Pregenerated sensors for RNF212B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000112858Ensembl transcript IDs: ENSMUST00000218311.2, ENSMUST00000219350.2, ENSMUST00000219496.2, ENSMUST00000219519.3, ENSMUST00000220122.2, ENSMUST00000220208.2, ENSMUST00000220403.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGACACTaGAGGCCAACCTTGAGCATTATGCACAGAGCAGACCTGGAAGAG | + |
|
Preference number: 1 (lower is better) Translates to: TRNQQVPIAPERTGH*RPTLSIMHRADLEE Trigger: CTCTTCCAGGTCTGCTCTGTGCATAATGCTCAAGGTTGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR GCA 90 bp | AGTCAGTGTAAGAGTCTCCAGGAGTGCTCCTTACGTGCAGACCTCTaGTTCCCTGTTCCACGTGACCCATGCCAGCCACTGTGTAAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: SQCKSLQECSLRADL*FPVPRDPCQPLCKG Trigger: TCCCTTACACAGTGGCTGGCATGGGTCACGTGGAACAGGGAAGCAGAGGTCTGCACGTAAGGAGCACTCCTGGAGACTCTTACACTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219496.2 |
||
| 3UTR GCA 90 bp | TTTCAGTGTAAGAGTCTCCAGGAGTGCTCCTTACGTGCAGACCTCTaGTTCCCTGTTCCACGTGACCCATGCCAGCCACTGTGTAAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: FQCKSLQECSLRADL*FPVPRDPCQPLCKG Trigger: TCCCTTACACAGTGGCTGGCATGGGTCACGTGGAACAGGGAAGCAGAGGTCTGCACGTAAGGAGCACTCCTGGAGACTCTTACACTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR GCA 90 bp | GAGTTGAAGCTGGAGAAGGGGTTTCAGTGTAAGAGTCTCCAGGAGTaGTCCTTACGTGCAGACCTCTGCTTCCCTGTTCCACGTGACCCA | + |
|
Preference number: 1 (lower is better) Translates to: ELKLEKGFQCKSLQE*SLRADLCFPVPRDP Trigger: TGGGTCACGTGGAACAGGGAAGCAGAGGTCTGCACGTAAGGAGCACTCCTGGAGACTCTTACACTGAAACCCCTTCTCCAGCTTCAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR TCA 90 bp | CTGTCCGGAGGAGGCAGACGAAGGTCTGTAAGAGAGGCTATGAGTTaGAGCTGGAGAAGGGGTTTCAGTGTAAGAGTCTCCAGGAGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: LSGGGRRRSVREAMS*SWRRGFSVRVSRSA Trigger: AGCACTCCTGGAGACTCTTACACTGAAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCTTACAGACCTTCGTCTGCCTCCTCCGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR CCA 90 bp | GGGATGGACTCCATAGAAGAAGAGCGACTGACTACTTGGCTGCTATaGTGGGAACTGGGTCGTGGAGCAACTGACTGTGATGGGGAAGTA | + |
|
Preference number: 1 (lower is better) Translates to: GMDSIEEERLTTWLL*WELGRGATDCDGEV Trigger: TACTTCCCCATCACAGTCAGTTGCTCCACGACCCAGTTCCCACCATAGCAGCCAAGTAGTCAGTCGCTCTTCTTCTATGGAGTCCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR CCA 90 bp | AGGCTTGTAAGCACCCTTCACGGTGCTCTGTTCAGTTTCTTGAGTTaGGAGGACAGGGCCTGTCGCTGTCTGATGTGTATCAATGTGAGT | + |
|
Preference number: 1 (lower is better) Translates to: RLVSTLHGALFSFLS*EDRACRCLMCINVS Trigger: ACTCACATTGATACACATCAGACAGCGACAGGCCCTGTCCTCCCAACTCAAGAAACTGAACAGAGCACCGTGAAGGGTGCTTACAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR CCA 90 bp | CTTGAGCATTATGCACAGAGCAGACCTGGAAGAGGGATGTCTATCTaGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCT | + |
|
Preference number: 1 (lower is better) Translates to: LEHYAQSRPGRGMSI*KCSIRLSWLVPSAS Trigger: AGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCATAATGCTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR CCA 90 bp | ATGGACTCCATAGAAGAAGAGCGACTGACTACTTGGCTGCTATGGTaGGAACTGGGTCGTGGAGCAACTGACTGTGATGGGGAAGTAATA | + |
|
Preference number: 1 (lower is better) Translates to: MDSIEEERLTTWLLW*ELGRGATDCDGEVI Trigger: TATTACTTCCCCATCACAGTCAGTTGCTCCACGACCCAGTTCCCACCATAGCAGCCAAGTAGTCAGTCGCTCTTCTTCTATGGAGTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR TCA 90 bp | CAGGAGGAAGCTTGCGAAAGCAGTCAGAGTCTCCTTTCAGGGTCCTaGAATTATAAACATCTGGTGGCAGTCAGTGTAAGAGTCTCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: QEEACESSQSLLSGS*NYKHLVAVSVRVSR Trigger: CCTGGAGACTCTTACACTGACTGCCACCAGATGTTTATAATTTCAGGACCCTGAAAGGAGACTCTGACTGCTTTCGCAAGCTTCCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219496.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCATCCATCCGTCTTTCCTaGCTAGTCCCATCTGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TRNQQVPIAPERTGHCRPSIRLS*LVPSAS Trigger: AGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGA...TGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCAACCAGGAAGACTCTCTaGTGTGGTTCTGCTTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: TRNQQVPIAPERTGHCRPTRKTL*CGSAFP Trigger: AGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGT...TGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR CAA 90 bp | CCTGTCCGGAGGAGGCAGACGAAGGTCTGTAAGAGAGGCTATGAGTaGAAGCTGGAGAAGGGGTTTCAGTGTAAGAGTCTCCAGGAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PVRRRQTKVCKRGYE*KLEKGFQCKSLQEC Trigger: GCACTCCTGGAGACTCTTACACTGAAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCTTACAGACCTTCGTCTGCCTCCTCCGGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR-3UTR TCA 90 bp | CCACTGAAGAATGGCCTAAAAGAAACCCCCTGTCCGGAGGAGGCAGACGAAGGTCAGAATTGTTGGGAGTaGGGACTCTTGTGTGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: PLKNGLKETPCPEEADEGQNCWE*GLLCGL Trigger: CAGGCCACACAAGAGTCCTCACTCCCAACAATTCTG...ACCTTCGTCTGCCTCCTCCGGACAGGGGGTTTCTTTTAGGCCATTCTTCAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGCACAGAGCAGACCTGGAAGAGGGATGTCTATCTGGAAATGTTCCATCCGTCCTTCCCTGTTCCACGTaGCCCATGCCAGCCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: MHRADLEEGCLSGNVPSVLPCST*PMPATV Trigger: CACAGTGGCTGGCATGGGTCACGTGGAACAGGGAAG...GACGGATGGAACATTTCCAGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219496.2 ENSMUST00000220122.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAGTGAGGACTCTGGCCAGGAGGAAGCTTaGGAAAGCAGTCAGAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LWCGSAFPPTRIVGSEDSGQEEA*ESSQSL Trigger: GAGACTCTGACTGCTTTCGCAAGCTTCCTCCTGGCC...AGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCAACCTTGAGCATTATGCACGAAGACTCTCTGGTGTaGTTCTGCTTTCCCTCCGAC | + |
|
Preference number: 2 (lower is better) Translates to: PIAPERTGHCRPTLSIMHEDSLV*FCFPSD Trigger: GTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTC...GTGCATAATGCTCAAGGTTGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTCTGGCCGCCATTTCCTaGGCCTCCTTCACAGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: IWKCSIRLSWLVPSASVGLAAIS*ASFTAA Trigger: AGCAGCTGTGAAGGAGGCCCAGGAAATGGCGGCCAG...ACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR CAA 90 bp | CAAGTGCCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCAACCTaGAGCATTATGCACAGAGCAGACCTGGAAGAGGGATGTCTATCT | + |
