACACAAAGTCTCTGTCTCCATTTGATGATGTTGTT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CCA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGAGCTGTTGTCTTCATTaGAAAACTTTTGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQSCCLH*KTFAPC
Trigger: ACACGGTGCAAAAGTTTTCCAATGAAGACAACAGCT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS GCA 90 bp GCTGGCCAGCCTGCAGGCCTTTGGGGAGTGGCCGCTCCACAGGAGTaGCACCCATCGTGGCCAGATGAGCAAGGCATCTACCCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: AGQPAGLWGVAAPQE*HPSWPDEQGIYPGH
Trigger: ATGCCCTGGGTAGATGCCTTGCTCATCTGGCCACGATGGGTGGCACTCCTGTGGAGCGGCCACTCCCCAAAGGCCTGCAGGCTGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TGCAAGGTCACTGGGAGCAAGGTTGCTCTGAGCGTCGGTGCGTTCTaGAGCCTGACCCTGCAGAGGGCTGCCGCTGCCCTCAGTGTGAAC +
Preference number: 5 (lower is better)
Translates to: CKVTGSKVALSVGAF*SLTLQRAAAALSVN
Trigger: GTTCACACTGAGGGCAGCGGCAGCCCTCTGCAGGGTCAGGCTGCAGAACGCACCGACGCTCAGAGCAACCTTGCTCCCAGTGACCTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TCACTTCTGCAAGGTCACTGGGAGCAAGGTTGCTCTGAGCGTCGGTaGGTTCTGCAGCCTGACCCTGCAGAGGGCTGCCGCTGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: SLLQGHWEQGCSERR*VLQPDPAEGCRCPQ
Trigger: CTGAGGGCAGCGGCAGCCCTCTGCAGGGTCAGGCTGCAGAACGCACCGACGCTCAGAGCAACCTTGCTCCCAGTGACCTTGCAGAAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp AACACCTCCGAGTGGCCACACAAGATCAGGTTAGGCTGGCCAGCCTaGAGGCCTTTGGGGAGTGGCCGCTCCACAGGAGTGCCACCCATC +
Preference number: 5 (lower is better)
Translates to: NTSEWPHKIRLGWPA*RPLGSGRSTGVPPI
Trigger: GATGGGTGGCACTCCTGTGGAGCGGCCACTCCCCAAAGGCCTGCAGGCTGGCCAGCCTAACCTGATCTTGTGTGGCCACTCGGAGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GAGCGTCGGTGCGTTCTGCAGCCTGACCCTGCAGAGGGCTGCCGCTaGCCTCAGTGTGAACGAAGCCATCCTCCATTGGCATGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: ERRCVLQPDPAEGCR*PQCERSHPPLACSL
Trigger: CAGAGAACATGCCAATGGAGGATGGCTTCGTTCACACTGAGGGCAGCGGCAGCCCTCTGCAGGGTCAGGCTGCAGAACGCACCGACGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp AACACCCCGTGGCTCTGCACCCTGAGCAGGCTGCTCAGGATGAGGTaGACCACATGGATGGTCTCGTCGGCACTCCTGCCCAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: NTPWLCTLSRLLRMR*TTWMVSSALLPSIL
Trigger: CAAGATGCTGGGCAGGAGTGCCGACGAGACCATCCATGTGGTCCACCTCATCCTGAGCAGCCTGCTCAGGGTGCAGAGCCACGGGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CACAGTGACTGTATCCCGTGGGTTAAACGCACTTGTAGGCTCCGGTaGAGCAGCCTGCTGGGGTGCAGCCGCCTGCTGGGTTTTCACAGC +
Preference number: 5 (lower is better)
Translates to: HSDCIPWVKRTCRLR*SSLLGCSRLLGFHS
Trigger: GCTGTGAAAACCCAGCAGGCGGCTGCACCCCAGCAGGCTGCTGCACCGGAGCCTACAAGTGCGTTTAACCCACGGGATACAGTCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GACCACATCTTGGACCCGCTTCCAAAGGGTATGCCTGAAGGTGCCTaGCTCCTGCAGGGCATCCTGATTCGCAGCCTCCCTGGTGACCCA +
Preference number: 5 (lower is better)
Translates to: DHILDPLPKGMPEGA*LLQGILIRSLPGDP
Trigger: TGGGTCACCAGGGAGGCTGCGAATCAGGATGCCCTGCAGGAGGCAGGCACCTTCAGGCATACCCTTTGGAAGCGGGTCCAAGATGTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp AAGTCAGCTGCCAAGTCAAGGCATAGGCGGACTCTGGCCACCTCCTaGAGGTACTCCACTGAAGCAATGCGGACGGGCTCCTGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: KSAAKSRHRRTLATS*RYSTEAMRTGSWPC
Trigger: GCAAGGCCAGGAGCCCGTCCGCATTGCTTCAGTGGAGTACCTGCAGGAGGTGGCCAGAGTCCGCCTATGCCTTGACTTGGCAGCTGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TGGCTCTGCACCCTGAGCAGGCTGCTCAGGATGAGGTGGACCACATaGATGGTCTCGTCGGCACTCCTGCCCAGCATCTTGGTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: WLCTLSRLLRMRWTT*MVSSALLPSILVSC
Trigger: GCAGCTAACCAAGATGCTGGGCAGGAGTGCCGACGAGACCATCCATGTGGTCCACCTCATCCTGAGCAGCCTGCTCAGGGTGCAGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGGCTCTGCAGGTAAGCTaGGATGTTCGGGAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLALQVS*DVRERG
Trigger: GCCCCGCTCCCGAACATCCAAGCTTACCTGCAGAGC...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGCTCTGCAGGTAAGCTaGGATGTTCGGGAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRALQVS*DVRERG
Trigger: GCCCCGCTCCCGAACATCCAAGCTTACCTGCAGAGC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGGCTGTCTGCTGGGGTTaGGGGCTTCTGCAGGCCATC +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLAVCWG*GLLQAI
Trigger: GATGGCCTGCAGAAGCCCCAAACCCCAGCAGACAGC...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp GAACTGGAGGGGCTGGCTCCTAGTGGGTGCTTTGTCCCGAAACTCTaGGAAGGAGATTCCTTCAAGGCCTGCCCAGGTGTCCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: ELEGLAPSGCFVPKL*EGDSFKACPGVLGL
Trigger: CAGCCCGAGGACACCTGGGCAGGCCTTGAAGGAATCTCCTTCTCAGAGTTTCGGGACAAAGCACCCACTAGGAGCCAGCCCCTCCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093902.12
CDS TCA 90 bp ACGGGGAGGCTCCTGCTTGAGCCTCCCTTCCATGTCTCCCAGCAATaGTCCCTTCCAGCCATGCTTCTCTGGGAAGCCGATCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: TGRLLLEPPFHVSQQ*SLPAMLLWEADLHQ
Trigger: CTGGTGGAGATCGGCTTCCCAGAGAAGCATGGCTGGAAGGGATCATTGCTGGGAGACATGGAAGGGAGGCTCAAGCAGGAGCCTCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp CGGGCAAGCTCCTCCAAGCAGCGCTGGCGAGGCTCACTGATGTCCTaGAGCAGCTGTTTGGCCTTGATGAACTGTGGGCTGATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: RASSSKQRWRGSLMS*SSCLALMNCGLIWS
Trigger: GGACCAGATCAGCCCACAGTTCATCAAGGCCAAACAGCTGCTTCAGGACATCAGTGAGCCTCGCCAGCGCTGCTTGGAGGAGCTTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TGGGTTAAACGCACTTGTAGGCTCCGGTGCAGCAGCCTGCTGGGGTaGAGCCGCCTGCTGGGTTTTCACAGCTGCTGCAAAGTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: WVKRTCRLRCSSLLG*SRLLGFHSCCKVSA
Trigger: GGCAGAAACTTTGCAGCAGCTGTGAAAACCCAGCAGGCGGCTGCACCCCAGCAGGCTGCTGCACCGGAGCCTACAAGTGCGTTTAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TTGAGCCTCCCTTCCATGTCTCCCAGCAATGATCCCTTCCAGCCATaGTTCTCTGGGAAGCCGATCTCCACCAGCCGTCGCCATACCGCC +
Preference number: 5 (lower is better)
Translates to: LSLPSMSPSNDPFQP*FSGKPISTSRRHTA
Trigger: GGCGGTATGGCGACGGCTGGTGGAGATCGGCTTCCCAGAGAAGCATGGCTGGAAGGGATCATTGCTGGGAGACATGGAAGGGAGGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GCCGGACCACAGCGTCTGGTGTTGCACAATCCAGCAGGATGGACCTaGCCTCTTCAGACACCTTTCGGTACAGCTCCTCCGTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: AGPQRLVLHNPAGWT*PLQTPFGTAPPSDP
Trigger: GGGATCTGACGGAGGAGCTGTACCGAAAGGTGTCTGAAGAGGCCAGGTCCATCCTGCTGGATTGTGCAACACCAGACGCTGTGGTCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CGCTCAGCCGGACCACAGCGTCTGGTGTTGCACAATCCAGCAGGATaGACCTGGCCTCTTCAGACACCTTTCGGTACAGCTCCTCCGTCA +
Preference number: 5 (lower is better)
Translates to: RSAGPQRLVLHNPAG*TWPLQTPFGTAPPS
Trigger: TGACGGAGGAGCTGTACCGAAAGGTGTCTGAAGAGGCCAGGTCCATCCTGCTGGATTGTGCAACACCAGACGCTGTGGTCCGGCTGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp AGACCACTGGGGACTGCCCTCGGTCAGATACTTCTGCTACACCACTaGACTGTGGGCTCCCCAACACGTGGCCAGTCTGCGTTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: RPLGTALGQILLLHH*TVGSPTRGQSAFCP
Trigger: AGGACAGAACGCAGACTGGCCACGTGTTGGGGAGCCCACAGTCCAGTGGTGTAGCAGAAGTATCTGACCGAGGGCAGTCCCCAGTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TCGGCACTCCTGCCCAGCATCTTGGTTAGCTGCTCCAGGTCTCTCTaGATGTGCTGCTGTAGGAAGCCTTGTGGGTCCTGGACCCAAGGC +
Preference number: 5 (lower is better)
Translates to: SALLPSILVSCSRSL*MCCCRKPCGSWTQG
Trigger: GCCTTGGGTCCAGGACCCACAAGGCTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCAGCTAACCAAGATGCTGGGCAGGAGTGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp CTGCAAACAGCAAGCTGTAGACCTTGTGCCCCTGGGAGCCCGAAGTaGGGCAGCGCCGCAGGAGTAGTTCCACTTCCTCAATTGTGGTCG +
Preference number: 5 (lower is better)
Translates to: LQTASCRPCAPGSPK*GSAAGVVPLPQLWS
Trigger: CGACCACAATTGAGGAAGTGGAACTACTCCTGCGGCGCTGCCTCACTTCGGGCTCCCAGGGGCACAAGGTCTACAGCTTGCTGTTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp TTCCAAAGGGTATGCCTGAAGGTGCCTGCCTCCTGCAGGGCATCCTaGTTCGCAGCCTCCCTGGTGACCCACTCCTTTAAACTGCGGACC +
Preference number: 5 (lower is better)
Translates to: FQRVCLKVPASCRAS*FAASLVTHSFKLRT
Trigger: GGTCCGCAGTTTAAAGGAGTGGGTCACCAGGGAGGCTGCGAATCAGGATGCCCTGCAGGAGGCAGGCACCTTCAGGCATACCCTTTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp GTCAGGGCCTGGGGATTGTGGGTGGCTCCCACAAGCATAGCCAAGTaGGTGAGTAGCCGGGTGAGAATAAAGACCACTGGGGACTGCCCT +
Preference number: 5 (lower is better)
Translates to: VRAWGLWVAPTSIAK*VSSRVRIKTTGDCP
Trigger: AGGGCAGTCCCCAGTGGTCTTTATTCTCACCCGGCTACTCACTCACTTGGCTATGCTTGTGGGAGCCACCCACAATCCCCAGGCCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp CATGAACTGGAGGGGCTGGCTAGTGGGTGCTTTGTCCCGAAACTCTaGGAAGGAGATTCCTTCAAGGCCTGCCCAGGTGTCCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: HELEGLASGCFVPKL*EGDSFKACPGVLGL
Trigger: CAGCCCGAGGACACCTGGGCAGGCCTTGAAGGAATCTCCTTCTCAGAGTTTCGGGACAAAGCACCCACTAGCCAGCCCCTCCAGTTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131035.10
CDS GCA 90 bp GCAGCGAAAGAGCTCAGAGAAGGCAGCCTGCCCTTGCATGGCATCTaGCACAATGATCTTGGCAAGGGATTTGGAGCTGCCGGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: AAKELREGSLPLHGI*HNDLGKGFGAAGLP
Trigger: GGGAAGCCCGGCAGCTCCAAATCCCTTGCCAAGATCATTGTGGCAGATGCCATGCAAGGGCAGGCTGCCTTCTCTGAGCTCTTTCGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GCAGAACTCCACTGGGTCCATGGCAGGGTCTGTGTGGCTCCTCTCTaGAGTCAGCTCCATGTCTATCACTTCCTTGGGAGGACGGCAGGT +
Preference number: 5 (lower is better)
Translates to: AELHWVHGRVCVAPL*SQLHVYHFLGRTAG
Trigger: ACCTGCCGTCCTCCCAAGGAAGTGATAGACATGGAGCTGACTCCAGAGAGGAGCCACACAGACCCTGCCATGGACCCAGTGGAGTTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TTGGAGGCAGAGCATGAACACGGTAGACCAGCTGCCGCAGAGGGATaGAGCCCAGCCTGTCTGCAGTCTCCTCTGCACTCACTCTGTATC +
Preference number: 5 (lower is better)
Translates to: LEAEHEHGRPAAAEG*SPACLQSPLHSLCI
Trigger: GATACAGAGTGAGTGCAGAGGAGACTGCAGACAGGCTGGGCTCCATCCCTCTGCGGCAGCTGGTCTACCGTGTTCATGCTCTGCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CCCTGCTGGAATCGAGCGCACTGCTTGAAGGTGCTGATGATACCTTaGGGGGTGGAGTGTGGGCTGCACTGGAATGACACCAAGTGGACC +
Preference number: 5 (lower is better)
Translates to: PCWNRAHCLKVLMIP*GVECGLHWNDTKWT
Trigger: GGTCCACTTGGTGTCATTCCAGTGCAGCCCACACTCCACCCCCCAAGGTATCATCAGCACCTTCAAGCAGTGCGCTCGATTCCAGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CCTCAAAGAACGTCTGCTGTAGGATTTGCAGCGCCACATAGTTCCTaGTCAGCACGAGCAAGTAACGGGACTCAGCGCCGTCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: PQRTSAVGFAAPHSS*SARASNGTQRRPGP
Trigger: GGGGCCTGGACGGCGCTGAGTCCCGTTACTTGCTCGTGCTGACCAGGAACTATGTGGCGCTGCAAATCCTACAGCAGACGTTCTTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp ACCTCCGACTGGAAGACCACAGTCCAGACAGGTGCTCTCTTGCATTaGCCTGCCACACTCTCCCACAGAGCATGGATGGCCTCTGGGACA +
Preference number: 5 (lower is better)
Translates to: TSDWKTTVQTGALLH*PATLSHRAWMASGT
Trigger: TGTCCCAGAGGCCATCCATGCTCTGTGGGAGAGTGTGGCAGGCCAATGCAAGAGAGCACCTGTCTGGACTGTGGTCTTCCAGTCGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GGTGGACCACATGGATGGTCTCGTCGGCACTCCTGCCCAGCATCTTaGTTAGCTGCTCCAGGTCTCTCTGGATGTGCTGCTGTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: GGPHGWSRRHSCPAS*LAAPGLSGCAAVGS
Trigger: GCTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCAGCTAACCAAGATGCTGGGCAGGAGTGCCGACGAGACCATCCATGTGGTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CTGTTCGCAGCCCGGGGGCCCTTGAGCTTGAGCACAATCATCTCATaGAGCTCCAGGAGGAAGGCGTCTAGGCCTGCCTCATTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LFAARGPLSLSTIIS*SSRRKASRPASFRN
Trigger: ATTCCTGAATGAGGCAGGCCTAGACGCCTTCCTCCTGGAGCTCCATGAGATGATTGTGCTCAAGCTCAAGGGCCCCCGGGCTGCGAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGACCTGCAAGATGACCTaGGCAGAGCTGACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLTCKMT*AELTAW
Trigger: CCAGGCTGTCAGCTCTGCCAAGGTCATCTTGCAGGT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGAAGGCAGCCTGCCCTaGCATGGCATCTGCCACAAT +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVREGSLP*HGICHN
Trigger: ATTGTGGCAGATGCCATGCAAGGGCAGGCTGCCTTC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCGGGGGCCCTTGAGCTaGAGCACAATCATCTCATGG +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLRGPLS*STIISW
Trigger: CCATGAGATGATTGTGCTCAAGCTCAAGGGCCCCCG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS TCA 90 bp TGTGCTGCTGGGCGTAGTAGTACTCCTGTGACAGCTGCTTTGCAGTaGACGAGCCTAATGAGGAACCGCTCAGCCGGACCACAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: CAAGRSSTPVTAALQ*TSLMRNRSAGPQRL
Trigger: CAGACGCTGTGGTCCGGCTGAGCGGTTCCTCATTAGGCTCGTTCACTGCAAAGCAGCTGTCACAGGAGTACTACTACGCCCAGCAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp AGGTGCCTGCCTCCTGCAGGGCATCCTGATTCGCAGCCTCCCTGGTaGCCCACTCCTTTAAACTGCGGACCTGGTTCTCTTCTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: RCLPPAGHPDSQPPW*PTPLNCGPGSLLAC
Trigger: ACAAGCAAGAAGAGAACCAGGTCCGCAGTTTAAAGGAGTGGGTCACCAGGGAGGCTGCGAATCAGGATGCCCTGCAGGAGGCAGGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CCTCGGGCTGGCTCTTGGAGTTCTTCTTGGGTGGAGACTTCTGCATaGAGGTGTGCAGGAGGGGTAAGATACCCAGCCAACGGTCACATC +
Preference number: 5 (lower is better)
Translates to: PRAGSWSSSWVETSA*RCAGGVRYPANGHI
Trigger: GATGTGACCGTTGGCTGGGTATCTTACCCCTCCTGCACACCTGCATGCAGAAGTCTCCACCCAAGAAGAACTCCAAGAGCCAGCCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GAAGAACTCCTCTGCCTGGCAGCCCACTTCATAGCTCAGCTGGTCTaGAAACAGCAAGCTGTAGACCTTGTGCCCCTGGGAGCCCGAAGT +
Preference number: 5 (lower is better)
Translates to: EELLCLAAHFIAQLV*KQQAVDLVPLGARS
Trigger: ACTTCGGGCTCCCAGGGGCACAAGGTCTACAGCTTGCTGTTTGCAGACCAGCTGAGCTATGAAGTGGGCTGCCAGGCAGAGGAGTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GTCTTCACGGTGCGCTCGTGTGCACAGGCTCTGGAAGAACTCCTCTaGCTGGCAGCCCACTTCATAGCTCAGCTGGTCTGCAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: VFTVRSCAQALEELL*LAAHFIAQLVCKQQ
Trigger: TTGCTGTTTGCAGACCAGCTGAGCTATGAAGTGGGCTGCCAGGCAGAGGAGTTCTTCCAGAGCCTGTGCACACGAGCGCACCGTGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GGTGAGAATAAAGACCACTGGGGACTGCCCTCGGTCAGATACTTCTaGTACACCACTGGACTGTGGGCTCCCCAACACGTGGCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: GENKDHWGLPSVRYF*YTTGLWAPQHVASL
Trigger: CAGACTGGCCACGTGTTGGGGAGCCCACAGTCCAGTGGTGTAGCAGAAGTATCTGACCGAGGGCAGTCCCCAGTGGTCTTTATTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp ACATGGATGGTCTCGTCGGCACTCCTGCCCAGCATCTTGGTTAGCTaGTCCAGGTCTCTCTGGATGTGCTGCTGTAGGAAGCCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: TWMVSSALLPSILVS*SRSLWMCCCRKPCG
Trigger: CCCACAAGGCTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCAGCTAACCAAGATGCTGGGCAGGAGTGCCGACGAGACCATCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GTGCTCTCTTGCATTGGCCTGCCACACTCTCCCACAGAGCATGGATaGCCTCTGGGACAAGTGTACCAGGTGACATTTTCCAGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: VLSCIGLPHSPTEHG*PLGQVYQVTFSRPL
Trigger: GAGGGGCCTGGAAAATGTCACCTGGTACACTTGTCCCAGAGGCCATCCATGCTCTGTGGGAGAGTGTGGCAGGCCAATGCAAGAGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TGGGGACTGCCCTCGGTCAGATACTTCTGCTACACCACTGGACTGTaGGCTCCCCAACACGTGGCCAGTCTGCGTTCTGTCCTCATTGTT +
Preference number: 5 (lower is better)
Translates to: WGLPSVRYFCYTTGL*APQHVASLRSVLIV
Trigger: AACAATGAGGACAGAACGCAGACTGGCCACGTGTTGGGGAGCCCACAGTCCAGTGGTGTAGCAGAAGTATCTGACCGAGGGCAGTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGGAAGGTGCTGGTCATaGTCCAGGGCCCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTGRCWS*SRALQS
Trigger: ACTCTGGAGGGCCCTGGACAATGACCAGCACCTTCC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGAAGGCAGCCTGCCCTaGCATGGCATCTGCCACAAT +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELEGSLP*HGICHN
Trigger: ATTGTGGCAGATGCCATGCAAGGGCAGGCTGCCTTC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGTGCTGACTTCCTCCTaGTACCTGGCCTCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTVLTSS*YLASGR
Trigger: TCTCCCGGAGGCCAGGTACAAGGAGGAAGTCAGCAC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGCTCTGCAGGAGTTTTaGCTGCTGTGCCACAGGGAA +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRALQEF*LLCHRE
Trigger: TTCCCTGTGGCACAGCAGCAAAAACTCCTGCAGAGC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGTGCTTCTCTGCTGCTaGACTGAGGCTGCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRVLLCC*TEAAQN
Trigger: GTTCTGAGCAGCCTCAGTCAAGCAGCAGAGAAGCAC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGTTGCTGGCCTTGTCCTaGCAGTCACAGAGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRLLALS*QSQSVV
Trigger: GACCACACTCTGTGACTGCAAGGACAAGGCCAGCAA...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGCACAGAGGAGGATGGTaGCCACATGGACGGCCATTT +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRHRGGW*PHGRPF
Trigger: AAATGGCCGTCCATGTGGCAACCATCCTCCTCTGTG...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGCACAGAGGAGGATGGTaGCCACATGGACGGCCATTT +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLHRGGW*PHGRPF
Trigger: AAATGGCCGTCCATGTGGCAACCATCCTCCTCTGTG...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGAGGTGCTCTCTTGCATaGGCCTGCCACACTCTCCCA +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELRCSLA*ACHTLP
Trigger: TGGGAGAGTGTGGCAGGCCAATGCAAGAGAGCACCT...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGTCAGGGCCTGGGGATaGTGGGTGGCTCCCACAAGC +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKVRAWG*WVAPTS
Trigger: GCTTGTGGGAGCCACCCACAATCCCCAGGCCCTGAC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAAGGCTCCAATTGGGGTaGAAGCTGTTCGCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSRLQLG*KLFAAR
Trigger: CCGGGCTGCGAACAGCTTCAACCCCAATTGGAGCCT...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS TCA 90 bp GGTCACGATGCCAACACACAGCCCGTCTCTGAATACAGTTGCTGCTaGCAGGAGCCGCTTCGGGACCTGATAATGGCTCTGCAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: GHDANTQPVSEYSCC*QEPLRDLIMALQVS
Trigger: GCTTACCTGCAGAGCCATTATCAGGTCCCGAAGCGGCTCCTGTCAGCAGCAACTGTATTCAGAGACGGGCTGTGTGTTGGCATCGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp CCTGTCTGCAGTCTCCTCTGCACTCACTCTGTATCCCAAACCTGCTaGCTCCAGGCGGAGGATCATCTCCTGGGAGTGCTTCCGATATGG +
Preference number: 5 (lower is better)
Translates to: PVCSLLCTHSVSQTC*LQAEDHLLGVLPIW
Trigger: CCATATCGGAAGCACTCCCAGGAGATGATCCTCCGCCTGGAGTCAGCAGGTTTGGGATACAGAGTGAGTGCAGAGGAGACTGCAGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp CTACGAGCTGCGCGCTACGGGTGCCATCGTCAAAGTCTGCCTGGATaGCTAGGACTTTACGTTTGCCTGGGTTCGTTAACCAGGAGCGGA +
Preference number: 5 (lower is better)
Translates to: LRAARYGCHRQSLPG*LGLYVCLGSLTRSG
Trigger: TCCGCTCCTGGTTAACGAACCCAGGCAAACGTAAAGTCCTAGTCATCCAGGCAGACTTTGACGATGGCACCCGTAGCGCGCAGCTCGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GAGAGATCCCAGGTCATGCAGGTCTTGGGTGCAGTACATCTCGCATaGATCAGTCCAGCCTTTCTGCCCAAGTCCTTCTCCGCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: ERSQVMQVLGAVHLA*ISPAFLPKSFSASD
Trigger: GTCAGAGGCGGAGAAGGACTTGGGCAGAAAGGCTGGACTGATGCATGCGAGATGTACTGCACCCAAGACCTGCATGACCTGGGATCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CTGGGAAACACCCATTGGCATGGATGGCCCTGCTTGGAGAAGCTCTaGACGAATTCCATCCCACGCTGGCTTGAGAGTTTCCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: LGNTHWHGWPCLEKL*TNSIPRWLESFLTR
Trigger: CCTGGTGAGGAAACTCTCAAGCCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TTAAGACCTCCGACTGGAAGACCACAGTCCAGACAGGTGCTCTCTTaGATTGGCCTGCCACACTCTCCCACAGAGCATGGATGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: LRPPTGRPQSRQVLS*IGLPHSPTEHGWPL
Trigger: CAGAGGCCATCCATGCTCTGTGGGAGAGTGTGGCAGGCCAATGCAAGAGAGCACCTGTCTGGACTGTGGTCTTCCAGTCGGAGGTCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CTCCTGCCCAGCATCTTGGTTAGCTGCTCCAGGTCTCTCTGGATGTaGTGCTGTAGGAAGCCTTGTGGGTCCTGGACCCAAGGCTTAATG +
Preference number: 5 (lower is better)
Translates to: LLPSILVSCSRSLWM*CCRKPCGSWTQGLM
Trigger: CATTAAGCCTTGGGTCCAGGACCCACAAGGCTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCAGCTAACCAAGATGCTGGGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CTTTTCCTAACAGGGGTGGCCAACTTGCCTTTGAGTTCAGCTTCCTaGTCTCCGTGCTTGGAGGCTACAGGGCTCACAGGCGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: LFLTGVANLPLSSAS*SPCLEATGLTGEGF
Trigger: GAAACCCTCGCCTGTGAGCCCTGTAGCCTCCAAGCACGGAGACCAGGAAGCTGAACTCAAAGGCAAGTTGGCCACCCCTGTTAGGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TCCAACACCACCACTGAGACATACTGCCCCAGGTCCTTACCCTGCTaGAATCGAGCGCACTGCTTGAAGGTGCTGATGATACCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: SNTTTETYCPRSLPC*NRAHCLKVLMIPWG
Trigger: CCCCCAAGGTATCATCAGCACCTTCAAGCAGTGCGCTCGATTCCAGCAGGGTAAGGACCTGGGGCAGTATGTCTCAGTGGTGGTGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp ACAGGTGCTCTCTTGCATTGGCCTGCCACACTCTCCCACAGAGCATaGATGGCCTCTGGGACAAGTGTACCAGGTGACATTTTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: TGALLHWPATLSHRA*MASGTSVPGDIFQA
Trigger: GGCCTGGAAAATGTCACCTGGTACACTTGTCCCAGAGGCCATCCATGCTCTGTGGGAGAGTGTGGCAGGCCAATGCAAGAGAGCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGTCGAGGATGCGGTTCTaGGCTTGCTGGAAAAACCCA +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRSRMRF*ACWKNP
Trigger: TGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCGA...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGGGAGTCTAGCTTGCTaGCCATTTCTCGGATGTCAG +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRGSLAC*PFLGCQ
Trigger: CTGACATCCGAGAAATGGCAAGCAAGCTAGACTCCC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGGGAGTGACCACATCTaGGACCCGCTTCCAAAGGGT +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTGSDHI*DPLPKG
Trigger: ACCCTTTGGAAGCGGGTCCAAGATGTGGTCACTCCC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGAACCTGCTGAACTTCTaGCTGGCCTTGTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLNLLNF*LALSLQ
Trigger: CTGCAAGGACAAGGCCAGCAAGAAGTTCAGCAGGTT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAGCACAGCTTTGGCCGTaGCATCACGGACAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSAQLWP*HHGQPC
Trigger: ACAAGGCTGTCCGTGATGCAACGGCCAAAGCTGTGC...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCACTCAAGCACAGCTTaGGCCGTTGCATCACGGACA +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELHSSTA*AVASRT
Trigger: TGTCCGTGATGCAACGGCCAAAGCTGTGCTTGAGTG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACAGGGTCAGCCTGGGCTaGCCCTGTAGGAACCGGCTG +
Preference number: 5 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYRVSLG*PCRNRL
Trigger: CAGCCGGTTCCTACAGGGCAAGCCCAGGCTGACCCT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACATGTGCCCAGGAGTCTTaGGTGCTGTGTGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTCAQES*VLCAEL
Trigger: GAGCTCAGCACACAGCACCAAAGACTCCTGGGCACA...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACGGGGGCCCTTGAGCTaGAGCACAATCATCTCATGG +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSRGPLS*STIISW
Trigger: CCATGAGATGATTGTGCTCAAGCTCAAGGGCCCCCG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS TCA 90 bp TCAAAGCTCCTCGAAACACTGTCATGGAGTCCTCCGTCACGACACTaGCTGCTGCAGAAGAAGGAGATCTGCAAACGGGGAGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SKLLETLSWSPPSRH*LLQKKEICKRGGSC
Trigger: GCAGGAGCCTCCCCGTTTGCAGATCTCCTTCTTCTGCAGCAGTCAGTGTCGTGACGGAGGACTCCATGACAGTGTTTCGAGGAGCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp CGCCAGCTCTTTCAGAGGTCACGATGCCAACACACAGCCCGTCTCTaGATACAGTTGCTGCTGACAGGAGCCGCTTCGGGACCTGATAAT +
Preference number: 5 (lower is better)
Translates to: RQLFQRSRCQHTARL*IQLLLTGAASGPDN
Trigger: ATTATCAGGTCCCGAAGCGGCTCCTGTCAGCAGCAACTGTATTCAGAGACGGGCTGTGTGTTGGCATCGTGACCTCTGAAAGAGCTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp CCATCAGGCTTACGTGGTCCTTCCTGTTCCTCACCTGCTGTGCAATaGCTTTCCTGGGAAACACCCATTGGCATGGATGGCCCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: PSGLRGPSCSSPAVQ*LSWETPIGMDGPAW
Trigger: CCAAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGCACAGCAGGTGAGGAACAGGAAGGACCACGTAAGCCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CCATTTTGCCCTCGACGAGAGATCCCAGGTCATGCAGGTCTTGGGTaGAGTACATCTCGCATGCATCAGTCCAGCCTTTCTGCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: PFCPRREIPGHAGLG*STSRMHQSSLSAQV
Trigger: GACTTGGGCAGAAAGGCTGGACTGATGCATGCGAGATGTACTGCACCCAAGACCTGCATGACCTGGGATCTCTCGTCGAGGGCAAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CAGCTCCAGCTGTCCAACCACAATGGTGCCATTTTCAAGTTCCCCTaGGACCTTCTGGAACACAGACTCAGCAGTGGCCATCAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: QLQLSNHNGAIFKFP*DLLEHRLSSGHQLP
Trigger: AGGCAGCTGATGGCCACTGCTGAGTCTGTGTTCCAGAAGGTCGCAGGGGAACTTGAAAATGGCACCATTGTGGTTGGACAGCTGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CATCACAGAGTATCACCAACTGGTAGTCTTCACGGTGCGCTCGTGTaGACAGGCTCTGGAAGAACTCCTCTGCCTGGCAGCCCACTTCAT +
Preference number: 5 (lower is better)
Translates to: HHRVSPTGSLHGALV*TGSGRTPLPGSPLH
Trigger: ATGAAGTGGGCTGCCAGGCAGAGGAGTTCTTCCAGAGCCTGTGCACACGAGCGCACCGTGAAGACTACCAGTTGGTGATACTCTGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TATCCCAAACCTGCTGACTCCAGGCGGAGGATCATCTCCTGGGAGTaGTTCCGATATGGGTTGCAGGCAGCAATGATATGCAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: YPKPADSRRRIISWE*FRYGLQAAMICRPE
Trigger: CTCTGGCCTGCATATCATTGCTGCCTGCAACCCATATCGGAAGCACTCCCAGGAGATGATCCTCCGCCTGGAGTCAGCAGGTTTGGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CTTGAACCCAGGCCGGTGAATCTGGTTGGGCCAGTAGCTCCAGGTTaGCATCTCTATCAATGTGAGCTATCATGCTCGCCAGGATGGGAG +
Preference number: 5 (lower is better)
Translates to: LEPRPVNLVGPVAPG*HLYQCELSCSPGWE
Trigger: CTCCCATCCTGGCGAGCATGATAGCTCACATTGATAGAGATGGCAACCTGGAGCTACTGGCCCAACCAGATTCACCGGCCTGGGTTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TCGGTCCATCAGGCTTACGTGGTCCTTCCTGTTCCTCACCTGCTGTaGAATGACTTTCCTGGGAAACACCCATTGGCATGGATGGCCCTG +
Preference number: 5 (lower is better)
Translates to: SVHQAYVVLPVPHLL*NDFPGKHPLAWMAL
Trigger: CAGGGCCATCCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGCACAGCAGGTGAGGAACAGGAAGGACCACGTAAGCCTGATGGACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TGGGGCTTCTGCAGGCCATCAGAGCATTCCCAATGTCTAGGGTCTTaGACTCAAGCACAGCTTTGGCCGTTGCATCACGGACAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: WGFCRPSEHSQCLGS*TQAQLWPLHHGQPC
Trigger: ACAAGGCTGTCCGTGATGCAACGGCCAAAGCTGTGCTTGAGTGCAAGACCCTAGACATTGGGAATGCTCTGATGGCCTGCAGAAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TGTCCAACCACAATGGTGCCATTTTCAAGTTCCCCTGCGACCTTCTaGAACACAGACTCAGCAGTGGCCATCAGCTGCCTGCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: CPTTMVPFSSSPATF*NTDSAVAISCLPSS
Trigger: GGAGGAAGGCAGGCAGCTGATGGCCACTGCTGAGTCTGTGTTCCAGAAGGTCGCAGGGGAACTTGAAAATGGCACCATTGTGGTTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GGGGTAACCATGGCCATCAGGGAGGAGGAGGCGGAGAACAGTGTCTaGGGAAATCTTCTGGCCATCTTTGGGTGCCTCAATAACGTAGAC +
Preference number: 5 (lower is better)
Translates to: GVTMAIREEEAENSV*GNLLAIFGCLNNVD
Trigger: GTCTACGTTATTGAGGCACCCAAAGATGGCCAGAAGATTTCCCCAGACACTGTTCTCCGCCTCCTCCTCCCTGATGGCCATGGTTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GGTAAGGTCGTTGGAAAGCTTCACTGCAGAACTCCACTGGGTCCATaGCAGGGTCTGTGTGGCTCCTCTCTGGAGTCAGCTCCATGTCTA +
Preference number: 5 (lower is better)
Translates to: GKVVGKLHCRTPLGP*QGLCGSSLESAPCL
Trigger: TAGACATGGAGCTGACTCCAGAGAGGAGCCACACAGACCCTGCCATGGACCCAGTGGAGTTCTGCAGTGAAGCTTTCCAACGACCTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp AGAAGAATGGTGACTCTTCTCATGTTGCGCGCACAGCTCTCATTCTaGTCTCTGAGCATCCCCACAGCACCCTGCACACAGCTCTGCACC +
Preference number: 5 (lower is better)
Translates to: RRMVTLLMLRAQLSF*SLSIPTAPCTQLCT
Trigger: GGTGCAGAGCTGTGTGCAGGGTGCTGTGGGGATGCTCAGAGACCAGAATGAGAGCTGTGCGCGCAACATGAGAAGAGTCACCATTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CACTGTCACACAAGTACCCTTCGGAGCAGACGAGCTCCAGTGGCGTaGACAGATTCTTCACAAGCTGTAACCAAGCCTTGGGGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: HCHTSTLRSRRAPVA*TDSSQAVTKPWGLA
Trigger: AGCCAAGCCCCAAGGCTTGGTTACAGCTTGTGAAGAATCTGTCCACGCCACTGGAGCTCGTCTGCTCCGAAGGGTACTTGTGTGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GGATGGCCCTGCTTGGAGAAGCTCTGCACGAATTCCATCCCACGCTaGCTTGAGAGTTTCCTCACCAGGTACACCCTGTGCCAATCATTG +
