Pregenerated sensors for RNF19B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028793Ensembl transcript IDs: ENSMUST00000030584.11, ENSMUST00000097874.9, ENSMUST00000130803.3, ENSMUST00000152565.8, ENSMUST00000168461.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGCATTTCCTGTTCCAATATGCAAGGAAATGCAAGGTGGCCTGTaGAGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: TAFPVPICKEMQGGL*SLRSKIFHSGCCLD Trigger: GTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCTCCACAGGCCACCTTGCATTTCCTTGCATATTGGAACAGGAAATGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| 3UTR GCA 90 bp | CTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATATaGAAGGAAATGCAAGGTGGCCTGTGGAGCCTGAGAAGTAAGATC | + |
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Preference number: 1 (lower is better) Translates to: LTETPSPLTAFPVPI*KEMQGGLWSLRSKI Trigger: GATCTTACTTCTCAGGCTCCACAGGCCACCTTGCATTTCCTTGCATATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| 3UTR-3UTR CCA 90 bp | CGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATTAACAACAGTGGCTGCTGTCTaGACGCCCCATCCTTTACTG | + |
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Preference number: 2 (lower is better) Translates to: RTGTSLGHFLTETPSPLTTVAAV*TPHPLL Trigger: CAGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGT...TGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| 3UTR-3UTR CCA 90 bp | TTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCACAAGGAAATGCAAGGTaGCCTGTGGAGCCTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: FSRTGTSLGHFLTETPSPQGNAR*PVEPEK Trigger: CTTCTCAGGCTCCACAGGCCACCTTGCATTTCCTTG...TGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTATGCAAGGTGGCCTGTaGAGCCTGAGAAGTAAGATC | + |
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Preference number: 2 (lower is better) Translates to: SFSRTGTSLGHFLTETPSMQGGL*SLRSKI Trigger: GATCTTACTTCTCAGGCTCCACAGGCCACCTTGCAT...ACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| 3UTR TCA 72 bp | CAATATGCAAGGAAATGCAAGGTGGCCTGTGGAGCCTaGGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: QYARKCKVACGA*EVRSSTVAAVW Trigger: CCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCTCCACAGGCCACCTTGCATTTCCTTGCATATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| 3UTR GCA 72 bp | ACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATATaGAAGGAAATGCAAGGTGGCCTGTGGAGCCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: TPSPLTAFPVPI*KEMQGGLWSLR Trigger: TCTCAGGCTCCACAGGCCACCTTGCATTTCCTTGCATATTGGAACAGGAAATGCTGTTAATGGACTTGGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | AGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTAGACGCTGTGGAAGGTaGGGCGCCGGCGCCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SLRSKIFHSGCCLDAPSFRRCGR*GAGAGR Trigger: GCGGCCGGCGCCGGCGCCTCACCTTCCACAGCGTCT...AAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | CTGTGGAGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATGCACTCGGGGCAGCTaGTGGGCACGCGGCTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LWSLRSKIFHSGCCLDAPCTRGS*WARGSR Trigger: GCGAGAGCCGCGTGCCCATCAGCTGCCCCGAGTGCA...TGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCTCCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | TTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATCCACCGGCGGGGCCTaGGCCTCAACCGGGGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: FSRTGTSLGHFLTETPSPSTGGA*ASTGAG Trigger: TCCGGCCCCGGTTGAGGCTCAGGCCCCGCCGGTGGA...TGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | TCCTTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTAGCGATGCGGGCAGCTaGGGAGGCGCGGGGCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SFSRTGTSLGHFLTETPSSDAGS*GGAGPA Trigger: AGCGGGCCCCGCGCCTCCTCAGCTGCCCGCATCGCT...ACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | AGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTGCACGCGGCTCTCGCTaGTCTCCAGGCGCAGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SLRSKIFHSGCCLDAPSFARGSR*SPGAGS Trigger: ACTACCTGCGCCTGGAGATCAGCGAGAGCCGCGTGC...AAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | CTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGGTGCACCGTGGACTTaGGGGGTGGAGGGGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LRSKIFHSGCCLDAPSFTGAPWT*GVEGQA