|
Preference number: 2 (lower is better) Translates to: QVPIAPERTGHCRPT*SIMHRADLEEGCLS Trigger: AGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCATAATGCTCAAGGTTGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGTTACGTGCAGACCTCTaGTTCCCTGTTCCACGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: TRKTLWCGSAFPPTRIVGLRADL*FPVPRD Trigger: GTCACGTGGAACAGGGAAGCAGAGGTCTGCACGTAA...CCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219496.2 ENSMUST00000220122.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGGCCAGGAGGAAGCTTaGGAAAGCAGTCAGAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QENKLQTETRNQQVPIAPGQEEA*ESSQSL Trigger: GAGACTCTGACTGCTTTCGCAAGCTTCCTCCTGGCC...AGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAAGTTGGAAACCAGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCTCCGACGAAGACTCTCTGGTGTaGTTCTGCTTTCCCTCCGAC | + |
|
Preference number: 2 (lower is better) Translates to: LEVGNQEDSLVWFCFPSDEDSLV*FCFPSD Trigger: GTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTC...GTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGTTTCCAACTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTTCCATCCGTCTTTCCTaGCTAGTCCCATCTGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: KLQTETRNQQVPIAPERTSIRLS*LVPSAS Trigger: AGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGA...AGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAGTGAGGACTCTTGTGCCACGGGTCGAGGTGTaGTTAACCTGCTTCCATAGT | + |
|
Preference number: 2 (lower is better) Translates to: GVVLLSLRPELLGVRTLVPRVEV*LTCFHS Trigger: ACTATGGAAGCAGGTTAACCACACCTCGACCCGTGG...CACAAGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCCCTCCGACCAGAATTGTTGGGAGTGAGGACTCTTGTGTGGCCTGAATCCAGAGAGGCTATGAGTTaGAGCTGGAGAAGGGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSLRPELLGVRTLVWPESREAMS*SWRRGF Trigger: GAAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCT...GGATTCAGGCCACACAAGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTAGAGAGGCTATGAGTTaGAGCTGGAGAAGGGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KLQTETRNQQVPIAPERTREAMS*SWRRGF Trigger: GAAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCT...AGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAACCAGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGCCAGGAGGAAGCTTaGGAAAGCAGTCAGAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: ETRKTLWCGSAFPPTRIVGQEEA*ESSQSL Trigger: GAGACTCTGACTGCTTTCGCAAGCTTCCTCCTGGCC...AACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAAACCAGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTGAAGACTCTCTGGTGTaGTTCTGCTTTCCCTCCGAC | + |
|
Preference number: 2 (lower is better) Translates to: GNQEDSLVWFCFPSDQNCEDSLV*FCFPSD Trigger: GTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTC...ACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAGTGAGGACTCTTGTGACCAGGAAGACTCTCTaGTGTGGTTCTGCTTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GVVLLSLRPELLGVRTLVTRKTL*CGSAFP Trigger: AGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGT...CACAAGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR CAA 90 bp | AAGGCTTGTAAGCACCCTTCACGGTGCTCTGTTCAGTTTCTTGAGTaGGGAGGACAGGGCCTGTCGCTGTCTGATGTGTATCAATGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: KACKHPSRCSVQFLE*GGQGLSLSDVYQCE Trigger: CTCACATTGATACACATCAGACAGCGACAGGCCCTGTCCTCCCAACTCAAGAAACTGAACAGAGCACCGTGAAGGGTGCTTACAAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTAGAGAGGCTATGAGTTaGAGCTGGAGAAGGGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QENKLQTETRNQQVPIAPREAMS*SWRRGF Trigger: GAAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCT...AGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAGTGAGGACTCTAAACAAGCTGCAGACTaGAACCAGGAACCAGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LWCGSAFPPTRIVGSEDSKQAAD*NQEPAS Trigger: ACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTT...AGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAAAACAAGCTGCAGACTaGAACCAGGAACCAGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NKLQTETRNQQVPIAPERKQAAD*NQEPAS Trigger: ACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTT...TCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAACCAGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGGAGAGAACTGGACACTaGAGGCCAACCTTGAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: WKPGRLSGVVLLSLRPELERTGH*RPTLSI Trigger: AATGCTCAAGGTTGGCCTGCAGTGTCCAGTTCTCTC...CAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGGAAGTTGGAAACCAGGAAGACGAAGACTCTCTGGTGTaGTTCTGCTTTCCCTCCGAC | + |
|
Preference number: 2 (lower is better) Translates to: SASVGRTSVGLEVGNQEDEDSLV*FCFPSD Trigger: GTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTC...GTCTTCCTGGTTTCCAACTTCCAGTCCTACAGACGTTCTACCAACAGAGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATGTCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTGCACAGAGCAGACCTaGAAGAGGGATGTCTATCTG | + |
|
Preference number: 2 (lower is better) Translates to: GMSIWKCSIRLSWLVPSACTEQT*KRDVYL Trigger: CAGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCA...GGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR CAA 90 bp | CCTGTCCGGAGGAGGCAGACGAAGGTCTGTAAGAGAGGCTATGAGTaGAAGCTGGAGAAGGGGTTTCTGGAAAGCATAAATATGAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: PVRRRQTKVCKRGYE*KLEKGFLESINMNQ Trigger: CTGGTTCATATTTATGCTTTCCAGAAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCTTACAGACCTTCGTCTGCCTCCTCCGGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAACCAGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTAGAGAGGCTATGAGTTaGAGCTGGAGAAGGGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ETRKTLWCGSAFPPTRIVREAMS*SWRRGF Trigger: GAAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCT...AACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTAAACAAGCTGCAGACTaGAACCAGGAACCAGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: CSIRLSWLVPSASVGRTSKQAAD*NQEPAS Trigger: ACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTT...AGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCAACCTTGAGCATTATGCACTTCAAGAAAACAAGCTaGAGACTGAAACCAGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: PIAPERTGHCRPTLSIMHFKKTS*RLKPGT Trigger: GGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTGAA...GTGCATAATGCTCAAGGTTGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCATTATGCACAGAGCAGACCTGGAAGAGGGATGTCTATCTGGAAATGTTCCGAAGACTCTCTGGTGTaGTTCTGCTTTCCCTCCGAC | + |