Preference number: 5 (lower is better)
Translates to: GWPCLEKLCTNSIPR*LESFLTRYTLCQSL
Trigger: CAATGATTGGCACAGGGTGTACCTGGTGAGGAAACTCTCAAGCCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp ACCTGCTGTGCAATGACTTTCCTGGGAAACACCCATTGGCATGGATaGCCCTGCTTGGAGAAGCTCTGCACGAATTCCATCCCACGCTGG +
Preference number: 5 (lower is better)
Translates to: TCCAMTFLGNTHWHG*PCLEKLCTNSIPRW
Trigger: CCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGCACAGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CCTCACCTGCTGTGCAATGACTTTCCTGGGAAACACCCATTGGCATaGATGGCCCTGCTTGGAGAAGCTCTGCACGAATTCCATCCCACG +
Preference number: 5 (lower is better)
Translates to: PHLLCNDFPGKHPLA*MALLGEALHEFHPT
Trigger: CGTGGGATGGAATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGCACAGCAGGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GTCAGCCTGGGCTTGCCCTGTAGGAACCGGCTGCTGATCTGCCGTTaGATCTTCTCTAGATCAAACTCTTGTGAGGTTTCCCCACCTTGC +
Preference number: 5 (lower is better)
Translates to: VSLGLPCRNRLLICR*IFSRSNSCEVSPPC
Trigger: GCAAGGTGGGGAAACCTCACAAGAGTTTGATCTAGAGAAGATCCAACGGCAGATCAGCAGCCGGTTCCTACAGGGCAAGCCCAGGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGCTCTTGGAGTTCTTCTaGGGTGGAGACTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRLLEFF*GGDFCM
Trigger: CATGCAGAAGTCTCCACCCAAGAAGAACTCCAAGAG...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGACAAGCCGCTGCATGTaGCTGAAGACCTCTGAAAAC +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLTSRCM*LKTSEN
Trigger: GTTTTCAGAGGTCTTCAGCAACATGCAGCGGCTTGT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGAGATCATGGATGGTGTaGTCCCTCCATGGACCTTCA +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRRSWMV*SLHGPS
Trigger: TGAAGGTCCATGGAGGGACAACACCATCCATGATCT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAAACCACCGGAAAACTTaGACACAGCGCTCCACGTCC +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTNHRKT*TQRSTS
Trigger: GGACGTGGAGCGCTGTGTCAAAGTTTTCCGGTGGTT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACATTGCTGGCCTTGTCCTaGCAGTCACAGAGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTLLALS*QSQSVV
Trigger: GACCACACTCTGTGACTGCAAGGACAAGGCCAGCAA...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGCAGGGGCTTCAAAATTaGGTTGTGTCCACAGAGGAG +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRQGLQN*VVSTEE
Trigger: CTCCTCTGTGGACACAACCAAATTTTGAAGCCCCTG...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAACAGGCACCGTTTCCTaGCCGTTCTTCTGTTCCACG +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSTGTVS*PFFCST
Trigger: CGTGGAACAGAAGAACGGCAAGGAAACGGTGCCTGT...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp AACGTAGACGCCCCTGCTGTTGATTGCTGTGGCGAGGGACAGAGATaGGAGCTCCACAGATCCATGGCTTTCCTTCACTGTCTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: NVDAPAVDCCGEGQR*ELHRSMAFLHCLQP
Trigger: TGGCTGAAGACAGTGAAGGAAAGCCATGGATCTGTGGAGCTCTCATCTCTGTCCCTCGCCACAGCAATCAACAGCAGGGGCGTCTACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp GGCAGGAAGGCACTCATGTACACGAGGGATTGCATCATAATAACCTaGAGCTTGCCCATTAGGCTGGGCTCAGAAAGCAGCTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GRKALMYTRDCIIIT*SLPIRLGSESSCWG
Trigger: GCCCCAGCAGCTGCTTTCTGAGCCCAGCCTAATGGGCAAGCTTCAGGTTATTATGATGCAATCCCTCGTGTACATGAGTGCCTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp GGATCATCTCCTGGGAGTGCTTCCGATATGGGTTGCAGGCAGCAATaGTATGCAGGCCAGAGTCCTCATGTAGGTGCTCACCATCCACTG +
Preference number: 5 (lower is better)
Translates to: GSSPGSASDMGCRQQ*YAGQSPHVGAHHPL
Trigger: CAGTGGATGGTGAGCACCTACATGAGGACTCTGGCCTGCATATCATTGCTGCCTGCAACCCATATCGGAAGCACTCCCAGGAGATGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp GCCCTGCCTCTCTACAGCCTGCAGCACCACAGAGGCACAGGCATCTaGATGGTAGCCAATGAAGACATCTGCAGGACTGTACTTGTGTCT +
Preference number: 5 (lower is better)
Translates to: ALPLYSLQHHRGTGI*MVANEDICRTVLVS
Trigger: AGACACAAGTACAGTCCTGCAGATGTCTTCATTGGCTACCATTCAGATGCCTGTGCCTCTGTGGTGCTGCAGGCTGTAGAGAGGCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp CAAGCTGTAACCAAGCCTTGGGGCTTGGCTTCAGGAGGTCTCCCTTaGGCATTTCAGCGCAGGCCATTGCTGCAAATGCATCCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: QAVTKPWGLASGGLP*AFQRRPLLQMHPVS
Trigger: TGACACTGGATGCATTTGCAGCAATGGCCTGCGCTGAAATGCTCAAGGGAGACCTCCTGAAGCCAAGCCCCAAGGCTTGGTTACAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp GGCTTGAGAGTTTCCTCACCAGGTACACCCTGTGCCAATCATTGTTaGCGCGTGTGCAGAACTCCTCAACATGCTTCAGGAAGCGCCGCT +
Preference number: 5 (lower is better)
Translates to: GLRVSSPGTPCANHC*RVCRTPQHASGSAA
Trigger: AGCGGCGCTTCCTGAAGCATGTTGAGGAGTTCTGCACACGCGTCAACAATGATTGGCACAGGGTGTACCTGGTGAGGAAACTCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp GCCCTGCTTGGAGAAGCTCTGCACGAATTCCATCCCACGCTGGCTTaGGAGTTTCCTCACCAGGTACACCCTGTGCCAATCATTGTTGAC +
Preference number: 5 (lower is better)
Translates to: ALLGEALHEFHPTLA*EFPHQVHPVPIIVD
Trigger: GTCAACAATGATTGGCACAGGGTGTACCTGGTGAGGAAACTCTCAAGCCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCCAAGCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TGGCTCTTGGAGTTCTTCTTGGGTGGAGACTTCTGCATGCAGGTGTaGAGGAGGGGTAAGATACCCAGCCAACGGTCACATCTCTCGTCT +
Preference number: 5 (lower is better)
Translates to: WLLEFFLGGDFCMQV*RRGKIPSQRSHLSS
Trigger: AGACGAGAGATGTGACCGTTGGCTGGGTATCTTACCCCTCCTGCACACCTGCATGCAGAAGTCTCCACCCAAGAAGAACTCCAAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GACTCTGGTGCTCGAGGATCAGCTCCAGCTGTCCAACCACAATGGTaGCATTTTCAAGTTCCCCTGCGACCTTCTGGAACACAGACTCAG +
Preference number: 5 (lower is better)
Translates to: DSGARGSAPAVQPQW*HFQVPLRPSGTQTQ
Trigger: CTGAGTCTGTGTTCCAGAAGGTCGCAGGGGAACTTGAAAATGGCACCATTGTGGTTGGACAGCTGGAGCTGATCCTCGAGCACCAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp ATCTCCTGGGAGTGCTTCCGATATGGGTTGCAGGCAGCAATGATATaGAGGCCAGAGTCCTCATGTAGGTGCTCACCATCCACTGTCCGA +
Preference number: 5 (lower is better)
Translates to: ISWECFRYGLQAAMI*RPESSCRCSPSTVR
Trigger: TCGGACAGTGGATGGTGAGCACCTACATGAGGACTCTGGCCTGCATATCATTGCTGCCTGCAACCCATATCGGAAGCACTCCCAGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TCATCCAACACCACCACTGAGACATACTGCCCCAGGTCCTTACCCTaGTGGAATCGAGCGCACTGCTTGAAGGTGCTGATGATACCTTGG +
Preference number: 5 (lower is better)
Translates to: SSNTTTETYCPRSLP*WNRAHCLKVLMIPW
Trigger: CCAAGGTATCATCAGCACCTTCAAGCAGTGCGCTCGATTCCAGCAGGGTAAGGACCTGGGGCAGTATGTCTCAGTGGTGGTGTTGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CAGGAGGTCTCCCTTGAGCATTTCAGCGCAGGCCATTGCTGCAAATaGATCCAGTGTCATTTCACACCCAGCCAAGCTGTGCTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: QEVSLEHFSAGHCCK*IQCHFTPSQAVLLC
Trigger: GCAGAGAAGCACAGCTTGGCTGGGTGTGAAATGACACTGGATGCATTTGCAGCAATGGCCTGCGCTGAAATGCTCAAGGGAGACCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TGTGCAATGACTTTCCTGGGAAACACCCATTGGCATGGATGGCCCTaGTTGGAGAAGCTCTGCACGAATTCCATCCCACGCTGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: CAMTFLGNTHWHGWP*LEKLCTNSIPRWLE
Trigger: CTCAAGCCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CTGCCCAGCATCTTGGTTAGCTGCTCCAGGTCTCTCTGGATGTGCTaGTGTAGGAAGCCTTGTGGGTCCTGGACCCAAGGCTTAATGATT +
Preference number: 5 (lower is better)
Translates to: LPSILVSCSRSLWMC*CRKPCGSWTQGLMI
Trigger: AATCATTAAGCCTTGGGTCCAGGACCCACAAGGCTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCAGCTAACCAAGATGCTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TTGAGGGTCAGCCTGGGCTTGCCCTGTAGGAACCGGCTGCTGATCTaGCGTTGGATCTTCTCTAGATCAAACTCTTGTGAGGTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LRVSLGLPCRNRLLI*RWIFSRSNSCEVSP
Trigger: TGGGGAAACCTCACAAGAGTTTGATCTAGAGAAGATCCAACGGCAGATCAGCAGCCGGTTCCTACAGGGCAAGCCCAGGCTGACCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CCA 90 bp AAAGCTTCACTGCAGAACTCCACTGGGTCCATGGCAGGGTCTGTGTaGCTCCTCTCTGGAGTCAGCTCCATGTCTATCACTTCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: KASLQNSTGSMAGSV*LLSGVSSMSITSLG
Trigger: TCCCAAGGAAGTGATAGACATGGAGCTGACTCCAGAGAGGAGCCACACAGACCCTGCCATGGACCCAGTGGAGTTCTGCAGTGAAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp ACTCTGTATCCCAAACCTGCTGACTCCAGGCGGAGGATCATCTCCTaGGAGTGCTTCCGATATGGGTTGCAGGCAGCAATGATATGCAGG +
Preference number: 5 (lower is better)
Translates to: TLYPKPADSRRRIIS*ECFRYGLQAAMICR
Trigger: CCTGCATATCATTGCTGCCTGCAACCCATATCGGAAGCACTCCCAGGAGATGATCCTCCGCCTGGAGTCAGCAGGTTTGGGATACAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp AGAGTCATTCAGCTGCCCAAAGTCCCATACCAAAGGAATGAGGCTTaGAGGCAGAGCATGAACACGGTAGACCAGCTGCCGCAGAGGGAT +
Preference number: 5 (lower is better)
Translates to: RVIQLPKVPYQRNEA*RQSMNTVDQLPQRD
Trigger: ATCCCTCTGCGGCAGCTGGTCTACCGTGTTCATGCTCTGCCTCCAAGCCTCATTCCTTTGGTATGGGACTTTGGGCAGCTGAATGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CTGGACATGTGTGACCTCATCCAGGATGGCCCTGCTGCTATTGTATaGTTTGGGAAAGCACCTGGCGATGGCAGTGCGGTAGGATGCTTT +
Preference number: 5 (lower is better)
Translates to: LDMCDLIQDGPAAIV*FGKAPGDGSAVGCF
Trigger: AAAGCATCCTACCGCACTGCCATCGCCAGGTGCTTTCCCAAACCATACAATAGCAGCAGGGCCATCCTGGATGAGGTCACACATGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TTGTACCTGGCCTCCGGGAGACTGGCTGTAAAGATGCTCAGGGCCTaGATGTTGTCTTTACCACTGAAGTTCCTGAGGACAGCATGCGTG +
Preference number: 5 (lower is better)
Translates to: LYLASGRLAVKMLRA*MLSLPLKFLRTACV
Trigger: CACGCATGCTGTCCTCAGGAACTTCAGTGGTAAAGACAACATCCAGGCCCTGAGCATCTTTACAGCCAGTCTCCCGGAGGCCAGGTACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GGGCAGACAGACGGGGTCCTGCGCATCTCCATGGCAGATGAAACATaGCTGAATACCAAACCTGCTGAACTTCTTGCTGGCCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: GQTDGVLRISMADET*LNTKPAELLAGLVL
Trigger: AAGGACAAGGCCAGCAAGAAGTTCAGCAGGTTTGGTATTCAGCCATGTTTCATCTGCCATGGAGATGCGCAGGACCCCGTCTGTCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGAACACCTTGAGTTCGTaGATGTCTTCCAGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELNTLSS*MSSRAL
Trigger: CAAGGCCCTGGAAGACATCAACGAACTCAAGGTGTT...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGGACGGCAGGTGACTTaGGGGAAGAGATCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTGRQVT*GKRSRN
Trigger: GTTTCTTGATCTCTTCCCCAAAGTCACCTGCCGTCC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGTTGTGCTGGGCCTTATaGGAGAAGGCTGTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELLCWAL*EKAVLS
Trigger: TGAGAGAACAGCCTTCTCCAATAAGGCCCAGCACAA...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGGTCCTGGGAAACAGTaGGTGAGAACTTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTGPGKQ*VRTCLA
Trigger: TGCCAGACAAGTTCTCACCAACTGTTTCCCAGGACC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGTTCTGCAGCCAGCACTaGTCTTCTGGTGTACTGAGT +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELFCSQH*SSGVLS
Trigger: ACTCAGTACACCAGAAGACAAGTGCTGGCTGCAGAA...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGGATGGAGGCTGCCATaGGGGGAACGGTACAAAGCA +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKGWRLP*GERYKA
Trigger: TGCTTTGTACCGTTCCCCCAATGGCAGCCTCCATCC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGTTTGACCAGATCCCTTaGCAGAGCCAATATCTCAGG +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLFDQIP*QSQYLR
Trigger: CCTGAGATATTGGCTCTGCAAAGGGATCTGGTCAAA...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATGTGCCCAGGAGTCTTaGGTGCTGTGTGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKCAQES*VLCAEL
Trigger: GAGCTCAGCACACAGCACCAAAGACTCCTGGGCACA...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS TCA 90 bp GTGGAAACAGGCCACCCGGTCCACATCAATGTCATTCTCTCCCGCTaGGATGGAGGCCAAGTCCACAAACACCTTGAGTTCGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: VETGHPVHINVILSR*DGGQVHKHLEFVDV
Trigger: GACATCAACGAACTCAAGGTGTTTGTGGACTTGGCCTCCATCTCAGCGGGAGAGAATGACATTGATGTGGACCGGGTGGCCTGTTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp GCTTGTGCTGGGCCTTATTGGAGAAGGCTGTTCTCTCAGCCTCCTTaGCCTTGGAGTAGATCATGGATGGTGTTGTCCCTCCATGGACCT +
Preference number: 5 (lower is better)
Translates to: ACAGPYWRRLFSQPP*PWSRSWMVLSLHGP
Trigger: AGGTCCATGGAGGGACAACACCATCCATGATCTACTCCAAGGTCAAGGAGGCTGAGAGAACAGCCTTCTCCAATAAGGCCCAGCACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp TTTCTGCAGAGTCATTCAGCTGCCCAAAGTCCCATACCAAAGGAATaGGGCTTGGAGGCAGAGCATGAACACGGTAGACCAGCTGCCGCA +
Preference number: 5 (lower is better)
Translates to: FLQSHSAAQSPIPKE*GLEAEHEHGRPAAA
Trigger: TGCGGCAGCTGGTCTACCGTGTTCATGCTCTGCCTCCAAGCCTCATTCCTTTGGTATGGGACTTTGGGCAGCTGAATGACTCTGCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp GAATCTGGTTGGGCCAGTAGCTCCAGGTTGCCATCTCTATCAATGTaGGCTATCATGCTCGCCAGGATGGGAGTGACCACATCTTGGACC +
Preference number: 5 (lower is better)
Translates to: ESGWASSSRLPSLSM*AIMLARMGVTTSWT
Trigger: GGTCCAAGATGTGGTCACTCCCATCCTGGCGAGCATGATAGCTCACATTGATAGAGATGGCAACCTGGAGCTACTGGCCCAACCAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp AGACAGACGGGGTCCTGCGCATCTCCATGGCAGATGAAACATGGCTaGATACCAAACCTGCTGAACTTCTTGCTGGCCTTGTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: RQTGSCASPWQMKHG*IPNLLNFLLALSLQ
Trigger: CTGCAAGGACAAGGCCAGCAAGAAGTTCAGCAGGTTTGGTATTCAGCCATGTTTCATCTGCCATGGAGATGCGCAGGACCCCGTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TATAAGGGATGGGTTTGTCCAGGCTCTGTCTGGGAATGTCCATTTTaGCCTCGACGAGAGATCCCAGGTCATGCAGGTCTTGGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: YKGWVCPGSVWECPF*PRREIPGHAGLGCS
Trigger: ACTGCACCCAAGACCTGCATGACCTGGGATCTCTCGTCGAGGGCAAAATGGACATTCCCAGACAGAGCCTGGACAAACCCATCCCTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GCATCAGCTTATTTAAAAGTTCCTTCAGTTCCTCTGTGGAGTAGGTaGGCAATGCCTCGGGGTAACCATGGCCATCAGGGAGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: ASAYLKVPSVPLWSR*AMPRGNHGHQGGGG
Trigger: GCCTCCTCCTCCCTGATGGCCATGGTTACCCCGAGGCATTGCGCACCTACTCCACAGAGGAACTGAAGGAACTTTTAAATAAGCTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TTCTGGGCGACCACTGTTTTCCAGTTATCTAGGAAGTCCTCCATCTaGCTGCAGAGGGCTCCCAGGAGCTGTATGACATCTCCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: FWATTVFQLSRKSSI*LQRAPRSCMTSPFS
Trigger: AGAGAAGGGAGATGTCATACAGCTCCTGGGAGCCCTCTGCAGGCAGATGGAGGACTTCCTAGATAACTGGAAAACAGTGGTCGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TCATTCTGGTCTCTGAGCATCCCCACAGCACCCTGCACACAGCTCTaGACCAGTCTGGTGGTATCTAGGAACTGTGAACAGTCACAGCTT +
Preference number: 5 (lower is better)
Translates to: SFWSLSIPTAPCTQL*TSLVVSRNCEQSQL
Trigger: AAGCTGTGACTGTTCACAGTTCCTAGATACCACCAGACTGGTGCAGAGCTGTGTGCAGGGTGCTGTGGGGATGCTCAGAGACCAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GAGCAGGAAGTCCTTCAAGTAGCTCTGCAGGAGTTTTTGCTGCTGTaGCACAGGGAACTGAGCGAGAAACACGCCCAAGGGAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: EQEVLQVALQEFLLL*HRELSEKHAQGSFL
Trigger: CAGAAAACTCCCTTGGGCGTGTTTCTCGCTCAGTTCCCTGTGGCACAGCAGCAAAAACTCCTGCAGAGCTACTTGAAGGACTTCCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TGGCTTCAGGAGGTCTCCCTTGAGCATTTCAGCGCAGGCCATTGCTaGAAATGCATCCAGTGTCATTTCACACCCAGCCAAGCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: WLQEVSLEHFSAGHC*KCIQCHFTPSQAVL
Trigger: AAGCACAGCTTGGCTGGGTGTGAAATGACACTGGATGCATTTGCAGCAATGGCCTGCGCTGAAATGCTCAAGGGAGACCTCCTGAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TCCATCCCACGCTGGCTTGAGAGTTTCCTCACCAGGTACACCCTGTaGCAATCATTGTTGACGCGTGTGCAGAACTCCTCAACATGCTTC +
Preference number: 5 (lower is better)
Translates to: SIPRWLESFLTRYTL*QSLLTRVQNSSTCF
Trigger: GAAGCATGTTGAGGAGTTCTGCACACGCGTCAACAATGATTGGCACAGGGTGTACCTGGTGAGGAAACTCTCAAGCCAGCGTGGGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp AGGTATCGGTCCATCAGGCTTACGTGGTCCTTCCTGTTCCTCACCTaGTGTGCAATGACTTTCCTGGGAAACACCCATTGGCATGGATGG +
Preference number: 5 (lower is better)
Translates to: RYRSIRLTWSFLFLT*CAMTFLGNTHWHGW
Trigger: CCATCCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGCACAGCAGGTGAGGAACAGGAAGGACCACGTAAGCCTGATGGACCGATACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp ACAAGGCCAGCAATAAGTAGGCTGTCTGCTGGGGTTTGGGGCTTCTaGAGGCCATCAGAGCATTCCCAATGTCTAGGGTCTTGCACTCAA +
Preference number: 5 (lower is better)
Translates to: TRPAISRLSAGVWGF*RPSEHSQCLGSCTQ
Trigger: TTGAGTGCAAGACCCTAGACATTGGGAATGCTCTGATGGCCTGCAGAAGCCCCAAACCCCAGCAGACAGCCTACTTATTGCTGGCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GTCTGCGTTCTGTCCTCATTGTTTCTGATAGCACTGAAGCCCTCATaGGGCGTGTGGTTAAGACCTCCGACTGGAAGACCACAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: VCVLSSLFLIALKPS*GVWLRPPTGRPQSR
Trigger: TCTGGACTGTGGTCTTCCAGTCGGAGGTCTTAACCACACGCCGCATGAGGGCTTCAGTGCTATCAGAAACAATGAGGACAGAACGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CAGAGGACAGGCACCGTTTCCTTGCCGTTCTTCTGTTCCACGATGTaGTGCAGGTACTCCACTGTGATTTTCCTCCTGCAGCTCCAAATC +
Preference number: 5 (lower is better)
Translates to: QRTGTVSLPFFCSTM*CRYSTVIFLLQLQI
Trigger: GATTTGGAGCTGCAGGAGGAAAATCACAGTGGAGTACCTGCAGCACATCGTGGAACAGAAGAACGGCAAGGAAACGGTGCCTGTCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp AGCTGCTGCAAAGTTTCTGCCCTCTCCTGGCTTCCTCTGATCTTCTaGCTGGGTGTTGCCACCTTCATTACTTTTCCTAACAGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SCCKVSALSWLPLIF*LGVATFITFPNRGG
Trigger: GCCACCCCTGTTAGGAAAAGTAATGAAGGTGGCAACACCCAGCCAGAAGATCAGAGGAAGCCAGGAGAGGGCAGAAACTTTGCAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp ACTGACTCTGGTGCTCGAGGATCAGCTCCAGCTGTCCAACCACAATaGTGCCATTTTCAAGTTCCCCTGCGACCTTCTGGAACACAGACT +
Preference number: 5 (lower is better)
Translates to: TDSGARGSAPAVQPQ*CHFQVPLRPSGTQT
Trigger: AGTCTGTGTTCCAGAAGGTCGCAGGGGAACTTGAAAATGGCACCATTGTGGTTGGACAGCTGGAGCTGATCCTCGAGCACCAGAGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GGATGGCCCTGCTGCTATTGTATGGTTTGGGAAAGCACCTGGCGATaGCAGTGCGGTAGGATGCTTTCTCTTCTAAAGAGGCATGGTAGC +
Preference number: 5 (lower is better)
Translates to: GWPCCYCMVWESTWR*QCGRMLSLLKRHGS
Trigger: GCTACCATGCCTCTTTAGAAGAGAAAGCATCCTACCGCACTGCCATCGCCAGGTGCTTTCCCAAACCATACAATAGCAGCAGGGCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TCTCGTTGGGACTGCCGCGGGACACAAAGATGCCTCGGTTCATCTTaGCAGGATCTAGAGCCCAGTTGGAAATGCCAACAAAGCCAACTT +
Preference number: 5 (lower is better)
Translates to: SRWDCRGTQRCLGSS*QDLEPSWKCQQSQL
Trigger: AAGTTGGCTTTGTTGGCATTTCCAACTGGGCTCTAGATCCTGCCAAGATGAACCGAGGCATCTTTGTGTCCCGCGGCAGTCCCAACGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp ACAGCTTTGGCCGTTGCATCACGGACAGCCTTGTATTCATTACCGTaGACGAGGTATCGGTCCATCAGGCTTACGTGGTCCTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: TALAVASRTALYSLP*TRYRSIRLTWSFLF
Trigger: GAACAGGAAGGACCACGTAAGCCTGATGGACCGATACCTCGTCCACGGTAATGAATACAAGGCTGTCCGTGATGCAACGGCCAAAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGACCTGCAAGATGACCTaGGCAGAGCTGACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGETCKMT*AELTAW
Trigger: CCAGGCTGTCAGCTCTGCCAAGGTCATCTTGCAGGT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAAACACCTTGAGTTCGTaGATGTCTTCCAGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSNTLSS*MSSRAL
Trigger: CAAGGCCCTGGAAGACATCAACGAACTCAAGGTGTT...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGATACTGGTAAGGTCGTaGGAAAGCTTCACTGCAGAA +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLILVRS*ESFTAE
Trigger: TTCTGCAGTGAAGCTTTCCAACGACCTTACCAGTAT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAGTCACCACAAAGTTCTaGAAGCCCCGAAGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSVTTKF*KPRSVS
Trigger: AGACACACTTCGGGGCTTCAAGAACTTTGTGGTGAC...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGTGCTGACTTCCTCCTaGTACCTGGCCTCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFVLTSS*YLASGR
Trigger: TCTCCCGGAGGCCAGGTACAAGGAGGAAGTCAGCAC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCCTCTGCCAATTCCTTaGACTGGCTTGTCTCTATCT +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELPLPIP*TGLSLS
Trigger: AGATAGAGACAAGCCAGTCAAAGGAATTGGCAGAGG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGGGAGTGACCACATCTaGGACCCGCTTCCAAAGGGT +
Preference number: 5 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYGSDHI*DPLPKG
Trigger: ACCCTTTGGAAGCGGGTCCAAGATGTGGTCACTCCC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACATGGATGGCCCTGCTaGGAGAAGCTCTGCACGAAT +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKHGWPC*EKLCTN
Trigger: ATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGAGGTGCTCTCTTGCATaGGCCTGCCACACTCTCCCA +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGERCSLA*ACHTLP
Trigger: TGGGAGAGTGTGGCAGGCCAATGCAAGAGAGCACCT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGACATTCTGGAACTGTTaGACCAGATCCCTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLTFWNC*TRSLCR
Trigger: TCTGCAAAGGGATCTGGTCAAACAGTTCCAGAATGT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACCCCACCTTGCTGCACTaGGTACTGGCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYPTLLH*VLAVGE
Trigger: CTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGGG...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS TCA 90 bp TTCCGAGCTGCCTCAGGAGGCTCTCCACGTATCTCTTCTCTTGCTTaGGGAACAGCAGATCATCCCTTCTCCTTTTCAGCAAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: FRAASGGSPRISSLA*GTADHPFSFSASSS
Trigger: TGAGGAGCTTGCTGAAAAGGAGAAGGGATGATCTGCTGTTCCTCAAGCAAGAGAAGAGATACGTGGAGAGCCTCCTGAGGCAGCTCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp TCTCCAGTGACCGCCTCAGTGCATTCCACGTGGACAGAAAGATGGTaGTTCGGTCATGCAACAGCTTTCTCAGCCCATCTGAACTGTGAC +
Preference number: 5 (lower is better)
Translates to: SPVTASVHSTWTERW*FGHATAFSAHLNCD
Trigger: GTCACAGTTCAGATGGGCTGAGAAAGCTGTTGCATGACCGAATCACCATCTTTCTGTCCACGTGGAATGCACTGAGGCGGTCACTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CACCACCAAGGTATTGTCGTTCTTGAGGTCTCCTTGCACAGTAGCTaGAGAAGGCAATTTCTGTCCGCACTCGCTACAGAACTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: HHQGIVVLEVSLHSS*RRQFLSALATELGC
Trigger: GCACCCAAGTTCTGTAGCGAGTGCGGACAGAAATTGCCTTCTGCAGCTACTGTGCAAGGAGACCTCAAGAACGACAATACCTTGGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GGGGTTGATGACACCACCAAGGTATTGTCGTTCTTGAGGTCTCCTTaGACAGTAGCTGCAGAAGGCAATTTCTGTCCGCACTCGCTACAG +
Preference number: 5 (lower is better)
Translates to: GVDDTTKVLSFLRSP*TVAAEGNFCPHSLQ
Trigger: CTGTAGCGAGTGCGGACAGAAATTGCCTTCTGCAGCTACTGTGCAAGGAGACCTCAAGAACGACAATACCTTGGTGGTGTCATCAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TCCCCTGCGACCTTCTGGAACACAGACTCAGCAGTGGCCATCAGCTaGCTGCCTTCCTCCGTGATGTTGTCTATGATTTTCTCATTGGTT +
Preference number: 5 (lower is better)
Translates to: SPATFWNTDSAVAIS*LPSSVMLSMIFSLV
Trigger: AACCAATGAGAAAATCATAGACAACATCACGGAGGAAGGCAGGCAGCTGATGGCCACTGCTGAGTCTGTGTTCCAGAAGGTCGCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp ACTCTTCCGAGCTGCCTCAGGAGGCTCTCCACGTATCTCTTCTCTTaGTTGAGGAACAGCAGATCATCCCTTCTCCTTTTCAGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: TLPSCLRRLSTYLFS*LRNSRSSLLLFSKL
Trigger: GAGCTTGCTGAAAAGGAGAAGGGATGATCTGCTGTTCCTCAAGCAAGAGAAGAGATACGTGGAGAGCCTCCTGAGGCAGCTCGGAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CCCTGCTGCTATTGTATGGTTTGGGAAAGCACCTGGCGATGGCAGTaGGGTAGGATGCTTTCTCTTCTAAAGAGGCATGGTAGCATACCC +
Preference number: 5 (lower is better)
Translates to: PCCYCMVWESTWRWQ*GRMLSLLKRHGSIP
Trigger: GGGTATGCTACCATGCCTCTTTAGAAGAGAAAGCATCCTACCGCACTGCCATCGCCAGGTGCTTTCCCAAACCATACAATAGCAGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TTGTTGATTTCATTGATGGCAGTATACTTGGCAGAGGCTACGAGCTaGGCGCTACGGGTGCCATCGTCAAAGTCTGCCTGGATGACTAGG +
Preference number: 5 (lower is better)
Translates to: LLISLMAVYLAEATS*ALRVPSSKSAWMTR
Trigger: CCTAGTCATCCAGGCAGACTTTGACGATGGCACCCGTAGCGCGCAGCTCGTAGCCTCTGCCAAGTATACTGCCATCAATGAAATCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CCTGAAGCCTCTTGGAGCTCACGGAGGCAGGACCACAGGGCCATCTaGAGAAACATTAATTCCTCCCTTGAAGACACTTTCATGGTCAAG +
Preference number: 5 (lower is better)
Translates to: PEASWSSRRQDHRAI*RNINSSLEDTFMVK
Trigger: CTTGACCATGAAAGTGTCTTCAAGGGAGGAATTAATGTTTCTGCAGATGGCCCTGTGGTCCTGCCTCCGTGAGCTCCAAGAGGCTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GCGTCTAGGCCTGCCTCATTCAGGAATGTGCCCAGGAGTCTTTGGTaGTGTGTGCTGAGCTCCTCTTTGTATTGCACATCAATTTCCCGA +
Preference number: 5 (lower is better)
Translates to: ASRPASFRNVPRSLW*CVLSSSLYCTSISR
Trigger: TCGGGAAATTGATGTGCAATACAAAGAGGAGCTCAGCACACAGCACCAAAGACTCCTGGGCACATTCCTGAATGAGGCAGGCCTAGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CCA 90 bp TCCTCCTCTTCTCCTTTTTACTCATTTGGGTGGTCCAGGAGGCATTaGAATCGGACTCCTCTGGTTTCTCCAGTTCCTTGCCTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SSSSPFYSFGWSRRH*NRTPLVSPVPCLGL
Trigger: CAGACCCAGGCAAGGAACTGGAGAAACCAGAGGAGTCCGATTCCAATGCCTCCTGGACCACCCAAATGAGTAAAAAGGAGAAGAGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TGTTTCTTTCCCAGCTGTCTTCACCGGACTGGCCGCAGCATCAATTaGCGGCACTTTCTTCTCTTGTCCAGATGTCTCCCCCTTAGATTC +
Preference number: 5 (lower is better)
Translates to: CFFPSCLHRTGRSIN*RHFLLLSRCLPLRF
Trigger: GAATCTAAGGGGGAGACATCTGGACAAGAGAAGAAAGTGCCGCCAATTGATGCTGCGGCCAGTCCGGTGAAGACAGCTGGGAAAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp ACATCTGCGAGGCAGAGAGCACATCTGCAATCACACAAGTCTCACTaGGATTCACAGAGACGGAGTCCACCAGTCTCTGTACGATCTGCT +
Preference number: 5 (lower is better)
Translates to: TSARQRAHLQSHKSH*DSQRRSPPVSVRSA
Trigger: AGCAGATCGTACAGAGACTGGTGGACTCCGTCTCTGTGAATCCCAGTGAGACTTGTGTGATTGCAGATGTGCTCTCTGCCTCGCAGATGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CATCCAGGATGGCCCTGCTGCTATTGTATGGTTTGGGAAAGCACCTaGCGATGGCAGTGCGGTAGGATGCTTTCTCTTCTAAAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: HPGWPCCYCMVWEST*RWQCGRMLSLLKRH
Trigger: ATGCCTCTTTAGAAGAGAAAGCATCCTACCGCACTGCCATCGCCAGGTGCTTTCCCAAACCATACAATAGCAGCAGGGCCATCCTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GATCTGCGGAGGTCATCAATATGCACAGACCGCCATAGCCCTCCATaGAACCCCACGTATGATGTACCGCTTCCCATTCTCGACAGTTTT +
Preference number: 5 (lower is better)
Translates to: DLRRSSICTDRHSPP*NPTYDVPLPILDSF
Trigger: AAAACTGTCGAGAATGGGAAGCGGTACATCATACGTGGGGTTCCATGGAGGGCTATGGCGGTCTGTGCATATTGATGACCTCCGCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TCTCTGAGAACCTGCTCGAGATTTCTGCAGCCAGCACTTGTCTTCTaGTGTACTGAGTCCTCCAGGCAGCTGATGAAGAGCAGGTACAGT +
Preference number: 5 (lower is better)
Translates to: SLRTCSRFLQPALVF*CTESSRQLMKSRYS
Trigger: ACTGTACCTGCTCTTCATCAGCTGCCTGGAGGACTCAGTACACCAGAAGACAAGTGCTGGCTGCAGAAATCTCGAGCAGGTTCTCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp AGTTCCTCAGGGGCTTCAAAATTTGGTTGTGTCCACAGAGGAGGATaGTTGCCACATGGACGGCCATTTCAGTCACCGTTCCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: SSSGASKFGCVHRGG*LPHGRPFQSPFPSG
Trigger: TCCTGAAGGGAACGGTGACTGAAATGGCCGTCCATGTGGCAACCATCCTCCTCTGTGGACACAACCAAATTTTGAAGCCCCTGAGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TCAGATACTTCTGCTACACCACTGGACTGTGGGCTCCCCAACACGTaGCCAGTCTGCGTTCTGTCCTCATTGTTTCTGATAGCACTGAAG +
Preference number: 5 (lower is better)
Translates to: SDTSATPLDCGLPNT*PVCVLSSLFLIALK
Trigger: CTTCAGTGCTATCAGAAACAATGAGGACAGAACGCAGACTGGCCACGTGTTGGGGAGCCCACAGTCCAGTGGTGTAGCAGAAGTATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TTCCCCACCTTGCTGCACTTGGTACTGGCAGTTGGAGAGGATCAGTaGATTCAGATCCCGTTCCACCTCATAACTGATGACATGCAGGTC +
Preference number: 5 (lower is better)
Translates to: FPTLLHLVLAVGEDQ*IQIPFHLITDDMQV
Trigger: GACCTGCATGTCATCAGTTATGAGGTGGAACGGGATCTGAATCCACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGTAAAACTGCAGGAATaGAGTCATGAAACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRVKLQE*SHETLQ
Trigger: CTGCAGAGTTTCATGACTCAATTCCTGCAGTTTTAC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATGGTTAGCTGTGATGTaGCAGACAGTTTCATGGAGG +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSWLAVM*QTVSWR
Trigger: CCTCCATGAAACTGTCTGCAACATCACAGCTAACCA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACCTCCTGAAGGGTGCTaGTCACCAAGTCTTCGTAAG +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKPPEGC*SPSLRK
Trigger: CTTACGAAGACTTGGTGACAAGCACCCTTCAGGAGG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCGCCATATTTTCCCATaGATATCCATCAGGTACTGC +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELRHIFP*ISIRYC
Trigger: GCAGTACCTGATGGATATCAATGGGAAAATATGGCG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCATTGTGCTGGGCCTTATaGGAGAAGGCTGTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPLCWAL*EKAVLS
Trigger: TGAGAGAACAGCCTTCTCCAATAAGGCCCAGCACAA...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACAACCACCGGAAAACTTaGACACAGCGCTCCACGTCC +
Preference number: 5 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYNHRKT*TQRSTS
Trigger: GGACGTGGAGCGCTGTGTCAAAGTTTTCCGGTGGTT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATCGAGCGCACTGCTaGAAGGTGCTGATGATACCT +
Preference number: 5 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPNRAHC*KVLMIP
Trigger: AGGTATCATCAGCACCTTCAAGCAGTGCGCTCGATT...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGTCTTCAGGGGCATTTaGGGTGAGTCTTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYVFRGI*GESSAS
Trigger: GCTGGCTGAAGACTCACCCAAAATGCCCCTGAAGAC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGAAGGACATCTCACTGTaGGACCTTGTGTTATTCAAC +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRKDISL*DLVLFN
Trigger: GTTGAATAACACAAGGTCCAACAGTGAGATGTCCTT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAGGGGGCGTGTTATCCTaGAAGCACATGGTAGAAACA +
Preference number: 5 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPGGVLS*KHMVET
Trigger: TGTTTCTACCATGTGCTTCAAGGATAACACGCCCCC...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCATGGATGGCCCTGCTaGGAGAAGCTCTGCACGAAT +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEHGWPC*EKLCTN
Trigger: ATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCCTGGGAAACACCCATaGGCATGGATGGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFPGKHP*AWMALL
Trigger: AAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCACTCAAGCACAGCTTaGGCCGTTGCATCACGGACA +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEHSSTA*AVASRT
Trigger: TGTCCGTGATGCAACGGCCAAAGCTGTGCTTGAGTG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAGGCTTCAAAATTTGGTaGTGTCCACAGAGGAGGATG +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTGFKIW*CPQRRM
Trigger: CATCCTCCTCTGTGGACACAACCAAATTTTGAAGCC...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCTCCTGCCCAGCATCTaGGTTAGCTGCTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFLLPSI*VSCSRS
Trigger: AGACCTGGAGCAGCTAACCAAGATGCTGGGCAGGAG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAACTTGGTACTGGCAGTaGGAGAGGATCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPTWYWQ*ERISGF
Trigger: GAATCCACTGATCCTCTCCAACTGCCAGTACCAAGT...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCAGGGTCAGCCTGGGCTaGCCCTGTAGGAACCGGCTG +
Preference number: 5 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCRVSLG*PCRNRL
Trigger: CAGCCGGTTCCTACAGGGCAAGCCCAGGCTGACCCT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGAGCTCCTCTTTGTATaGCACATCAATTTCCCGAAA +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRELLFV*HINFPK
Trigger: TTTCGGGAAATTGATGTGCAATACAAAGAGGAGCTC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS TCA 90 bp TGGGATGGCAGCCGCCTTCTATTTAAGTTCCAGATGTCAAGAAACTaGCTCTGGTGCTCGAGGATCAGCTCCAGCTGTCCAACCACAATG +
Preference number: 5 (lower is better)
Translates to: WDGSRLLFKFQMSRN*LWCSRISSSCPTTM
Trigger: CATTGTGGTTGGACAGCTGGAGCTGATCCTCGAGCACCAGAGTCAGTTTCTTGACATCTGGAACTTAAATAGAAGGCGGCTGCCATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp GAAGAGAGAAGGGAGCTAGGTCTTCTTCAACAACTTCGCCAATGGTaGCTGACTGCCTACCTGGGCTTTGGTCTGAAGTGTGAAGAGTCG +
Preference number: 5 (lower is better)
Translates to: EERRELGLLQQLRQW*LTAYLGFGLKCEES
Trigger: CGACTCTTCACACTTCAGACCAAAGCCCAGGTAGGCAGTCAGTCACCATTGGCGAAGTTGTTGAAGAAGACCTAGCTCCCTTCTCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp AACCTGCTCGAGATTTCTGCAGCCAGCACTTGTCTTCTGGTGTACTaGGTCCTCCAGGCAGCTGATGAAGAGCAGGTACAGTTCCGTTTT +
Preference number: 5 (lower is better)
Translates to: NLLEISAASTCLLVY*VLQAADEEQVQFRF
Trigger: AAAACGGAACTGTACCTGCTCTTCATCAGCTGCCTGGAGGACTCAGTACACCAGAAGACAAGTGCTGGCTGCAGAAATCTCGAGCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CGAGGATGCGGTTCTTGGCTTGCTGGAAAAACCCAGTGGACCTCATaGAGATTATGTCATCATACTGATGCCAGTCTCCATTGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: RGCGSWLAGKTQWTS*RLCHHTDASLHCPR
Trigger: CCTTGGGCAATGGAGACTGGCATCAGTATGATGACATAATCTGCATGAGGTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp ACGGCAGGTGACTTTGGGGAAGAGATCAAGAAACTTGAACAGGGGTaGACGTGCGTTCAGTTTAGAAGACCTCTTTGGCTGTACCGAGAG +
Preference number: 5 (lower is better)
Translates to: TAGDFGEEIKKLEQG*TCVQFRRPLWLYRE
Trigger: CTCTCGGTACAGCCAAAGAGGTCTTCTAAACTGAACGCACGTGCACCCCTGTTCAAGTTTCTTGATCTCTTCCCCAAAGTCACCTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GATGGAACCGTTTTAAATACTGGTAAGGTCGTTGGAAAGCTTCACTaGAGAACTCCACTGGGTCCATGGCAGGGTCTGTGTGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: DGTVLNTGKVVGKLH*RTPLGPWQGLCGSS
Trigger: AGAGGAGCCACACAGACCCTGCCATGGACCCAGTGGAGTTCTGCAGTGAAGCTTTCCAACGACCTTACCAGTATTTAAAACGGTTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GGGTTGCAGGCAGCAATGATATGCAGGCCAGAGTCCTCATGTAGGTaGTCACCATCCACTGTCCGATCACACAAGATCTCTTTGATACAG +
Preference number: 5 (lower is better)
Translates to: GLQAAMICRPESSCR*SPSTVRSHKISLIQ
Trigger: CTGTATCAAAGAGATCTTGTGTGATCGGACAGTGGATGGTGAGCACCTACATGAGGACTCTGGCCTGCATATCATTGCTGCCTGCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp ATTCTCCCTCTTCCTCATGAACATCTGCGAGGCAGAGAGCACATCTaGAATCACACAAGTCTCACTGGGATTCACAGAGACGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: ILPLPHEHLRGREHI*NHTSLTGIHRDGVH
Trigger: GTGGACTCCGTCTCTGTGAATCCCAGTGAGACTTGTGTGATTGCAGATGTGCTCTCTGCCTCGCAGATGTTCATGAGGAAGAGGGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CCTTTGGTTGACAATTCTGCATTAAAATTTAACACCCCGTGGCTCTaGACCCTGAGCAGGCTGCTCAGGATGAGGTGGACCACATGGATG +
Preference number: 5 (lower is better)
Translates to: PLVDNSALKFNTPWL*TLSRLLRMRWTTWM
Trigger: CATCCATGTGGTCCACCTCATCCTGAGCAGCCTGCTCAGGGTGCAGAGCCACGGGGTGTTAAATTTTAATGCAGAATTGTCAACCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp AGGACAGGCACCGTTTCCTTGCCGTTCTTCTGTTCCACGATGTGCTaGAGGTACTCCACTGTGATTTTCCTCCTGCAGCTCCAAATCTTT +
Preference number: 5 (lower is better)
Translates to: RTGTVSLPFFCSTMC*RYSTVIFLLQLQIF
Trigger: AAAGATTTGGAGCTGCAGGAGGAAAATCACAGTGGAGTACCTGCAGCACATCGTGGAACAGAAGAACGGCAAGGAAACGGTGCCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GTGCCCAGGAGTCTTTGGTGCTGTGTGCTGAGCTCCTCTTTGTATTaGACATCAATTTCCCGAAATAGCTCTTTGTTCAGTCGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: VPRSLWCCVLSSSLY*TSISRNSSLFSRSR
Trigger: GCGGCTGCGACTGAACAAAGAGCTATTTCGGGAAATTGATGTGCAATACAAAGAGGAGCTCAGCACACAGCACCAAAGACTCCTGGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CCA 90 bp TCAGAGCATTCCCAATGTCTAGGGTCTTGCACTCAAGCACAGCTTTaGCCGTTGCATCACGGACAGCCTTGTATTCATTACCGTGGACGA +
Preference number: 5 (lower is better)
Translates to: SEHSQCLGSCTQAQL*PLHHGQPCIHYRGR
Trigger: TCGTCCACGGTAATGAATACAAGGCTGTCCGTGATGCAACGGCCAAAGCTGTGCTTGAGTGCAAGACCCTAGACATTGGGAATGCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CTGCATCCTTTGGTTGACAATTCTGCATTAAAATTTAACACCCCGTaGCTCTGCACCCTGAGCAGGCTGCTCAGGATGAGGTGGACCACA +
Preference number: 5 (lower is better)
Translates to: LHPLVDNSALKFNTP*LCTLSRLLRMRWTT
Trigger: TGTGGTCCACCTCATCCTGAGCAGCCTGCTCAGGGTGCAGAGCCACGGGGTGTTAAATTTTAATGCAGAATTGTCAACCAAAGGATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp AGATCAAACTCTTGTGAGGTTTCCCCACCTTGCTGCACTTGGTACTaGCAGTTGGAGAGGATCAGTGGATTCAGATCCCGTTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: RSNSCEVSPPCCTWY*QLERISGFRSRSTS
Trigger: TGAGGTGGAACGGGATCTGAATCCACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGGGGAAACCTCACAAGAGTTTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CCA 90 bp AAGGCGTCTAGGCCTGCCTCATTCAGGAATGTGCCCAGGAGTCTTTaGTGCTGTGTGCTGAGCTCCTCTTTGTATTGCACATCAATTTCC +
Preference number: 5 (lower is better)
Translates to: KASRPASFRNVPRSL*CCVLSSSLYCTSIS
Trigger: GGAAATTGATGTGCAATACAAAGAGGAGCTCAGCACACAGCACCAAAGACTCCTGGGCACATTCCTGAATGAGGCAGGCCTAGACGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGTCTATGATTTTCTCATaGGTTCCACACAGTTCGAAG +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLSMIFS*VPHSSK
Trigger: CTTCGAACTGTGTGGAACCAATGAGAAAATCATAGA...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACATATCTCTTCTCTTGCTaGAGGAACAGCAGATCATCC +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTYLFSC*RNSRSS
Trigger: GGATGATCTGCTGTTCCTCAAGCAAGAGAAGAGATA...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGCATGTACACGAGGGATaGCATCATAATAACCTGAAG +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELHVHEG*HHNNLK
Trigger: CTTCAGGTTATTATGATGCAATCCCTCGTGTACATG...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGGCTTTGCTTTTAGTTTaGTATGCAGTGTGTTCACGT +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRALLLV*YAVCSR
Trigger: ACGTGAACACACTGCATACAAAACTAAAAGCAAAGC...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACGCCATATTTTCCCATaGATATCCATCAGGTACTGC +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSRHIFP*ISIRYC
Trigger: GCAGTACCTGATGGATATCAATGGGAAAATATGGCG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGTCTTCAGGGGCATTTaGGGTGAGTCTTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFVFRGI*GESSAS
Trigger: GCTGGCTGAAGACTCACCCAAAATGCCCCTGAAGAC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACAGTCACAGCTTCTaGGGTCAGAGGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPNSHSF*GQRPFS
Trigger: TGAAAAAGGCCTCTGACCCAAGAAGCTGTGACTGTT...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGTGGTTCTCTTCTTGCTaGTTTAGAAGAACATGGAGA +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLWFSSC*FRRTWR
Trigger: TCTCCATGTTCTTCTAAACAAGCAAGAAGAGAACCA...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGAAGGACATCTCACTGTaGGACCTTGTGTTATTCAAC +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELKDISL*DLVLFN
Trigger: GTTGAATAACACAAGGTCCAACAGTGAGATGTCCTT...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGACATTAATTCCTCCCTaGAAGACACTTTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRTLIPP*KTLSWS
Trigger: TGACCATGAAAGTGTCTTCAAGGGAGGAATTAATGT...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACAACCTGCTGAACTTCTaGCTGGCCTTGTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYNLLNF*LALSLQ
Trigger: CTGCAAGGACAAGGCCAGCAAGAAGTTCAGCAGGTT...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGTCATGGAAGCTGTACTaGAGAAGCAGTTTTAACAGC +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELSWKLY*RSSFNS
Trigger: GCTGTTAAAACTGCTTCTCAAGTACAGCTTCCATGA...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGTCAGGGCCTGGGGATaGTGGGTGGCTCCCACAAGC +
Preference number: 5 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHVRAWG*WVAPTS
Trigger: GCTTGTGGGAGCCACCCACAATCCCCAGGCCCTGAC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGATAGCTGGCAAGTTTTaGTCAAGATGCTTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLIAGKF*SRCFSS
Trigger: TGAACTGAAGCATCTTGACAAAAACTTGCCAGCTAT...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGAGCTCCTCTTTGTATaGCACATCAATTTCCCGAAA +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELELLFV*HINFPK
Trigger: TTTCGGGAAATTGATGTGCAATACAAAGAGGAGCTC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS TCA 90 bp AGCCTGGTGCAGGGTGTGATATTCTTTGATCTGCCCAACACGCTCTaGGATCCAACCTTTTTGGTCCTGGGGGTTCATAGTGCACATGAA +
Preference number: 5 (lower is better)
Translates to: SLVQGVIFFDLPNTL*DPTFLVLGVHSAHE
Trigger: TTCATGTGCACTATGAACCCCCAGGACCAAAAAGGTTGGATCTCAGAGCGTGTTGGGCAGATCAAAGAATATCACACCCTGCACCAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp TCGCCAATGGTGACTGACTGCCTACCTGGGCTTTGGTCTGAAGTGTaGAGAGTCGGAGTAGCAAAATCCCTGGCCATTAAGATCATGAAG +
Preference number: 5 (lower is better)
Translates to: SPMVTDCLPGLWSEV*RVGVAKSLAIKIMK
Trigger: CTTCATGATCTTAATGGCCAGGGATTTTGCTACTCCGACTCTTCACACTTCAGACCAAAGCCCAGGTAGGCAGTCAGTCACCATTGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp TGGAGAAACTTGTCGAGCTCCTTTAAGAGCATATCACTATGGTCATaGAACCACCGGAAAACTTTGACACAGCGCTCCACGTCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: WRNLSSSFKSISLWS*NHRKTLTQRSTSRR
Trigger: CCTCCGGGACGTGGAGCGCTGTGTCAAAGTTTTCCGGTGGTTTCATGACCATAGTGATATGCTCTTAAAGGAGCTCGACAAGTTTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp CTGGCAAGTCAGTTAAGCAGTAGGGGCACATCATTTGCCCAGGGATaGGCCAGGTCTGAATGCAACGTAGACAATACACATGATCACAGG +
Preference number: 5 (lower is better)
Translates to: LASQLSSRGTSFAQG*ARSECNVDNTHDHR
Trigger: CCTGTGATCATGTGTATTGTCTACGTTGCATTCAGACCTGGCTCATCCCTGGGCAAATGATGTGCCCCTACTGCTTAACTGACTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp CAGCATCCAGATCCAAGTCAGAACAGCAGTAATCTTTTGGTAGCTTaGTCTCACCATTGGTCTCCAGTGACCGCCTCAGTGCATTCCACG +
Preference number: 5 (lower is better)
Translates to: QHPDPSQNSSNLLVA*SHHWSPVTASVHST
Trigger: CGTGGAATGCACTGAGGCGGTCACTGGAGACCAATGGTGAGATCAAGCTACCAAAAGATTACTGCTGTTCTGACTTGGATCTGGATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GGAGTCCACCAGTCTCTGTACGATCTGCTGGATGTAGAGCTTTTCTaGAGAGTCATTCAGCTGCCCAAAGTCCCATACCAAAGGAATGAG +
Preference number: 5 (lower is better)
Translates to: GVHQSLYDLLDVELF*RVIQLPKVPYQRNE
Trigger: CTCATTCCTTTGGTATGGGACTTTGGGCAGCTGAATGACTCTGCAGAAAAGCTCTACATCCAGCAGATCGTACAGAGACTGGTGGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp AACCAGGAGCGGACATCCTTAAGGAACGAATATTCAGTGTCATATTaGTGTAGTGACAGCACCACAGGTTTCGAGGCCAGTCCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: NQERTSLRNEYSVSY*CSDSTTGFEASPLS
Trigger: GCTGAGAGGACTGGCCTCGAAACCTGTGGTGCTGTCACTACAGCAATATGACACTGAATATTCGTTCCTTAAGGATGTCCGCTCCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TCTGCCAATTCCTTTGACTGGCTTGTCTCTATCTCCATCTCCTCCTaGTCAGGTTTGTCCTCTGGCTTGAACAACTGGCTGATGGTGACA +
Preference number: 5 (lower is better)
Translates to: SANSFDWLVSISISS*SGLSSGLNNWLMVT
Trigger: TGTCACCATCAGCCAGTTGTTCAAGCCAGAGGACAAACCTGAGCAGGAGGAGATGGAGATAGAGACAAGCCAGTCAAAGGAATTGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TCTTGTCCAGATGTCTCCCCCTTAGATTCAGGTAATGGAGCCTTCTaGGAAGCATCAGTCATCTTAGGGTGGCCTTTGAACGCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: SCPDVSPLDSGNGAF*EASVILGWPLNAER
Trigger: CCTTTCTGCGTTCAAAGGCCACCCTAAGATGACTGATGCTTCCCAGAAGGCTCCATTACCTGAATCTAAGGGGGAGACATCTGGACAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CTGTCAGCCTTGCTTTCACAGGCACTGGTAGCTTGTACGAGGTCCTaGACAGTGCATTTGCCTTTAATGAAGGATAGCATCATGAGGGCA +
Preference number: 5 (lower is better)
Translates to: LSALLSQALVACTRS*TVHLPLMKDSIMRA
Trigger: TGCCCTCATGATGCTATCCTTCATTAAAGGCAAATGCACTGTCCAGGACCTCGTACAAGCTACCAGTGCCTGTGAAAGCAAGGCTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CCAATGAAGACATCTGCAGGACTGTACTTGTGTCTGGCAATGAACTaGTCTGCTTTTACATCTGCGAACTCGTGTGCCCACTGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: PMKTSAGLYLCLAMN*SAFTSANSCAHCCS
Trigger: GCTACAGCAGTGGGCACACGAGTTCGCAGATGTAAAAGCAGACCAGTTCATTGCCAGACACAAGTACAGTCCTGCAGATGTCTTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GGCCTTGTCCTTGCAGTCACAGAGTGTGGTCATTACAGCCACAAATaGCCTGCAGGTCTTGAGGTTAGAGTCCTCTTCAAGACATTTGTC +
Preference number: 5 (lower is better)
Translates to: GLVLAVTECGHYSHK*PAGLEVRVLFKTFV
Trigger: GACAAATGTCTTGAAGAGGACTCTAACCTCAAGACCTGCAGGCCATTTGTGGCTGTAATGACCACACTCTGTGACTGCAAGGACAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp AATATCTCAGGCAGGAATTTCACCAACCTTAGTTCTGCTTCCTTCTaGAGGAAGTGCCAGAGGACAGGCACCGTTTCCTTGCCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: NISGRNFTNLSSASF*RKCQRTGTVSLPFF
Trigger: GAAGAACGGCAAGGAAACGGTGCCTGTCCTCTGGCACTTCCTCCAGAAGGAAGCAGAACTAAGGTTGGTGAAATTCCTGCCTGAGATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TTCTCTAGATCAAACTCTTGTGAGGTTTCCCCACCTTGCTGCACTTaGTACTGGCAGTTGGAGAGGATCAGTGGATTCAGATCCCGTTCC +
Preference number: 5 (lower is better)
Translates to: FSRSNSCEVSPPCCT*YWQLERISGFRSRS
Trigger: GGAACGGGATCTGAATCCACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGGGGAAACCTCACAAGAGTTTGATCTAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACTCCTTTTTACTCATTaGGGTGGTCCAGGAGGCATT +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKLLFTH*GGPGGI
Trigger: AATGCCTCCTGGACCACCCAAATGAGTAAAAAGGAG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCGAAGCCATCCTCCATaGGCATGTTCTCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFRSHPP*ACSLCP
Trigger: TGGACACAGAGAACATGCCAATGGAGGATGGCTTCG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCAGTAAAACTGCAGGAATaGAGTCATGAAACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSVKLQE*SHETLQ
Trigger: CTGCAGAGTTTCATGACTCAATTCCTGCAGTTTTAC...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAAAATTTCTGCAAGTCTaGACAGGAGAGCCCCTCAAG +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKKFLQV*TGEPLK
Trigger: CTTGAGGGGCTCTCCTGTCAAGACTTGCAGAAATTT...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCACCTTCCTCCGTGATGTaGTCTATGATTTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSPSSVM*SMIFSL
Trigger: CAATGAGAAAATCATAGACAACATCACGGAGGAAGG...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCAGTATCTGTCAGCCTaGCTTTCACAGGCACTGGTA +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEQYLSA*LSQALV
Trigger: TACCAGTGCCTGTGAAAGCAAGGCTGACAGATACTG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGTCACCACAAAGTTCTaGAAGCCCCGAAGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYVTTKF*KPRSVS
Trigger: AGACACACTTCGGGGCTTCAAGAACTTTGTGGTGAC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGAATCGAGCGCACTGCTaGAAGGTGCTGATGATACCT +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGENRAHC*KVLMIP
Trigger: AGGTATCATCAGCACCTTCAAGCAGTGCGCTCGATT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CAGCCCATACTGGGAGCTGTGGAGGGAGGTGAGGAAGACCTTCCTTTCCAGCTGGTTTTGTTGATTTCATaGATGGCAGTATACTTGGCA +
Preference number: 5 (lower is better)
Translates to: QPILGAVEGGEEDLPFQLVLLIS*MAVYLA
Trigger: TGCCAAGTATACTGCCATCAATGAAATCAACAAAAC...CAGCTGGAAAGGAAGGTCTTCCTCACCTCCCTCCACAGCTCCCAGTATGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGTTCCCTGTGTTTTGTaGATTTCATTGATGGCAGTA +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELVPCVL*ISLMAV
Trigger: TACTGCCATCAATGAAATCAACAAAACACAGGGAAC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CGCACTCTAGTTCCAGCTCACCAGTGCGCTCATCCTTCTCCACTCTCTGTCCGGTTTGTTCCCTGTGTTTaGTTGATTTCATTGATGGCA +
Preference number: 5 (lower is better)
Translates to: RTLVPAHQCAHPSPLSVRFVPCV*LISLMA
Trigger: TGCCATCAATGAAATCAACAAAACACAGGGAACAAA...CCGGACAGAGAGTGGAGAAGGATGAGCGCACTGGTGAGCTGGAACTAGAGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGTAGGGGCACATCATTaGCCCAGGGATGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: WVVHEALQLLSAPWISLGVGAHH*PRDEPG
Trigger: ACCTGGCTCATCCCTGGGCAAATGATGTGCCCCTAC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGTTCACTGCCTCCAATaGCTTTGCTTCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEVHCLQ*LCFWME
Trigger: CTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAAC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATGTGCCATTTTGTTCTaGATGTCCATGAAGAGATGC +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSCAILF*MSMKRC
Trigger: GCATCTCTTCATGGACATCAAGAACAAAATGGCACA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAGAGCTCTGTGCCATTTaGTTCTTGATGTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPELCAI*FLMSMK
Trigger: CTTCATGGACATCAAGAACAAAATGGCACAGAGCTC...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAGTGCTGAGCTCCTCTTaGTATTGCACATCAATTTCC +
Preference number: 5 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPVLSSS*YCTSIS
Trigger: GGAAATTGATGTGCAATACAAAGAGGAGCTCAGCAC...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS TCA 90 bp GTTTTCACAGCTGCTGCAAAGTTTCTGCCCTCTCCTGGCTTCCTCTaGTCTTCTGGCTGGGTGTTGCCACCTTCATTACTTTTCCTAACA +
Preference number: 5 (lower is better)
Translates to: VFTAAAKFLPSPGFL*SSGWVLPPSLLFLT
Trigger: TGTTAGGAAAAGTAATGAAGGTGGCAACACCCAGCCAGAAGATCAGAGGAAGCCAGGAGAGGGCAGAAACTTTGCAGCAGCTGTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp TTTGGCTGTACCGAGAGCCCTTGTGGGATTTCAACAAGGTATAAATaGCCCGGGCTCCGACGCCATATTTTCCCATTGATATCCATCAGG +
Preference number: 5 (lower is better)
Translates to: FGCTESPCGISTRYK*PGLRRHIFPLISIR
Trigger: CCTGATGGATATCAATGGGAAAATATGGCGTCGGAGCCCGGGTCATTTATACCTTGTTGAAATCCCACAAGGGCTCTCGGTACAGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp CAAGGTCCACGTACTTCTGACCCCCAAGGTAGACATAGTACTGGTTaGGAGCATCATACAGGCTCTCATAGAGATTCTGCAGGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: QGPRTSDPQGRHSTG*EHHTGSHRDSAGSA
Trigger: TGCTGAACCTGCAGAATCTCTATGAGAGCCTGTATGATGCTCTCAACCAGTACTATGTCTACCTTGGGGGTCAGAAGTACGTGGACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp CCTGCTTCTTCCCTTTCAACAGTTCCTTTCTTGTACTATCGAGGATaGGGTTCTTGGCTTGCTGGAAAAACCCAGTGGACCTCATGCAGA +
Preference number: 5 (lower is better)
Translates to: PASSLSTVPFLYYRG*GSWLAGKTQWTSCR
Trigger: TCTGCATGAGGTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCGATAGTACAAGAAAGGAACTGTTGAAAGGGAAGAAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TCTGTTGTGTTGGCTTCATCAAAGAACAAGATGGTATCCAGCTTGTaGTGGGCCTTATTGGAGAAGGCTGTTCTCTCAGCCTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: SVVLASSKNKMVSSL*WALLEKAVLSASLT
Trigger: GGTCAAGGAGGCTGAGAGAACAGCCTTCTCCAATAAGGCCCAGCACAAGCTGGATACCATCTTGTTCTTTGATGAAGCCAACACAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GTGACATCTGAAGCCATAATTGTTGATCTGCGGAGGTCATCAATATaGACAGACCGCCATAGCCCTCCATGGAACCCCACGTATGATGTA +
Preference number: 5 (lower is better)
Translates to: VTSEAIIVDLRRSSI*TDRHSPPWNPTYDV
Trigger: TACATCATACGTGGGGTTCCATGGAGGGCTATGGCGGTCTGTGCATATTGATGACCTCCGCAGATCAACAATTATGGCTTCAGATGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TGGATCTTCTCTAGATCAAACTCTTGTGAGGTTTCCCCACCTTGCTaGACTTGGTACTGGCAGTTGGAGAGGATCAGTGGATTCAGATCC +
Preference number: 5 (lower is better)
Translates to: WIFSRSNSCEVSPPC*TWYWQLERISGFRS
Trigger: GGATCTGAATCCACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGGGGAAACCTCACAAGAGTTTGATCTAGAGAAGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS GCA 90 bp CGTTGGATCTTCTCTAGATCAAACTCTTGTGAGGTTTCCCCACCTTaGTGCACTTGGTACTGGCAGTTGGAGAGGATCAGTGGATTCAGA +
Preference number: 5 (lower is better)
Translates to: RWIFSRSNSCEVSPP*CTWYWQLERISGFR
Trigger: TCTGAATCCACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGGGGAAACCTCACAAGAGTTTGATCTAGAGAAGATCCAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CCA 90 bp GTATTCAGTGACTCTGCTGTCTCTTGCCAGAAGTCCTGGAAGATATaGCTGTCTTTCAGGGAGTCTAGCTTGCTTGCCATTTCTCGGATG +
Preference number: 5 (lower is better)
Translates to: VFSDSAVSCQKSWKI*LSFRESSLLAISRM
Trigger: CATCCGAGAAATGGCAAGCAAGCTAGACTCCCTGAAAGACAGCCATATCTTCCAGGACTTCTGGCAAGAGACAGCAGAGTCACTGAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TGTACAGGTATTCCAAGACCTCTGGAAGCGAAACCTTCAACTCTCTaGGGTCCTTATCCAGAGTATTCAGTGACTCTGCTGTCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: CTGIPRPLEAKPSTL*GPYPEYSVTLLSLA
Trigger: GGCAAGAGACAGCAGAGTCACTGAATACTCTGGATAAGGACCCCAGAGAGTTGAAGGTTTCGCTTCCAGAGGTCTTGGAATACCTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GTTGTGTTGGCTTCATCAAAGAACAAGATGGTATCCAGCTTGTGCTaGGCCTTATTGGAGAAGGCTGTTCTCTCAGCCTCCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: VVLASSKNKMVSSLC*ALLEKAVLSASLTL
Trigger: CAAGGTCAAGGAGGCTGAGAGAACAGCCTTCTCCAATAAGGCCCAGCACAAGCTGGATACCATCTTGTTCTTTGATGAAGCCAACACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp ATCTCCATCTCCTCCTGCTCAGGTTTGTCCTCTGGCTTGAACAACTaGCTGATGGTGACATTCTGCAGTTTGGTGACATCTGAAGCCATA +
Preference number: 5 (lower is better)
Translates to: ISISSCSGLSSGLNN*LMVTFCSLVTSEAI
Trigger: TATGGCTTCAGATGTCACCAAACTGCAGAATGTCACCATCAGCCAGTTGTTCAAGCCAGAGGACAAACCTGAGCAGGAGGAGATGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTGGTTAGCTGTGATGTaGCAGACAGTTTCATGGAGG +
Preference number: 5 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYWLAVM*QTVSWR
Trigger: CCTCCATGAAACTGTCTGCAACATCACAGCTAACCA...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTGAGCTGCCCTCTGATGGATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATCTCGTCACGTAGCTTaGCTTTTAGTTTTGTATGCA +
Preference number: 5 (lower is better)
Translates to: LSCPLMDHRSSKAKLASSSRHVA*LLVLYA
Trigger: TGCATACAAAACTAAAAGCAAAGCTACGTGACGAGA...TGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATCCATCAGAGGGCAGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTTGCTTCCGATATGGGTaGCAGGCAGCAATGATATGC +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFCFRYG*QAAMIC
Trigger: GCATATCATTGCTGCCTGCAACCCATATCGGAAGCA...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGGTTTTGTTGATTTCATaGATGGCAGTATACTTGGCA +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELVLLIS*MAVYLA
Trigger: TGCCAAGTATACTGCCATCAATGAAATCAACAAAAC...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCCTAGTTCAAAGCCAGAAGGGGCCTTACAGCAAGACGTGTGGGGCTGAGCTGTTTGTTCCCTGTGTTTaGTTGATTTCATTGATGGCA +
Preference number: 5 (lower is better)
Translates to: CLVQSQKGPYSKTCGAELFVPCV*LISLMA
Trigger: TGCCATCAATGAAATCAACAAAACACAGGGAACAAA...CAGCTCAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGTGACATTCTGCAGTTaGGTGACATCTGAAGCCATA +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKVTFCS*VTSEAI
Trigger: TATGGCTTCAGATGTCACCAAACTGCAGAATGTCAC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACAACATTAATTCCTCCCTaGAAGACACTTTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTTLIPP*KTLSWS
Trigger: TGACCATGAAAGTGTCTTCAAGGGAGGAATTAATGT...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGTAGGGGCACATCATTaGCCCAGGGATGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCVGAHH*PRDEPG
Trigger: ACCTGGCTCATCCCTGGGCAAATGATGTGCCCCTAC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAACAGTTGGTGAGAACTaGTCTGGCAAGTCAGTTAAG +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKTVGEN*SGKSVK
Trigger: CTTAACTGACTTGCCAGACAAGTTCTCACCAACTGT...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGCACAGCTTTGGCCGTaGCATCACGGACAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCAQLWP*HHGQPC
Trigger: ACAAGGCTGTCCGTGATGCAACGGCCAAAGCTGTGC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGCAGTGCTGGGGAGAGAACCCAGGGCTTTGCTATGGTAGGCAAGTACTCCACATTGTTCCTGCATCCTTaGGTTGACAATTCTGCATTA +
Preference number: 5 (lower is better)
Translates to: CSAGERTQGFAMVGKYSTLFLHP*VDNSAL
Trigger: TAATGCAGAATTGTCAACCAAAGGATGCAGGAACAA...TGTGGAGTACTTGCCTACCATAGCAAAGCCCTGGGTTCTCTCCCCAGCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGTTTGACCAGATCCCTTaGCAGAGCCAATATCTCAGG +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEFDQIP*QSQYLR
Trigger: CCTGAGATATTGGCTCTGCAAAGGGATCTGGTCAAA...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAAGTGCTGAGCTCCTCTTaGTATTGCACATCAATTTCC +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKVLSSS*YCTSIS
Trigger: GGAAATTGATGTGCAATACAAAGAGGAGCTCAGCAC...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGAGGCTCCAATTGGGGTaGAAGCTGTTCGCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: FISTLDFLGLVWQFSCILRLQLG*KLFAAR
Trigger: CCGGGCTGCGAACAGCTTCAACCCCAATTGGAGCCT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS GCA 90 bp TCAGGTTTGTCCTCTGGCTTGAACAACTGGCTGATGGTGACATTCTaGAGTTTGGTGACATCTGAAGCCATAATTGTTGATCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: SGLSSGLNNWLMVTF*SLVTSEAIIVDLRR
Trigger: CCTCCGCAGATCAACAATTATGGCTTCAGATGTCACCAAACTGCAGAATGTCACCATCAGCCAGTTGTTCAAGCCAGAGGACAAACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GATCTTGCTTTCCTTAATGAATTTGTTCACTGCCTCCAATTGCTTTaGTTCTGGATGGAGGCTGCCATTGGGGGAACGGTACAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: DLAFLNEFVHCLQLL*FWMEAAIGGTVQSS