|
Preference number: 2 (lower is better) Translates to: EHYAQSRPGRGMSIWKCSEDSLV*FCFPSD Trigger: GTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTC...GGAACATTTCCAGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCATAATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGGAAGTTGGAAACCAGGAAGACACCAGGAAGACTCTCTaGTGTGGTTCTGCTTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SASVGRTSVGLEVGNQEDTRKTL*CGSAFP Trigger: AGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGT...GTCTTCCTGGTTTCCAACTTCCAGTCCTACAGACGTTCTACCAACAGAGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTTCCATCCGTCTTTCCTaGCTAGTCCCATCTGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SIWKCSIRLSWLVPSASVSIRLS*LVPSAS Trigger: AGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGA...AACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | CCACTGAAGAATGGCCTAAAAGAAACCCCCTGTCCGGAGGAGGCAGACGAAGGTAGAGGGATGTCTATCTaGAAATGTTCCATCCGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PLKNGLKETPCPEEADEGRGMSI*KCSIRL Trigger: AAGACGGATGGAACATTTCCAGATAGACATCCCTCT...ACCTTCGTCTGCCTCCTCCGGACAGGGGGTTTCTTTTAGGCCATTCTTCAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGGAAGTTGGAAACCAGGAAGACTGCACAGAGCAGACCTaGAAGAGGGATGTCTATCTG | + |
|
Preference number: 2 (lower is better) Translates to: SASVGRTSVGLEVGNQEDCTEQT*KRDVYL Trigger: CAGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCA...GTCTTCCTGGTTTCCAACTTCCAGTCCTACAGACGTTCTACCAACAGAGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGGAAGTTGGAAACCAGGAAGACAAACAAGCTGCAGACTaGAACCAGGAACCAGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SASVGRTSVGLEVGNQEDKQAAD*NQEPAS Trigger: ACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTT...GTCTTCCTGGTTTCCAACTTCCAGTCCTACAGACGTTCTACCAACAGAGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAATGGCGCCCAGCATCAAAGGCCAGGAGGAAGCTTGCGAAAGCAGTCAGAGTCTCCTTTCAGGGTCCTaGAATTATAAACATCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KMAPSIKGQEEACESSQSLLSGS*NYKHLV Trigger: CACCAGATGTTTATAATTTCAGGACCCTGAAAGGAG...ACTCTGACTGCTTTCGCAAGCTTCCTCCTGGCCTTTGATGCTGGGCGCCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 |
||
| 3UTR-3UTR TCA 90 bp | GGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAGTGAGGACTCTTGTGCTCCTTTCAGGGTCCTaGAATTATAAACATCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GVVLLSLRPELLGVRTLVLLSGS*NYKHLV Trigger: CACCAGATGTTTATAATTTCAGGACCCTGAAAGGAG...CACAAGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 |
||
| 3UTR-3UTR TCA 90 bp | GAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAAGGAGAGACATCAGTaGAAAGAGAGAATCAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: ENKLQTETRNQQVPIAPEKERHQ*KERIRA Trigger: AGCTCTGATTCTCTCTTTTCACTGATGTCTCTCCTT...CTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAGAATGGCCTAAAAGAAACCCCCTGTCCGGAGGAGGCAGACGAAGGTCTGTAAAGGAGAGACATCAGTaGAAAGAGAGAATCAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: EEWPKRNPLSGGGRRRSVKERHQ*KERIRA Trigger: AGCTCTGATTCTCTCTTTTCACTGATGTCTCTCCTT...TACAGACCTTCGTCTGCCTCCTCCGGACAGGGGGTTTCTTTTAGGCCATTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTTGCACAGAGCAGACCTaGAAGAGGGATGTCTATCTG | + |
|
Preference number: 2 (lower is better) Translates to: SIWKCSIRLSWLVPSASVCTEQT*KRDVYL Trigger: CAGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCA...AACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGCTATGAGTTGAAGCTGGAGAAGGGGTTTCTGGAAAGCATAAATATGAACGTTCCACGTGACCCATaGCAGCCACTGTGTAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: RGYELKLEKGFLESINMNVPRDP*QPLCKG Trigger: TCCCTTACACAGTGGCTGGCATGGGTCACGTGGAAC...GTTCATATTTATGCTTTCCAGAAACCCCTTCTCCAGCTTCAACTCATAGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219496.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCGAGAGAACTGGACACTaGAGGCCAACCTTGAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: KITFKKTSCRLKPGTSKCERTGH*RPTLSI Trigger: AATGCTCAAGGTTGGCCTGCAGTGTCCAGTTCTCTC...GCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGGAAGTTGGAAACCAGGAAGACTTCAAGAAAACAAGCTaGAGACTGAAACCAGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: SASVGRTSVGLEVGNQEDFKKTS*RLKPGT Trigger: GGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTGAA...GTCTTCCTGGTTTCCAACTTCCAGTCCTACAGACGTTCTACCAACAGAGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTCTAGGACAAGAGAAATaGGGCCAAAGATTTTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: SIWKCSIRLSWLVPSASVLGQEK*GQRFST Trigger: TGTGGAAAATCTTTGGCCCCATTTCTCTTGTCCTAG...AACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGCTATGAGTTGAAGCTGGAGAAGGGGTTTCTGGAAAGCATAAATATGAACAAACAAGCTGCAGACTaGAACCAGGAACCAGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RGYELKLEKGFLESINMNKQAAD*NQEPAS Trigger: ACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTT...GTTCATATTTATGCTTTCCAGAAACCCCTTCTCCAGCTTCAACTCATAGCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCATTATGCACAGAGCAGACCTGGAAGAGGGATGTCTATCTGGAAATGTTCCAAAGGAGAGACATCAGTaGAAAGAGAGAATCAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SIMHRADLEEGCLSGNVPKERHQ*KERIRA Trigger: AGCTCTGATTCTCTCTTTTCACTGATGTCTCTCCTT...TGGAACATTTCCAGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCATAATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCTCTCTAAGATGGTACTaGAAAGTGGAGCTGAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: KITFKKTSCRLKPGTSKCSLRWY*KVELKE Trigger: CTCCTTCAGCTCCACTTTTCAGTACCATCTTAGAGA...GCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGAAAGACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCAAAACAAGCTGCAGACTaGAACCAGGAACCAGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: ERKTCKITFKKTSCRLKPKQAAD*NQEPAS Trigger: ACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTT...TGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACATGTCTTTCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGCTATGAGTTGAAGCTGGAGAAGGGGTTTCTGGAAAGCATAAATATGAACTTCAAGAAAACAAGCTaGAGACTGAAACCAGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: RGYELKLEKGFLESINMNFKKTS*RLKPGT Trigger: GGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTGAA...GTTCATATTTATGCTTTCCAGAAACCCCTTCTCCAGCTTCAACTCATAGCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCAAGGCCAGGAGGAAGCTaGCGAAAGCAGTCAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TRNQQVPIAPERTGHCRPRPGGS*RKQSES Trigger: AGACTCTGACTGCTTTCGCAAGCTTCCTCCTGGCCT...TGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR GCA 72 bp | AAGAGTCTCCAGGAGTGCTCCTTACGTGCAGACCTCTaGTTCCCTGTTCCACGTGACCCATGCCAGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: KSLQECSLRADL*FPVPRDPCQPL Trigger: CAGTGGCTGGCATGGGTCACGTGGAACAGGGAAGCAGAGGTCTGCACGTAAGGAGCACTCCTGGAGACTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219496.2 ENSMUST00000220122.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCACACTGCAGGCCAACCTaGAGCATTATGCACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TRNQQVPIAPERTGHCRPHCRPT*SIMHRA Trigger: TGCTCTGTGCATAATGCTCAAGGTTGGCCTGCAGTG...TGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCTGTCCGGAGGAGGCAGACGAAGGTCTGTAAGAGAGGCTATGAGTTGAAGCTCCGACCAGAATTGTaGGGAGTGAGGACTCTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PPVRRRQTKVCKRGYELKLRPEL*GVRTLV Trigger: CACAAGAGTCCTCACTCCCAACAATTCTGGTCGGAG...CTTCAACTCATAGCCTCTCTTACAGACCTTCGTCTGCCTCCTCCGGACAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR GCA 72 bp | CAGCAAGTGCCCATAGCCCCTGAGAGAACTGGACACTaGAGGCCAACCTTGAGCATTATGCACAGAGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QQVPIAPERTGH*RPTLSIMHRAD Trigger: GTCTGCTCTGTGCATAATGCTCAAGGTTGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCACTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACTGAAGAATGGCCTAAAAGAAACCCCCTGTCCGGAGGAGGCAGACGAAGGTTCCCTCCGACCAGAATaGTTGGGAGTGAGGACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PLKNGLKETPCPEEADEGSLRPE*LGVRTL Trigger: AAGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGA...ACCTTCGTCTGCCTCCTCCGGACAGGGGGTTTCTTTTAGGCCATTCTTCAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCAACCTTGAGCATTATGCACTGCAGGCCAACCTaGAGCATTATGCACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VPIAPERTGHCRPTLSIMHCRPT*SIMHRA Trigger: TGCTCTGTGCATAATGCTCAAGGTTGGCCTGCAGTG...CATAATGCTCAAGGTTGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAATGGCCTAAAAGAAACCCCCTGTCCGGAGGAGGCAGACGAAGGTCTGTAGCTCTGTTCAGTTTCTaGAGTTGGGAGGACAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: EEWPKRNPLSGGGRRRSVALFSF*SWEDRA Trigger: GGCCCTGTCCTCCCAACTCAAGAAACTGAACAGAGC...TACAGACCTTCGTCTGCCTCCTCCGGACAGGGGGTTTCTTTTAGGCCATTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR GCA 72 bp | ACATCTGGTGGCAGTCAGTGTAAGAGTCTCCAGGAGTaGTCCTTACGTGCAGACCTCTGCTTCCCTGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TSGGSQCKSLQE*SLRADLCFPVP Trigger: TGGAACAGGGAAGCAGAGGTCTGCACGTAAGGAGCACTCCTGGAGACTCTTACACTGACTGCCACCAGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219496.2 |
||
| 3UTR GCA 72 bp | CTGGAGAAGGGGTTTCAGTGTAAGAGTCTCCAGGAGTaGTCCTTACGTGCAGACCTCTGCTTCCCTGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LEKGFQCKSLQE*SLRADLCFPVP Trigger: TGGAACAGGGAAGCAGAGGTCTGCACGTAAGGAGCACTCCTGGAGACTCTTACACTGAAACCCCTTCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR CCA 72 bp | AGCACCCTTCACGGTGCTCTGTTCAGTTTCTTGAGTTaGGAGGACAGGGCCTGTCGCTGTCTGATGTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: STLHGALFSFLS*EDRACRCLMCI Trigger: GATACACATCAGACAGCGACAGGCCCTGTCCTCCCAACTCAAGAAACTGAACAGAGCACCGTGAAGGGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR CCA 72 bp | GGGATGGACTCCATAGAAGAAGAGCGACTGACTACTTaGCTGCTATGGTGGGAACTGGGTCGTGGAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: GMDSIEEERLTT*LLWWELGRGAT Trigger: AGTTGCTCCACGACCCAGTTCCCACCATAGCAGCCAAGTAGTCAGTCGCTCTTCTTCTATGGAGTCCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTTCCCTCCGACCAGAATaGTTGGGAGTGAGGACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KLQTETRNQQVPIAPERTSLRPE*LGVRTL Trigger: AAGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGA...AGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGATCCCTCCGACCAGAATaGTTGGGAGTGAGGACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NKLQTETRNQQVPIAPERSLRPE*LGVRTL Trigger: AAGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGA...TCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAGTGAGGACTCACTGCAGGCCAACCTaGAGCATTATGCACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSGVVLLSLRPELLGVRTHCRPT*SIMHRA Trigger: TGCTCTGTGCATAATGCTCAAGGTTGGCCTGCAGTG...AGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR CCA 72 bp | GGACTGGAAGTTGGAAACCAGGAAGACTCTCTGGTGTaGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLEVGNQEDSLV*FCFPSDQNCWE Trigger: CTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGTTTCCAACTTCCAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR CCA 72 bp | ATAGAAGAAGAGCGACTGACTACTTGGCTGCTATGGTaGGAACTGGGTCGTGGAGCAACTGACTGTGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: IEEERLTTWLLW*ELGRGATDCDG Trigger: CCCATCACAGTCAGTTGCTCCACGACCCAGTTCCCACCATAGCAGCCAAGTAGTCAGTCGCTCTTCTTCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCGGAGGAGGCAGACGAAGGTCTGTAAGAGAGGCTATGAGTTGAAGCTGGAGAAGAGAGGCTATGAGTaGAAGCTGGAGAAGGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VRRRQTKVCKRGYELKLEKRGYE*KLEKGF Trigger: AAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCTT...CTCCAGCTTCAACTCATAGCCTCTCTTACAGACCTTCGTCTGCCTCCTCCGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCACGTGACCCATGCCAGCCACTGTGTAAGGGATGGACTCCATAGAAGAAGACTCCGACCAGAATTGTaGGGAGTGAGGACTCTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FHVTHASHCVRDGLHRRRLRPEL*GVRTLV Trigger: CACAAGAGTCCTCACTCCCAACAATTCTGGTCGGAG...TCTTCTTCTATGGAGTCCATCCCTTACACAGTGGCTGGCATGGGTCACGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219496.2 ENSMUST00000220122.