Trigger: GCTGCTTTGTACCGTTCCCCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAAATTCATTAAGGAAAGCAAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CAGATCCATGGCTTTCCTTCACTGTCTTCAGCCACTCCAAATTTCTaGCAGAATCTTTCAGCTTATCGGGAAGGTGCTGGTCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: QIHGFPSLSSATPNF*QNLSAYREGAGHCP
Trigger: TGGACAATGACCAGCACCTTCCCGATAAGCTGAAAGATTCTGCCAGAAATTTGGAGTGGCTGAAGACAGTGAAGGAAAGCCATGGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GGTAGGATGCTTTCTCTTCTAAAGAGGCATGGTAGCATACCCCAATaGCCATCACCAGGGACCAGAGAACAGGATCTCTCTCAAAAGTAT +
Preference number: 5 (lower is better)
Translates to: GRMLSLLKRHGSIPQ*PSPGTREQDLSQKY
Trigger: ATACTTTTGAGAGAGATCCTGTTCTCTGGTCCCTGGTGATGGCCATTGGGGTATGCTACCATGCCTCTTTAGAAGAGAAAGCATCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp CAGCACAGAGCGGATGACAGGAGTCTGGTCAACAACATCATCAAATaGAGACAGAGACTTTGTGTGTTCACGATGTTTCTGGGAAGCATC +
Preference number: 5 (lower is better)
Translates to: QHRADDRSLVNNIIK*RQRLCVFTMFLGSI
Trigger: GATGCTTCCCAGAAACATCGTGAACACACAAAGTCTCTGTCTCCATTTGATGATGTTGTTGACCAGACTCCTGTCATCCGCTCTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGTCTTCATGTTCTGGTTaGAGATCTTCCTTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGESSCSG*RSSLAL
Trigger: CAGGGCTAAGGAAGATCTCAAACCAGAACATGAAGA...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCGGGGAGGCTCCTGCTaGAGCCTCCCTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: LYITVGNTTQTVMTLKAERGGSC*SLPSMS
Trigger: AGACATGGAAGGGAGGCTCAAGCAGGAGCCTCCCCG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp GATCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCATCTATGATTTTCTCATaGGTTCCACACAGTTCGAAG +
Preference number: 5 (lower is better)
Translates to: DHRSSKAKLASSLSPVPPSMIFS*VPHSSK
Trigger: CTTCGAACTGTGTGGAACCAATGAGAAAATCATAGA...TGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGTATCTCTTCTCTTGCTaGAGGAACAGCAGATCATCC +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEYLFSC*RNSRSS
Trigger: GGATGATCTGCTGTTCCTCAAGCAAGAGAAGAGATA...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCACGTATCTCTTCTCTaGCTTGAGGAACAGCAGATC +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFHVSLL*LEEQQI
Trigger: GATCTGCTGTTCCTCAAGCAAGAGAAGAGATACGTG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGATGTCTTCCAGGGCCTaGTGCAGCCAGGCAACAAGC +
Preference number: 5 (lower is better)
Translates to: FISTLDFLGLVWQFSCILMSSRA*CSQATS
Trigger: GCTTGTTGCCTGGCTGCACAAGGCCCTGGAAGACAT...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAACATGTACACGAGGGATaGCATCATAATAACCTGAAG +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKHVHEG*HHNNLK
Trigger: CTTCAGGTTATTATGATGCAATCCCTCGTGTACATG...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGCTGTCTGCTGGGGTTaGGGGCTTCTGCAGGCCATC +
Preference number: 5 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIAVCWG*GLLQAI
Trigger: GATGGCCTGCAGAAGCCCCAAACCCCAGCAGACAGC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTGCAGGTCTTCAGGCATaGTTGGAAGAAAAGCATTCG +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFAGLQA*LEEKHS
Trigger: CGAATGCTTTTCTTCCAACAATGCCTGAAGACCTGC...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACGTGCTGAGCTCCTCTTaGTATTGCACATCAATTTCC +
Preference number: 5 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYVLSSS*YCTSIS
Trigger: GGAAATTGATGTGCAATACAAAGAGGAGCTCAGCAC...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACTGTGCCCAGGAGTCTTaGGTGCTGTGTGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHCAQES*VLCAEL
Trigger: GAGCTCAGCACACAGCACCAAAGACTCCTGGGCACA...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS GCA 90 bp ATGTTGCCCGCGCAGTGCAGTTTTATGAAGACATGTACAAGCCGCTaGATGTTGCTGAAGACCTCTGAAAACTTCTCCACTTCTGTATTG +
Preference number: 5 (lower is better)
Translates to: MLPAQCSFMKTCTSR*MLLKTSENFSTSVL
Trigger: CAATACAGAAGTGGAGAAGTTTTCAGAGGTCTTCAGCAACATGCAGCGGCTTGTACATGTCTTCATAAAACTGCACTGCGCGGGCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GAGAGGATCTTGCTTTCCTTAATGAATTTGTTCACTGCCTCCAATTaGTTTGCTTCTGGATGGAGGCTGCCATTGGGGGAACGGTACAAA +
Preference number: 5 (lower is better)
Translates to: ERILLSLMNLFTASN*FASGWRLPLGERYK
Trigger: TTTGTACCGTTCCCCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAAATTCATTAAGGAAAGCAAGATCCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp GTTAGGATCAGAGAGGATCTTGCTTTCCTTAATGAATTTGTTCACTaGCTCCAATTGCTTTGCTTCTGGATGGAGGCTGCCATTGGGGGA +
Preference number: 5 (lower is better)
Translates to: VRIREDLAFLNEFVH*LQLLCFWMEAAIGG
Trigger: TCCCCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAAATTCATTAAGGAAAGCAAGATCCTCTCTGATCCTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TTGTACTATCGAGGATGCGGTTCTTGGCTTGCTGGAAAAACCCAGTaGACCTCATGCAGATTATGTCATCATACTGATGCCAGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: LYYRGCGSWLAGKTQ*TSCRLCHHTDASLH
Trigger: ATGGAGACTGGCATCAGTATGATGACATAATCTGCATGAGGTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCGATAGTACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TTACAGATAAGCTCAGCAGACAGGGCAGGAATCTCAAAGAACTGGTaGTTAGCTGTGATGTTGCAGACAGTTTCATGGAGGGTCAAACAC +
Preference number: 5 (lower is better)
Translates to: LQISSADRAGISKNW*LAVMLQTVSWRVKH
Trigger: GTGTTTGACCCTCCATGAAACTGTCTGCAACATCACAGCTAACCACCAGTTCTTTGAGATTCCTGCCCTGTCTGCTGAGCTTATCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TTATCCAGAGTATTCAGTGACTCTGCTGTCTCTTGCCAGAAGTCCTaGAAGATATGGCTGTCTTTCAGGGAGTCTAGCTTGCTTGCCATT +
Preference number: 5 (lower is better)
Translates to: LSRVFSDSAVSCQKS*KIWLSFRESSLLAI
Trigger: AATGGCAAGCAAGCTAGACTCCCTGAAAGACAGCCATATCTTCCAGGACTTCTGGCAAGAGACAGCAGAGTCACTGAATACTCTGGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCCGAAGCCATCCTCCATaGGCATGTTCTCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCRSHPP*ACSLCP
Trigger: TGGACACAGAGAACATGCCAATGGAGGATGGCTTCG...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGGAATCCAGGTCCTTTTaGGGTACAGTAAATTCAGCT +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGEESRSF*GTVNSA
Trigger: AGCTGAATTTACTGTACCCAAAAAGGACCTGGATTC...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCGGGGAGGCTCCTGCTaGAGCCTCCCTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLRGGSC*SLPSMS
Trigger: AGACATGGAAGGGAGGCTCAAGCAGGAGCCTCCCCG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGGAAGGTGCTGGTCATaGTCCAGGGCCCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIGRCWS*SRALQS
Trigger: ACTCTGGAGGGCCCTGGACAATGACCAGCACCTTCC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTATACTGGTAAGGTCGTaGGAAAGCTTCACTGCAGAA +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFILVRS*ESFTAE
Trigger: TTCTGCAGTGAAGCTTTCCAACGACCTTACCAGTAT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTCCAGTAAAAGCTGACTaGCAAAAGATAGACGCCTCA +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFPVKAD*QKIDAS
Trigger: TGAGGCGTCTATCTTTTGCAAGTCAGCTTTTACTGG...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGACAGCTTCTGTTGTGTaGGCTTCATCAAAGAACAAG +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGETASVV*ASSKNK
Trigger: CTTGTTCTTTGATGAAGCCAACACAACAGAAGCTGT...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGCTCTGCAGGAGTTTTaGCTGCTGTGCCACAGGGAA +
Preference number: 5 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHALQEF*LLCHRE
Trigger: TTCCCTGTGGCACAGCAGCAAAAACTCCTGCAGAGC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGTGCTTCTCTGCTGCTaGACTGAGGCTGCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHVLLCC*TEAAQN
Trigger: GTTCTGAGCAGCCTCAGTCAAGCAGCAGAGAAGCAC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TCACAGGAGCTCCAAGGCCAAGTTGGCAAGTTCATTAAGCCCTGTACCCCCAAATTGTTCCTGCATCCTTaGGTTGACAATTCTGCATTA +
Preference number: 5 (lower is better)
Translates to: SQELQGQVGKFIKPCTPKLFLHP*VDNSAL
Trigger: TAATGCAGAATTGTCAACCAAAGGATGCAGGAACAA...TTTGGGGGTACAGGGCTTAATGAACTTGCCAACTTGGCCTTGGAGCTCCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TCCCTTTCAACAGTTCCTTTCTTGTACTATCGAGGATGCGGTTCTTaGCTTGCTGGAAAAACCCAGTGGACCTCATGCAGATTATGTCAT +
Preference number: 5 (lower is better)
Translates to: SLSTVPFLYYRGCGS*LAGKTQWTSCRLCH
Trigger: ATGACATAATCTGCATGAGGTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCGATAGTACAAGAAAGGAACTGTTGAAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp AGTTTACAGATAAGCTCAGCAGACAGGGCAGGAATCTCAAAGAACTaGTGGTTAGCTGTGATGTTGCAGACAGTTTCATGGAGGGTCAAA +
Preference number: 5 (lower is better)
Translates to: SLQISSADRAGISKN*WLAVMLQTVSWRVK
Trigger: TTTGACCCTCCATGAAACTGTCTGCAACATCACAGCTAACCACCAGTTCTTTGAGATTCCTGCCCTGTCTGCTGAGCTTATCTGTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TACAGCTTACAGCTTCTGTTGTGTTGGCTTCATCAAAGAACAAGATaGTATCCAGCTTGTGCTGGGCCTTATTGGAGAAGGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: YSLQLLLCWLHQRTR*YPACAGPYWRRLFS
Trigger: AGAGAACAGCCTTCTCCAATAAGGCCCAGCACAAGCTGGATACCATCTTGTTCTTTGATGAAGCCAACACAACAGAAGCTGTAAGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GGGACCAGAGAACAGGATCTCTCTCAAAAGTATGTGTGCTGTCACTaGATTCATGGAGAAACTTGTCGAGCTCCTTTAAGAGCATATCAC +
Preference number: 5 (lower is better)
Translates to: GTREQDLSQKYVCCH*IHGETCRAPLRAYH
Trigger: GTGATATGCTCTTAAAGGAGCTCGACAAGTTTCTCCATGAATCCAGTGACAGCACACATACTTTTGAGAGAGATCCTGTTCTCTGGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp GGGCCATCTGCAGAAACATTAATTCCTCCCTTGAAGACACTTTCATaGTCAAGAGCAGGAAGTCCTTCAAGTAGCTCTGCAGGAGTTTTT +
Preference number: 5 (lower is better)
Translates to: GPSAETLIPPLKTLS*SRAGSPSSSSAGVF
Trigger: AAAAACTCCTGCAGAGCTACTTGAAGGACTTCCTGCTCTTGACCATGAAAGTGTCTTCAAGGGAGGAATTAATGTTTCTGCAGATGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTTCTCCACTTCTGTATaGCTGTTGTGGTCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYFSTSV*LLWSFF
Trigger: AAAGAAAGACCACAACAGCAATACAGAAGTGGAGAA...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTTGAATCCAGTCTGTGCCCACACTTTCCTTCACACAAAAGCCACAGCCCATACTCTCGTCACGTAGCTTaGCTTTTAGTTTTGTATGCA +
Preference number: 5 (lower is better)
Translates to: LESSLCPHFPSHKSHSPYSRHVA*LLVLYA
Trigger: TGCATACAAAACTAAAAGCAAAGCTACGTGACGAGA...GTATGGGCTGTGGCTTTTGTGTGAAGGAAAGTGTGGGCACAGACTGGATTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTACAGCTTCTGTTGTGTaGGCTTCATCAAAGAACAAG +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFTASVV*ASSKNK
Trigger: CTTGTTCTTTGATGAAGCCAACACAACAGAAGCTGT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTAGCTTACAGCTTCTGTaGTGTTGGCTTCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFSLQLL*CWLHQR
Trigger: TCTTTGATGAAGCCAACACAACAGAAGCTGTAAGCT...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCCATCCCACGCTGGCTaGAGAGTTTCCTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEPSHAG*RVSSPG
Trigger: ACCTGGTGAGGAAACTCTCAAGCCAGCGTGGGATGG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCCATCCCACGCTGGCTaGAGAGTTTCCTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIPSHAG*RVSSPG
Trigger: ACCTGGTGAGGAAACTCTCAAGCCAGCGTGGGATGG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACTGGAAAGTGCTTTGTTTGTCTGTCCCTATTCCCACTTGCAGTGCTGGGGAGCTTTCCTTAATGAATTaGTTCACTGCCTCCAATTGC +
Preference number: 5 (lower is better)
Translates to: NWKVLCLSVPIPTCSAGELSLMN*FTASNC
Trigger: GCAATTGGAGGCAGTGAACAAATTCATTAAGGAAAG...CTCCCCAGCACTGCAAGTGGGAATAGGGACAGACAAACAAAGCACTTTCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGGCTTCAAAATTTGGTaGTGTCCACAGAGGAGGATG +
Preference number: 5 (lower is better)
Translates to: WVVHEALQLLSAPWISLGGFKIW*CPQRRM
Trigger: CATCCTCCTCTGTGGACACAACCAAATTTTGAAGCC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGGTCTTCAGGCATTGTaGGAAGAAAAGCATTCGCCA +
Preference number: 5 (lower is better)
Translates to: WVVHEALQLLSAPWISLGGLQAL*EEKHSP
Trigger: TGGCGAATGCTTTTCTTCCAACAATGCCTGAAGACC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCACTTGGTACTGGCAGTaGGAGAGGATCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCTWYWQ*ERISGF
Trigger: GAATCCACTGATCCTCTCCAACTGCCAGTACCAAGT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCCCACCTTGCTGCACTaGGTACTGGCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEPTLLH*VLAVGE
Trigger: CTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGGG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGAGGCTCCAATTGGGGTaGAAGCTGTTCGCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQRLQLG*KLFAAR
Trigger: CCGGGCTGCGAACAGCTTCAACCCCAATTGGAGCCT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS TCA 90 bp CATGTAGGTGCTCACCATCCACTGTCCGATCACACAAGATCTCTTTaGTACAGCTTACAGCTTCTGTTGTGTTGGCTTCATCAAAGAACA +
Preference number: 5 (lower is better)
Translates to: HVGAHHPLSDHTRSL*YSLQLLLCWLHQRT
Trigger: TGTTCTTTGATGAAGCCAACACAACAGAAGCTGTAAGCTGTATCAAAGAGATCTTGTGTGATCGGACAGTGGATGGTGAGCACCTACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TTCAACAGTTCCTTTCTTGTACTATCGAGGATGCGGTTCTTGGCTTaGTGGAAAAACCCAGTGGACCTCATGCAGATTATGTCATCATAC +
Preference number: 5 (lower is better)
Translates to: FNSSFLVLSRMRFLA*WKNPVDLMQIMSSY
Trigger: GTATGATGACATAATCTGCATGAGGTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCGATAGTACAAGAAAGGAACTGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp TATTCCACTCTCGAGACATTCTGGAACTGTTTGACCAGATCCCTTTaGAGAGCCAATATCTCAGGCAGGAATTTCACCAACCTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: YSTLETFWNCLTRSL*RANISGRNFTNLSS
Trigger: AGAACTAAGGTTGGTGAAATTCCTGCCTGAGATATTGGCTCTGCAAAGGGATCTGGTCAAACAGTTCCAGAATGTCTCGAGAGTGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGATGTCTTCCAGGGCCTaGTGCAGCCAGGCAACAAGC +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLMSSRA*CSQATS
Trigger: GCTTGTTGCCTGGCTGCACAAGGCCCTGGAAGACAT...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp CTATCACATTGTAGGGTGAGTGTAGGCCTTGAATCCAGTCTGTGCCCACACTTTTTCTCCACTTCTGTATaGCTGTTGTGGTCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LSHCRVSVGLESSLCPHFFSTSV*LLWSFF
Trigger: AAAGAAAGACCACAACAGCAATACAGAAGTGGAGAA...AAAGTGTGGGCACAGACTGGATTCAAGGCCTACACTCACCCTACAATGTGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGCTCAGGGCCTGGATGTaGTCTTTACCACTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: FISTLDFLGLVWQFSCILLRAWM*SLPLKF
Trigger: GAACTTCAGTGGTAAAGACAACATCCAGGCCCTGAG...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCCCTCTGCCAATTCCTTaGACTGGCTTGTCTCTATCT +
Preference number: 5 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCPLPIP*TGLSLS
Trigger: AGATAGAGACAAGCCAGTCAAAGGAATTGGCAGAGG...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGGGGGCGTGTTATCCTaGAAGCACATGGTAGAAACA +
Preference number: 5 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHGGVLS*KHMVET
Trigger: TGTTTCTACCATGTGCTTCAAGGATAACACGCCCCC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCCTGGGAAACACCCATaGGCATGGATGGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQPGKHP*AWMALL
Trigger: AAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGGATGGAGGCTGCCATaGGGGGAACGGTACAAAGCA +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQGWRLP*GERYKA
Trigger: TGCTTTGTACCGTTCCCCCAATGGCAGCCTCCATCC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTCTGCCTCCAATTGCTTaGCTTCTGGATGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCILPPIA*LLDGGC
Trigger: GCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAG...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGTTCACTGCCTCCAATaGCTTTGCTTCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHVHCLQ*LCFWME
Trigger: CTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAAC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGGTCTTCAGGCATTGTaGGAAGAAAAGCATTCGCCA +
Preference number: 5 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCGLQAL*EEKHSP
Trigger: TGGCGAATGCTTTTCTTCCAACAATGCCTGAAGACC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCTCCTGCCCAGCATCTaGGTTAGCTGCTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLLLPSI*VSCSRS
Trigger: AGACCTGGAGCAGCTAACCAAGATGCTGGGCAGGAG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTACAGGCACCGTTTCCTaGCCGTTCTTCTGTTCCACG +
Preference number: 5 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCITGTVS*PFFCST
Trigger: CGTGGAACAGAAGAACGGCAAGGAAACGGTGCCTGT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 90 bp TCATATCTGGGCAAGTTATCAAAGTCAATGTTGAAGGGCACTCTCTaGAGCCTCAGCCCATCAAACAGTTCTTTGGTCATGACGTCTTTT +
Preference number: 5 (lower is better)
Translates to: SYLGKLSKSMLKGTL*SLSPSNSSLVMTSF
Trigger: AAAAGACGTCATGACCAAAGAACTGTTTGATGGGCTGAGGCTTCAGAGAGTGCCCTTCAACATTGACTTTGATAACTTGCCCAGATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 90 bp AGAGACAACTCGCAGACAACGATTCACGTGTTCTCCTTTCTTCTGTaGCTGTTCATAGATGAACTCATATTCCACAGTATCCTTGCTACT +
Preference number: 5 (lower is better)
Translates to: RDNSQTTIHVFSFLL*LFIDELIFHSILAT
Trigger: AGTAGCAAGGATACTGTGGAATATGAGTTCATCTATGAACAGGCACAGAAGAAAGGAGAACACGTGAATCGTTGTCTGCGAGTTGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 90 bp TACTTGAGAAGCAGTTTTAACAGCACAGAGCGGATGACAGGAGTCTaGTCAACAACATCATCAAATGGAGACAGAGACTTTGTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: YLRSSFNSTERMTGV*STTSSNGDRDFVCS
Trigger: TGAACACACAAAGTCTCTGTCTCCATTTGATGATGTTGTTGACCAGACTCCTGTCATCCGCTCTGTGCTGTTAAAACTGCTTCTCAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACGTATCTCTTCTCTaGCTTGAGGAACAGCAGATC +
Preference number: 5 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHHVSLL*LEEQQI
Trigger: GATCTGCTGTTCCTCAAGCAAGAGAAGAGATACGTG...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGGTCCTGGGAAACAGTaGGTGAGAACTTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEGPGKQ*VRTCLA
Trigger: TGCCAGACAAGTTCTCACCAACTGTTTCCCAGGACC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTTCATGGAAGCTGTACTaGAGAAGCAGTTTTAACAGC +
Preference number: 5 (lower is better)
Translates to: WVVHEALQLLSAPWISLGSWKLY*RSSFNS
Trigger: GCTGTTAAAACTGCTTCTCAAGTACAGCTTCCATGA...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCTGCCTCCAATTGCTTaGCTTCTGGATGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQLPPIA*LLDGGC
Trigger: GCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCAAATGCTTCTCCCAGTaGTTCCTGCATCCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCKCFSQ*FLHPLV
Trigger: AACCAAAGGATGCAGGAACAACTGGGAGAAGCATTT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGAGCTCCTCTTTGTATaGCACATCAATTTCCCGAAA +
Preference number: 5 (lower is better)
Translates to: WVVHEALQLLSAPWISLGELLFV*HINFPK
Trigger: TTTCGGGAAATTGATGTGCAATACAAAGAGGAGCTC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCTTACTAGAGTATCCTaGAGGCTCCAATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHLTRVS*RLQLGL
Trigger: CAACCCCAATTGGAGCCTCAAGGATACTCTAGTAAG...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTCTTCATGTTCTGGTTaGAGATCTTCCTTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: FISTLDFLGLVWQFSCILSSCSG*RSSLAL
Trigger: CAGGGCTAAGGAAGATCTCAAACCAGAACATGAAGA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCCTCCTGAAGGGTGCTaGTCACCAAGTCTTCGTAAG +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQPPEGC*SPSLRK
Trigger: CTTACGAAGACTTGGTGACAAGCACCCTTCAGGAGG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCCCTTCCTCCGTGATGTaGTCTATGATTTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCPSSVM*SMIFSL
Trigger: CAATGAGAAAATCATAGACAACATCACGGAGGAAGG...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGGGGAGTCTAGCTTGCTaGCCATTTCTCGGATGTCAG +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLGSLAC*PFLGCQ
Trigger: CTGACATCCGAGAAATGGCAAGCAAGCTAGACTCCC...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTAGATCATGGATGGTGTaGTCCCTCCATGGACCTTCA +
Preference number: 5 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIRSWMV*SLHGPS
Trigger: TGAAGGTCCATGGAGGGACAACACCATCCATGATCT...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCAGCTTACAGCTTCTGTaGTGTTGGCTTCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCSLQLL*CWLHQR
Trigger: TCTTTGATGAAGCCAACACAACAGAAGCTGTAAGCT...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGTGATCCTAATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACGTGACATTCTGCAGTTaGGTGACATCTGAAGCCATA +
Preference number: 5 (lower is better)
Translates to: CDPNTFLSNSARNWTLGHVTFCS*VTSEAI
Trigger: TATGGCTTCAGATGTCACCAAACTGCAGAATGTCAC...GTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATTAGGATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTGGATCAGAGAGGATCTaGCTTTCCTTAATGAATTTG +
Preference number: 5 (lower is better)
Translates to: WVVHEALQLLSAPWISLGGSERI*LSLMNL
Trigger: CAAATTCATTAAGGAAAGCAAGATCCTCTCTGATCC...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCAGGGGCTTCAAAATTaGGTTGTGTCCACAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEQGLQN*VVSTEE
Trigger: CTCCTCTGTGGACACAACCAAATTTTGAAGCCCCTG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGGAGCTCTGTGCCATTTaGTTCTTGATGTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: FISTLDFLGLVWQFSCILELCAI*FLMSMK
Trigger: CTTCATGGACATCAAGAACAAAATGGCACAGAGCTC...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS GCA 90 bp TTTTTGTCAAGATGCTTCAGTTCACGTAGCAGAAGAGTTTCAAAATaGTTCTCCCAGTTGTTCCTGCATCCTTTGGTTGACAATTCTGCA +
Preference number: 5 (lower is better)
Translates to: FLSRCFSSRSRRVSK*FSQLFLHPLVDNSA
Trigger: TGCAGAATTGTCAACCAAAGGATGCAGGAACAACTGGGAGAAGCATTTTGAAACTCTTCTGCTACGTGAACTGAAGCATCTTGACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCTCTTGGAGTTCTTCTaGGGTGGAGACTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLLLEFF*GGDFCM
Trigger: CATGCAGAAGTCTCCACCCAAGAAGAACTCCAAGAG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGGTTTCCAAAATCCACTaGCACAAGGTGTTTCACTCT +
Preference number: 5 (lower is better)
Translates to: FISTLDFLGLVWQFSCILVSKIH*HKVFHS
Trigger: AGAGTGAAACACCTTGTGCAAGTGGATTTTGGAAAC...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TGGGTTGTTCATGAGGCTTTACAGCTTTTATCAGCACCTTGGATTTCCTTGGGTCTTATTGCTGAGGTCTaGAGAGTGGATTATTTCAAT +
Preference number: 5 (lower is better)
Translates to: WVVHEALQLLSAPWISLGLIAEV*RVDYFN
Trigger: ATTGAAATAATCCACTCTCAAGACCTCAGCAATAAG...ACCCAAGGAAATCCAAGGTGCTGATAAAAGCTGTAAAGCCTCATGAACAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGACAAGCCGCTGCATGTaGCTGAAGACCTCTGAAAAC +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLTSRCM*LKTSEN
Trigger: GTTTTCAGAGGTCTTCAGCAACATGCAGCGGCTTGT...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCAGTATCTGTCAGCCTaGCTTTCACAGGCACTGGTA +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQQYLSA*LSQALV
Trigger: TACCAGTGCCTGTGAAAGCAAGGCTGACAGATACTG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGTTCTGCAGCCAGCACTaGTCTTCTGGTGTACTGAGT +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQFCSQH*SSGVLS
Trigger: ACTCAGTACACCAGAAGACAAGTGCTGGCTGCAGAA...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATACCTTTCTTTCTAACAGTGCTAGGAATTGGACTTTAGGGCACCACAGATGCGGATCAGAGAGGATCTaGCTTTCCTTAATGAATTTG +
Preference number: 5 (lower is better)
Translates to: NTFLSNSARNWTLGHHRCGSERI*LSLMNL
Trigger: CAAATTCATTAAGGAAAGCAAGATCCTCTCTGATCC...GCATCTGTGGTGCCCTAAAGTCCAATTCCTAGCACTGTTAGAAAGAAAGGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTTATCAGCACCTTGGATTTCCTTGGGTTAGTGTGGCAATTTTCATGCATCTTGTGTGCCATTTTGTTCTaGATGTCCATGAAGAGATGC +
Preference number: 5 (lower is better)
Translates to: FISTLDFLGLVWQFSCILCAILF*MSMKRC
Trigger: GCATCTCTTCATGGACATCAAGAACAAAATGGCACA...CAAGATGCATGAAAATTGCCACACTAACCCAAGGAAATCCAAGGTGCTGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCTTACTAGAGTATCCTaGAGGCTCCAATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: LYITVGNTTQTVMTLKAELTRVS*RLQLGL
Trigger: CAACCCCAATTGGAGCCTCAAGGATACTCTAGTAAG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CCA 90 bp TTGCTGAAGACCTCTGAAAACTTCTCCACTTCTGTATTGCTGTTGTaGTCTTTCTTTCCAGACATGAGCATCAGCTTATTTAAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: LLKTSENFSTSVLLL*SFFPDMSISLFKSS
Trigger: GGAACTTTTAAATAAGCTGATGCTCATGTCTGGAAAGAAAGACCACAACAGCAATACAGAAGTGGAGAAGTTTTCAGAGGTCTTCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCTCCTTTTTACTCATTaGGGTGGTCCAGGAGGCATT +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLLLFTH*GGPGGI
Trigger: AATGCCTCCTGGACCACCCAAATGAGTAAAAAGGAG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGAAATTTCTGCAAGTCTaGACAGGAGAGCCCCTCAAG +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLKFLQV*TGEPLK
Trigger: CTTGAGGGGCTCTCCTGTCAAGACTTGCAGAAATTT...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGCCAGTAAAAGCTGACTaGCAAAAGATAGACGCCTCA +
Preference number: 5 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEPVKAD*QKIDAS
Trigger: TGAGGCGTCTATCTTTTGCAAGTCAGCTTTTACTGG...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGACAGTTGGTGAGAACTaGTCTGGCAAGTCAGTTAAG +
Preference number: 5 (lower is better)
Translates to: LYITVGNTTQTVMTLKAETVGEN*SGKSVK
Trigger: CTTAACTGACTTGCCAGACAAGTTCTCACCAACTGT...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGGCAGGTCTTCAGGCATaGTTGGAAGAAAAGCATTCG +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLAGLQA*LEEKHS
Trigger: CGAATGCTTTTCTTCCAACAATGCCTGAAGACCTGC...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCTTACTAGAGTATCCTaGAGGCTCCAATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLLTRVS*RLQLGL
Trigger: CAACCCCAATTGGAGCCTCAAGGATACTCTAGTAAG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTGTCATGTGGTCACCATaGAAGAAAACATATGGATGG +
Preference number: 5 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIVMWSP*KKTYGW
Trigger: CCATCCATATGTTTTCTTCAATGGTGACCACATGAC...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGAAATGCTTCTCCCAGTaGTTCCTGCATCCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQKCFSQ*FLHPLV
Trigger: AACCAAAGGATGCAGGAACAACTGGGAGAAGCATTT...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGACATTCTGGAACTGTTaGACCAGATCCCTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLTFWNC*TRSLCR
Trigger: TCTGCAAAGGGATCTGGTCAAACAGTTCCAGAATGT...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGTGTGCCATTTTGTTCTaGATGTCCATGAAGAGATGC +
Preference number: 5 (lower is better)
Translates to: LYITVGNTTQTVMTLKAECAILF*MSMKRC
Trigger: GCATCTCTTCATGGACATCAAGAACAAAATGGCACA...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGAGCTCTGTGCCATTTaGTTCTTGATGTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQELCAI*FLMSMK
Trigger: CTTCATGGACATCAAGAACAAAATGGCACAGAGCTC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS-3UTR CAA 90 bp TTGTACATCACAGTGGGTAATACTACACAGACAGTTATGACTTTAAAAGCAGAGGCTTTGCTTTTAGTTTaGTATGCAGTGTGTTCACGT +
Preference number: 5 (lower is better)
Translates to: LYITVGNTTQTVMTLKAEALLLV*YAVCSR
Trigger: ACGTGAACACACTGCATACAAAACTAAAAGCAAAGC...CTCTGCTTTTAAAGTCATAACTGTCTGTGTAGTATTACCCACTGTGATGTACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGTCATGTGGTCACCATaGAAGAAAACATATGGATGG +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQVMWSP*KKTYGW
Trigger: CCATCCATATGTTTTCTTCAATGGTGACCACATGAC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp ATAGGTATGGTAAACATGATGCAGTCTACTTTGCCAATGTTAGATCCATGCATTTGGTTCTCTTCTTGCTaGTTTAGAAGAACATGGAGA +
Preference number: 5 (lower is better)
Translates to: IGMVNMMQSTLPMLDPCIWFSSC*FRRTWR
Trigger: TCTCCATGTTCTTCTAAACAAGCAAGAAGAGAACCA...AATGCATGGATCTAACATTGGCAAAGTAGACTGCATCATGTTTACCATACCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGGTTCCCTGTGTTTTGTaGATTTCATTGATGGCAGTA +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQVPCVL*ISLMAV
Trigger: TACTGCCATCAATGAAATCAACAAAACACAGGGAAC...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGCTTTCCTTAATGAATTaGTTCACTGCCTCCAATTGC +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLLSLMN*FTASNC
Trigger: GCAATTGGAGGCAGTGAACAAATTCATTAAGGAAAG...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AACACATCTTTACTTGAAATCTCAAGACATGAGAACTGGAAAGTGCTTTGTTTGATAGCTGGCAAGTTTTaGTCAAGATGCTTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: NTSLLEISRHENWKVLCLIAGKF*SRCFSS
Trigger: TGAACTGAAGCATCTTGACAAAAACTTGCCAGCTAT...CAAACAAAGCACTTTCCAGTTCTCATGTCTTGAGATTTCAAGTAAAGATGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS-3UTR CAA 90 bp AATCATTCATCAGACTTAAGGAAATTTTGGAATAGGCACATGATCCAGAAACAGCTTATTGCTGAGGTCTaGAGAGTGGATTATTTCAAT +
Preference number: 5 (lower is better)
Translates to: NHSSDLRKFWNRHMIQKQLIAEV*RVDYFN
Trigger: ATTGAAATAATCCACTCTCAAGACCTCAGCAATAAG...CTGTTTCTGGATCATGTGCCTATTCCAAAATTTCCTTAAGTCTGATGAATGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp ACTGGGAGCAAGGTTGCTCTGAGCGTCGGTGCGTTCTaGAGCCTGACCCTGCAGAGGGCTGCCGCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: TGSKVALSVGAF*SLTLQRAAAAL
Trigger: GAGGGCAGCGGCAGCCCTCTGCAGGGTCAGGCTGCAGAACGCACCGACGCTCAGAGCAACCTTGCTCCCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CAAGGTCACTGGGAGCAAGGTTGCTCTGAGCGTCGGTaGGTTCTGCAGCCTGACCCTGCAGAGGGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: QGHWEQGCSERR*VLQPDPAEGCR
Trigger: GCGGCAGCCCTCTGCAGGGTCAGGCTGCAGAACGCACCGACGCTCAGAGCAACCTTGCTCCCAGTGACCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GGCTCCGGTGCAGCAGCCTGCTGGGGTGCAGCCGCCTaGTGGGTTTTCACAGCTGCTGCAAAGTTTCTGCCC +
Preference number: 6 (lower is better)
Translates to: GSGAAACWGAAA*WVFTAAAKFLP
Trigger: GGGCAGAAACTTTGCAGCAGCTGTGAAAACCCAGCAGGCGGCTGCACCCCAGCAGGCTGCTGCACCGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CCGCTTCGGGACCTGATAATGGCTCTGCAGGTAAGCTaGGATGTTCGGGAGCGGGGCCTGGGGCACCAGGGG +
Preference number: 6 (lower is better)
Translates to: PLRDLIMALQVS*DVRERGLGHQG
Trigger: CCCCTGGTGCCCCAGGCCCCGCTCCCGAACATCCAAGCTTACCTGCAGAGCCATTATCAGGTCCCGAAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CGCACTTGTAGGCTCCGGTGCAGCAGCCTGCTGGGGTaGAGCCGCCTGCTGGGTTTTCACAGCTGCTGCAAA +
Preference number: 6 (lower is better)
Translates to: RTCRLRCSSLLG*SRLLGFHSCCK
Trigger: TTTGCAGCAGCTGTGAAAACCCAGCAGGCGGCTGCACCCCAGCAGGCTGCTGCACCGGAGCCTACAAGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TGTATCCCGTGGGTTAAACGCACTTGTAGGCTCCGGTaGAGCAGCCTGCTGGGGTGCAGCCGCCTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: CIPWVKRTCRLR*SSLLGCSRLLG
Trigger: ACCCAGCAGGCGGCTGCACCCCAGCAGGCTGCTGCACCGGAGCCTACAAGTGCGTTTAACCCACGGGATACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CCTGCAGGCCTTTGGGGAGTGGCCGCTCCACAGGAGTaGCACCCATCGTGGCCAGATGAGCAAGGCATCTAC +
Preference number: 6 (lower is better)
Translates to: PAGLWGVAAPQE*HPSWPDEQGIY
Trigger: GTAGATGCCTTGCTCATCTGGCCACGATGGGTGGCACTCCTGTGGAGCGGCCACTCCCCAAAGGCCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GAGTGGCCACACAAGATCAGGTTAGGCTGGCCAGCCTaGAGGCCTTTGGGGAGTGGCCGCTCCACAGGAGTG +
Preference number: 6 (lower is better)
Translates to: EWPHKIRLGWPA*RPLGSGRSTGV
Trigger: CACTCCTGTGGAGCGGCCACTCCCCAAAGGCCTGCAGGCTGGCCAGCCTAACCTGATCTTGTGTGGCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CAGGGGCTGCCTGGGGGCCTGCATGTAGATGGCCAGTaGAGCTGGCAACACCTCCGAGTGGCCACACAAGAT +
Preference number: 6 (lower is better)
Translates to: QGLPGGLHVDGQ*SWQHLRVATQD
Trigger: ATCTTGTGTGGCCACTCGGAGGTGTTGCCAGCTGCACTGGCCATCTACATGCAGGCCCCCAGGCAGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CTCTGGCCACCTCCTGCAGGTACTCCACTGAAGCAATaGGGACGGGCTCCTGGCCTTGCAGTCCCGGGGAAT +
Preference number: 6 (lower is better)
Translates to: LWPPPAGTPLKQ*GRAPGLAVPGN
Trigger: ATTCCCCGGGACTGCAAGGCCAGGAGCCCGTCCGCATTGCTTCAGTGGAGTACCTGCAGGAGGTGGCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp ATTGGCATGTTCTCTGTGTCCAGGGGATGCCCAGGCTaGCTGGCCGCACCACCCTGCTGGGCTTGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: IGMFSVSRGCPG*LAAPPCWAWFW
Trigger: CCAGAACCAAGCCCAGCAGGGTGGTGCGGCCAGCCAGCCTGGGCATCCCCTGGACACAGAGAACATGCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TGGGGAGTGGCCGCTCCACAGGAGTGCCACCCATCGTaGCCAGATGAGCAAGGCATCTACCCAGGGCATCCA +
Preference number: 6 (lower is better)
Translates to: WGVAAPQECHPS*PDEQGIYPGHP
Trigger: TGGATGCCCTGGGTAGATGCCTTGCTCATCTGGCCACGATGGGTGGCACTCCTGTGGAGCGGCCACTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CACAAGATCAGGTTAGGCTGGCCAGCCTGCAGGCCTTaGGGGAGTGGCCGCTCCACAGGAGTGCCACCCATC +
Preference number: 6 (lower is better)
Translates to: HKIRLGWPACRP*GSGRSTGVPPI
Trigger: GATGGGTGGCACTCCTGTGGAGCGGCCACTCCCCAAAGGCCTGCAGGCTGGCCAGCCTAACCTGATCTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GGGACTGCCCTCGGTCAGATACTTCTGCTACACCACTaGACTGTGGGCTCCCCAACACGTGGCCAGTCTGCG +
Preference number: 6 (lower is better)
Translates to: GTALGQILLLHH*TVGSPTRGQSA
Trigger: CGCAGACTGGCCACGTGTTGGGGAGCCCACAGTCCAGTGGTGTAGCAGAAGTATCTGACCGAGGGCAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp ACCAGGGTGGGTATTCCCTTGAGGGTCAGCCTGGGCTaGCCCTGTAGGAACCGGCTGCTGATCTGCCGTTGG +
Preference number: 6 (lower is better)
Translates to: TRVGIPLRVSLG*PCRNRLLICRW
Trigger: CCAACGGCAGATCAGCAGCCGGTTCCTACAGGGCAAGCCCAGGCTGACCCTCAAGGGAATACCCACCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS TCA 72 bp GAGGACAGGGCTCAGGTCGCTGTGGAGGGCTTCTGGTaGGCCAGCACTCGGAATGAGGAGATAGCACAGCGA +
Preference number: 6 (lower is better)
Translates to: EDRAQVAVEGFW*ASTRNEEIAQR
Trigger: TCGCTGTGCTATCTCCTCATTCCGAGTGCTGGCTCACCAGAAGCCCTCCACAGCGACCTGAGCCCTGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CTGCTGGGGTGCAGCCGCCTGCTGGGTTTTCACAGCTaGTGCAAAGTTTCTGCCCTCTCCTGGCTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LLGCSRLLGFHS*CKVSALSWLPL
Trigger: CAGAGGAAGCCAGGAGAGGGCAGAAACTTTGCAGCAGCTGTGAAAACCCAGCAGGCGGCTGCACCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GTGCGCTCGTGTGCACAGGCTCTGGAAGAACTCCTCTaGCTGGCAGCCCACTTCATAGCTCAGCTGGTCTGC +
Preference number: 6 (lower is better)
Translates to: VRSCAQALEELL*LAAHFIAQLVC
Trigger: GCAGACCAGCTGAGCTATGAAGTGGGCTGCCAGGCAGAGGAGTTCTTCCAGAGCCTGTGCACACGAGCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TTGGACCCGCTTCCAAAGGGTATGCCTGAAGGTGCCTaGCTCCTGCAGGGCATCCTGATTCGCAGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: LDPLPKGMPEGA*LLQGILIRSLP
Trigger: AGGGAGGCTGCGAATCAGGATGCCCTGCAGGAGGCAGGCACCTTCAGGCATACCCTTTGGAAGCGGGTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GCCGCTGCCCTCAGTGTGAACGAAGCCATCCTCCATTaGCATGTTCTCTGTGTCCAGGGGATGCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: AAALSVNEAILH*HVLCVQGMPRL
Trigger: CAGCCTGGGCATCCCCTGGACACAGAGAACATGCCAATGGAGGATGGCTTCGTTCACACTGAGGGCAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TTAAACGCACTTGTAGGCTCCGGTGCAGCAGCCTGCTaGGGTGCAGCCGCCTGCTGGGTTTTCACAGCTGCT +
Preference number: 6 (lower is better)
Translates to: LNALVGSGAAAC*GAAACWVFTAA
Trigger: AGCAGCTGTGAAAACCCAGCAGGCGGCTGCACCCCAGCAGGCTGCTGCACCGGAGCCTACAAGTGCGTTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CCCAGGTGTCCTCGGGCTGGCTCTTGGAGTTCTTCTTaGGTGGAGACTTCTGCATGCAGGTGTGCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: PRCPRAGSWSSS*VETSACRCAGG
Trigger: CCCTCCTGCACACCTGCATGCAGAAGTCTCCACCCAAGAAGAACTCCAAGAGCCAGCCCGAGGACACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TCCACGCGCAGCAGGGCCATCTTACTCTGCATGAACTaGAGGGGCTGGCTCCTAGTGGGTGCTTTGTCCCGA +
Preference number: 6 (lower is better)
Translates to: STRSRAILLCMN*RGWLLVGALSR
Trigger: TCGGGACAAAGCACCCACTAGGAGCCAGCCCCTCCAGTTCATGCAGAGTAAGATGGCCCTGCTGCGCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093902.12
CDS CCA 72 bp ACCCTGAGCAGGCTGCTCAGGATGAGGTGGACCACATaGATGGTCTCGTCGGCACTCCTGCCCAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: TLSRLLRMRWTT*MVSSALLPSIL
Trigger: CAAGATGCTGGGCAGGAGTGCCGACGAGACCATCCATGTGGTCCACCTCATCCTGAGCAGCCTGCTCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GCAGAAAGGGCTGGGCCCCCATCTAGGGGCAGGCCCTaGTCCACTGAGGGCTTAGAGGTATTGAGGTCCTTC +
Preference number: 6 (lower is better)
Translates to: AERAGPPSRGRP*STEGLEVLRSF
Trigger: GAAGGACCTCAATACCTCTAAGCCCTCAGTGGACAAGGGCCTGCCCCTAGATGGGGGCCCAGCCCTTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GCCCAGGTGTCCTCGGGCTGGCTCTTGGAGTTCTTCTaGGGTGGAGACTTCTGCATGCAGGTGTGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: AQVSSGWLLEFF*GGDFCMQVCRR
Trigger: CCTCCTGCACACCTGCATGCAGAAGTCTCCACCCAAGAAGAACTCCAAGAGCCAGCCCGAGGACACCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GGTCCTTCACTTCTGCAAGGTCACTGGGAGCAAGGTTaGTCTGAGCGTCGGTGCGTTCTGCAGCCTGACCCT +
Preference number: 6 (lower is better)
Translates to: GPSLLQGHWEQG*SERRCVLQPDP
Trigger: AGGGTCAGGCTGCAGAACGCACCGACGCTCAGAGCAACCTTGCTCCCAGTGACCTTGCAGAAGTGAAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AGGTACTCATCCACGCGCAGCAGGGCCATCTTACTCTaGATGAACTGGAGGGGCTGGCTCCTAGTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: RYSSTRSRAILL*MNWRGWLLVGA
Trigger: AGCACCCACTAGGAGCCAGCCCCTCCAGTTCATGCAGAGTAAGATGGCCCTGCTGCGCGTGGATGAGTACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093902.12
CDS GCA 72 bp CCTTCCATGTCTCCCAGCAATGATCCCTTCCAGCCATaGTTCTCTGGGAAGCCGATCTCCACCAGCCGTCGC +
Preference number: 6 (lower is better)
Translates to: PSMSPSNDPFQP*FSGKPISTSRR
Trigger: GCGACGGCTGGTGGAGATCGGCTTCCCAGAGAAGCATGGCTGGAAGGGATCATTGCTGGGAGACATGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp ACAGGGGTGGCCAACTTGCCTTTGAGTTCAGCTTCCTaGTCTCCGTGCTTGGAGGCTACAGGGCTCACAGGC +
Preference number: 6 (lower is better)
Translates to: TGVANLPLSSAS*SPCLEATGLTG
Trigger: GCCTGTGAGCCCTGTAGCCTCCAAGCACGGAGACCAGGAAGCTGAACTCAAAGGCAAGTTGGCCACCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CTTCAAGGCCTGCCCAGGTGTCCTCGGGCTGGCTCTTaGAGTTCTTCTTGGGTGGAGACTTCTGCATGCAGG +
Preference number: 6 (lower is better)
Translates to: LQGLPRCPRAGS*SSSWVETSACR
Trigger: CCTGCATGCAGAAGTCTCCACCCAAGAAGAACTCCAAGAGCCAGCCCGAGGACACCTGGGCAGGCCTTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CCCTCGGTCAGATACTTCTGCTACACCACTGGACTGTaGGCTCCCCAACACGTGGCCAGTCTGCGTTCTGTC +
Preference number: 6 (lower is better)
Translates to: PSVRYFCYTTGL*APQHVASLRSV
Trigger: GACAGAACGCAGACTGGCCACGTGTTGGGGAGCCCACAGTCCAGTGGTGTAGCAGAAGTATCTGACCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TCCACGCGCAGCAGGGCCATCTTACTCTGCATGAACTaGAGGGGCTGGCTAGTGGGTGCTTTGTCCCGAAAC +
Preference number: 6 (lower is better)
Translates to: STRSRAILLCMN*RGWLVGALSRN
Trigger: GTTTCGGGACAAAGCACCCACTAGCCAGCCCCTCCAGTTCATGCAGAGTAAGATGGCCCTGCTGCGCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131035.10
CDS CAA 72 bp TGCCGCTGCCCTCAGTGTGAACGAAGCCATCCTCCATaGGCATGTTCTCTGTGTCCAGGGGATGCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: CRCPQCERSHPP*ACSLCPGDAQA
Trigger: AGCCTGGGCATCCCCTGGACACAGAGAACATGCCAATGGAGGATGGCTTCGTTCACACTGAGGGCAGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GCCTTCTGGGAAGCATCAGTCATCTTAGGGTGGCCTTaGAACGCAGAAAGGGCTGGGCCCCCATCTAGGGGC +
Preference number: 6 (lower is better)
Translates to: AFWEASVILGWP*NAERAGPPSRG
Trigger: GCCCCTAGATGGGGGCCCAGCCCTTTCTGCGTTCAAAGGCCACCCTAAGATGACTGATGCTTCCCAGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp ATGACGATGAGGCGGAAGGCAGTGTGCACTCGGCACTaGACTCGGTGGGTGCCTAGTCCAAGGTCCACGTAC +
Preference number: 6 (lower is better)
Translates to: MTMRRKAVCTRH*TRWVPSPRSTY
Trigger: GTACGTGGACCTTGGACTAGGCACCCACCGAGTCAAGTGCCGAGTGCACACTGCCTTCCGCCTCATCGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp ATGAGGAACCGCTCAGCCGGACCACAGCGTCTGGTGTaGCACAATCCAGCAGGATGGACCTGGCCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: MRNRSAGPQRLV*HNPAGWTWPLQ
Trigger: CTGAAGAGGCCAGGTCCATCCTGCTGGATTGTGCAACACCAGACGCTGTGGTCCGGCTGAGCGGTTCCTCAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp GCCAAGTCCACAAACACCTTGAGTTCGTTGATGTCTTCCAGGGCCTaGTGCAGCCAGGCAACAAGCTCCGTCTGCCGGGCAAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: AKSTNTLSSLMSSRA*CSQATSSVCRASSS
Trigger: GGAGGAGCTTGCCCGGCAGACGGAGCTTGTTGCCTGGCTGCACAAGGCCCTGGAAGACATCAACGAACTCAAGGTGTTTGTGGACTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CTCCAATTGGGGTTGAAGCTGTTCGCAGCCCGGGGGCCCTTGAGCTaGAGCACAATCATCTCATGGAGCTCCAGGAGGAAGGCGTCTAGG +
Preference number: 6 (lower is better)
Translates to: LQLGLKLFAARGPLS*STIISWSSRRKASR
Trigger: CCTAGACGCCTTCCTCCTGGAGCTCCATGAGATGATTGTGCTCAAGCTCAAGGGCCCCCGGGCTGCGAACAGCTTCAACCCCAATTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CAA 90 bp ACGAGCCTAATGAGGAACCGCTCAGCCGGACCACAGCGTCTGGTGTaGCACAATCCAGCAGGATGGACCTGGCCTCTTCAGACACCTTTC +
Preference number: 6 (lower is better)
Translates to: TSLMRNRSAGPQRLV*HNPAGWTWPLQTPF
Trigger: GAAAGGTGTCTGAAGAGGCCAGGTCCATCCTGCTGGATTGTGCAACACCAGACGCTGTGGTCCGGCTGAGCGGTTCCTCATTAGGCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp AGGTGGACCACATGGATGGTCTCGTCGGCACTCCTGCCCAGCATCTaGGTTAGCTGCTCCAGGTCTCTCTGGATGTGCTGCTGTAGGAAG +
Preference number: 6 (lower is better)
Translates to: RWTTWMVSSALLPSI*VSCSRSLWMCCCRK
Trigger: CTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCAGCTAACCAAGATGCTGGGCAGGAGTGCCGACGAGACCATCCATGTGGTCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CGTCTGTATACCAGGGTGGGTATTCCCTTGAGGGTCAGCCTGGGCTaGCCCTGTAGGAACCGGCTGCTGATCTGCCGTTGGATCTTCTCT +
Preference number: 6 (lower is better)
Translates to: RLYTRVGIPLRVSLG*PCRNRLLICRWIFS
Trigger: AGAGAAGATCCAACGGCAGATCAGCAGCCGGTTCCTACAGGGCAAGCCCAGGCTGACCCTCAAGGGAATACCCACCCTGGTATACAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS TCA 72 bp GTATGCCTGAAGGTGCCTGCCTCCTGCAGGGCATCCTaGTTCGCAGCCTCCCTGGTGACCCACTCCTTTAAA +
Preference number: 6 (lower is better)
Translates to: VCLKVPASCRAS*FAASLVTHSFK
Trigger: TTTAAAGGAGTGGGTCACCAGGGAGGCTGCGAATCAGGATGCCCTGCAGGAGGCAGGCACCTTCAGGCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CTCTGCCTGGCAGCCCACTTCATAGCTCAGCTGGTCTaGAAACAGCAAGCTGTAGACCTTGTGCCCCTGGGA +
Preference number: 6 (lower is better)
Translates to: LCLAAHFIAQLV*KQQAVDLVPLG
Trigger: TCCCAGGGGCACAAGGTCTACAGCTTGCTGTTTGCAGACCAGCTGAGCTATGAAGTGGGCTGCCAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GTATCACCAACTGGTAGTCTTCACGGTGCGCTCGTGTaGACAGGCTCTGGAAGAACTCCTCTGCCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: VSPTGSLHGALV*TGSGRTPLPGS
Trigger: GCTGCCAGGCAGAGGAGTTCTTCCAGAGCCTGTGCACACGAGCGCACCGTGAAGACTACCAGTTGGTGATAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AAAGACCACTGGGGACTGCCCTCGGTCAGATACTTCTaGTACACCACTGGACTGTGGGCTCCCCAACACGTG +
Preference number: 6 (lower is better)
Translates to: KDHWGLPSVRYF*YTTGLWAPQHV
Trigger: CACGTGTTGGGGAGCCCACAGTCCAGTGGTGTAGCAGAAGTATCTGACCGAGGGCAGTCCCCAGTGGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GTCTCGTCGGCACTCCTGCCCAGCATCTTGGTTAGCTaGTCCAGGTCTCTCTGGATGTGCTGCTGTAGGAAG +
Preference number: 6 (lower is better)
Translates to: VSSALLPSILVS*SRSLWMCCCRK
Trigger: CTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCAGCTAACCAAGATGCTGGGCAGGAGTGCCGACGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AGGTACTCATCCACGCGCAGCAGGGCCATCTTACTCTaGATGAACTGGAGGGGCTGGCTAGTGGGTGCTTTG +
Preference number: 6 (lower is better)
Translates to: RYSSTRSRAILL*MNWRGWLVGAL
Trigger: CAAAGCACCCACTAGCCAGCCCCTCCAGTTCATGCAGAGTAAGATGGCCCTGCTGCGCGTGGATGAGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131035.10
CDS CCA 72 bp CCCAGCTGTCTTCACCGGACTGGCCGCAGCATCAATTaGCGGCACTTTCTTCTCTTGTCCAGATGTCTCCCC +
Preference number: 6 (lower is better)
Translates to: PSCLHRTGRSIN*RHFLLLSRCLP
Trigger: GGGGAGACATCTGGACAAGAGAAGAAAGTGCCGCCAATTGATGCTGCGGCCAGTCCGGTGAAGACAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GAGATTCCTTCAAGGCCTGCCCAGGTGTCCTCGGGCTaGCTCTTGGAGTTCTTCTTGGGTGGAGACTTCTGC +
Preference number: 6 (lower is better)
Translates to: EIPSRPAQVSSG*LLEFFLGGDFC
Trigger: GCAGAAGTCTCCACCCAAGAAGAACTCCAAGAGCCAGCCCGAGGACACCTGGGCAGGCCTTGAAGGAATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TCTGCAAGTCTTGACAGGAGAGCCCCTCAAGCACACTaGTCTGAGACTGGCAGGCAGAGCTCACAGCCTCGA +
Preference number: 6 (lower is better)
Translates to: SASLDRRAPQAH*SETGRQSSQPR
Trigger: TCGAGGCTGTGAGCTCTGCCTGCCAGTCTCAGACCAGTGTGCTTGAGGGGCTCTCCTGTCAAGACTTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CCCAAACCTGCTGACTCCAGGCGGAGGATCATCTCCTaGGAGTGCTTCCGATATGGGTTGCAGGCAGCAATG +
Preference number: 6 (lower is better)
Translates to: PKPADSRRRIIS*ECFRYGLQAAM
Trigger: CATTGCTGCCTGCAACCCATATCGGAAGCACTCCCAGGAGATGATCCTCCGCCTGGAGTCAGCAGGTTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CAGCGTCTGGTGTTGCACAATCCAGCAGGATGGACCTaGCCTCTTCAGACACCTTTCGGTACAGCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: QRLVLHNPAGWT*PLQTPFGTAPP
Trigger: CGGAGGAGCTGTACCGAAAGGTGTCTGAAGAGGCCAGGTCCATCCTGCTGGATTGTGCAACACCAGACGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TCCTGGGAAACACCCATTGGCATGGATGGCCCTGCTTaGAGAAGCTCTGCACGAATTCCATCCCACGCTGGC +
Preference number: 6 (lower is better)
Translates to: SWETPIGMDGPA*RSSARIPSHAG
Trigger: GCCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CTGCCCAGCATCTTGGTTAGCTGCTCCAGGTCTCTCTaGATGTGCTGCTGTAGGAAGCCTTGTGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: LPSILVSCSRSL*MCCCRKPCGSW
Trigger: CCAGGACCCACAAGGCTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCAGCTAACCAAGATGCTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TCCGACTGGAAGACCACAGTCCAGACAGGTGCTCTCTaGCATTGGCCTGCCACACTCTCCCACAGAGCATGG +
Preference number: 6 (lower is better)
Translates to: SDWKTTVQTGAL*HWPATLSHRAW
Trigger: CCATGCTCTGTGGGAGAGTGTGGCAGGCCAATGCAAGAGAGCACCTGTCTGGACTGTGGTCTTCCAGTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp GACTCCAGGCGGAGGATCATCTCCTGGGAGTGCTTCCGATATGGGTaGCAGGCAGCAATGATATGCAGGCCAGAGTCCTCATGTAGGTGC +
Preference number: 6 (lower is better)
Translates to: DSRRRIISWECFRYG*QAAMICRPESSCRC
Trigger: GCACCTACATGAGGACTCTGGCCTGCATATCATTGCTGCCTGCAACCCATATCGGAAGCACTCCCAGGAGATGATCCTCCGCCTGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp GTTAAGACCTCCGACTGGAAGACCACAGTCCAGACAGGTGCTCTCTaGCATTGGCCTGCCACACTCTCCCACAGAGCATGGATGGCCTCT +
Preference number: 6 (lower is better)
Translates to: VKTSDWKTTVQTGAL*HWPATLSHRAWMAS
Trigger: AGAGGCCATCCATGCTCTGTGGGAGAGTGTGGCAGGCCAATGCAAGAGAGCACCTGTCTGGACTGTGGTCTTCCAGTCGGAGGTCTTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp CTCCTGCTTGAGCCTCCCTTCCATGTCTCCCAGCAATaGTCCCTTCCAGCCATGCTTCTCTGGGAAGCCGAT +
Preference number: 6 (lower is better)
Translates to: LLLEPPFHVSQQ*SLPAMLLWEAD
Trigger: ATCGGCTTCCCAGAGAAGCATGGCTGGAAGGGATCATTGCTGGGAGACATGGAAGGGAGGCTCAAGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GCCAACACACAGCCCGTCTCTGAATACAGTTGCTGCTaGCAGGAGCCGCTTCGGGACCTGATAATGGCTCTG +
Preference number: 6 (lower is better)
Translates to: ANTQPVSEYSCC*QEPLRDLIMAL
Trigger: CAGAGCCATTATCAGGTCCCGAAGCGGCTCCTGTCAGCAGCAACTGTATTCAGAGACGGGCTGTGTGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GCCTGTCTGAAGAGCAGATCCCCTCAGCACTCTCTATaGGCTCTTTCTCGTTGGGACTGCCGCGGGACACAA +
Preference number: 6 (lower is better)
Translates to: ACLKSRSPQHSL*ALSRWDCRGTQ
Trigger: TTGTGTCCCGCGGCAGTCCCAACGAGAAAGAGCTCATAGAGAGTGCTGAGGGGATCTGCTCTTCAGACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GGGCGTAGTAGTACTCCTGTGACAGCTGCTTTGCAGTaGACGAGCCTAATGAGGAACCGCTCAGCCGGACCA +
Preference number: 6 (lower is better)
Translates to: GRSSTPVTAALQ*TSLMRNRSAGP
Trigger: TGGTCCGGCTGAGCGGTTCCTCATTAGGCTCGTTCACTGCAAAGCAGCTGTCACAGGAGTACTACTACGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp CAGAGCATGGATGGCCTCTGGGACAAGTGTACCAGGTaGCATTTTCCAGGCCCCTCCAAGTCCTGGCGTGAA +
Preference number: 6 (lower is better)
Translates to: QSMDGLWDKCTR*HFPGPSKSWRE
Trigger: TTCACGCCAGGACTTGGAGGGGCCTGGAAAATGTCACCTGGTACACTTGTCCCAGAGGCCATCCATGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CACTGTCATGGAGTCCTCCGTCACGACACTGACTGCTaGAGAAGAAGGAGATCTGCAAACGGGGAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: HCHGVLRHDTDC*RRRRSANGEAP
Trigger: AGGAGCCTCCCCGTTTGCAGATCTCCTTCTTCTGCAGCAGTCAGTGTCGTGACGGAGGACTCCATGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AAGTTCCTTCAGTTCCTCTGTGGAGTAGGTGCGCAATaGCTCGGGGTAACCATGGCCATCAGGGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: KFLQFLCGVGAQ*LGVTMAIREEE
Trigger: CTCCTCCTCCCTGATGGCCATGGTTACCCCGAGGCATTGCGCACCTACTCCACAGAGGAACTGAAGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GGAGTAGTTCCACTTCCTCAATTGTGGTCGCTGGGGTaGAGAGCAACACCTCATCAAAGGTGGGCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: GVVPLPQLWSLG*RATPHQRWAGA
Trigger: AGCCCCTGCCCACCTTTGATGAGGTGTTGCTCTGCACCCCAGCGACCACAATTGAGGAAGTGGAACTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CCTGCTGACTCCAGGCGGAGGATCATCTCCTGGGAGTaGTTCCGATATGGGTTGCAGGCAGCAATGATATGC +
Preference number: 6 (lower is better)
Translates to: PADSRRRIISWE*FRYGLQAAMIC
Trigger: GCATATCATTGCTGCCTGCAACCCATATCGGAAGCACTCCCAGGAGATGATCCTCCGCCTGGAGTCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GAGCTCAGAGAAGGCAGCCTGCCCTTGCATGGCATCTaGCACAATGATCTTGGCAAGGGATTTGGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: ELREGSLPLHGI*HNDLGKGFGAA
Trigger: GGCAGCTCCAAATCCCTTGCCAAGATCATTGTGGCAGATGCCATGCAAGGGCAGGCTGCCTTCTCTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp ACCACCACTGAGACATACTGCCCCAGGTCCTTACCCTaGTGGAATCGAGCGCACTGCTTGAAGGTGCTGATG +
Preference number: 6 (lower is better)
Translates to: TTTETYCPRSLP*WNRAHCLKVLM
Trigger: CATCAGCACCTTCAAGCAGTGCGCTCGATTCCAGCAGGGTAAGGACCTGGGGCAGTATGTCTCAGTGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TCATTGATGGCAGTATACTTGGCAGAGGCTACGAGCTaGGCGCTACGGGTGCCATCGTCAAAGTCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: SLMAVYLAEATS*ALRVPSSKSAW
Trigger: CCAGGCAGACTTTGACGATGGCACCCGTAGCGCGCAGCTCGTAGCCTCTGCCAAGTATACTGCCATCAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CAGTGTCATTTCACACCCAGCCAAGCTGTGCTTCTCTaGTGCTTGACTGAGGCTGCTCAGAACCTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: QCHFTPSQAVLL*CLTEAAQNLGV
Trigger: CACCCCCAGGTTCTGAGCAGCCTCAGTCAAGCAGCAGAGAAGCACAGCTTGGCTGGGTGTGAAATGACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp ATCTTGGTTAGCTGCTCCAGGTCTCTCTGGATGTGCTaGTGTAGGAAGCCTTGTGGGTCCTGGACCCAAGGC +
Preference number: 6 (lower is better)
Translates to: ILVSCSRSLWMC*CRKPCGSWTQG
Trigger: GCCTTGGGTCCAGGACCCACAAGGCTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCAGCTAACCAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TTGGGTGGTCCAGGAGGCATTGGAATCGGACTCCTCTaGTTTCTCCAGTTCCTTGCCTGGGTCTGTGGACGA +
Preference number: 6 (lower is better)
Translates to: LGGPGGIGIGLL*FLQFLAWVCGR
Trigger: TCGTCCACAGACCCAGGCAAGGAACTGGAGAAACCAGAGGAGTCCGATTCCAATGCCTCCTGGACCACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AGCAGGGCCATCTTACTCTGCATGAACTGGAGGGGCTaGCTCCTAGTGGGTGCTTTGTCCCGAAACTCTGAG +
Preference number: 6 (lower is better)
Translates to: SRAILLCMNWRG*LLVGALSRNSE
Trigger: CTCAGAGTTTCGGGACAAAGCACCCACTAGGAGCCAGCCCCTCCAGTTCATGCAGAGTAAGATGGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093902.12
CDS CCA 72 bp GTTGGAAAGCTTCACTGCAGAACTCCACTGGGTCCATaGCAGGGTCTGTGTGGCTCCTCTCTGGAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: VGKLHCRTPLGP*QGLCGSSLESA
Trigger: AGCTGACTCCAGAGAGGAGCCACACAGACCCTGCCATGGACCCAGTGGAGTTCTGCAGTGAAGCTTTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GTAAGGTCGTTGGAAAGCTTCACTGCAGAACTCCACTaGGTCCATGGCAGGGTCTGTGTGGCTCCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: VRSLESFTAELH*VHGRVCVAPLW
Trigger: CCAGAGAGGAGCCACACAGACCCTGCCATGGACCCAGTGGAGTTCTGCAGTGAAGCTTTCCAACGACCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CAGGCGGAGGATCATCTCCTGGGAGTGCTTCCGATATaGGTTGCAGGCAGCAATGATATGCAGGCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: QAEDHLLGVLPI*VAGSNDMQARV
Trigger: GACTCTGGCCTGCATATCATTGCTGCCTGCAACCCATATCGGAAGCACTCCCAGGAGATGATCCTCCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CAGCTGCCCAAAGTCCCATACCAAAGGAATGAGGCTTaGAGGCAGAGCATGAACACGGTAGACCAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: QLPKVPYQRNEA*RQSMNTVDQLP
Trigger: CGGCAGCTGGTCTACCGTGTTCATGCTCTGCCTCCAAGCCTCATTCCTTTGGTATGGGACTTTGGGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CCTCATCCAGGATGGCCCTGCTGCTATTGTATGGTTTaGGAAAGCACCTGGCGATGGCAGTGCGGTAGGATG +
Preference number: 6 (lower is better)
Translates to: PHPGWPCCYCMV*ESTWRWQCGRM
Trigger: CATCCTACCGCACTGCCATCGCCAGGTGCTTTCCCAAACCATACAATAGCAGCAGGGCCATCCTGGATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AATCGAGCGCACTGCTTGAAGGTGCTGATGATACCTTaGGGGGTGGAGTGTGGGCTGCACTGGAATGACACC +
Preference number: 6 (lower is better)
Translates to: NRAHCLKVLMIP*GVECGLHWNDT
Trigger: GGTGTCATTCCAGTGCAGCCCACACTCCACCCCCCAAGGTATCATCAGCACCTTCAAGCAGTGCGCTCGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp ACGTCTGCTGTAGGATTTGCAGCGCCACATAGTTCCTaGTCAGCACGAGCAAGTAACGGGACTCAGCGCCGT +
Preference number: 6 (lower is better)
Translates to: TSAVGFAAPHSS*SARASNGTQRR
Trigger: ACGGCGCTGAGTCCCGTTACTTGCTCGTGCTGACCAGGAACTATGTGGCGCTGCAAATCCTACAGCAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GGACCACAGCGTCTGGTGTTGCACAATCCAGCAGGATaGACCTGGCCTCTTCAGACACCTTTCGGTACAGCT +
Preference number: 6 (lower is better)
Translates to: GPQRLVLHNPAG*TWPLQTPFGTA
Trigger: AGCTGTACCGAAAGGTGTCTGAAGAGGCCAGGTCCATCCTGCTGGATTGTGCAACACCAGACGCTGTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GCTATCATGCTCGCCAGGATGGGAGTGACCACATCTTaGACCCGCTTCCAAAGGGTATGCCTGAAGGTGCCT +
Preference number: 6 (lower is better)
Translates to: AIMLARMGVTTS*TRFQRVCLKVP
Trigger: AGGCACCTTCAGGCATACCCTTTGGAAGCGGGTCCAAGATGTGGTCACTCCCATCCTGGCGAGCATGATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AAGCGCCGCTTGTCTTCAGCCAGTTCTGAGCCTTCCTaGAGCTCTGAGAGGAAGTCAGCTGCCAAGTCAAGG +
Preference number: 6 (lower is better)
Translates to: KRRLSSASSEPS*SSERKSAAKSR
Trigger: CCTTGACTTGGCAGCTGACTTCCTCTCAGAGCTCCAGGAAGGCTCAGAACTGGCTGAAGACAAGCGGCGCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GCATTGGAATCGGACTCCTCTGGTTTCTCCAGTTCCTaGCCTGGGTCTGTGGACGAGAGTAGGACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ALESDSSGFSSS*PGSVDESRTSS
Trigger: GGAGGAGGTCCTACTCTCGTCCACAGACCCAGGCAAGGAACTGGAGAAACCAGAGGAGTCCGATTCCAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TCCCAGCTGTCTTCACCGGACTGGCCGCAGCATCAATaGGCGGCACTTTCTTCTCTTGTCCAGATGTCTCCC +
Preference number: 6 (lower is better)
Translates to: SQLSSPDWPQHQ*AALSSLVQMSP
Trigger: GGGAGACATCTGGACAAGAGAAGAAAGTGCCGCCAATTGATGCTGCGGCCAGTCCGGTGAAGACAGCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp ACAAACACCTTGAGTTCGTTGATGTCTTCCAGGGCCTaGTGCAGCCAGGCAACAAGCTCCGTCTGCCGGGCA +
Preference number: 6 (lower is better)
Translates to: TNTLSSLMSSRA*CSQATSSVCRA
Trigger: TGCCCGGCAGACGGAGCTTGTTGCCTGGCTGCACAAGGCCCTGGAAGACATCAACGAACTCAAGGTGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CAGATCCCCTCAGCACTCTCTATGAGCTCTTTCTCGTaGGGACTGCCGCGGGACACAAAGATGCCTCGGTTC +
Preference number: 6 (lower is better)
Translates to: QIPSALSMSSFS*GLPRDTKMPRF
Trigger: GAACCGAGGCATCTTTGTGTCCCGCGGCAGTCCCAACGAGAAAGAGCTCATAGAGAGTGCTGAGGGGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TTCCTGGGAAACACCCATTGGCATGGATGGCCCTGCTaGGAGAAGCTCTGCACGAATTCCATCCCACGCTGG +
Preference number: 6 (lower is better)
Translates to: FLGNTHWHGWPC*EKLCTNSIPRW
Trigger: CCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CTCCCCAACACGTGGCCAGTCTGCGTTCTGTCCTCATaGTTTCTGATAGCACTGAAGCCCTCATGCGGCGTG +
Preference number: 6 (lower is better)
Translates to: LPNTWPVCVLSS*FLIALKPSCGV
Trigger: CACGCCGCATGAGGGCTTCAGTGCTATCAGAAACAATGAGGACAGAACGCAGACTGGCCACGTGTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp ACAGTAGCTGCAGAAGGCAATTTCTGTCCGCACTCGCTACAGAACTaGGGTGCCTTCTCTGAGGAGACATGCCCGCACTGTGGACACTCC +
Preference number: 6 (lower is better)
Translates to: TVAAEGNFCPHSLQN*GAFSEETCPHCGHS