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAGTGAGGACTCTTCTCCGACCAGAATTGTaGGGAGTGAGGACTCTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SGVVLLSLRPELLGVRTLLRPEL*GVRTLV Trigger: CACAAGAGTCCTCACTCCCAACAATTCTGGTCGGAG...AAGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAGTCTCCGACCAGAATTGTaGGGAGTGAGGACTCTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RKTLWCGSAFPPTRIVGSLRPEL*GVRTLV Trigger: CACAAGAGTCCTCACTCCCAACAATTCTGGTCGGAG...ACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGACTGGAAGTTGGAAACCAGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCCACTGCAGGCCAACCTaGAGCATTATGCACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VGLEVGNQEDSLVWFCFPHCRPT*SIMHRA Trigger: TGCTCTGTGCATAATGCTCAAGGTTGGCCTGCAGTG...GGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGTTTCCAACTTCCAGTCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAATGGCGCCCAGCATCAAAGGCCAGGAGGAAGCTTGCGAAAGCAGTCAGAGTAAGAGAGGCTATGAGTaGAAGCTGGAGAAGGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KMAPSIKGQEEACESSQSKRGYE*KLEKGF Trigger: AAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCTT...ACTCTGACTGCTTTCGCAAGCTTCCTCCTGGCCTTTGATGCTGGGCGCCATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGAAGAGAGGCTATGAGTaGAAGCTGGAGAAGGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RLSWLVPSASVGRTSVGLKRGYE*KLEKGF Trigger: AAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCTT...CAGTCCTACAGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTCCCTCCGACCAGAATaGTTGGGAGTGAGGACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VYLEMFHPSFLASPICLCSLRPE*LGVRTL Trigger: AAGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGA...ACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR TCA 72 bp | GGAGGCAGACGAAGGTCTGTAAGAGAGGCTATGAGTTaGAGCTGGAGAAGGGGTTTCAGTGTAAGAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GGRRRSVREAMS*SWRRGFSVRVS Trigger: GGAGACTCTTACACTGAAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCTTACAGACCTTCGTCTGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR CCA 72 bp | GACATCAGTGAAAAGAGAGAATCAGAGCTCCAAAAATaGCGCCCAGCATCAAAGGCCAGGAGGAAGCTTGCG | + |
|
Preference number: 3 (lower is better) Translates to: DISEKRESELQK*RPASKARRKLA Trigger: CGCAAGCTTCCTCCTGGCCTTTGATGCTGGGCGCCATTTTTGGAGCTCTGATTCTCTCTTTTCACTGATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR CCA 72 bp | TCCATAGAAGAAGAGCGACTGACTACTTGGCTGCTATaGTGGGAACTGGGTCGTGGAGCAACTGACTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SIEEERLTTWLL*WELGRGATDCD Trigger: ATCACAGTCAGTTGCTCCACGACCCAGTTCCCACCATAGCAGCCAAGTAGTCAGTCGCTCTTCTTCTATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| 3UTR TCA 72 bp | ACCAGAATTGTTGGGAGTGAGGACTCTTGTGTGGCCTaGATCCCCACTGAAGAATGGCCTAAAAGAAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: TRIVGSEDSCVA*IPTEEWPKRNP Trigger: GGGGTTTCTTTTAGGCCATTCTTCAGTGGGGATTCAGGCCACACAAGAGTCCTCACTCCCAACAATTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR CCA 72 bp | GGGATGTCTATCTGGAAATGTTCCATCCGTCTTTCCTaGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GMSIWKCSIRLS*LVPSASVGRTS Trigger: AGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAACCTTGAGCATTATGCACAGAGCAGACCTGGAAGAGGGATGTCTATCTGGAAAGAGAGGCTATGAGTaGAAGCTGGAGAAGGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PTLSIMHRADLEEGCLSGKRGYE*KLEKGF Trigger: AAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCTT...TCCAGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCATAATGCTCAAGGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCATTATGCACAGAGCAGACCTGGAAGAGGGATGTCTATCTGGAAATGTTCCACTCCGACCAGAATTGTaGGGAGTGAGGACTCTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SIMHRADLEEGCLSGNVPLRPEL*GVRTLV Trigger: CACAAGAGTCCTCACTCCCAACAATTCTGGTCGGAG...TGGAACATTTCCAGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCATAATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGGGATGTCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCAAGAGAGGCTATGAGTaGAAGCTGGAGAAGGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KRDVYLEMFHPSFLASPIKRGYE*KLEKGF Trigger: AAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCTT...GATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR TCA 72 bp | GCTTGCGAAAGCAGTCAGAGTCTCCTTTCAGGGTCCTaGAATTATAAACATCTGGTGGCAGTCAGTGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ACESSQSLLSGS*NYKHLVAVSVR Trigger: TCTTACACTGACTGCCACCAGATGTTTATAATTTCAGGACCCTGAAAGGAGACTCTGACTGCTTTCGCAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219496.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCTGTCCGGAGGAGGCAGACGAAGGTCTGTAAGAGAGGCTATGAGTTGAAGCTTCCCTGTTCCACGTaGCCCATGCCAGCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPVRRRQTKVCKRGYELKLPCST*PMPATV Trigger: CACAGTGGCTGGCATGGGTCACGTGGAACAGGGAAG...CTTCAACTCATAGCCTCTCTTACAGACCTTCGTCTGCCTCCTCCGGACAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGCAGGCCAACCTTGAGCATTATGCACAGAGCAGACCTGGAAGAGGGATGCTTCCCTGTTCCACGTaGCCCATGCCAGCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLQANLEHYAQSRPGRGMLPCST*PMPATV Trigger: CACAGTGGCTGGCATGGGTCACGTGGAACAGGGAAG...CATCCCTCTTCCAGGTCTGCTCTGTGCATAATGCTCAAGGTTGGCCTGCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAACCCCCTGTCCGGAGGAGGCAGACGAAGGTCTGTAAGAGAGGCTATGCTTCCCTGTTCCACGTaGCCCATGCCAGCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRNPLSGGGRRRSVREAMLPCST*PMPATV Trigger: CACAGTGGCTGGCATGGGTCACGTGGAACAGGGAAG...CATAGCCTCTCTTACAGACCTTCGTCTGCCTCCTCCGGACAGGGGGTTTCTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAGTGAGGACTCTCTGGCCGCCATTTCCTaGGCCTCCTTCACAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWCGSAFPPTRIVGSEDSLAAIS*ASFTAA