Trigger: GGAGTGTCCACAGTGCGGGCATGTCTCCTCAGAGAAGGCACCCAAGTTCTGTAGCGAGTGCGGACAGAAATTGCCTTCTGCAGCTACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp ATCAATGTGAGCTATCATGCTCGCCAGGATGGGAGTGACCACATCTaGGACCCGCTTCCAAAGGGTATGCCTGAAGGTGCCTGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: INVSYHARQDGSDHI*DPLPKGMPEGACLL
Trigger: CAGGAGGCAGGCACCTTCAGGCATACCCTTTGGAAGCGGGTCCAAGATGTGGTCACTCCCATCCTGGCGAGCATGATAGCTCACATTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp AGCTCCAGTGGCGTGGACAGATTCTTCACAAGCTGTAACCAAGCCTaGGGGCTTGGCTTCAGGAGGTCTCCCTTGAGCATTTCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: SSSGVDRFFTSCNQA*GLGFRRSPLSISAQ
Trigger: CTGCGCTGAAATGCTCAAGGGAGACCTCCTGAAGCCAAGCCCCAAGGCTTGGTTACAGCTTGTGAAGAATCTGTCCACGCCACTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TTGGGGCTTCTGCAGGCCATCAGAGCATTCCCAATGTCTAGGGTCTaGCACTCAAGCACAGCTTTGGCCGTTGCATCACGGACAGCCTTG +
Preference number: 6 (lower is better)
Translates to: LGLLQAIRAFPMSRV*HSSTALAVASRTAL
Trigger: CAAGGCTGTCCGTGATGCAACGGCCAAAGCTGTGCTTGAGTGCAAGACCCTAGACATTGGGAATGCTCTGATGGCCTGCAGAAGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp GACTGTGGGCTCCCCAACACGTGGCCAGTCTGCGTTCTGTCCTCATaGTTTCTGATAGCACTGAAGCCCTCATGCGGCGTGTGGTTAAGA +
Preference number: 6 (lower is better)
Translates to: DCGLPNTWPVCVLSS*FLIALKPSCGVWLR
Trigger: TCTTAACCACACGCCGCATGAGGGCTTCAGTGCTATCAGAAACAATGAGGACAGAACGCAGACTGGCCACGTGTTGGGGAGCCCACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TCTGCTTCCTTCTGGAGGAAGTGCCAGAGGACAGGCACCGTTTCCTaGCCGTTCTTCTGTTCCACGATGTGCTGCAGGTACTCCACTGTG +
Preference number: 6 (lower is better)
Translates to: SASFWRKCQRTGTVS*PFFCSTMCCRYSTV
Trigger: CACAGTGGAGTACCTGCAGCACATCGTGGAACAGAAGAACGGCAAGGAAACGGTGCCTGTCCTCTGGCACTTCCTCCAGAAGGAAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GGCCACCCGGTCCACATCAATGTCATTCTCTCCCGCTaGGATGGAGGCCAAGTCCACAAACACCTTGAGTTC +
Preference number: 6 (lower is better)
Translates to: GHPVHINVILSR*DGGQVHKHLEF
Trigger: GAACTCAAGGTGTTTGTGGACTTGGCCTCCATCTCAGCGGGAGAGAATGACATTGATGTGGACCGGGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GCCCCTGCTGTTGATTGCTGTGGCGAGGGACAGAGATaGGAGCTCCACAGATCCATGGCTTTCCTTCACTGT +
Preference number: 6 (lower is better)
Translates to: APAVDCCGEGQR*ELHRSMAFLHC
Trigger: ACAGTGAAGGAAAGCCATGGATCTGTGGAGCTCTCATCTCTGTCCCTCGCCACAGCAATCAACAGCAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp TTTCAGAGGTCACGATGCCAACACACAGCCCGTCTCTaGATACAGTTGCTGCTGACAGGAGCCGCTTCGGGA +
Preference number: 6 (lower is better)
Translates to: FQRSRCQHTARL*IQLLLTGAASG
Trigger: TCCCGAAGCGGCTCCTGTCAGCAGCAACTGTATTCAGAGACGGGCTGTGTGTTGGCATCGTGACCTCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp CCTGGGAGTGCTTCCGATATGGGTTGCAGGCAGCAATaGTATGCAGGCCAGAGTCCTCATGTAGGTGCTCAC +
Preference number: 6 (lower is better)
Translates to: PGSASDMGCRQQ*YAGQSPHVGAH
Trigger: GTGAGCACCTACATGAGGACTCTGGCCTGCATATCATTGCTGCCTGCAACCCATATCGGAAGCACTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GCGCGCTACGGGTGCCATCGTCAAAGTCTGCCTGGATaGCTAGGACTTTACGTTTGCCTGGGTTCGTTAACC +
Preference number: 6 (lower is better)
Translates to: ARYGCHRQSLPG*LGLYVCLGSLT
Trigger: GGTTAACGAACCCAGGCAAACGTAAAGTCCTAGTCATCCAGGCAGACTTTGACGATGGCACCCGTAGCGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp ATTCTGGAGAAGTTCTGTAGCCGGGTCCTGAAGTGCTaGAAGGCAAGGTGCACCCAGGGCAAGGAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: ILEKFCSRVLKC*KARCTQGKERG
Trigger: TCCTCTCTCCTTGCCCTGGGTGCACCTTGCCTTTCAGCACTTCAGGACCCGGCTACAGAACTTCTCCAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp CACACCCAGCCAAGCTGTGCTTCTCTGCTGCTTGACTaGGGCTGCTCAGAACCTGGGGGTGAATGGTCAAAA +
Preference number: 6 (lower is better)
Translates to: HTQPSCASLLLD*GCSEPGGEWSK
Trigger: TTTTGACCATTCACCCCCAGGTTCTGAGCAGCCTCAGTCAAGCAGCAGAGAAGCACAGCTTGGCTGGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp ACCAAGCCTTGGGGCTTGGCTTCAGGAGGTCTCCCTTaGGCATTTCAGCGCAGGCCATTGCTGCAAATGCAT +
Preference number: 6 (lower is better)
Translates to: TKPWGLASGGLP*AFQRRPLLQMH
Trigger: ATGCATTTGCAGCAATGGCCTGCGCTGAAATGCTCAAGGGAGACCTCCTGAAGCCAAGCCCCAAGGCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GGAGAAGCTCTGCACGAATTCCATCCCACGCTGGCTTaGGAGTTTCCTCACCAGGTACACCCTGTGCCAATC +
Preference number: 6 (lower is better)
Translates to: GEALHEFHPTLA*EFPHQVHPVPI
Trigger: GATTGGCACAGGGTGTACCTGGTGAGGAAACTCTCAAGCCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp TGGGGATTGTGGGTGGCTCCCACAAGCATAGCCAAGTaGGTGAGTAGCCGGGTGAGAATAAAGACCACTGGG +
Preference number: 6 (lower is better)
Translates to: WGLWVAPTSIAK*VSSRVRIKTTG
Trigger: CCCAGTGGTCTTTATTCTCACCCGGCTACTCACTCACTTGGCTATGCTTGTGGGAGCCACCCACAATCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GGGTCAGCCTGGGCTTGCCCTGTAGGAACCGGCTGCTaGTCTGCCGTTGGATCTTCTCTAGATCAAACTCTT +
Preference number: 6 (lower is better)
Translates to: GSAWACPVGTGC*SAVGSSLDQTL
Trigger: AAGAGTTTGATCTAGAGAAGATCCAACGGCAGATCAGCAGCCGGTTCCTACAGGGCAAGCCCAGGCTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS GCA 72 bp CAGGTCATGCAGGTCTTGGGTGCAGTACATCTCGCATaGATCAGTCCAGCCTTTCTGCCCAAGTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: QVMQVLGAVHLA*ISPAFLPKSFS
Trigger: GGAGAAGGACTTGGGCAGAAAGGCTGGACTGATGCATGCGAGATGTACTGCACCCAAGACCTGCATGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GGCTCTTGGAGTTCTTCTTGGGTGGAGACTTCTGCATaGAGGTGTGCAGGAGGGGTAAGATACCCAGCCAAC +
Preference number: 6 (lower is better)
Translates to: GSWSSSWVETSA*RCAGGVRYPAN
Trigger: GTTGGCTGGGTATCTTACCCCTCCTGCACACCTGCATGCAGAAGTCTCCACCCAAGAAGAACTCCAAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GCCAGTTTCTCGTGGTGGCCAGGGCCTCCTGAAGGGTaGTTGTCACCAAGTCTTCGTAAGATTTTTCGGGCA +
Preference number: 6 (lower is better)
Translates to: ASFSWWPGPPEG*LSPSLRKIFRA
Trigger: TGCCCGAAAAATCTTACGAAGACTTGGTGACAAGCACCCTTCAGGAGGCCCTGGCCACCACGAGAAACTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CTGCAGAAGAAGGAGATCTGCAAACGGGGAGGCTCCTaGTTGAGCCTCCCTTCCATGTCTCCCAGCAATGAT +
Preference number: 6 (lower is better)
Translates to: LQKKEICKRGGS*LSLPSMSPSND
Trigger: ATCATTGCTGGGAGACATGGAAGGGAGGCTCAAGCAGGAGCCTCCCCGTTTGCAGATCTCCTTCTTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AGGCAGCGAAAGAGCTCAGAGAAGGCAGCCTGCCCTTaGATGGCATCTGCCACAATGATCTTGGCAAGGGAT +
Preference number: 6 (lower is better)
Translates to: RQRKSSEKAACP*MASATMILARD
Trigger: ATCCCTTGCCAAGATCATTGTGGCAGATGCCATGCAAGGGCAGGCTGCCTTCTCTGAGCTCTTTCGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TCTCTGAGCATCCCCACAGCACCCTGCACACAGCTCTaGACCAGTCTGGTGGTATCTAGGAACTGTGAACAG +
Preference number: 6 (lower is better)
Translates to: SLSIPTAPCTQL*TSLVVSRNCEQ
Trigger: CTGTTCACAGTTCCTAGATACCACCAGACTGGTGCAGAGCTGTGTGCAGGGTGCTGTGGGGATGCTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp ACCCATTGGCATGGATGGCCCTGCTTGGAGAAGCTCTaGACGAATTCCATCCCACGCTGGCTTGAGAGTTTC +
Preference number: 6 (lower is better)
Translates to: THWHGWPCLEKL*TNSIPRWLESF
Trigger: GAAACTCTCAAGCCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CCACTGGACTGTGGGCTCCCCAACACGTGGCCAGTCTaGGTTCTGTCCTCATTGTTTCTGATAGCACTGAAG +
Preference number: 6 (lower is better)
Translates to: PLDCGLPNTWPV*VLSSLFLIALK
Trigger: CTTCAGTGCTATCAGAAACAATGAGGACAGAACGCAGACTGGCCACGTGTTGGGGAGCCCACAGTCCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GTGAGTAGCCGGGTGAGAATAAAGACCACTGGGGACTaGCCTCGGTCAGATACTTCTGCTACACCACTGGAC +
Preference number: 6 (lower is better)
Translates to: VSSRVRIKTTGD*PRSDTSATPLD
Trigger: GTCCAGTGGTGTAGCAGAAGTATCTGACCGAGGGCAGTCCCCAGTGGTCTTTATTCTCACCCGGCTACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AGCATCTTGGTTAGCTGCTCCAGGTCTCTCTGGATGTaGTGCTGTAGGAAGCCTTGTGGGTCCTGGACCCAA +
Preference number: 6 (lower is better)
Translates to: SILVSCSRSLWM*CCRKPCGSWTQ
Trigger: TTGGGTCCAGGACCCACAAGGCTTCCTACAGCAGCACATCCAGAGAGACCTGGAGCAGCTAACCAAGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TCTGGAGGAAGTGCCAGAGGACAGGCACCGTTTCCTTaGCGTTCTTCTGTTCCACGATGTGCTGCAGGTACT +
Preference number: 6 (lower is better)
Translates to: SGGSARGQAPFP*RSSVPRCAAGT
Trigger: AGTACCTGCAGCACATCGTGGAACAGAAGAACGGCAAGGAAACGGTGCCTGTCCTCTGGCACTTCCTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AATGGAGCCTTCTGGGAAGCATCAGTCATCTTAGGGTaGCCTTTGAACGCAGAAAGGGCTGGGCCCCCATCT +
Preference number: 6 (lower is better)
Translates to: NGAFWEASVILG*PLNAERAGPPS
Trigger: AGATGGGGGCCCAGCCCTTTCTGCGTTCAAAGGCCACCCTAAGATGACTGATGCTTCCCAGAAGGCTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GGTTTTCACAGCTGCTGCAAAGTTTCTGCCCTCTCCTaGCTTCCTCTGATCTTCTGGCTGGGTGTTGCCACC +
Preference number: 6 (lower is better)
Translates to: GFHSCCKVSALS*LPLIFWLGVAT
Trigger: GGTGGCAACACCCAGCCAGAAGATCAGAGGAAGCCAGGAGAGGGCAGAAACTTTGCAGCAGCTGTGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GTCATGAAACTCTGCAGGTTGATGTCACTCCAGGGCTaGAGCACGCTGAAGATGCGGTCCAGCATGACCACA +
Preference number: 6 (lower is better)
Translates to: VMKLCRLMSLQG*STLKMRSSMTT
Trigger: TGTGGTCATGCTGGACCGCATCTTCAGCGTGCTCCAGCCCTGGAGTGACATCAACCTGCAGAGTTTCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AGCAGGCAGAGACTCCCCACTCTTTCCTTCCAGGAATaGGGCCATCTGCTTTTTCACGTGCTCCCACAGGTT +
Preference number: 6 (lower is better)
Translates to: SRQRLPTLSFQE*GHLLFHVLPQV
Trigger: AACCTGTGGGAGCACGTGAAAAAGCAGATGGCCCCATTCCTGGAAGGAAAGAGTGGGGAGTCTCTGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GGTGCTCGAGGATCAGCTCCAGCTGTCCAACCACAATaGTGCCATTTTCAAGTTCCCCTGCGACCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: GARGSAPAVQPQ*CHFQVPLRPSG
Trigger: TCCAGAAGGTCGCAGGGGAACTTGAAAATGGCACCATTGTGGTTGGACAGCTGGAGCTGATCCTCGAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp ATGGCCATCAGGGAGGAGGAGGCGGAGAACAGTGTCTaGGGAAATCTTCTGGCCATCTTTGGGTGCCTCAAT +
Preference number: 6 (lower is better)
Translates to: MAIREEEAENSV*GNLLAIFGCLN
Trigger: ATTGAGGCACCCAAAGATGGCCAGAAGATTTCCCCAGACACTGTTCTCCGCCTCCTCCTCCCTGATGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AAGGCATCTACCCAGGGCATCCAGGTCCAGACAGTGTaGCAGGAAGGCACTCATGTACACGAGGGATTGCAT +
Preference number: 6 (lower is better)
Translates to: KASTQGIQVQTV*QEGTHVHEGLH
Trigger: ATGCAATCCCTCGTGTACATGAGTGCCTTCCTGCCACACTGTCTGGACCTGGATGCCCTGGGTAGATGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TGTGACCTCATCCAGGATGGCCCTGCTGCTATTGTATaGTTTGGGAAAGCACCTGGCGATGGCAGTGCGGTA +
Preference number: 6 (lower is better)
Translates to: CDLIQDGPAAIV*FGKAPGDGSAV
Trigger: TACCGCACTGCCATCGCCAGGTGCTTTCCCAAACCATACAATAGCAGCAGGGCCATCCTGGATGAGGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TGCTTGGAGAAGCTCTGCACGAATTCCATCCCACGCTaGCTTGAGAGTTTCCTCACCAGGTACACCCTGTGC +
Preference number: 6 (lower is better)
Translates to: CLEKLCTNSIPR*LESFLTRYTLC
Trigger: GCACAGGGTGTACCTGGTGAGGAAACTCTCAAGCCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GCCGTTGCATCACGGACAGCCTTGTATTCATTACCGTaGACGAGGTATCGGTCCATCAGGCTTACGTGGTCC +
Preference number: 6 (lower is better)
Translates to: AVASRTALYSLP*TRYRSIRLTWS
Trigger: GGACCACGTAAGCCTGATGGACCGATACCTCGTCCACGGTAATGAATACAAGGCTGTCCGTGATGCAACGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TGCATTGGCCTGCCACACTCTCCCACAGAGCATGGATaGCCTCTGGGACAAGTGTACCAGGTGACATTTTCC +
Preference number: 6 (lower is better)
Translates to: CIGLPHSPTEHG*PLGQVYQVTFS
Trigger: GGAAAATGTCACCTGGTACACTTGTCCCAGAGGCCATCCATGCTCTGTGGGAGAGTGTGGCAGGCCAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CTCTTGCATTGGCCTGCCACACTCTCCCACAGAGCATaGATGGCCTCTGGGACAAGTGTACCAGGTGACATT +
Preference number: 6 (lower is better)
Translates to: LLHWPATLSHRA*MASGTSVPGDI
Trigger: AATGTCACCTGGTACACTTGTCCCAGAGGCCATCCATGCTCTGTGGGAGAGTGTGGCAGGCCAATGCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AGCAGGGCCATCTTACTCTGCATGAACTGGAGGGGCTaGCTAGTGGGTGCTTTGTCCCGAAACTCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: SRAILLCMNWRG*LVGALSRNSEK
Trigger: CTTCTCAGAGTTTCGGGACAAAGCACCCACTAGCCAGCCCCTCCAGTTCATGCAGAGTAAGATGGCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131035.10
CDS CAA 72 bp AGTTTCTCGTGGTGGCCAGGGCCTCCTGAAGGGTGCTaGTCACCAAGTCTTCGTAAGATTTTTCGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SFSWWPGPPEGC*SPSLRKIFRAA
Trigger: GGCTGCCCGAAAAATCTTACGAAGACTTGGTGACAAGCACCCTTCAGGAGGCCCTGGCCACCACGAGAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TCTCCCGCTGAGATGGAGGCCAAGTCCACAAACACCTaGAGTTCGTTGATGTCTTCCAGGGCCTTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SPAEMEAKSTNT*SSLMSSRALCS
Trigger: GCTGCACAAGGCCCTGGAAGACATCAACGAACTCAAGGTGTTTGTGGACTTGGCCTCCATCTCAGCGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CGGAGGATCATCTCCTGGGAGTGCTTCCGATATGGGTaGCAGGCAGCAATGATATGCAGGCCAGAGTCCTCA +
Preference number: 6 (lower is better)
Translates to: RRIISWECFRYG*QAAMICRPESS
Trigger: TGAGGACTCTGGCCTGCATATCATTGCTGCCTGCAACCCATATCGGAAGCACTCCCAGGAGATGATCCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GGACTGCCGCGGGACACAAAGATGCCTCGGTTCATCTaGGCAGGATCTAGAGCCCAGTTGGAAATGCCAACA +
Preference number: 6 (lower is better)
Translates to: GLPRDTKMPRFI*AGSRAQLEMPT
Trigger: TGTTGGCATTTCCAACTGGGCTCTAGATCCTGCCAAGATGAACCGAGGCATCTTTGTGTCCCGCGGCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TTCTGCTTGATCAGCTCCACGGTGCTGACTTCCTCCTaGTACCTGGCCTCCGGGAGACTGGCTGTAAAGATG +
Preference number: 6 (lower is better)
Translates to: FCLISSTVLTSS*YLASGRLAVKM
Trigger: CATCTTTACAGCCAGTCTCCCGGAGGCCAGGTACAAGGAGGAAGTCAGCACCGTGGAGCTGATCAAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp AACCAAGCCTTGGGGCTTGGCTTCAGGAGGTCTCCCTaGAGCATTTCAGCGCAGGCCATTGCTGCAAATGCA +
Preference number: 6 (lower is better)
Translates to: NQALGLGFRRSP*SISAQAIAANA
Trigger: TGCATTTGCAGCAATGGCCTGCGCTGAAATGCTCAAGGGAGACCTCCTGAAGCCAAGCCCCAAGGCTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CACCTGCTGTGCAATGACTTTCCTGGGAAACACCCATaGGCATGGATGGCCCTGCTTGGAGAAGCTCTGCAC +
Preference number: 6 (lower is better)
Translates to: HLLCNDFPGKHP*AWMALLGEALH
Trigger: GTGCAGAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGCACAGCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CTGCAGGCCATCAGAGCATTCCCAATGTCTAGGGTCTaGCACTCAAGCACAGCTTTGGCCGTTGCATCACGG +
Preference number: 6 (lower is better)
Translates to: LQAIRAFPMSRV*HSSTALAVASR
Trigger: CCGTGATGCAACGGCCAAAGCTGTGCTTGAGTGCAAGACCCTAGACATTGGGAATGCTCTGATGGCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GCCTCCAATTGCTTTGCTTCTGGATGGAGGCTGCCATaGGGGGAACGGTACAAAGCAGCCACCTCTGTGTAC +
Preference number: 6 (lower is better)
Translates to: ASNCFASGWRLP*GERYKAATSVY
Trigger: GTACACAGAGGTGGCTGCTTTGTACCGTTCCCCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TTCTGGAGGAAGTGCCAGAGGACAGGCACCGTTTCCTaGCCGTTCTTCTGTTCCACGATGTGCTGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: FWRKCQRTGTVS*PFFCSTMCCRY
Trigger: GTACCTGCAGCACATCGTGGAACAGAAGAACGGCAAGGAAACGGTGCCTGTCCTCTGGCACTTCCTCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GAGGTTTCCCCACCTTGCTGCACTTGGTACTGGCAGTaGGAGAGGATCAGTGGATTCAGATCCCGTTCCACC +
Preference number: 6 (lower is better)
Translates to: EVSPPCCTWYWQ*ERISGFRSRST
Trigger: GGTGGAACGGGATCTGAATCCACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGGGGAAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CAA 90 bp GACCTGTTTCAGGCAGCGAAAGAGCTCAGAGAAGGCAGCCTGCCCTaGCATGGCATCTGCCACAATGATCTTGGCAAGGGATTTGGAGCT +
Preference number: 6 (lower is better)
Translates to: DLFQAAKELREGSLP*HGICHNDLGKGFGA
Trigger: AGCTCCAAATCCCTTGCCAAGATCATTGTGGCAGATGCCATGCAAGGGCAGGCTGCCTTCTCTGAGCTCTTTCGCTGCCTGAAACAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TCTGAAGAGCAGATCCCCTCAGCACTCTCTATGAGCTCTTTCTCGTaGGGACTGCCGCGGGACACAAAGATGCCTCGGTTCATCTTGGCA +
Preference number: 6 (lower is better)
Translates to: SEEQIPSALSMSSFS*GLPRDTKMPRFILA
Trigger: TGCCAAGATGAACCGAGGCATCTTTGTGTCCCGCGGCAGTCCCAACGAGAAAGAGCTCATAGAGAGTGCTGAGGGGATCTGCTCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CTGGCCTCCGGGAGACTGGCTGTAAAGATGCTCAGGGCCTGGATGTaGTCTTTACCACTGAAGTTCCTGAGGACAGCATGCGTGATGTCT +
Preference number: 6 (lower is better)
Translates to: LASGRLAVKMLRAWM*SLPLKFLRTACVMS
Trigger: AGACATCACGCATGCTGTCCTCAGGAACTTCAGTGGTAAAGACAACATCCAGGCCCTGAGCATCTTTACAGCCAGTCTCCCGGAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CATGGTCAAGAGCAGGAAGTCCTTCAAGTAGCTCTGCAGGAGTTTTaGCTGCTGTGCCACAGGGAACTGAGCGAGAAACACGCCCAAGGG +
Preference number: 6 (lower is better)
Translates to: HGQEQEVLQVALQEF*LLCHRELSEKHAQG
Trigger: CCCTTGGGCGTGTTTCTCGCTCAGTTCCCTGTGGCACAGCAGCAAAAACTCCTGCAGAGCTACTTGAAGGACTTCCTGCTCTTGACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp ACAAGCTGTAACCAAGCCTTGGGGCTTGGCTTCAGGAGGTCTCCCTaGAGCATTTCAGCGCAGGCCATTGCTGCAAATGCATCCAGTGTC +
Preference number: 6 (lower is better)
Translates to: TSCNQALGLGFRRSP*SISAQAIAANASSV
Trigger: GACACTGGATGCATTTGCAGCAATGGCCTGCGCTGAAATGCTCAAGGGAGACCTCCTGAAGCCAAGCCCCAAGGCTTGGTTACAGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TGGCTTGAGAGTTTCCTCACCAGGTACACCCTGTGCCAATCATTGTaGACGCGTGTGCAGAACTCCTCAACATGCTTCAGGAAGCGCCGC +
Preference number: 6 (lower is better)
Translates to: WLESFLTRYTLCQSL*TRVQNSSTCFRKRR
Trigger: GCGGCGCTTCCTGAAGCATGTTGAGGAGTTCTGCACACGCGTCAACAATGATTGGCACAGGGTGTACCTGGTGAGGAAACTCTCAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CGCTGGCTTGAGAGTTTCCTCACCAGGTACACCCTGTGCCAATCATaGTTGACGCGTGTGCAGAACTCCTCAACATGCTTCAGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: RWLESFLTRYTLCQS*LTRVQNSSTCFRKR
Trigger: GCGCTTCCTGAAGCATGTTGAGGAGTTCTGCACACGCGTCAACAATGATTGGCACAGGGTGTACCTGGTGAGGAAACTCTCAAGCCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp GCAATGACTTTCCTGGGAAACACCCATTGGCATGGATGGCCCTGCTaGGAGAAGCTCTGCACGAATTCCATCCCACGCTGGCTTGAGAGT +
Preference number: 6 (lower is better)
Translates to: AMTFLGNTHWHGWPC*EKLCTNSIPRWLES
Trigger: ACTCTCAAGCCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TTGTTCACTGCCTCCAATTGCTTTGCTTCTGGATGGAGGCTGCCATaGGGGGAACGGTACAAAGCAGCCACCTCTGTGTACAAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LFTASNCFASGWRLP*GERYKAATSVYKAS
Trigger: GCTGGCCTTGTACACAGAGGTGGCTGCTTTGTACCGTTCCCCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp CTCGAAACACTGTCATGGAGTCCTCCGTCACGACACTaGCTGCTGCAGAAGAAGGAGATCTGCAAACGGGGA +
Preference number: 6 (lower is better)
Translates to: LETLSWSPPSRH*LLQKKEICKRG
Trigger: TCCCCGTTTGCAGATCTCCTTCTTCTGCAGCAGTCAGTGTCGTGACGGAGGACTCCATGACAGTGTTTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp AAAGTGGTGATCTCTGTGAAGACAGCCCGGCATTCATaGTGGGTCATGCGCAGGTGGGCCTGGAGGAAATCT +
Preference number: 6 (lower is better)
Translates to: KVVISVKTARHS*WVMRRWAWRKS
Trigger: AGATTTCCTCCAGGCCCACCTGCGCATGACCCATCATGAATGCCGGGCTGTCTTCACAGAGATCACCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp TGGGCCAGTAGCTCCAGGTTGCCATCTCTATCAATGTaGGCTATCATGCTCGCCAGGATGGGAGTGACCACA +
Preference number: 6 (lower is better)
Translates to: WASSSRLPSLSM*AIMLARMGVTT
Trigger: TGTGGTCACTCCCATCCTGGCGAGCATGATAGCTCACATTGATAGAGATGGCAACCTGGAGCTACTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GAGTTCTTCTTGGGTGGAGACTTCTGCATGCAGGTGTaGAGGAGGGGTAAGATACCCAGCCAACGGTCACAT +
Preference number: 6 (lower is better)
Translates to: EFFLGGDFCMQV*RRGKIPSQRSH
Trigger: ATGTGACCGTTGGCTGGGTATCTTACCCCTCCTGCACACCTGCATGCAGAAGTCTCCACCCAAGAAGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GCTCGAGGATCAGCTCCAGCTGTCCAACCACAATGGTaGCATTTTCAAGTTCCCCTGCGACCTTCTGGAACA +
Preference number: 6 (lower is better)
Translates to: ARGSAPAVQPQW*HFQVPLRPSGT
Trigger: TGTTCCAGAAGGTCGCAGGGGAACTTGAAAATGGCACCATTGTGGTTGGACAGCTGGAGCTGATCCTCGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GAGTGCTTCCGATATGGGTTGCAGGCAGCAATGATATaGAGGCCAGAGTCCTCATGTAGGTGCTCACCATCC +
Preference number: 6 (lower is better)
Translates to: ECFRYGLQAAMI*RPESSCRCSPS
Trigger: GGATGGTGAGCACCTACATGAGGACTCTGGCCTGCATATCATTGCTGCCTGCAACCCATATCGGAAGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TGCTTCTCCAGACGGTTGATGAGGGGCACAGGGAACTaGTTGTACACCACATCCTTCTCCTCGATGACGATG +
Preference number: 6 (lower is better)
Translates to: CFSRRLMRGTGN*LYTTSFSSMTM
Trigger: CATCGTCATCGAGGAGAAGGATGTGGTGTACAAGCAGTTCCCTGTGCCCCTCATCAACCGTCTGGAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AGGCCGGTGAATCTGGTTGGGCCAGTAGCTCCAGGTTaGCATCTCTATCAATGTGAGCTATCATGCTCGCCA +
Preference number: 6 (lower is better)
Translates to: RPVNLVGPVAPG*HLYQCELSCSP
Trigger: TGGCGAGCATGATAGCTCACATTGATAGAGATGGCAACCTGGAGCTACTGGCCCAACCAGATTCACCGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TGTCATTTCACACCCAGCCAAGCTGTGCTTCTCTGCTaGTTGACTGAGGCTGCTCAGAACCTGGGGGTGAAT +
Preference number: 6 (lower is better)
Translates to: CHFTPSQAVLLC*LTEAAQNLGVN
Trigger: ATTCACCCCCAGGTTCTGAGCAGCCTCAGTCAAGCAGCAGAGAAGCACAGCTTGGCTGGGTGTGAAATGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CAGGAGGTCTCCCTTGAGCATTTCAGCGCAGGCCATTaGTGCAAATGCATCCAGTGTCATTTCACACCCAGC +
Preference number: 6 (lower is better)
Translates to: QEVSLEHFSAGH*CKCIQCHFTPS
Trigger: GCTGGGTGTGAAATGACACTGGATGCATTTGCAGCAATGGCCTGCGCTGAAATGCTCAAGGGAGACCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CGCTGGCTTGAGAGTTTCCTCACCAGGTACACCCTGTaGCAATCATTGTTGACGCGTGTGCAGAACTCCTCA +
Preference number: 6 (lower is better)
Translates to: RWLESFLTRYTL*QSLLTRVQNSS
Trigger: TGAGGAGTTCTGCACACGCGTCAACAATGATTGGCACAGGGTGTACCTGGTGAGGAAACTCTCAAGCCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CAGGCTTACGTGGTCCTTCCTGTTCCTCACCTGCTGTaGAATGACTTTCCTGGGAAACACCCATTGGCATGG +
Preference number: 6 (lower is better)
Translates to: QAYVVLPVPHLL*NDFPGKHPLAW
Trigger: CCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGCACAGCAGGTGAGGAACAGGAAGGACCACGTAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TGCAGGCCATCAGAGCATTCCCAATGTCTAGGGTCTTaGACTCAAGCACAGCTTTGGCCGTTGCATCACGGA +
Preference number: 6 (lower is better)
Translates to: CRPSEHSQCLGS*TQAQLWPLHHG
Trigger: TCCGTGATGCAACGGCCAAAGCTGTGCTTGAGTGCAAGACCCTAGACATTGGGAATGCTCTGATGGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GGCACCGTTTCCTTGCCGTTCTTCTGTTCCACGATGTaGTGCAGGTACTCCACTGTGATTTTCCTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: GTVSLPFFCSTM*CRYSTVIFLLQ
Trigger: CTGCAGGAGGAAAATCACAGTGGAGTACCTGCAGCACATCGTGGAACAGAAGAACGGCAAGGAAACGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AGCCTGGGCTTGCCCTGTAGGAACCGGCTGCTGATCTaGCGTTGGATCTTCTCTAGATCAAACTCTTGTGAG +
Preference number: 6 (lower is better)
Translates to: SLGLPCRNRLLI*RWIFSRSNSCE
Trigger: CTCACAAGAGTTTGATCTAGAGAAGATCCAACGGCAGATCAGCAGCCGGTTCCTACAGGGCAAGCCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CCA 72 bp ACAATGGTGCCATTTTCAAGTTCCCCTGCGACCTTCTaGAACACAGACTCAGCAGTGGCCATCAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: TMVPFSSSPATF*NTDSAVAISCL
Trigger: CAGGCAGCTGATGGCCACTGCTGAGTCTGTGTTCCAGAAGGTCGCAGGGGAACTTGAAAATGGCACCATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AGCTTGCCCATTAGGCTGGGCTCAGAAAGCAGCTGCTaGGGCAACTTTTTCATAACCTCCCGCAGGCAGTAT +
Preference number: 6 (lower is better)
Translates to: SLPIRLGSESSC*GNFFITSRRQY
Trigger: ATACTGCCTGCGGGAGGTTATGAAAAAGTTGCCCCAGCAGCTGCTTTCTGAGCCCAGCCTAATGGGCAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp ACCACTGAGACATACTGCCCCAGGTCCTTACCCTGCTaGAATCGAGCGCACTGCTTGAAGGTGCTGATGATA +
Preference number: 6 (lower is better)
Translates to: TTETYCPRSLPC*NRAHCLKVLMI
Trigger: TATCATCAGCACCTTCAAGCAGTGCGCTCGATTCCAGCAGGGTAAGGACCTGGGGCAGTATGTCTCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GCCTCCGGGAGACTGGCTGTAAAGATGCTCAGGGCCTaGATGTTGTCTTTACCACTGAAGTTCCTGAGGACA +
Preference number: 6 (lower is better)
Translates to: ASGRLAVKMLRA*MLSLPLKFLRT
Trigger: TGTCCTCAGGAACTTCAGTGGTAAAGACAACATCCAGGCCCTGAGCATCTTTACAGCCAGTCTCCCGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp ACAAGTACCCTTCGGAGCAGACGAGCTCCAGTGGCGTaGACAGATTCTTCACAAGCTGTAACCAAGCCTTGG +
Preference number: 6 (lower is better)
Translates to: TSTLRSRRAPVA*TDSSQAVTKPW
Trigger: CCAAGGCTTGGTTACAGCTTGTGAAGAATCTGTCCACGCCACTGGAGCTCGTCTGCTCCGAAGGGTACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TGTTGCACATGTGCCGGAACTGGGCGTGCTTCTCAATaGCTTTCCTGTGGTCCTGGGAAACAGTTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: CCTCAGTGRASQ*LSCGPGKQLVR
Trigger: TCTCACCAACTGTTTCCCAGGACCACAGGAAAGCCATTGAGAAGCACGCCCAGTTCCGGCACATGTGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp ACCTGCTCGAGATTTCTGCAGCCAGCACTTGTCTTCTaGTGTACTGAGTCCTCCAGGCAGCTGATGAAGAGC +
Preference number: 6 (lower is better)
Translates to: TCSRFLQPALVF*CTESSRQLMKS
Trigger: GCTCTTCATCAGCTGCCTGGAGGACTCAGTACACCAGAAGACAAGTGCTGGCTGCAGAAATCTCGAGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TTACCGTGGACGAGGTATCGGTCCATCAGGCTTACGTaGTCCTTCCTGTTCCTCACCTGCTGTGCAATGACT +
Preference number: 6 (lower is better)
Translates to: LPWTRYRSIRLT*SFLFLTCCAMT
Trigger: AGTCATTGCACAGCAGGTGAGGAACAGGAAGGACCACGTAAGCCTGATGGACCGATACCTCGTCCACGGTAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CCTCCAATTGCTTTGCTTCTGGATGGAGGCTGCCATTaGGGGAACGGTACAAAGCAGCCACCTCTGTGTACA +
Preference number: 6 (lower is better)
Translates to: PPIALLLDGGCH*GNGTKQPPLCT
Trigger: TGTACACAGAGGTGGCTGCTTTGTACCGTTCCCCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TCTGCTACACCACTGGACTGTGGGCTCCCCAACACGTaGCCAGTCTGCGTTCTGTCCTCATTGTTTCTGATA +
Preference number: 6 (lower is better)
Translates to: SATPLDCGLPNT*PVCVLSSLFLI
Trigger: TATCAGAAACAATGAGGACAGAACGCAGACTGGCCACGTGTTGGGGAGCCCACAGTCCAGTGGTGTAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AGGTTTCCCCACCTTGCTGCACTTGGTACTGGCAGTTaGAGAGGATCAGTGGATTCAGATCCCGTTCCACCT +
Preference number: 6 (lower is better)
Translates to: RFPHLAALGTGS*RGSVDSDPVPP
Trigger: AGGTGGAACGGGATCTGAATCCACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGGGGAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CAA 72 bp ACATGTGTGACCTCATCCAGGATGGCCCTGCTGCTATaGTATGGTTTGGGAAAGCACCTGGCGATGGCAGTG +
Preference number: 6 (lower is better)
Translates to: TCVTSSRMALLL*YGLGKHLAMAV
Trigger: CACTGCCATCGCCAGGTGCTTTCCCAAACCATACAATAGCAGCAGGGCCATCCTGGATGAGGTCACACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TTCTCCAGACGGTTGATGAGGGGCACAGGGAACTGCTaGTACACCACATCCTTCTCCTCGATGACGATGAGG +
Preference number: 6 (lower is better)
Translates to: FSRRLMRGTGNC*YTTSFSSMTMR
Trigger: CCTCATCGTCATCGAGGAGAAGGATGTGGTGTACAAGCAGTTCCCTGTGCCCCTCATCAACCGTCTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GGCGTGGACAGATTCTTCACAAGCTGTAACCAAGCCTaGGGGCTTGGCTTCAGGAGGTCTCCCTTGAGCATT +
Preference number: 6 (lower is better)
Translates to: GVDRFFTSCNQA*GLGFRRSPLSI
Trigger: AATGCTCAAGGGAGACCTCCTGAAGCCAAGCCCCAAGGCTTGGTTACAGCTTGTGAAGAATCTGTCCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TGGAGAAGCTCTGCACGAATTCCATCCCACGCTGGCTaGAGAGTTTCCTCACCAGGTACACCCTGTGCCAAT +
Preference number: 6 (lower is better)
Translates to: WRSSARIPSHAG*RVSSPGTPCAN
Trigger: ATTGGCACAGGGTGTACCTGGTGAGGAAACTCTCAAGCCAGCGTGGGATGGAATTCGTGCAGAGCTTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TTGCCACCTTCATTACTTTTCCTAACAGGGGTGGCCAACTTGCCTTaGAGTTCAGCTTCCTGGTCTCCGTGCTTGGAGGCTACAGGGCTC +
Preference number: 6 (lower is better)
Translates to: LPPSLLFLTGVANLP*SSASWSPCLEATGL
Trigger: GAGCCCTGTAGCCTCCAAGCACGGAGACCAGGAAGCTGAACTCAAAGGCAAGTTGGCCACCCCTGTTAGGAAAAGTAATGAAGGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CTTGGTTATCACGGCAGACAAGAGGGTTCCAAATTTCTGCAAGTCTaGACAGGAGAGCCCCTCAAGCACACTGGTCTGAGACTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: LGYHGRQEGSKFLQV*TGEPLKHTGLRLAG
Trigger: GCCTGCCAGTCTCAGACCAGTGTGCTTGAGGGGCTCTCCTGTCAAGACTTGCAGAAATTTGGAACCCTCTTGTCTGCCGTGATAACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CTTCCGAGCTGCCTCAGGAGGCTCTCCACGTATCTCTTCTCTTGCTaGAGGAACAGCAGATCATCCCTTCTCCTTTTCAGCAAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: LPSCLRRLSTYLFSC*RNSRSSLLLFSKLL