Trigger: AGCAGCTGTGAAGGAGGCCCAGGAAATGGCGGCCAG...AGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCACCACGGGTCGAGGTGTaGTTAACCTGCTTCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRNQQVPIAPERTGHCRPPRVEV*LTCFHS Trigger: ACTATGGAAGCAGGTTAACCACACCTCGACCCGTGG...TGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTCTGGCCGCCATTTCCTaGGCCTCCTTCACAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QENKLQTETRNQQVPIAPLAAIS*ASFTAA Trigger: AGCAGCTGTGAAGGAGGCCCAGGAAATGGCGGCCAG...AGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | CTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGAACTTGGCTGCTATGGTaGGAACTGGGTCGTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQTETRNQQVPIAPERTGTWLLW*ELGRGA Trigger: TGCTCCACGACCCAGTTCCCACCATAGCAGCCAAGT...TCCAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCAACCTTGAGCATTATGTTACGTGCAGACCTCTaGTTCCCTGTTCCACGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPIAPERTGHCRPTLSIMLRADL*FPVPRD Trigger: GTCACGTGGAACAGGGAAGCAGAGGTCTGCACGTAA...CATAATGCTCAAGGTTGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | ATGCACAGAGCAGACCTGGAAGAGGGATGTCTATCTGGAAATGTTCCATCCGTCCTGGCCGCCATTTCCTaGGCCTCCTTCACAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MHRADLEEGCLSGNVPSVLAAIS*ASFTAA Trigger: AGCAGCTGTGAAGGAGGCCCAGGAAATGGCGGCCAG...GACGGATGGAACATTTCCAGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | CCATCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGGAAGTTGGAAACCAGGAACTGGCCGCCATTTCCTaGGCCTCCTTCACAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSASVGRTSVGLEVGNQELAAIS*ASFTAA Trigger: AGCAGCTGTGAAGGAGGCCCAGGAAATGGCGGCCAG...TTCCTGGTTTCCAACTTCCAGTCCTACAGACGTTCTACCAACAGAGGCAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | TGGACACTGCAGGCCAACCTTGAGCATTATGCACAGAGCAGACCTGGAAGAGGGCCACGGGTCGAGGTGTaGTTAACCTGCTTCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: WTLQANLEHYAQSRPGRGPRVEV*LTCFHS Trigger: ACTATGGAAGCAGGTTAACCACACCTCGACCCGTGG...CCCTCTTCCAGGTCTGCTCTGTGCATAATGCTCAAGGTTGGCCTGCAGTGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGACTTGGCTGCTATGGTaGGAACTGGGTCGTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSWLVPSASVGRTSVGLTWLLW*ELGRGA Trigger: TGCTCCACGACCCAGTTCCCACCATAGCAGCCAAGT...CAGTCCTACAGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGACTTGGCTGCTATGGTaGGAACTGGGTCGTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TRKTLWCGSAFPPTRIVGTWLLW*ELGRGA Trigger: TGCTCCACGACCCAGTTCCCACCATAGCAGCCAAGT...CCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | GGACACTGCAGGCCAACCTTGAGCATTATGCACAGAGCAGACCTGGAAGAGGGAACTACTTGGCTGCTATaGTGGGAACTGGGTCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHCRPTLSIMHRADLEEGTTWLL*WELGRG Trigger: TCCACGACCCAGTTCCCACCATAGCAGCCAAGTAGT...TCCCTCTTCCAGGTCTGCTCTGTGCATAATGCTCAAGGTTGGCCTGCAGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| 3UTR CAA 72 bp | CTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATaGTTGGGAGTGAGGACTCTTGTGTGGCCTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGVVLLSLRPE*LGVRTLVWPES Trigger: GGATTCAGGCCACACAAGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000219350.2 ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| 3UTR CAA 72 bp | AAAAATGGCGCCCAGCATCAAAGGCCAGGAGGAAGCTaGCGAAAGCAGTCAGAGTCTCCTTTCAGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNGAQHQRPGGS*RKQSESPFRVL Trigger: CAGGACCCTGAAAGGAGACTCTGACTGCTTTCGCAAGCTTCCTCCTGGCCTTTGATGCTGGGCGCCATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR CAA 72 bp | CTTGTAAGCACCCTTCACGGTGCTCTGTTCAGTTTCTaGAGTTGGGAGGACAGGGCCTGTCGCTGTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LVSTLHGALFSF*SWEDRACRCLM Trigger: CATCAGACAGCGACAGGCCCTGTCCTCCCAACTCAAGAAACTGAACAGAGCACCGTGAAGGGTGCTTACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| 3UTR CAA 72 bp | AGGGATGGACTCCATAGAAGAAGAGCGACTGACTACTaGGCTGCTATGGTGGGAACTGGGTCGTGGAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RDGLHRRRATDY*AAMVGTGSWSN Trigger: GTTGCTCCACGACCCAGTTCCCACCATAGCAGCCAAGTAGTCAGTCGCTCTTCTTCTATGGAGTCCATCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| CDS-3UTR TCA 90 bp | TGGACACTGCAGGCCAACCTTGAGCATTATGCACAGAGCAGACCTGGAAGAGGGAGAGAGGCTATGAGTTaGAGCTGGAGAAGGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WTLQANLEHYAQSRPGRGREAMS*SWRRGF Trigger: GAAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCT...CCCTCTTCCAGGTCTGCTCTGTGCATAATGCTCAAGGTTGGCCTGCAGTGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218311.2 |
||
| CDS-3UTR GCA 90 bp | ATAGCCCCTGAGAGAACTGGACACTGCAGGCCAACCTTGAGCATTATGCACAGAGTTCCACGTGACCCATaGCAGCCACTGTGTAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IAPERTGHCRPTLSIMHRVPRDP*QPLCKG Trigger: TCCCTTACACAGTGGCTGGCATGGGTCACGTGGAAC...TCTGTGCATAATGCTCAAGGTTGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR GCA 90 bp | AGGACTCTTGTGTGGCCTGAATCCCCACTGAAGAATGGCCTAAAAGAAACCCCCGTTCCACGTGACCCATaGCAGCCACTGTGTAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLVWPESPLKNGLKETPVPRDP*QPLCKG Trigger: TCCCTTACACAGTGGCTGGCATGGGTCACGTGGAAC...GGGGGTTTCTTTTAGGCCATTCTTCAGTGGGGATTCAGGCCACACAAGAGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAATGGCCTAAAAGAAACCCCCTGTCCGGAGGAGGCAGACGAAGGTCTGTATTACGTGCAGACCTCTaGTTCCCTGTTCCACGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EEWPKRNPLSGGGRRRSVLRADL*FPVPRD Trigger: GTCACGTGGAACAGGGAAGCAGAGGTCTGCACGTAA...TACAGACCTTCGTCTGCCTCCTCCGGACAGGGGGTTTCTTTTAGGCCATTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGTTGGAAACCAGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCACCACGGGTCGAGGTGTaGTTAACCTGCTTCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSWKPGRLSGVVLLSLRPPRVEV*LTCFHS Trigger: ACTATGGAAGCAGGTTAACCACACCTCGACCCGTGG...TGGTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGTTTCCAACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAGTGAGGACTACTACTTGGCTGCTATaGTGGGAACTGGGTCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSGVVLLSLRPELLGVRTTTWLL*WELGRG Trigger: TCCACGACCCAGTTCCCACCATAGCAGCCAAGTAGT...AGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGAAGACTCTCTGGTGTaGTTCTGCTTTCCCTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLQTETRNQQVPIAPERTEDSLV*FCFPSD Trigger: GTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTC...AGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218311.2 |
||
| 3UTR CAA 72 bp | AAGCACCCTTCACGGTGCTCTGTTCAGTTTCTTGAGTaGGGAGGACAGGGCCTGTCGCTGTCTGATGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KHPSRCSVQFLE*GGQGLSLSDVY Trigger: ATACACATCAGACAGCGACAGGCCCTGTCCTCCCAACTCAAGAAACTGAACAGAGCACCGTGAAGGGTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219496.2 ENSMUST00000219519.3 ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGTGTGGTTCTGCTTTCCCTCCGACCAGAATTGTTGGGAGTGAGGACTCTTACTACTTGGCTGCTATaGTGGGAACTGGGTCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGVVLLSLRPELLGVRTLTTWLL*WELGRG Trigger: TCCACGACCCAGTTCCCACCATAGCAGCCAAGTAGT...AAGAGTCCTCACTCCCAACAATTCTGGTCGGAGGGAAAGCAGAACCACACCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGACCAGGAAGACTCTCTaGTGTGGTTCTGCTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ENKLQTETRNQQVPIAPETRKTL*CGSAFP Trigger: AGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGT...CTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218311.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTTCCATCCGTCTTTCCTaGCTAGTCCCATCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QENKLQTETRNQQVPIAPSIRLS*LVPSAS Trigger: AGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGA...AGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218311.2 |
||
| CDS-3UTR GCA 90 bp | CCATCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGGAAGTTGGAAACCAGGAATTACGTGCAGACCTCTaGTTCCCTGTTCCACGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSASVGRTSVGLEVGNQELRADL*FPVPRD Trigger: GTCACGTGGAACAGGGAAGCAGAGGTCTGCACGTAA...TTCCTGGTTTCCAACTTCCAGTCCTACAGACGTTCTACCAACAGAGGCAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR GCA 90 bp | TATGCACAGAGCAGACCTGGAAGAGGGATGTCTATCTGGAAATGTTCCATCCGTTTACGTGCAGACCTCTaGTTCCCTGTTCCACGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YAQSRPGRGMSIWKCSIRLRADL*FPVPRD Trigger: GTCACGTGGAACAGGGAAGCAGAGGTCTGCACGTAA...ACGGATGGAACATTTCCAGATAGACATCCCTCTTCCAGGTCTGCTCTGTGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTTGGAAACCAGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCTCCGACCCTGGTGACAAAGAAATaGGCCCCATCTTTTCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WKLETRKTLWCGSAFPPTLVTKK*APSFRK Trigger: TTTCCGAAAAGATGGGGCCCATTTCTTTGTCACCAG...GGTCGGAGGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGTTTCCAACTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000219350.2 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | ACATCAGTGAAAAGAGAGAATCAGAGCTCCAAAAATGGCGCCCAGCATCAAAGGACTTGGCTGCTATGGTaGGAACTGGGTCGTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSVKRENQSSKNGAQHQRTWLLW*ELGRGA Trigger: TGCTCCACGACCCAGTTCCCACCATAGCAGCCAAGT...CCTTTGATGCTGGGCGCCATTTTTGGAGCTCTGATTCTCTCTTTTCACTGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219519.3 |
||
| CDS-3UTR GCA 90 bp | CTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGATCAGAAAGAGCCAGATaGTTGCAAAGATTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LQTETRNQQVPIAPERTGSERAR*LQRFPQ Trigger: TTGTGGAAATCTTTGCAAGCATCTGGCTCTTTCTGA...TCCAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | AGGACTCTTGTGTGGCCTGAATCCCCACTGAAGAATGGCCTAAAAGAAACCCCCCTGGTGACAAAGAAATaGGCCCCATCTTTTCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTLVWPESPLKNGLKETPLVTKK*APSFRK Trigger: TTTCCGAAAAGATGGGGCCCATTTCTTTGTCACCAG...GGGGGTTTCTTTTAGGCCATTCTTCAGTGGGGATTCAGGCCACACAAGAGTCCT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 4 transcripts: ENSMUST00000219350.2 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGACTGGAAGTTGGAAACCAGGAAGACTCTCTGGTGTGGTTCTGCTTTCCCCTGGTGACAAAGAAATaGGCCCCATCTTTTCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGLEVGNQEDSLVWFCFPLVTKK*APSFRK Trigger: TTTCCGAAAAGATGGGGCCCATTTCTTTGTCACCAG...GGGAAAGCAGAACCACACCAGAGAGTCTTCCTGGTTTCCAACTTCCAGTCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000219350.2 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | ATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCACCACGGGTCGAGGTGTaGTTAACCTGCTTCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: ITFKKTSCRLKPGTSKCPPRVEV*LTCFHS Trigger: ACTATGGAAGCAGGTTAACCACACCTCGACCCGTGG...TGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTGGAGAGAAAGACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGCTTCCCTGTTCCACGTaGCCCATGCCAGCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLERKTCKITFKKTSCRLLPCST*PMPATV Trigger: CACAGTGGCTGGCATGGGTCACGTGGAACAGGGAAG...CAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACATGTCTTTCTCTCCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGGAAGTTGGAAACCAGGAAGACCTGGTGACAAAGAAATaGGCCCCATCTTTTCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SASVGRTSVGLEVGNQEDLVTKK*APSFRK Trigger: TTTCCGAAAAGATGGGGCCCATTTCTTTGTCACCAG...GTCTTCCTGGTTTCCAACTTCCAGTCCTACAGACGTTCTACCAACAGAGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000219350.2 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | GAATCAGAGCTCCAAAAATGGCGCCCAGCATCAAAGGCCAGGAGGAAGCTTGCGTTTTTACAGAAAATATaGCCACAGCTGGTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESELQKWRPASKARRKLAFLQKI*PQLVTK Trigger: CTTTGTCACCAGCTGTGGCCATATTTTCTGTAAAAA...CGCAAGCTTCCTCCTGGCCTTTGATGCTGGGCGCCATTTTTGGAGCTCTGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTGGAGAGAAAGACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGCTGGCCGCCATTTCCTaGGCCTCCTTCACAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLERKTCKITFKKTSCRLLAAIS*ASFTAA Trigger: AGCAGCTGTGAAGGAGGCCCAGGAAATGGCGGCCAG...CAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACATGTCTTTCTCTCCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTTTTTTACAGAAAATATaGCCACAGCTGGTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLQTETRNQQVPIAPERTFLQKI*PQLVTK