Trigger: GAGGAGCTTGCTGAAAAGGAGAAGGGATGATCTGCTGTTCCTCAAGCAAGAGAAGAGATACGTGGAGAGCCTCCTGAGGCAGCTCGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp GTCAGCTCCATGTCTATCACTTCCTTGGGAGGACGGCAGGTGACTTaGGGGAAGAGATCAAGAAACTTGAACAGGGGTGCACGTGCGTTC +
Preference number: 6 (lower is better)
Translates to: VSSMSITSLGGRQVT*GKRSRNLNRGARAF
Trigger: GAACGCACGTGCACCCCTGTTCAAGTTTCTTGATCTCTTCCCCAAAGTCACCTGCCGTCCTCCCAAGGAAGTGATAGACATGGAGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TTCTCGTTGGGACTGCCGCGGGACACAAAGATGCCTCGGTTCATCTaGGCAGGATCTAGAGCCCAGTTGGAAATGCCAACAAAGCCAACT +
Preference number: 6 (lower is better)
Translates to: FSLGLPRDTKMPRFI*AGSRAQLEMPTKPT
Trigger: AGTTGGCTTTGTTGGCATTTCCAACTGGGCTCTAGATCCTGCCAAGATGAACCGAGGCATCTTTGTGTCCCGCGGCAGTCCCAACGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CCTGTTCCTCACCTGCTGTGCAATGACTTTCCTGGGAAACACCCATaGGCATGGATGGCCCTGCTTGGAGAAGCTCTGCACGAATTCCAT +
Preference number: 6 (lower is better)
Translates to: PVPHLLCNDFPGKHP*AWMALLGEALHEFH
Trigger: ATGGAATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGCACAGCAGGTGAGGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp GTCTTGCACTCAAGCACAGCTTTGGCCGTTGCATCACGGACAGCCTaGTATTCATTACCGTGGACGAGGTATCGGTCCATCAGGCTTACG +
Preference number: 6 (lower is better)
Translates to: VLHSSTALAVASRTA*YSLPWTRYRSIRLT
Trigger: CGTAAGCCTGATGGACCGATACCTCGTCCACGGTAATGAATACAAGGCTGTCCGTGATGCAACGGCCAAAGCTGTGCTTGAGTGCAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TCCTCAGGGGCTTCAAAATTTGGTTGTGTCCACAGAGGAGGATGGTaGCCACATGGACGGCCATTTCAGTCACCGTTCCCTTCAGGATGC +
Preference number: 6 (lower is better)
Translates to: SSGASKFGCVHRGGW*PHGRPFQSPFPSGC
Trigger: GCATCCTGAAGGGAACGGTGACTGAAATGGCCGTCCATGTGGCAACCATCCTCCTCTGTGGACACAACCAAATTTTGAAGCCCCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp TATCAATGTGAGCTATCATGCTCGCCAGGATGGGAGTaGCCACATCTTGGACCCGCTTCCAAAGGGTATGCC +
Preference number: 6 (lower is better)
Translates to: YQCELSCSPGWE*PHLGPASKGYA
Trigger: GGCATACCCTTTGGAAGCGGGTCCAAGATGTGGTCACTCCCATCCTGGCGAGCATGATAGCTCACATTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GGGTCCTGCGCATCTCCATGGCAGATGAAACATGGCTaGATACCAAACCTGCTGAACTTCTTGCTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: GSCASPWQMKHG*IPNLLNFLLAL
Trigger: CAAGGCCAGCAAGAAGTTCAGCAGGTTTGGTATTCAGCCATGTTTCATCTGCCATGGAGATGCGCAGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp TTACGTGGTCCTTCCTGTTCCTCACCTGCTGTGCAATaGCTTTCCTGGGAAACACCCATTGGCATGGATGGC +
Preference number: 6 (lower is better)
Translates to: LRGPSCSSPAVQ*LSWETPIGMDG
Trigger: GCCATCCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGCACAGCAGGTGAGGAACAGGAAGGACCACGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GTGCAGTACATCTCGCATGCATCAGTCCAGCCTTTCTaGCCAAGTCCTTCTCCGCCTCTGACATACACTTTG +
Preference number: 6 (lower is better)
Translates to: VQYISHASVQPF*PSPSPPLTYTL
Trigger: CAAAGTGTATGTCAGAGGCGGAGAAGGACTTGGGCAGAAAGGCTGGACTGATGCATGCGAGATGTACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp ATCTTCCTTAGCCCTGGAAGACGGTATGAAATCCCTTaGAAACAGTCCAGGACCCTCACGGGCACATCACTC +
Preference number: 6 (lower is better)
Translates to: IFLSPGRRYEIP*KQSRTLTGTSL
Trigger: GAGTGATGTGCCCGTGAGGGTCCTGGACTGTTTGCAAGGGATTTCATACCGTCTTCCAGGGCTAAGGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CTGTCCAACCACAATGGTGCCATTTTCAAGTTCCCCTaGGACCTTCTGGAACACAGACTCAGCAGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: LSNHNGAIFKFP*DLLEHRLSSGH
Trigger: ATGGCCACTGCTGAGTCTGTGTTCCAGAAGGTCGCAGGGGAACTTGAAAATGGCACCATTGTGGTTGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CCTGGAAGATATGGCTGTCTTTCAGGGAGTCTAGCTTaGTTGCCATTTCTCGGATGTCAGGGCTCAGGCAGT +
Preference number: 6 (lower is better)
Translates to: PGRYGCLSGSLA*LPFLGCQGSGS
Trigger: ACTGCCTGAGCCCTGACATCCGAGAAATGGCAAGCAAGCTAGACTCCCTGAAAGACAGCCATATCTTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GCAGTCCAAGTCCTGAACAGCATGTTGCCCGCGCAGTaGAGTTTTATGAAGACATGTACAAGCCGCTGCATG +
Preference number: 6 (lower is better)
Translates to: AVQVLNSMLPAQ*SFMKTCTSRCM
Trigger: CATGCAGCGGCTTGTACATGTCTTCATAAAACTGCACTGCGCGGGCAACATGCTGTTCAGGACTTGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TCCCTTGAGCATTTCAGCGCAGGCCATTGCTGCAAATaGATCCAGTGTCATTTCACACCCAGCCAAGCTGTG +
Preference number: 6 (lower is better)
Translates to: SLEHFSAGHCCK*IQCHFTPSQAV
Trigger: CACAGCTTGGCTGGGTGTGAAATGACACTGGATGCATTTGCAGCAATGGCCTGCGCTGAAATGCTCAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GAGGTCTCCCTTGAGCATTTCAGCGCAGGCCATTGCTaGAAATGCATCCAGTGTCATTTCACACCCAGCCAA +
Preference number: 6 (lower is better)
Translates to: EVSLEHFSAGHC*KCIQCHFTPSQ
Trigger: TTGGCTGGGTGTGAAATGACACTGGATGCATTTGCAGCAATGGCCTGCGCTGAAATGCTCAAGGGAGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CTGTCCTCATTGTTTCTGATAGCACTGAAGCCCTCATaGGGCGTGTGGTTAAGACCTCCGACTGGAAGACCA +
Preference number: 6 (lower is better)
Translates to: LSSLFLIALKPS*GVWLRPPTGRP
Trigger: TGGTCTTCCAGTCGGAGGTCTTAACCACACGCCGCATGAGGGCTTCAGTGCTATCAGAAACAATGAGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GACAATTCTGCATTAAAATTTAACACCCCGTGGCTCTaGACCCTGAGCAGGCTGCTCAGGATGAGGTGGACC +
Preference number: 6 (lower is better)
Translates to: DNSALKFNTPWL*TLSRLLRMRWT
Trigger: GGTCCACCTCATCCTGAGCAGCCTGCTCAGGGTGCAGAGCCACGGGGTGTTAAATTTTAATGCAGAATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp ACCGTTTCCTTGCCGTTCTTCTGTTCCACGATGTGCTaGAGGTACTCCACTGTGATTTTCCTCCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: TVSLPFFCSTMC*RYSTVIFLLQL
Trigger: GAGCTGCAGGAGGAAAATCACAGTGGAGTACCTGCAGCACATCGTGGAACAGAAGAACGGCAAGGAAACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TCCGTAGGACTTCTTCGATGTACACATTCAAGTCCATaGCAGGATCCCCACCAGCTGTGCTCAGGAAACCCA +
Preference number: 6 (lower is better)
Translates to: SVGLLRCTHSSP*QDPHQLCSGNP
Trigger: TGGGTTTCCTGAGCACAGCTGGTGGGGATCCTGGCATGGACTTGAATGTGTACATCGAAGAAGTCCTACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CCA 72 bp TGGCCCTGCTGCTATTGTATGGTTTGGGAAAGCACCTaGCGATGGCAGTGCGGTAGGATGCTTTCTCTTCTA +
Preference number: 6 (lower is better)
Translates to: WPCCYCMVWEST*RWQCGRMLSLL
Trigger: TAGAAGAGAAAGCATCCTACCGCACTGCCATCGCCAGGTGCTTTCCCAAACCATACAATAGCAGCAGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CTGTGCAATGACTTTCCTGGGAAACACCCATTGGCATaGATGGCCCTGCTTGGAGAAGCTCTGCACGAATTC +
Preference number: 6 (lower is better)
Translates to: LCNDFPGKHPLA*MALLGEALHEF
Trigger: GAATTCGTGCAGAGCTTCTCCAAGCAGGGCCATCCATGCCAATGGGTGTTTCCCAGGAAAGTCATTGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GGCAGGAATTTCACCAACCTTAGTTCTGCTTCCTTCTaGAGGAAGTGCCAGAGGACAGGCACCGTTTCCTTG +
Preference number: 6 (lower is better)
Translates to: GRNFTNLSSASF*RKCQRTGTVSL
Trigger: CAAGGAAACGGTGCCTGTCCTCTGGCACTTCCTCCAGAAGGAAGCAGAACTAAGGTTGGTGAAATTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TCTTGTGAGGTTTCCCCACCTTGCTGCACTTGGTACTaGCAGTTGGAGAGGATCAGTGGATTCAGATCCCGT +
Preference number: 6 (lower is better)
Translates to: SCEVSPPCCTWY*QLERISGFRSR
Trigger: ACGGGATCTGAATCCACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGGGGAAACCTCACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CCA 72 bp GGCTTGCCCTGTAGGAACCGGCTGCTGATCTGCCGTTaGATCTTCTCTAGATCAAACTCTTGTGAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: GLPCRNRLLICR*IFSRSNSCEVS
Trigger: GGAAACCTCACAAGAGTTTGATCTAGAGAAGATCCAACGGCAGATCAGCAGCCGGTTCCTACAGGGCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CAA 72 bp CACGGCAGACAAGAGGGTTCCAAATTTCTGCAAGTCTaGACAGGAGAGCCCCTCAAGCACACTGGTCTGAGA +
Preference number: 6 (lower is better)
Translates to: HGRQEGSKFLQV*TGEPLKHTGLR
Trigger: TCTCAGACCAGTGTGCTTGAGGGGCTCTCCTGTCAAGACTTGCAGAAATTTGGAACCCTCTTGTCTGCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TCCTGGAAGATATGGCTGTCTTTCAGGGAGTCTAGCTaGCTTGCCATTTCTCGGATGTCAGGGCTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SWKIWLSFRESS*LAISRMSGLRQ
Trigger: CTGCCTGAGCCCTGACATCCGAGAAATGGCAAGCAAGCTAGACTCCCTGAAAGACAGCCATATCTTCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CCCTGTGTTTTGTTGATTTCATTGATGGCAGTATACTaGGCAGAGGCTACGAGCTGCGCGCTACGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: PCVLLISLMAVY*AEATSCALRVP
Trigger: TGGCACCCGTAGCGCGCAGCTCGTAGCCTCTGCCAAGTATACTGCCATCAATGAAATCAACAAAACACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TCAAGCACAGCTTTGGCCGTTGCATCACGGACAGCCTaGTATTCATTACCGTGGACGAGGTATCGGTCCATC +
Preference number: 6 (lower is better)
Translates to: SSTALAVASRTA*YSLPWTRYRSI
Trigger: GATGGACCGATACCTCGTCCACGGTAATGAATACAAGGCTGTCCGTGATGCAACGGCCAAAGCTGTGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CTCCTCCTCTTCTCCTTTTTACTCATTTGGGTGGTCCAGGAGGCATaGGAATCGGACTCCTCTGGTTTCTCCAGTTCCTTGCCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: LLLFSFLLIWVVQEA*ESDSSGFSSSLPGS
Trigger: AGACCCAGGCAAGGAACTGGAGAAACCAGAGGAGTCCGATTCCAATGCCTCCTGGACCACCCAAATGAGTAAAAAGGAGAAGAGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TGGGTGTTGCCACCTTCATTACTTTTCCTAACAGGGGTGGCCAACTaGCCTTTGAGTTCAGCTTCCTGGTCTCCGTGCTTGGAGGCTACA +
Preference number: 6 (lower is better)
Translates to: WVLPPSLLFLTGVAN*PLSSASWSPCLEAT
Trigger: TGTAGCCTCCAAGCACGGAGACCAGGAAGCTGAACTCAAAGGCAAGTTGGCCACCCCTGTTAGGAAAAGTAATGAAGGTGGCAACACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TCCTTGGGAGGACGGCAGGTGACTTTGGGGAAGAGATCAAGAAACTaGAACAGGGGTGCACGTGCGTTCAGTTTAGAAGACCTCTTTGGC +
Preference number: 6 (lower is better)
Translates to: SLGGRQVTLGKRSRN*NRGARAFSLEDLFG
Trigger: GCCAAAGAGGTCTTCTAAACTGAACGCACGTGCACCCCTGTTCAAGTTTCTTGATCTCTTCCCCAAAGTCACCTGCCGTCCTCCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TCTGTGTGGCTCCTCTCTGGAGTCAGCTCCATGTCTATCACTTCCTaGGGAGGACGGCAGGTGACTTTGGGGAAGAGATCAAGAAACTTG +
Preference number: 6 (lower is better)
Translates to: SVWLLSGVSSMSITS*GGRQVTLGKRSRNL
Trigger: CAAGTTTCTTGATCTCTTCCCCAAAGTCACCTGCCGTCCTCCCAAGGAAGTGATAGACATGGAGCTGACTCCAGAGAGGAGCCACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CGGGTGCCATCGTCAAAGTCTGCCTGGATGACTAGGACTTTACGTTaGCCTGGGTTCGTTAACCAGGAGCGGACATCCTTAAGGAACGAA +
Preference number: 6 (lower is better)
Translates to: RVPSSKSAWMTRTLR*PGFVNQERTSLRNE
Trigger: TTCGTTCCTTAAGGATGTCCGCTCCTGGTTAACGAACCCAGGCAAACGTAAAGTCCTAGTCATCCAGGCAGACTTTGACGATGGCACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp ACTGGGCGTGCTTCTCAATGGCTTTCCTGTGGTCCTGGGAAACAGTaGGTGAGAACTTGTCTGGCAAGTCAGTTAAGCAGTAGGGGCACA +
Preference number: 6 (lower is better)
Translates to: TGRASQWLSCGPGKQ*VRTCLASQLSSRGT
Trigger: TGTGCCCCTACTGCTTAACTGACTTGCCAGACAAGTTCTCACCAACTGTTTCCCAGGACCACAGGAAAGCCATTGAGAAGCACGCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp ACAGACTCAGCAGTGGCCATCAGCTGCCTGCCTTCCTCCGTGATGTaGTCTATGATTTTCTCATTGGTTCCACACAGTTCGAAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: TDSAVAISCLPSSVM*SMIFSLVPHSSKSC
Trigger: GCAGCTCTTCGAACTGTGTGGAACCAATGAGAAAATCATAGACAACATCACGGAGGAAGGCAGGCAGCTGATGGCCACTGCTGAGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp GCAGGATCTAGAGCCCAGTTGGAAATGCCAACAAAGCCAACTTTTTaGTATGGGGCAGGGTCATCTTCAATGCACCCGTCTTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: AGSRAQLEMPTKPTF*YGAGSSSMHPSSSR
Trigger: CCTGCTGGAAGACGGGTGCATTGAAGATGACCCTGCCCCATACAAAAAAGTTGGCTTTGTTGGCATTTCCAACTGGGCTCTAGATCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CATTCCCAATGTCTAGGGTCTTGCACTCAAGCACAGCTTTGGCCGTaGCATCACGGACAGCCTTGTATTCATTACCGTGGACGAGGTATC +
Preference number: 6 (lower is better)
Translates to: HSQCLGSCTQAQLWP*HHGQPCIHYRGRGI
Trigger: GATACCTCGTCCACGGTAATGAATACAAGGCTGTCCGTGATGCAACGGCCAAAGCTGTGCTTGAGTGCAAGACCCTAGACATTGGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GCCTCAGGAGGCTCTCCACGTATCTCTTCTCTTGCTTaGGGAACAGCAGATCATCCCTTCTCCTTTTCAGCA +
Preference number: 6 (lower is better)
Translates to: ASGGSPRISSLA*GTADHPFSFSA
Trigger: TGCTGAAAAGGAGAAGGGATGATCTGCTGTTCCTCAAGCAAGAGAAGAGATACGTGGAGAGCCTCCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GTGACTGACTGCCTACCTGGGCTTTGGTCTGAAGTGTaGAGAGTCGGAGTAGCAAAATCCCTGGCCATTAAG +
Preference number: 6 (lower is better)
Translates to: VTDCLPGLWSEV*RVGVAKSLAIK
Trigger: CTTAATGGCCAGGGATTTTGCTACTCCGACTCTTCACACTTCAGACCAAAGCCCAGGTAGGCAGTCAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp AGGGAGCTAGGTCTTCTTCAACAACTTCGCCAATGGTaGCTGACTGCCTACCTGGGCTTTGGTCTGAAGTGT +
Preference number: 6 (lower is better)
Translates to: RELGLLQQLRQW*LTAYLGFGLKC
Trigger: ACACTTCAGACCAAAGCCCAGGTAGGCAGTCAGTCACCATTGGCGAAGTTGTTGAAGAAGACCTAGCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp AGTCATTCAGCTGCCCAAAGTCCCATACCAAAGGAATaGGGCTTGGAGGCAGAGCATGAACACGGTAGACCA +
Preference number: 6 (lower is better)
Translates to: SHSAAQSPIPKE*GLEAEHEHGRP
Trigger: TGGTCTACCGTGTTCATGCTCTGCCTCCAAGCCTCATTCCTTTGGTATGGGACTTTGGGCAGCTGAATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GCACCACAGAGGCACAGGCATCTGAATGGTAGCCAATaGAGACATCTGCAGGACTGTACTTGTGTCTGGCAA +
Preference number: 6 (lower is better)
Translates to: APQRHRHLNGSQ*RHLQDCTCVWQ
Trigger: TTGCCAGACACAAGTACAGTCCTGCAGATGTCTTCATTGGCTACCATTCAGATGCCTGTGCCTCTGTGGTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GGAGAGAGGAAACTTATAAGTTTCATCAGGTGTTCCTaGAGCCTCTTGGAGCTCACGGAGGCAGGACCACAG +
Preference number: 6 (lower is better)
Translates to: GERKLISFIRCS*SLLELTEAGPQ
Trigger: CTGTGGTCCTGCCTCCGTGAGCTCCAAGAGGCTTCAGGAACACCTGATGAAACTTATAAGTTTCCTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GTTTCCTCACCAGGTACACCCTGTGCCAATCATTGTTaGCGCGTGTGCAGAACTCCTCAACATGCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: VSSPGTPCANHC*RVCRTPQHASG
Trigger: TCCTGAAGCATGTTGAGGAGTTCTGCACACGCGTCAACAATGATTGGCACAGGGTGTACCTGGTGAGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp CAGGTGACATTTTCCAGGCCCCTCCAAGTCCTGGCGTaGACTAGCAGGTCTTCAGGCATTGTTGGAAGAAAA +
Preference number: 6 (lower is better)
Translates to: QVTFSRPLQVLA*TSRSSGIVGRK
Trigger: TTTTCTTCCAACAATGCCTGAAGACCTGCTAGTTCACGCCAGGACTTGGAGGGGCCTGGAAAATGTCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CTCTTTCTCCTCATATTGCAGACTGGTCCATTTCCTTaGACGGCCATCATGAATCATGGGCTCTCGGACCAC +
Preference number: 6 (lower is better)
Translates to: LFLLILQTGPFP*TAIMNHGLSDH
Trigger: GTGGTCCGAGAGCCCATGATTCATGATGGCCGTGCAAGGAAATGGACCAGTCTGCAATATGAGGAGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TTTCCTTCCAGGAATGGGGCCATCTGCTTTTTCACGTaGTCCCACAGGTTCGTCCAAACCTCTTTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: FPSRNGAICFFT*SHRFVQTSFSS
Trigger: TGAGGAGAAAGAGGTTTGGACGAACCTGTGGGAGCACGTGAAAAAGCAGATGGCCCCATTCCTGGAAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp ATAGGTTTGTCAAGTATATACGCCATCTTTGACGAATaGGGAGGACAGGGCTCAGGTCGCTGTGGAGGGCTT +
Preference number: 6 (lower is better)
Translates to: IGLSSIYAIFDE*GGQGSGRCGGL
Trigger: AAGCCCTCCACAGCGACCTGAGCCCTGTCCTCCGCATTCGTCAAAGATGGCGTATATACTTGACAAACCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AGCTGCCTCAGGAGGCTCTCCACGTATCTCTTCTCTTaGTTGAGGAACAGCAGATCATCCCTTCTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: SCLRRLSTYLFS*LRNSRSSLLLF
Trigger: GAAAAGGAGAAGGGATGATCTGCTGTTCCTCAAGCAAGAGAAGAGATACGTGGAGAGCCTCCTGAGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AACAGTGTCTGGGGAAATCTTCTGGCCATCTTTGGGTaGCTCAATAACGTAGACGCCCCTGCTGTTGATTGC +
Preference number: 6 (lower is better)
Translates to: NSVWGNLLAIFG*LNNVDAPAVDC
Trigger: GCAATCAACAGCAGGGGCGTCTACGTTATTGAGGCACCCAAAGATGGCCAGAAGATTTCCCCAGACACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp ACCACTGTTTTCCAGTTATCTAGGAAGTCCTCCATCTaGCTGCAGAGGGCTCCCAGGAGCTGTATGACATCT +
Preference number: 6 (lower is better)
Translates to: TTVFQLSRKSSI*LQRAPRSCMTS
Trigger: AGATGTCATACAGCTCCTGGGAGCCCTCTGCAGGCAGATGGAGGACTTCCTAGATAACTGGAAAACAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GCAGCAATGATATGCAGGCCAGAGTCCTCATGTAGGTaGTCACCATCCACTGTCCGATCACACAAGATCTCT +
Preference number: 6 (lower is better)
Translates to: AAMICRPESSCR*SPSTVRSHKIS
Trigger: AGAGATCTTGTGTGATCGGACAGTGGATGGTGAGCACCTACATGAGGACTCTGGCCTGCATATCATTGCTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GACTGGTCCATTTCCTTGCACGGCCATCATGAATCATaGGCTCTCGGACCACCGAGTAAAACTGCAGGAATT +
Preference number: 6 (lower is better)
Translates to: DWSISLHGHHES*ALGPPSKTAGI
Trigger: AATTCCTGCAGTTTTACTCGGTGGTCCGAGAGCCCATGATTCATGATGGCCGTGCAAGGAAATGGACCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GTAAGATTTTTCGGGCAGCCCCTCGTCAGTATGCCCTaGAGGACTGAGCTCAAGCAGTTTACAGATAAGCTC +
Preference number: 6 (lower is better)
Translates to: VRFFGQPLVSMP*RTELKQFTDKL
Trigger: GAGCTTATCTGTAAACTGCTTGAGCTCAGTCCTCCAGGGCATACTGACGAGGGGCTGCCCGAAAAATCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TCCGGGGTTGATGACACCACCAAGGTATTGTCGTTCTaGAGGTCTCCTTGCACAGTAGCTGCAGAAGGCAAT +
Preference number: 6 (lower is better)
Translates to: SGVDDTTKVLSF*RSPCTVAAEGN
Trigger: ATTGCCTTCTGCAGCTACTGTGCAAGGAGACCTCAAGAACGACAATACCTTGGTGGTGTCATCAACCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CCACCTTCATTACTTTTCCTAACAGGGGTGGCCAACTaGCCTTTGAGTTCAGCTTCCTGGTCTCCGTGCTTG +
Preference number: 6 (lower is better)
Translates to: PPSLLFLTGVAN*PLSSASWSPCL
Trigger: CAAGCACGGAGACCAGGAAGCTGAACTCAAAGGCAAGTTGGCCACCCCTGTTAGGAAAAGTAATGAAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GCAGTGGCCATCAGCTGCCTGCCTTCCTCCGTGATGTaGTCTATGATTTTCTCATTGGTTCCACACAGTTCG +
Preference number: 6 (lower is better)
Translates to: AVAISCLPSSVM*SMIFSLVPHSS
Trigger: CGAACTGTGTGGAACCAATGAGAAAATCATAGACAACATCACGGAGGAAGGCAGGCAGCTGATGGCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TGCCTCAGGAGGCTCTCCACGTATCTCTTCTCTTGCTaGAGGAACAGCAGATCATCCCTTCTCCTTTTCAGC +
Preference number: 6 (lower is better)
Translates to: CLRRLSTYLFSC*RNSRSSLLLFS
Trigger: GCTGAAAAGGAGAAGGGATGATCTGCTGTTCCTCAAGCAAGAGAAGAGATACGTGGAGAGCCTCCTGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GAGCTGCCTCAGGAGGCTCTCCACGTATCTCTTCTCTaGCTTGAGGAACAGCAGATCATCCCTTCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: ELPQEALHVSLL*LEEQQIIPSPF
Trigger: AAAAGGAGAAGGGATGATCTGCTGTTCCTCAAGCAAGAGAAGAGATACGTGGAGAGCCTCCTGAGGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TTTTTCATAACCTCCCGCAGGCAGTATCTGTCAGCCTaGCTTTCACAGGCACTGGTAGCTTGTACGAGGTCC +
Preference number: 6 (lower is better)
Translates to: FFITSRRQYLSA*LSQALVACTRS
Trigger: GGACCTCGTACAAGCTACCAGTGCCTGTGAAAGCAAGGCTGACAGATACTGCCTGCGGGAGGTTATGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GGACGGCAGGTGACTTTGGGGAAGAGATCAAGAAACTaGAACAGGGGTGCACGTGCGTTCAGTTTAGAAGAC +
Preference number: 6 (lower is better)
Translates to: GRQVTLGKRSRN*NRGARAFSLED
Trigger: GTCTTCTAAACTGAACGCACGTGCACCCCTGTTCAAGTTTCTTGATCTCTTCCCCAAAGTCACCTGCCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp AGTTTCCTCACCAGGTACACCCTGTGCCAATCATTGTaGACGCGTGTGCAGAACTCCTCAACATGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: SFLTRYTLCQSL*TRVQNSSTCFR
Trigger: CCTGAAGCATGTTGAGGAGTTCTGCACACGCGTCAACAATGATTGGCACAGGGTGTACCTGGTGAGGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GAGAGTTTCCTCACCAGGTACACCCTGTGCCAATCATaGTTGACGCGTGTGCAGAACTCCTCAACATGCTTC +
Preference number: 6 (lower is better)
Translates to: ESFLTRYTLCQS*LTRVQNSSTCF
Trigger: GAAGCATGTTGAGGAGTTCTGCACACGCGTCAACAATGATTGGCACAGGGTGTACCTGGTGAGGAAACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TGTCTAGGGTCTTGCACTCAAGCACAGCTTTGGCCGTaGCATCACGGACAGCCTTGTATTCATTACCGTGGA +
Preference number: 6 (lower is better)
Translates to: CLGSCTQAQLWP*HHGQPCIHYRG
Trigger: TCCACGGTAATGAATACAAGGCTGTCCGTGATGCAACGGCCAAAGCTGTGCTTGAGTGCAAGACCCTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp ATCAGCTGCCTGCCTTCCTCCGTGATGTTGTCTATGATTTTCTCATaGGTTCCACACAGTTCGAAGAGCTGCCTCACATCTGGCCACTTG +
Preference number: 6 (lower is better)
Translates to: ISCLPSSVMLSMIFS*VPHSSKSCLTSGHL
Trigger: CAAGTGGCCAGATGTGAGGCAGCTCTTCGAACTGTGTGGAACCAATGAGAAAATCATAGACAACATCACGGAGGAAGGCAGGCAGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TCCTTTGACTGGCTTGTCTCTATCTCCATCTCCTCCTGCTCAGGTTaGTCCTCTGGCTTGAACAACTGGCTGATGGTGACATTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: SFDWLVSISISSCSG*SSGLNNWLMVTFCS
Trigger: ACTGCAGAATGTCACCATCAGCCAGTTGTTCAAGCCAGAGGACAAACCTGAGCAGGAGGAGATGGAGATAGAGACAAGCCAGTCAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp AGCCGCCTTCTATTTAAGTTCCAGATGTCAAGAAACTaGCTCTGGTGCTCGAGGATCAGCTCCAGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: SRLLFKFQMSRN*LWCSRISSSCP
Trigger: TGGACAGCTGGAGCTGATCCTCGAGCACCAGAGTCAGTTTCTTGACATCTGGAACTTAAATAGAAGGCGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp TGGGGAAAGCTGGAGCCAAAAATGATCTCTGGTTGCTaGCCCTCAAAGAACGTCTGCTGTAGGATTTGCAGC +
Preference number: 6 (lower is better)
Translates to: WGKLEPKMISGC*PSKNVCCRICS
Trigger: GCTGCAAATCCTACAGCAGACGTTCTTTGAGGGTCAGCAACCAGAGATCATTTTTGGCTCCAGCTTTCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp TTTCCACGAACTTCTTCGATAATCCCTCAGTGTCTGTaGTATACTGAGCCTGCACCCAGAGCTCCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: FPRTSSIIPQCL*YTEPAPRAPPG
Trigger: ACCTGGAGGAGCTCTGGGTGCAGGCTCAGTATATCACAGACACTGAGGGATTATCGAAGAAGTTCGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GGTATTGTCGTTCTTGAGGTCTCCTTGCACAGTAGCTaGAGAAGGCAATTTCTGTCCGCACTCGCTACAGAA +
Preference number: 6 (lower is better)
Translates to: GIVVLEVSLHSS*RRQFLSALATE
Trigger: TTCTGTAGCGAGTGCGGACAGAAATTGCCTTCTGCAGCTACTGTGCAAGGAGACCTCAAGAACGACAATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp ACGCTGAAGATGCGGTCCAGCATGACCACAGCAGCCTaGTTCTTCCCTTTCAACAGTTCCTTTCTTGTACTA +
Preference number: 6 (lower is better)
Translates to: TLKMRSSMTTAA*FFPFNSSFLVL
Trigger: TAGTACAAGAAAGGAACTGTTGAAAGGGAAGAAGCAGGCTGCTGTGGTCATGCTGGACCGCATCTTCAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AAATTTCTGGCAGAATCTTTCAGCTTATCGGGAAGGTaGTGGTCATTGTCCAGGGCCCTCCAGAGTTCCTGT +
Preference number: 6 (lower is better)
Translates to: KFLAESFSLSGR*WSLSRALQSSC
Trigger: ACAGGAACTCTGGAGGGCCCTGGACAATGACCAGCACCTTCCCGATAAGCTGAAAGATTCTGCCAGAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TATTTAAAAGTTCCTTCAGTTCCTCTGTGGAGTAGGTaGGCAATGCCTCGGGGTAACCATGGCCATCAGGGA +
Preference number: 6 (lower is better)
Translates to: YLKVPSVPLWSR*AMPRGNHGHQG
Trigger: TCCCTGATGGCCATGGTTACCCCGAGGCATTGCGCACCTACTCCACAGAGGAACTGAAGGAACTTTTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CTTCCTCATGAACATCTGCGAGGCAGAGAGCACATCTaGAATCACACAAGTCTCACTGGGATTCACAGAGAC +
Preference number: 6 (lower is better)
Translates to: LPHEHLRGREHI*NHTSLTGIHRD
Trigger: GTCTCTGTGAATCCCAGTGAGACTTGTGTGATTGCAGATGTGCTCTCTGCCTCGCAGATGTTCATGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TCTCCTTTTTACTCATTTGGGTGGTCCAGGAGGCATTaGAATCGGACTCCTCTGGTTTCTCCAGTTCCTTGC +
Preference number: 6 (lower is better)
Translates to: SPFYSFGWSRRH*NRTPLVSPVPC
Trigger: GCAAGGAACTGGAGAAACCAGAGGAGTCCGATTCCAATGCCTCCTGGACCACCCAAATGAGTAAAAAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GATGTCTCCCCCTTAGATTCAGGTAATGGAGCCTTCTaGGAAGCATCAGTCATCTTAGGGTGGCCTTTGAAC +
Preference number: 6 (lower is better)
Translates to: DVSPLDSGNGAF*EASVILGWPLN
Trigger: GTTCAAAGGCCACCCTAAGATGACTGATGCTTCCCAGAAGGCTCCATTACCTGAATCTAAGGGGGAGACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CATACTTATAAGGGATGGGTTTGTCCAGGCTCTGTCTaGGAATGTCCATTTTGCCCTCGACGAGAGATCCCA +
Preference number: 6 (lower is better)
Translates to: HTYKGWVCPGSV*ECPFCPRREIP
Trigger: TGGGATCTCTCGTCGAGGGCAAAATGGACATTCCCAGACAGAGCCTGGACAAACCCATCCCTTATAAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CCAGGACCCTCACGGGCACATCACTCAGGTAGTCTATaGAGTTCTCCAAGTAGGAAGATAAGCTTTCAAGAG +
Preference number: 6 (lower is better)
Translates to: PGPSRAHHSGSL*SSPSRKISFQE
Trigger: CTCTTGAAAGCTTATCTTCCTACTTGGAGAACTCCATAGACTACCTGAGTGATGTGCCCGTGAGGGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AGCTCAGCAGACAGGGCAGGAATCTCAAAGAACTGGTaGTTAGCTGTGATGTTGCAGACAGTTTCATGGAGG +
Preference number: 6 (lower is better)
Translates to: SSADRAGISKNW*LAVMLQTVSWR
Trigger: CCTCCATGAAACTGTCTGCAACATCACAGCTAACCACCAGTTCTTTGAGATTCCTGCCCTGTCTGCTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CAAACACAGGCTCCCCGTTATGCACAGGCCATGACTTaGTTATCACGGCAGACAAGAGGGTTCCAAATTTCT +
Preference number: 6 (lower is better)
Translates to: QTQAPRYAQAMT*LSRQTRGFQIS
Trigger: AGAAATTTGGAACCCTCTTGTCTGCCGTGATAACCAAGTCATGGCCTGTGCATAACGGGGAGCCTGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CTTTTCAGCAAGCTCCTCACATCACAGGCCTTCTCTTaGGATGGCAGCCGCCTTCTATTTAAGTTCCAGATG +
Preference number: 6 (lower is better)
Translates to: LFSKLLTSQAFS*DGSRLLFKFQM
Trigger: CATCTGGAACTTAAATAGAAGGCGGCTGCCATCCCAAGAGAAGGCCTGTGATGTGAGGAGCTTGCTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GCATCAGCTTATTTAAAAGTTCCTTCAGTTCCTCTGTaGAGTAGGTGCGCAATGCCTCGGGGTAACCATGGC +
Preference number: 6 (lower is better)
Translates to: ASAYLKVPSVPL*SRCAMPRGNHG
Trigger: GCCATGGTTACCCCGAGGCATTGCGCACCTACTCCACAGAGGAACTGAAGGAACTTTTAAATAAGCTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GCTTCATCAAAGAACAAGATGGTATCCAGCTTGTGCTaGGCCTTATTGGAGAAGGCTGTTCTCTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: ASSKNKMVSSLC*ALLEKAVLSAS
Trigger: GGAGGCTGAGAGAACAGCCTTCTCCAATAAGGCCCAGCACAAGCTGGATACCATCTTGTTCTTTGATGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CTTTCTCTTCTAAAGAGGCATGGTAGCATACCCCAATaGCCATCACCAGGGACCAGAGAACAGGATCTCTCT +
Preference number: 6 (lower is better)
Translates to: LSLLKRHGSIPQ*PSPGTREQDLS
Trigger: AGAGAGATCCTGTTCTCTGGTCCCTGGTGATGGCCATTGGGGTATGCTACCATGCCTCTTTAGAAGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TGCTGCTATTGTATGGTTTGGGAAAGCACCTGGCGATaGCAGTGCGGTAGGATGCTTTCTCTTCTAAAGAGG +
Preference number: 6 (lower is better)
Translates to: CCYCMVWESTWR*QCGRMLSLLKR
Trigger: CCTCTTTAGAAGAGAAAGCATCCTACCGCACTGCCATCGCCAGGTGCTTTCCCAAACCATACAATAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp ATGCAAATCTTTACCCGGTTAATGTTCCTGCAGATCTaGGTGTATTCCTGGTCCTGGGGAAAGCTGGAGCCA +
Preference number: 6 (lower is better)
Translates to: MQIFTRLMFLQI*VYSWSWGKLEP
Trigger: TGGCTCCAGCTTTCCCCAGGACCAGGAATACACCCAGATCTGCAGGAACATTAACCGGGTAAAGATTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GCCTCCCTGGTGACCCACTCCTTTAAACTGCGGACCTaGTTCTCTTCTTGCTTGTTTAGAAGAACATGGAGA +
Preference number: 6 (lower is better)
Translates to: ASLVTHSFKLRT*FSSCLFRRTWR
Trigger: TCTCCATGTTCTTCTAAACAAGCAAGAAGAGAACCAGGTCCGCAGTTTAAAGGAGTGGGTCACCAGGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TCCCAATGTCTAGGGTCTTGCACTCAAGCACAGCTTTaGCCGTTGCATCACGGACAGCCTTGTATTCATTAC +
Preference number: 6 (lower is better)
Translates to: SQCLGSCTQAQL*PLHHGQPCIHY
Trigger: GTAATGAATACAAGGCTGTCCGTGATGCAACGGCCAAAGCTGTGCTTGAGTGCAAGACCCTAGACATTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TTGGTTGACAATTCTGCATTAAAATTTAACACCCCGTaGCTCTGCACCCTGAGCAGGCTGCTCAGGATGAGG +
Preference number: 6 (lower is better)
Translates to: LVDNSALKFNTP*LCTLSRLLRMR
Trigger: CCTCATCCTGAGCAGCCTGCTCAGGGTGCAGAGCCACGGGGTGTTAAATTTTAATGCAGAATTGTCAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TTGCTGCACTTGGTACTGGCAGTTGGAGAGGATCAGTaGATTCAGATCCCGTTCCACCTCATAACTGATGAC +
Preference number: 6 (lower is better)
Translates to: LLHLVLAVGEDQ*IQIPFHLITDD
Trigger: GTCATCAGTTATGAGGTGGAACGGGATCTGAATCCACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CAA 72 bp GGAAGATATGGCTGTCTTTCAGGGAGTCTAGCTTGCTaGCCATTTCTCGGATGTCAGGGCTCAGGCAGTAAT +
Preference number: 6 (lower is better)
Translates to: GRYGCLSGSLAC*PFLGCQGSGSN
Trigger: ATTACTGCCTGAGCCCTGACATCCGAGAAATGGCAAGCAAGCTAGACTCCCTGAAAGACAGCCATATCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp ATGTCTATCACTTCCTTGGGAGGACGGCAGGTGACTTaGGGGAAGAGATCAAGAAACTTGAACAGGGGTGCA +