Trigger: CTTTGTCACCAGCTGTGGCCATATTTTCTGTAAAAA...AGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGTTTTTACAGAAAATATaGCCACAGCTGGTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSWLVPSASVGRTSVGLFLQKI*PQLVTK Trigger: CTTTGTCACCAGCTGTGGCCATATTTTCTGTAAAAA...CAGTCCTACAGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000219350.2 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGACTACTTGGCTGCTATaGTGGGAACTGGGTCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CKITFKKTSCRLKPGTSKTTWLL*WELGRG Trigger: TCCACGACCCAGTTCCCACCATAGCAGCCAAGTAGT...CTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTGTAGGACTGGAAGTTGGAAACTCAGAAAGAGCCAGATaGTTGCAAAGATTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LVPSASVGRTSVGLEVGNSERAR*LQRFPQ Trigger: TTGTGGAAATCTTTGCAAGCATCTGGCTCTTTCTGA...GTTTCCAACTTCCAGTCCTACAGACGTTCTACCAACAGAGGCAGATGGGACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAAGAAGAGCGACTGACTACTTGGCTGCTATGGTGGGAACTGGGTCGTGGATTTTTACAGAAAATATaGCCACAGCTGGTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IEEERLTTWLLWWELGRGFLQKI*PQLVTK Trigger: CTTTGTCACCAGCTGTGGCCATATTTTCTGTAAAAA...TCCACGACCCAGTTCCCACCATAGCAGCCAAGTAGTCAGTCGCTCTTCTTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTGGAGAGAAAGACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGCAGAATTGTTGGGAGTaGGGACTCTTGTGTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLERKTCKITFKKTSCRLQNCWE*GLLCGL Trigger: CAGGCCACACAAGAGTCCTCACTCCCAACAATTCTG...CAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACATGTCTTTCTCTCCAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218311.2 |
||
| 3UTR CAA 72 bp | GTCGAGGTGTGGTTAACCTGCTTCCATAGTAGCAGCTaGGAGATCCCTTTAGGATGTCTAGAATTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VEVWLTCFHSSS*EIPLGCLEFSS Trigger: TGAAGAAAATTCTAGACATCCTAAAGGGATCTCCAAGCTGCTACTATGGAAGCAGGTTAACCACACCTCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220122.2 |
||
| CDS-3UTR GCA 90 bp | ACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCTCAGAAAGAGCCAGATaGTTGCAAAGATTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TCKITFKKTSCRLKPGTSSERAR*LQRFPQ Trigger: TTGTGGAAATCTTTGCAAGCATCTGGCTCTTTCTGA...GCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCAGGACTGGTGACAAAGAAATaGGCCCCATCTTTTCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKTCKITFKKTSCRLKPGLVTKK*APSFRK Trigger: TTTCCGAAAAGATGGGGCCCATTTCTTTGTCACCAG...TCCTGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACATGTCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTTTTTACAGAAAATATaGCCACAGCTGGTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CKITFKKTSCRLKPGTSKFLQKI*PQLVTK Trigger: CTTTGTCACCAGCTGTGGCCATATTTTCTGTAAAAA...CTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000220122.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS GCA 90 bp | AGGCAGTGTAAGAGTCTCCAGGAGTGCTCCTTACGTGCAGACCTCTaGTTCCCTGTTCCACGTGACCCATGCCAGCCACTGTGTAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RQCKSLQECSLRADL*FPVPRDPCQPLCKG Trigger: TCCCTTACACAGTGGCTGGCATGGGTCACGTGGAACAGGGAAGCAGAGGTCTGCACGTAAGGAGCACTCCTGGAGACTCTTACACTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000219519.3 ENSMUST00000220208.2 |
||
| CDS-3UTR CAA 90 bp | AGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCAACCCTCCGACCAGAATTGTaGGGAGTGAGGACTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RNQQVPIAPERTGHCRPTLRPEL*GVRTLV Trigger: CACAAGAGTCCTCACTCCCAACAATTCTGGTCGGAG...GGTTGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218311.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGACACTGCAGGCCAGAAAGAGCCAGATGCTaGCAAAGATTTCCACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: TRNQQVPIAPERTGHCRPERARC*QRFPQT Trigger: TGTTTGTGGAAATCTTTGCAAGCATCTGGCTCTTTC...TGGCCTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CAA 90 bp | AACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAAAGAGAGGCTATGAGTaGAAGCTGGAGAAGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NKLQTETRNQQVPIAPERKRGYE*KLEKGF Trigger: AAACCCCTTCTCCAGCTTCAACTCATAGCCTCTCTT...TCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218311.2 |
||
| CDS-3UTR CAA 90 bp | CTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGAGAAAGAGCCAGATGCTaGCAAAGATTTCCACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LQTETRNQQVPIAPERTGERARC*QRFPQT Trigger: TGTTTGTGGAAATCTTTGCAAGCATCTGGCTCTTTC...TCCAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTGGTTTCAGTCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS-3UTR CAA 90 bp | GTAAGCACCCTTCACGGTGCTCTGTTCAGTTTCTTGAGTTGGGAGGACAGGGCCGAAAGAGCCAGATGCTaGCAAAGATTTCCACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: VSTLHGALFSFLSWEDRAERARC*QRFPQT Trigger: TGTTTGTGGAAATCTTTGCAAGCATCTGGCTCTTTC...GGCCCTGTCCTCCCAACTCAAGAAACTGAACAGAGCACCGTGAAGGGTGCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220403.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAATGGCCTAAAAGAAACCCCCTGTCCGGAGGAGGCAGACGAAGGTCTGTAGAAAGAGCCAGATGCTaGCAAAGATTTCCACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: EEWPKRNPLSGGGRRRSVERARC*QRFPQT Trigger: TGTTTGTGGAAATCTTTGCAAGCATCTGGCTCTTTC...TACAGACCTTCGTCTGCCTCCTCCGGACAGGGGGTTTCTTTTAGGCCATTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000219350.2 ENSMUST00000220208.2 ENSMUST00000220403.2 |
||
| CDS GCA 90 bp | ACTTCTTTTCTTGAGGCTTTAGATTATCAGAAAGAGCCAGATGCTTaGAAAGATTTCCACAAACAGCACATTTTTCCAAAGTCATACACT | + |
|
Preference number: 5 (lower is better) Translates to: TSFLEALDYQKEPDA*KDFHKQHIFPKSYT Trigger: AGTGTATGACTTTGGAAAAATGTGCTGTTTGTGGAAATCTTTGCAAGCATCTGGCTCTTTCTGATAATCTAAAGCCTCAAGAAAAGAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000218311.2 ENSMUST00000219350.2 ENSMUST00000220208.2 |
||
| CDS GCA 72 bp | AAACATCTGGTGGCAGTATTATCAGAAAGAGCCAGATaGTTGCAAAGATTTCCACAAACAGCACATTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: KHLVAVLSERAR*LQRFPQTAHFS Trigger: GGAAAAATGTGCTGTTTGTGGAAATCTTTGCAAGCATCTGGCTCTTTCTGATAATACTGCCACCAGATGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220403.2 |
||