Preference number: 6 (lower is better)
Translates to: MSITSLGGRQVT*GKRSRNLNRGA
Trigger: TGCACCCCTGTTCAAGTTTCTTGATCTCTTCCCCAAAGTCACCTGCCGTCCTCCCAAGGAAGTGATAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp ATCTCCATCTCCTCCTGCTCAGGTTTGTCCTCTGGCTaGAACAACTGGCTGATGGTGACATTCTGCAGTTTG +
Preference number: 6 (lower is better)
Translates to: ISISSCSGLSSG*NNWLMVTFCSL
Trigger: CAAACTGCAGAATGTCACCATCAGCCAGTTGTTCAAGCCAGAGGACAAACCTGAGCAGGAGGAGATGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CTTGTCTCTATCTCCATCTCCTCCTGCTCAGGTTTGTCCTCTGGCTaGAACAACTGGCTGATGGTGACATTCTGCAGTTTGGTGACATCT +
Preference number: 6 (lower is better)
Translates to: LVSISISSCSGLSSG*NNWLMVTFCSLVTS
Trigger: AGATGTCACCAAACTGCAGAATGTCACCATCAGCCAGTTGTTCAAGCCAGAGGACAAACCTGAGCAGGAGGAGATGGAGATAGAGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp AACCCAGTGGACCTCATGCAGATTATGTCATCATACTaGTGCCAGTCTCCATTGCCCAAGGAGGTAGAGACA +
Preference number: 6 (lower is better)
Translates to: NPVDLMQIMSSY*CQSPLPKEVET
Trigger: TGTCTCTACCTCCTTGGGCAATGGAGACTGGCATCAGTATGATGACATAATCTGCATGAGGTCCACTGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp ACCGAGAGCCCTTGTGGGATTTCAACAAGGTATAAATaGCCCGGGCTCCGACGCCATATTTTCCCATTGATA +
Preference number: 6 (lower is better)
Translates to: TESPCGISTRYK*PGLRRHIFPLI
Trigger: TATCAATGGGAAAATATGGCGTCGGAGCCCGGGTCATTTATACCTTGTTGAAATCCCACAAGGGCTCTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp CAGTTAAGCAGTAGGGGCACATCATTTGCCCAGGGATaGGCCAGGTCTGAATGCAACGTAGACAATACACAT +
Preference number: 6 (lower is better)
Translates to: QLSSRGTSFAQG*ARSECNVDNTH
Trigger: ATGTGTATTGTCTACGTTGCATTCAGACCTGGCTCATCCCTGGGCAAATGATGTGCCCCTACTGCTTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp CTTCAGGCATTGTTGGAAGAAAAGCATTCGCCATGTTaGCAGGATAGAAGGCCAAGTTCCTCAGGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: LQALLEEKHSPC*QDRRPSSSGAS
Trigger: TGAAGCCCCTGAGGAACTTGGCCTTCTATCCTGTCAACATGGCGAATGCTTTTCTTCCAACAATGCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GGTGATTCGGTCATGCAACAGCTTTCTCAGCCCATCTaGACTGTGACTGTGAATGAAGCCTCTGATGGAACT +
Preference number: 6 (lower is better)
Translates to: GDSVMQQLSQPI*TVTVNEASDGT
Trigger: AGTTCCATCAGAGGCTTCATTCACAGTCACAGTTCAGATGGGCTGAGAAAGCTGTTGCATGACCGAATCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GATCCAAGTCAGAACAGCAGTAATCTTTTGGTAGCTTaGTCTCACCATTGGTCTCCAGTGACCGCCTCAGTG +
Preference number: 6 (lower is better)
Translates to: DPSQNSSNLLVA*SHHWSPVTASV
Trigger: CACTGAGGCGGTCACTGGAGACCAATGGTGAGATCAAGCTACCAAAAGATTACTGCTGTTCTGACTTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TCCCTTTCAACAGTTCCTTTCTTGTACTATCGAGGATaGGGTTCTTGGCTTGCTGGAAAAACCCAGTGGACC +
Preference number: 6 (lower is better)
Translates to: SLSTVPFLYYRG*GSWLAGKTQWT
Trigger: GGTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCGATAGTACAAGAAAGGAACTGTTGAAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GACTTTGGGGAAGAGATCAAGAAACTTGAACAGGGGTaGACGTGCGTTCAGTTTAGAAGACCTCTTTGGCTG +
Preference number: 6 (lower is better)
Translates to: DFGEEIKKLEQG*TCVQFRRPLWL
Trigger: CAGCCAAAGAGGTCTTCTAAACTGAACGCACGTGCACCCCTGTTCAAGTTTCTTGATCTCTTCCCCAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TTGGCTTCATCAAAGAACAAGATGGTATCCAGCTTGTaGTGGGCCTTATTGGAGAAGGCTGTTCTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: LASSKNKMVSSL*WALLEKAVLSA
Trigger: GGCTGAGAGAACAGCCTTCTCCAATAAGGCCCAGCACAAGCTGGATACCATCTTGTTCTTTGATGAAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CAGTCTCTGTACGATCTGCTGGATGTAGAGCTTTTCTaGAGAGTCATTCAGCTGCCCAAAGTCCCATACCAA +
Preference number: 6 (lower is better)
Translates to: QSLYDLLDVELF*RVIQLPKVPYQ
Trigger: TTGGTATGGGACTTTGGGCAGCTGAATGACTCTGCAGAAAAGCTCTACATCCAGCAGATCGTACAGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TATTGTATGGTTTGGGAAAGCACCTGGCGATGGCAGTaGGGTAGGATGCTTTCTCTTCTAAAGAGGCATGGT +
Preference number: 6 (lower is better)
Translates to: YCMVWESTWRWQ*GRMLSLLKRHG
Trigger: ACCATGCCTCTTTAGAAGAGAAAGCATCCTACCGCACTGCCATCGCCAGGTGCTTTCCCAAACCATACAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CTTCTGACACACTGTTTCATAGGCCTTGGCAAAGGGTaGAAAATACCCACGGATTTTATCCTGCACCAGCCT +
Preference number: 6 (lower is better)
Translates to: LLTHCFIGLGKG*KIPTDFILHQP
Trigger: AGGCTGGTGCAGGATAAAATCCGTGGGTATTTTGCACCCTTTGCCAAGGCCTATGAAACAGTGTGTCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TTCTCTAGATCAAACTCTTGTGAGGTTTCCCCACCTTaGTGCACTTGGTACTGGCAGTTGGAGAGGATCAGT +
Preference number: 6 (lower is better)
Translates to: FSRSNSCEVSPP*CTWYWQLERIS
Trigger: ACTGATCCTCTCCAACTGCCAGTACCAAGTGCAGCAAGGTGGGGAAACCTCACAAGAGTTTGATCTAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CCA 72 bp ACAGTTCCTTTCTTGTACTATCGAGGATGCGGTTCTTaGCTTGCTGGAAAAACCCAGTGGACCTCATGCAGA +
Preference number: 6 (lower is better)
Translates to: TVPFLYYRGCGS*LAGKTQWTSCR
Trigger: TCTGCATGAGGTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCGATAGTACAAGAAAGGAACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GATGTCCTGAAGCAGCTGTTTGGCCTTGATGAACTGTaGGCTGATCTGGTCCAGTTTCTCATTACCAAAGTC +
Preference number: 6 (lower is better)
Translates to: DVLKQLFGLDEL*ADLVQFLITKV
Trigger: GACTTTGGTAATGAGAAACTGGACCAGATCAGCCCACAGTTCATCAAGGCCAAACAGCTGCTTCAGGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GGCTTTCCTTCACTGTCTTCAGCCACTCCAAATTTCTaGCAGAATCTTTCAGCTTATCGGGAAGGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: GFPSLSSATPNF*QNLSAYREGAG
Trigger: ACCAGCACCTTCCCGATAAGCTGAAAGATTCTGCCAGAAATTTGGAGTGGCTGAAGACAGTGAAGGAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp ACATATGTGGTTACCAGTGGACTCAGCTCAGGAATATaGCTCTCAGTCCCCAGAAGAACGTGTTCCACAAAG +
Preference number: 6 (lower is better)
Translates to: TYVVTSGLSSGI*LSVPRRTCSTK
Trigger: CTTTGTGGAACACGTTCTTCTGGGGACTGAGAGCCATATTCCTGAGCTGAGTCCACTGGTAACCACATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AATGAATTTGTTCACTGCCTCCAATTGCTTTGCTTCTaGATGGAGGCTGCCATTGGGGGAACGGTACAAAGC +
Preference number: 6 (lower is better)
Translates to: NEFVHCLQLLCF*MEAAIGGTVQS
Trigger: GCTTTGTACCGTTCCCCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAAATTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TTCTCCTTTTTACTCATTTGGGTGGTCCAGGAGGCATaGGAATCGGACTCCTCTGGTTTCTCCAGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: FSFLLIWVVQEA*ESDSSGFSSSL
Trigger: CAAGGAACTGGAGAAACCAGAGGAGTCCGATTCCAATGCCTCCTGGACCACCCAAATGAGTAAAAAGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp AACAGTTCCTTTCTTGTACTATCGAGGATGCGGTTCTaGGCTTGCTGGAAAAACCCAGTGGACCTCATGCAG +
Preference number: 6 (lower is better)
Translates to: NSSFLVLSRMRF*ACWKNPVDLMQ
Trigger: CTGCATGAGGTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCGATAGTACAAGAAAGGAACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp AGAGCCCAGTTGGAAATGCCAACAAAGCCAACTTTTTaGTATGGGGCAGGGTCATCTTCAATGCACCCGTCT +
Preference number: 6 (lower is better)
Translates to: RAQLEMPTKPTF*YGAGSSSMHPS
Trigger: AGACGGGTGCATTGAAGATGACCCTGCCCCATACAAAAAAGTTGGCTTTGTTGGCATTTCCAACTGGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TCCAGGCAGCTGATGAAGAGCAGGTACAGTTCCGTTTaGTCTTCCGTTAGGAACGCCTTCTTCTCTAACTGT +
Preference number: 6 (lower is better)
Translates to: SRQLMKSRYSSV*SSVRNAFFSNC
Trigger: ACAGTTAGAGAAGAAGGCGTTCCTAACGGAAGACAAAACGGAACTGTACCTGCTCTTCATCAGCTGCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp AGAGAGGATCTTGCTTTCCTTAATGAATTTGTTCACTGCCTCCAATaGCTTTGCTTCTGGATGGAGGCTGCCATTGGGGGAACGGTACAA +
Preference number: 6 (lower is better)
Translates to: REDLAFLNEFVHCLQ*LCFWMEAAIGGTVQ
Trigger: TTGTACCGTTCCCCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAAATTCATTAAGGAAAGCAAGATCCTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CCTCTGATGGAACTGTATTCCACTCTCGAGACATTCTGGAACTGTTaGACCAGATCCCTTTGCAGAGCCAATATCTCAGGCAGGAATTTC +
Preference number: 6 (lower is better)
Translates to: PLMELYSTLETFWNC*TRSLCRANISGRNF
Trigger: GAAATTCCTGCCTGAGATATTGGCTCTGCAAAGGGATCTGGTCAAACAGTTCCAGAATGTCTCGAGAGTGGAATACAGTTCCATCAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp ATTCCACAGTATCCTTGCTACTGCCACCACGGTGAATaGCATACTTATAAGGGATGGGTTTGTCCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: IPQYPCYCHHGE*HTYKGWVCPGS
Trigger: AGAGCCTGGACAAACCCATCCCTTATAAGTATGTCATTCACCGTGGTGGCAGTAGCAAGGATACTGTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GACATGTACAAGCCGCTGCATGTTGCTGAAGACCTCTaGAAACTTCTCCACTTCTGTATTGCTGTTGTGGTC +
Preference number: 6 (lower is better)
Translates to: DMYKPLHVAEDL*KLLHFCIAVVV
Trigger: GACCACAACAGCAATACAGAAGTGGAGAAGTTTTCAGAGGTCTTCAGCAACATGCAGCGGCTTGTACATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp TTGTCGAGCTCCTTTAAGAGCATATCACTATGGTCATaGAACCACCGGAAAACTTTGACACAGCGCTCCACG +
Preference number: 6 (lower is better)
Translates to: LSSSFKSISLWS*NHRKTLTQRST
Trigger: CGTGGAGCGCTGTGTCAAAGTTTTCCGGTGGTTTCATGACCATAGTGATATGCTCTTAAAGGAGCTCGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp CGTACTTCTGACCCCCAAGGTAGACATAGTACTGGTTaGGAGCATCATACAGGCTCTCATAGAGATTCTGCA +
Preference number: 6 (lower is better)
Translates to: RTSDPQGRHSTG*EHHTGSHRDSA
Trigger: TGCAGAATCTCTATGAGAGCCTGTATGATGCTCTCAACCAGTACTATGTCTACCTTGGGGGTCAGAAGTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GGTTCTTGGCTTGCTGGAAAAACCCAGTGGACCTCATaGAGATTATGTCATCATACTGATGCCAGTCTCCAT +
Preference number: 6 (lower is better)
Translates to: GSWLAGKTQWTS*RLCHHTDASLH
Trigger: ATGGAGACTGGCATCAGTATGATGACATAATCTGCATGAGGTCCACTGGGTTTTTCCAGCAAGCCAAGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp GCGCAGTGCAGTTTTATGAAGACATGTACAAGCCGCTaGATGTTGCTGAAGACCTCTGAAAACTTCTCCACT +
Preference number: 6 (lower is better)
Translates to: AQCSFMKTCTSR*MLLKTSENFST
Trigger: AGTGGAGAAGTTTTCAGAGGTCTTCAGCAACATGCAGCGGCTTGTACATGTCTTCATAAAACTGCACTGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp CGGACATCCTTAAGGAACGAATATTCAGTGTCATATTaGTGTAGTGACAGCACCACAGGTTTCGAGGCCAGT +
Preference number: 6 (lower is better)
Translates to: RTSLRNEYSVSY*CSDSTTGFEAS
Trigger: ACTGGCCTCGAAACCTGTGGTGCTGTCACTACAGCAATATGACACTGAATATTCGTTCCTTAAGGATGTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp TTCCTTAATGAATTTGTTCACTGCCTCCAATTGCTTTaGTTCTGGATGGAGGCTGCCATTGGGGGAACGGTA +
Preference number: 6 (lower is better)
Translates to: FLNEFVHCLQLL*FWMEAAIGGTV
Trigger: TACCGTTCCCCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAAATTCATTAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp ATAAGCTCAGCAGACAGGGCAGGAATCTCAAAGAACTaGTGGTTAGCTGTGATGTTGCAGACAGTTTCATGG +
Preference number: 6 (lower is better)
Translates to: ISSADRAGISKN*WLAVMLQTVSW
Trigger: CCATGAAACTGTCTGCAACATCACAGCTAACCACCAGTTCTTTGAGATTCCTGCCCTGTCTGCTGAGCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GTCATAACAAGGGTTGTACAGGTATTCCAAGACCTCTaGAAGCGAAACCTTCAACTCTCTGGGGTCCTTATC +
Preference number: 6 (lower is better)
Translates to: VITRVVQVFQDL*KRNLQLSGVLI
Trigger: GATAAGGACCCCAGAGAGTTGAAGGTTTCGCTTCCAGAGGTCTTGGAATACCTGTACAACCCTTGTTATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TTGATCTGCCCAACACGCTCTGAGATCCAACCTTTTTaGTCCTGGGGGTTCATAGTGCACATGAATTTAAGG +
Preference number: 6 (lower is better)
Translates to: LICPTRSEIQPF*SWGFIVHMNLR
Trigger: CCTTAAATTCATGTGCACTATGAACCCCCAGGACCAAAAAGGTTGGATCTCAGAGCGTGTTGGGCAGATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AGCAGCTGTTTGGCCTTGATGAACTGTGGGCTGATCTaGTCCAGTTTCTCATTACCAAAGTCCTCAAAGGAA +
Preference number: 6 (lower is better)
Translates to: SSCLALMNCGLI*SSFSLPKSSKE
Trigger: TTCCTTTGAGGACTTTGGTAATGAGAAACTGGACCAGATCAGCCCACAGTTCATCAAGGCCAAACAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp TTGCTTTCACAGGCACTGGTAGCTTGTACGAGGTCCTaGACAGTGCATTTGCCTTTAATGAAGGATAGCATC +
Preference number: 6 (lower is better)
Translates to: LLSQALVACTRS*TVHLPLMKDSI
Trigger: GATGCTATCCTTCATTAAAGGCAAATGCACTGTCCAGGACCTCGTACAAGCTACCAGTGCCTGTGAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CAGCTTCTGTTGTGTTGGCTTCATCAAAGAACAAGATaGTATCCAGCTTGTGCTGGGCCTTATTGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: QLLLCWLHQRTR*YPACAGPYWRR
Trigger: CCTTCTCCAATAAGGCCCAGCACAAGCTGGATACCATCTTGTTCTTTGATGAAGCCAACACAACAGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GCAGGAATCTCAAAGAACTGGTGGTTAGCTGTGATGTaGCAGACAGTTTCATGGAGGGTCAAACACTCAGTC +
Preference number: 6 (lower is better)
Translates to: AGISKNWWLAVM*QTVSWRVKHSV
Trigger: GACTGAGTGTTTGACCCTCCATGAAACTGTCTGCAACATCACAGCTAACCACCAGTTCTTTGAGATTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CTGCCTTCCTCCGTGATGTTGTCTATGATTTTCTCATaGGTTCCACACAGTTCGAAGAGCTGCCTCACATCT +
Preference number: 6 (lower is better)
Translates to: LPSSVMLSMIFS*VPHSSKSCLTS
Trigger: AGATGTGAGGCAGCTCTTCGAACTGTGTGGAACCAATGAGAAAATCATAGACAACATCACGGAGGAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CTGGCCATTAAGATCATGAAGGTCACCACAAAGTTCTaGAAGCCCCGAAGTGTGTCTCCAGTAAAAGCTGAC +
Preference number: 6 (lower is better)
Translates to: LAIKIMKVTTKF*KPRSVSPVKAD
Trigger: GTCAGCTTTTACTGGAGACACACTTCGGGGCTTCAAGAACTTTGTGGTGACCTTCATGATCTTAATGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp ATACCAAACCTGCTGAACTTCTTGCTGGCCTTGTCCTaGCAGTCACAGAGTGTGGTCATTACAGCCACAAAT +
Preference number: 6 (lower is better)
Translates to: IPNLLNFLLALS*QSQSVVITATN
Trigger: ATTTGTGGCTGTAATGACCACACTCTGTGACTGCAAGGACAAGGCCAGCAAGAAGTTCAGCAGGTTTGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CTTGCTTTCCTTAATGAATTTGTTCACTGCCTCCAATaGCTTTGCTTCTGGATGGAGGCTGCCATTGGGGGA +
Preference number: 6 (lower is better)
Translates to: LAFLNEFVHCLQ*LCFWMEAAIGG
Trigger: TCCCCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAAATTCATTAAGGAAAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp GAACTGTATTCCACTCTCGAGACATTCTGGAACTGTTaGACCAGATCCCTTTGCAGAGCCAATATCTCAGGC +
Preference number: 6 (lower is better)
Translates to: ELYSTLETFWNC*TRSLCRANISG
Trigger: GCCTGAGATATTGGCTCTGCAAAGGGATCTGGTCAAACAGTTCCAGAATGTCTCGAGAGTGGAATACAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TTCCCTTTCAACAGTTCCTTTCTTGTACTATCGAGGATGCGGTTCTaGGCTTGCTGGAAAAACCCAGTGGACCTCATGCAGATTATGTCA +
Preference number: 6 (lower is better)
Translates to: FPFNSSFLVLSRMRF*ACWKNPVDLMQIMS
Trigger: TGACATAATCTGCATGAGGTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCGATAGTACAAGAAAGGAACTGTTGAAAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CGATCACACAAGATCTCTTTGATACAGCTTACAGCTTCTGTTGTGTaGGCTTCATCAAAGAACAAGATGGTATCCAGCTTGTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: RSHKISLIQLTASVV*ASSKNKMVSSLCWA
Trigger: GGCCCAGCACAAGCTGGATACCATCTTGTTCTTTGATGAAGCCAACACAACAGAAGCTGTAAGCTGTATCAAAGAGATCTTGTGTGATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp AGCAGGTTCATGTGGCTCTGCACCAGGATGAAGGACATCTCACTGTaGGACCTTGTGTTATTCAACACAAGAGAGATGTTCAGGAACTTA +
Preference number: 6 (lower is better)
Translates to: SRFMWLCTRMKDISL*DLVLFNTREMFRNL
Trigger: TAAGTTCCTGAACATCTCTCTTGTGTTGAATAACACAAGGTCCAACAGTGAGATGTCCTTCATCCTGGTGCAGAGCCACATGAACCTGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp CGCCATCTCTTCAGAATAGGTAAGTCGGACATAGGCTaGGCTAATGGAGAGCATGCGACTTTTAAACAAGCT +
Preference number: 6 (lower is better)
Translates to: RHLFRIGKSDIG*ANGEHATFKQA
Trigger: AGCTTGTTTAAAAGTCGCATGCTCTCCATTAGCTCAGCCTATGTCCGACTTACCTATTCTGAAGAGATGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GGCAGCAGTGCGCTTAGGACTTGGTTCTCATCTAGATaGGGCTCTGTCAATCGAATAATTTTTAAAGGGACC +
Preference number: 6 (lower is better)
Translates to: GSSALRTWFSSR*GSVNRIIFKGT
Trigger: GGTCCCTTTAAAAATTATTCGATTGACAGAGCCTCATCTAGATGAGAACCAAGTCCTAAGCGCACTGCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GACTTGCAAAAGATAGACGCCTCACAGTCTTTGAGCTaGCAGTTCAGAAACCAAGCAAAGTTCCGAAGCTCT +
Preference number: 6 (lower is better)
Translates to: DLQKIDASQSLS*QFRNQAKFRSS
Trigger: AGAGCTTCGGAACTTTGCTTGGTTTCTGAACTGTCAGCTCAAAGACTGTGAGGCGTCTATCTTTTGCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp GGCAAGTTATCAAAGTCAATGTTGAAGGGCACTCTCTaGAGCCTCAGCCCATCAAACAGTTCTTTGGTCATG +
Preference number: 6 (lower is better)
Translates to: GKLSKSMLKGTL*SLSPSNSSLVM
Trigger: CATGACCAAAGAACTGTTTGATGGGCTGAGGCTTCAGAGAGTGCCCTTCAACATTGACTTTGATAACTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp ACAGCTTCTTGGGTCAGAGGCCTTTTTCATCTCCTCTaGATCTTCCACTTCCATTTGTTCCTCTGCCAATTC +
Preference number: 6 (lower is better)
Translates to: TASWVRGLFHLL*IFHFHLFLCQF
Trigger: GAATTGGCAGAGGAACAAATGGAAGTGGAAGATTCAGAGGAGATGAAAAAGGCCTCTGACCCAAGAAGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp AACTGTATTCCACTCTCGAGACATTCTGGAACTGTTTaGCCAGATCCCTTTGCAGAGCCAATATCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: NCIPLSRHSGTV*PDPFAEPISQA
Trigger: TGCCTGAGATATTGGCTCTGCAAAGGGATCTGGTCAAACAGTTCCAGAATGTCTCGAGAGTGGAATACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp TCGGTCCCATTTTCGTGTAGCAGCTATTTTCCACACTaGGATGCAGCTGGACATGAGTATTTCTTCAGGGAA +
Preference number: 6 (lower is better)
Translates to: SVPFSCSSYFPH*DAAGHEYFFRE
Trigger: TTCCCTGAAGAAATACTCATGTCCAGCTGCATCTCAGTGTGGAAAATAGCTGCTACACGAAAATGGGACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS GCA 72 bp TTGCTTTCCTTAATGAATTTGTTCACTGCCTCCAATTaGTTTGCTTCTGGATGGAGGCTGCCATTGGGGGAA +
Preference number: 6 (lower is better)
Translates to: LLSLMNLFTASN*FASGWRLPLGE
Trigger: TTCCCCCAATGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAAATTCATTAAGGAAAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AGAGAGGATCTTGCTTTCCTTAATGAATTTGTTCACTaGCTCCAATTGCTTTGCTTCTGGATGGAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: REDLAFLNEFVH*LQLLCFWMEAA
Trigger: GGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAAATTCATTAAGGAAAGCAAGATCCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CCTTATCCTGCTTCTGACACACTGTTTCATAGGCCTTaGCAAAGGGTGCAAAATACCCACGGATTTTATCCT +
Preference number: 6 (lower is better)
Translates to: PYPASDTLFHRP*QRVQNTHGFYP
Trigger: AGGATAAAATCCGTGGGTATTTTGCACCCTTTGCCAAGGCCTATGAAACAGTGTGTCAGAAGCAGGATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp GCGGATGACAGGAGTCTGGTCAACAACATCATCAAATaGAGACAGAGACTTTGTGTGTTCACGATGTTTCTG +
Preference number: 6 (lower is better)
Translates to: ADDRSLVNNIIK*RQRLCVFTMFL
Trigger: CAGAAACATCGTGAACACACAAAGTCTCTGTCTCCATTTGATGATGTTGTTGACCAGACTCCTGTCATCCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TTCCTTTCTTGTACTATCGAGGATGCGGTTCTTGGCTaGCTGGAAAAACCCAGTGGACCTCATGCAGATTAT +
Preference number: 6 (lower is better)
Translates to: FLSCTIEDAVLG*LEKPSGPHADY
Trigger: ATAATCTGCATGAGGTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCGATAGTACAAGAAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp AGTGTGGTCATTACAGCCACAAATGGCCTGCAGGTCTaGAGGTTAGAGTCCTCTTCAAGACATTTGTCTAGT +
Preference number: 6 (lower is better)
Translates to: SVVITATNGLQV*RLESSSRHLSS
Trigger: ACTAGACAAATGTCTTGAAGAGGACTCTAACCTCAAGACCTGCAGGCCATTTGTGGCTGTAATGACCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TCATGTAGGTGCTCACCATCCACTGTCCGATCACACAAGATCTCTTaGATACAGCTTACAGCTTCTGTTGTGTTGGCTTCATCAAAGAAC +
Preference number: 6 (lower is better)
Translates to: SCRCSPSTVRSHKIS*IQLTASVVLASSKN
Trigger: GTTCTTTGATGAAGCCAACACAACAGAAGCTGTAAGCTGTATCAAAGAGATCTTGTGTGATCGGACAGTGGATGGTGAGCACCTACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CATCTGATGTTAGGATCAGAGAGGATCTTGCTTTCCTTAATGAATTaGTTCACTGCCTCCAATTGCTTTGCTTCTGGATGGAGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: HLMLGSERILLSLMN*FTASNCFASGWRLP
Trigger: TGGCAGCCTCCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAAATTCATTAAGGAAAGCAAGATCCTCTCTGATCCTAACATCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp TGGTCATTGTCCAGGGCCCTCCAGAGTTCCTGTAGATaGTTCATGAAGTCAGAGAAATTTGTTCTTTCATCC +
Preference number: 6 (lower is better)
Translates to: WSLSRALQSSCR*FMKSEKFVLSS
Trigger: GGATGAAAGAACAAATTTCTCTGACTTCATGAATCATCTACAGGAACTCTGGAGGGCCCTGGACAATGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp ACCCACTCCTTTAAACTGCGGACCTGGTTCTCTTCTTaGTTGTTTAGAAGAACATGGAGACGCATCTTAGAT +
Preference number: 6 (lower is better)
Translates to: THSFKLRTWFSS*LFRRTWRRILD
Trigger: ATCTAAGATGCGTCTCCATGTTCTTCTAAACAAGCAAGAAGAGAACCAGGTCCGCAGTTTAAAGGAGTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp AGATGCTTCAGTTCACGTAGCAGAAGAGTTTCAAAATaGTTCTCCCAGTTGTTCCTGCATCCTTTGGTTGAC +
Preference number: 6 (lower is better)
Translates to: RCFSSRSRRVSK*FSQLFLHPLVD
Trigger: GTCAACCAAAGGATGCAGGAACAACTGGGAGAAGCATTTTGAAACTCTTCTGCTACGTGAACTGAAGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp AGCAGTTTTAACAGCACAGAGCGGATGACAGGAGTCTaGTCAACAACATCATCAAATGGAGACAGAGACTTT +
Preference number: 6 (lower is better)
Translates to: SSFNSTERMTGV*STTSSNGDRDF
Trigger: AAAGTCTCTGTCTCCATTTGATGATGTTGTTGACCAGACTCCTGTCATCCGCTCTGTGCTGTTAAAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp AAGGGACCGTCTCGTCACGTAGCTTTGCTTTTAGTTTaGTATGCAGTGTGTTCACGTAGAGAGACTTTCCAA +
Preference number: 6 (lower is better)
Translates to: KGPSRHVALLLV*YAVCSRRETFQ
Trigger: TTGGAAAGTCTCTCTACGTGAACACACTGCATACAAAACTAAAAGCAAAGCTACGTGACGAGACGGTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp ACGAAGTCTTTTGTTCCCTGTGTTTTGTTGATTTCATaGATGGCAGTATACTTGGCAGAGGCTACGAGCTGC +
Preference number: 6 (lower is better)
Translates to: TKSFVPCVLLIS*MAVYLAEATSC
Trigger: GCAGCTCGTAGCCTCTGCCAAGTATACTGCCATCAATGAAATCAACAAAACACAGGGAACAAAAGACTTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CACTCCTTTAAACTGCGGACCTGGTTCTCTTCTTGCTaGTTTAGAAGAACATGGAGACGCATCTTAGATTCC +
Preference number: 6 (lower is better)
Translates to: HSFKLRTWFSSC*FRRTWRRILDS
Trigger: GGAATCTAAGATGCGTCTCCATGTTCTTCTAAACAAGCAAGAAGAGAACCAGGTCCGCAGTTTAAAGGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp CTGCAGGTCTTGAGGTTAGAGTCCTCTTCAAGACATTaGTCTAGTAAGGAGACATATGTGGTTACCAGTGGA +
Preference number: 6 (lower is better)
Translates to: LQVLRLESSSRH*SSKETYVVTSG
Trigger: TCCACTGGTAACCACATATGTCTCCTTACTAGACAAATGTCTTGAAGAGGACTCTAACCTCAAGACCTGCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TTTCAACAGTTCCTTTCTTGTACTATCGAGGATGCGGTTCTTGGCTaGCTGGAAAAACCCAGTGGACCTCATGCAGATTATGTCATCATA +
Preference number: 6 (lower is better)
Translates to: FQQFLSCTIEDAVLG*LEKPSGPHADYVII
Trigger: TATGATGACATAATCTGCATGAGGTCCACTGGGTTTTTCCAGCAAGCCAAGAACCGCATCCTCGATAGTACAAGAAAGGAACTGTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp CGCTGCATGTTGCTGAAGACCTCTGAAAACTTCTCCACTTCTGTATaGCTGTTGTGGTCTTTCTTTCCAGACATGAGCATCAGCTTATTT +
Preference number: 6 (lower is better)
Translates to: RCMLLKTSENFSTSV*LLWSFFPDMSISLF
Trigger: AAATAAGCTGATGCTCATGTCTGGAAAGAAAGACCACAACAGCAATACAGAAGTGGAGAAGTTTTCAGAGGTCTTCAGCAACATGCAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp ATCCCACATCGGAACCGCATTTCAATGGCCAGGATCTTAAGCATATaGTCTGTGGTAAGTTCATATGTTTCATCAGGATCAATAGGCCAC +
Preference number: 6 (lower is better)
Translates to: IPHRNRISMARILSI*SVVSSYVSSGSIGH
Trigger: GTGGCCTATTGATCCTGATGAAACATATGAACTTACCACAGACAATATGCTTAAGATCCTGGCCATTGAAATGCGGTTCCGATGTGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp TGTCCAGGGCCCTCCAGAGTTCCTGTAGATGATTCATaGAGTCAGAGAAATTTGTTCTTTCATCCATCTTGT +
Preference number: 6 (lower is better)
Translates to: CPGPSRVPVDDS*SQRNLFFHPSC
Trigger: ACAAGATGGATGAAAGAACAAATTTCTCTGACTTCATGAATCATCTACAGGAACTCTGGAGGGCCCTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS TCA 72 bp CATGAGTATTTCTTCAGGGAACTGGGACTCCACTTCTaGAAGGATGTCACTGTCTTTAGTCTCCATGTAACT +
Preference number: 6 (lower is better)
Translates to: HEYFFRELGLHF*KDVTVFSLHVT
Trigger: AGTTACATGGAGACTAAAGACAGTGACATCCTTTCAGAAGTGGAGTCCCAGTTCCCTGAAGAAATACTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS GCA 72 bp AGTCTTTGGTGCTGTGTGCTGAGCTCCTCTTTGTATTaGACATCAATTTCCCGAAATAGCTCTTTGTTCAGT +
Preference number: 6 (lower is better)
Translates to: SLWCCVLSSSLY*TSISRNSSLFS
Trigger: ACTGAACAAAGAGCTATTTCGGGAAATTGATGTGCAATACAAAGAGGAGCTCAGCACACAGCACCAAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
ENSMUST00000172235.2
CDS CCA 72 bp GAACAGGATCTCTCTCAAAAGTATGTGTGCTGTCACTaGATTCATGGAGAAACTTGTCGAGCTCCTTTAAGA +
Preference number: 6 (lower is better)
Translates to: EQDLSQKYVCCH*IHGETCRAPLR
Trigger: TCTTAAAGGAGCTCGACAAGTTTCTCCATGAATCCAGTGACAGCACACATACTTTTGAGAGAGATCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TTGAGAGTGGATTATTTCAATGTTTCCAAAATCCACTaGCACAAGGTGTTTCACTCTTCCGAGCTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: LRVDYFNVSKIH*HKVFHSSELPQ
Trigger: CTGAGGCAGCTCGGAAGAGTGAAACACCTTGTGCAAGTGGATTTTGGAAACATTGAAATAATCCACTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TGCAGTTTTATGAAGACATGTACAAGCCGCTGCATGTaGCTGAAGACCTCTGAAAACTTCTCCACTTCTGTA +
Preference number: 6 (lower is better)
Translates to: CSFMKTCTSRCM*LKTSENFSTSV
Trigger: TACAGAAGTGGAGAAGTTTTCAGAGGTCTTCAGCAACATGCAGCGGCTTGTACATGTCTTCATAAAACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TCTGGTCAACAACATCATCAAATGGAGACAGAGACTTaGTGTGTTCACGATGTTTCTGGGAAGCATCTCTCA +
Preference number: 6 (lower is better)
Translates to: SGQQHHQMETET*CVHDVSGKHLS
Trigger: TGAGAGATGCTTCCCAGAAACATCGTGAACACACAAAGTCTCTGTCTCCATTTGATGATGTTGTTGACCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp AAGACCTCTGAAAACTTCTCCACTTCTGTATTGCTGTaGTGGTCTTTCTTTCCAGACATGAGCATCAGCTTA +
Preference number: 6 (lower is better)
Translates to: KTSENFSTSVLL*WSFFPDMSISL
Trigger: TAAGCTGATGCTCATGTCTGGAAAGAAAGACCACAACAGCAATACAGAAGTGGAGAAGTTTTCAGAGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp AGCCCATCAAACAGTTCTTTGGTCATGACGTCTTTTTaGATGACCTTACCATTTGAGGGATTGATGGCATCA +
Preference number: 6 (lower is better)
Translates to: SPSNSSLVMTSF*MTLPFEGLMAS
Trigger: TGATGCCATCAATCCCTCAAATGGTAAGGTCATCAAAAAAGACGTCATGACCAAAGAACTGTTTGATGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 72 bp TTAGGATCAGAGAGGATCTTGCTTTCCTTAATGAATTaGTTCACTGCCTCCAATTGCTTTGCTTCTGGATGG +
Preference number: 6 (lower is better)
Translates to: LGSERILLSLMN*FTASNCFASGW
Trigger: CCATCCAGAAGCAAAGCAATTGGAGGCAGTGAACAAATTCATTAAGGAAAGCAAGATCCTCTCTGATCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp ATGCGCTCATCTTGGCTGATAAGAGCATTTATAGCTGGCAAGTTTTaGTCAAGATGCTTCAGTTCACGTAGCAGAAGAGTTTCAAAATGC +
Preference number: 6 (lower is better)
Translates to: MRSSWLIRAFIAGKF*SRCFSSRSRRVSKC
Trigger: GCATTTTGAAACTCTTCTGCTACGTGAACTGAAGCATCTTGACAAAAACTTGCCAGCTATAAATGCTCTTATCAGCCAAGATGAGCGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp ATGTTGCTGAAGACCTCTGAAAACTTCTCCACTTCTGTATTGCTGTaGTGGTCTTTCTTTCCAGACATGAGCATCAGCTTATTTAAAAGT +
Preference number: 6 (lower is better)
Translates to: MLLKTSENFSTSVLL*WSFFPDMSISLFKS
Trigger: ACTTTTAAATAAGCTGATGCTCATGTCTGGAAAGAAAGACCACAACAGCAATACAGAAGTGGAGAAGTTTTCAGAGGTCTTCAGCAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CAA 90 bp TGCTTCAGTTCACGTAGCAGAAGAGTTTCAAAATGCTTCTCCCAGTaGTTCCTGCATCCTTTGGTTGACAATTCTGCATTAAAATTTAAC +
Preference number: 6 (lower is better)
Translates to: CFSSRSRRVSKCFSQ*FLHPLVDNSALKFN
Trigger: GTTAAATTTTAATGCAGAATTGTCAACCAAAGGATGCAGGAACAACTGGGAGAAGCATTTTGAAACTCTTCTGCTACGTGAACTGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS CCA 72 bp CCTCAGAGATATCTACAGAATAGCTGTTGTCTTCATTaGAAAACTTTTGCACCGTGTAGACCATGTTATTGT +
Preference number: 6 (lower is better)
Translates to: PQRYLQNSCCLH*KTFAPCRPCYC
Trigger: ACAATAACATGGTCTACACGGTGCAAAAGTTTTCCAATGAAGACAACAGCTATTCTGTAGATATCTCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10
CDS GCA 72 bp ATAAGAGCATTTATAGCTGGCAAGTTTTTGTCAAGATaGTTCAGTTCACGTAGCAGAAGAGTTTCAAAATGC +
Preference number: 6 (lower is better)
Translates to: IRAFIAGKFLSR*FSSRSRRVSKC
Trigger: GCATTTTGAAACTCTTCTGCTACGTGAACTGAAGCATCTTGACAAAAACTTGCCAGCTATAAATGCTCTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093902.12
ENSMUST00000131035.10