Trigger: AGCCTGCCCCTCCACCCCCCAAGTCCACGGTGCACC...AGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | CTGTGGAGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCAAACTCTTCGTACTTGTaGATGAGCGGCGGGTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: LWSLRSKIFHSGCCLDAPNSSYL*MSGGSA Trigger: GGCCGACCCGCCGCTCATGCACAAGTACGAAGAGTT...TGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCTCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | GTTCCAATATGCAAGGAAATGCAAGGTGGCCTGTGGAGCCTGAGAAGTAAGATCGGTGGAGGGGCAGGCTaGAGCATGGGAGCGGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: VPICKEMQGGLWSLRSKIGGGAG*SMGAGR Trigger: TCGCCCCGCTCCCATGCTGCAGCCTGCCCCTCCACC...GATCTTACTTCTCAGGCTCCACAGGCCACCTTGCATTTCCTTGCATATTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | CTGTGGAGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCAGACTTCAAGACAGTCTaGCCCTCAGCTGGAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LWSLRSKIFHSGCCLDAPDFKTV*PSAGAA Trigger: CGCTGCTCCAGCTGAGGGCCAGACTGTCTTGAAGTC...TGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCTCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | CTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGGGGATCGTCTTCACTaGCACCGCTGCCACCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LRSKIFHSGCCLDAPSFTGDRLH*HRCHHQ Trigger: CTGGTGGTGGCAGCGGTGGCAGTGAAGACGATCCCC...AGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | AGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTCAGACGGATGTCGTGTaGGTTGAGCCGCTCGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SLRSKIFHSGCCLDAPSFQTDVV*VEPLAA Trigger: TGCAGCGAGCGGCTCAACCCACACGACATCCGTCTG...AAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | CCCATCCTTTACTGCATAAGGCAGCAGGTAAACAACAAGTGTGCTTCTCAGAACGGGCAGGCTGCAGCATaGGAGCGGGGCGAGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: PILYCIRQQVNNKCASQNGQAAA*ERGEPH Trigger: GTGTGGCTCGCCCCGCTCCCATGCTGCAGCCTGCCC...GTTCTGAGAAGCACACTTGTTGTTTACCTGCTGCCTTATGCAGTAAAGGATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | CCCATCCTTTACTGCATAAGGCAGCAGGTAAACAACAAGTGTGCTTCTCAGAACCCGCATGGAGCGAGGTaGAGCGCGGCGACTCGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PILYCIRQQVNNKCASQNPHGAR*SAATRS Trigger: ACTCCGAGTCGCCGCGCTCCACCTCGCTCCATGCGG...GTTCTGAGAAGCACACTTGTTGTTTACCTGCTGCCTTATGCAGTAAAGGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | CTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGTTCTTGTGGGCACTTaGGCTCGGTGCACCGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LRSKIFHSGCCLDAPSFTVLVGT*ARCTVD Trigger: GTCCACGGTGCACCGAGCCCAAGTGCCCACAAGAAC...AGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | AGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGCATAAGGCACCCGTAACTGAGACCTaGAGTGTGCTTGGTCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: RSSTVAAVWTPHPLLHKAPVTET*SVLGPN Trigger: GTTCGGACCAAGCACACTTCAGGTCTCAGTTACGGG...TGCCTTATGCAGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | TTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCAGCAGCGAGGTTCTTGTaGGCACTTGGGCTCGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: FSRTGTSLGHFLTETPSPAARFL*ALGLGA Trigger: TGCACCGAGCCCAAGTGCCCACAAGAACCTCGCTGC...TGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | GGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTGGATGTCGTGTGGGTTaGGCCGCTCGCTGCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: GTSLGHFLTETPSPLTAFGCRVG*AARCTR Trigger: CCGAGTGCAGCGAGCGGCTCAACCCACACGACATCC...AAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | CCCATCCTTTACTGCATAAGGCAGCAGGTAAACAACAAGTGTGCTTCTCAGAACCTTCGTACTTGTGCATaGGCGGCGGGTCGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PILYCIRQQVNNKCASQNLRTCA*AAGRPA Trigger: TGCTGGCCGACCCGCCGCTCATGCACAAGTACGAAG...GTTCTGAGAAGCACACTTGTTGTTTACCTGCTGCCTTATGCAGTAAAGGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | CTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGGTACCGGCGCAGCATaGACTCTTCGTACTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LRSKIFHSGCCLDAPSFTGTGAA*TLRTCA Trigger: TGCACAAGTACGAAGAGTTCATGCTGCGCCGGTACC...AGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | CGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATTAACAAATGCCAGCAATGAGTaGGATCCCCACCGGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: RTGTSLGHFLTETPSPLTNASNE*DPHRST Trigger: GGTGCTCCGGTGGGGATCTCACTCATTGCTGGCATT...TGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | AGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGCATAAGGCATGCGCTGTCGCTAATTaGACCAAGACTGGCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: RSSTVAAVWTPHPLLHKACAVAN*TKTGCV Trigger: GACACAGCCAGTCTTGGTGCAATTAGCGACAGCGCA...TGCCTTATGCAGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | AGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGCATAAGGCACATAGCACGAGTGCTTaGGCTGTCGCTAATTGCACC | + |
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Preference number: 4 (lower is better) Translates to: RSSTVAAVWTPHPLLHKAHSTSA*AVANCT Trigger: GGTGCAATTAGCGACAGCGCAAGCACTCGTGCTATG...TGCCTTATGCAGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | AGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGCATAAGGCAATTCTTGCCCGTAACTaGGACCTGAAGTGTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RSSTVAAVWTPHPLLHKAILARN*DLKCAW Trigger: CCAAGCACACTTCAGGTCTCAGTTACGGGCAAGAAT...TGCCTTATGCAGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | CCTTTACTGCATAAGGCAGCAGGTAAACAACAAGTGTGCTTCTCAGAACAGGGGTCCTTCTCTGCCACCTaGGCATGGACATGGAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: PLLHKAAGKQQVCFSEQGSFSAT*AWTWSE Trigger: CTCGCTCCATGTCCATGCTCAGGTGGCAGAGAAGGA...CCCCTGTTCTGAGAAGCACACTTGTTGTTTACCTGCTGCCTTATGCAGTAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | CTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTCACACTCATCTGAGGTaGTGTCTGGCACGTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: LRSKIFHSGCCLDAPSFTHTHLR*CLARHL Trigger: CAGATGACGTGCCAGACATCACCTCAGATGAGTGTG...AGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | AGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTCAGGTCTGGTTTGGATaGCATATCTGCTTGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SLRSKIFHSGCCLDAPSFQVWFG*HICLQW Trigger: CCACTGCAAGCAGATATGGCATCCAAACCAGACCTG...AAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | CTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTACTGCATCGTGGGCATaGCTTGATGTCATCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LRSKIFHSGCCLDAPSFTTASWA*LDVICW Trigger: CCAGCAGATGACATCAAGCCATGCCCACGATGCAGT...AGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | AGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGCATAAGGCAGTAAGCACTGCATCGTaGGCATGGCTTGATGTCATC | + |
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Preference number: 4 (lower is better) Translates to: RSSTVAAVWTPHPLLHKAVSTAS*AWLDVI Trigger: GATGACATCAAGCCATGCCCACGATGCAGTGCTTAC...TGCCTTATGCAGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | TTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATGGGGATGCAATGACTaGCAAGGTCACTCCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: FSRTGTSLGHFLTETPSPWGCND*QGHSSC Trigger: ACAGGAGGAGTGACCTTGTCAGTCATTGCATCCCCA...TGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | AGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTAGGCATCTGCCACTGTaGTTGGACCATCATCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SLRSKIFHSGCCLDAPSFRHLPL*LDHHLH Trigger: ATGAAGATGATGGTCCAATCACAGTGGCAGATGCCT...AAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | AGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGCATAAGGCAATCGCAGGTCTGGTTTaGATGCCATATCTGCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: RSSTVAAVWTPHPLLHKAIAGLV*MPYLLA Trigger: TGCAAGCAGATATGGCATCCAAACCAGACCTGCGAT...TGCCTTATGCAGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | CCCATCCTTTACTGCATAAGGCAGCAGGTAAACAACAAGTGTGCTTCTCAGAACATCGTGGGCATGGCTTaGTGTCATCTGCTGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PILYCIRQQVNNKCASQNIVGMA*CHLLVQ Trigger: CTGGACCAGCAGATGACATCAAGCCATGCCCACGAT...GTTCTGAGAAGCACACTTGTTGTTTACCTGCTGCCTTATGCAGTAAAGGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | CTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGATGCCATATCTGCTTaGAGTGGTAGCAGAACTCAG | + |
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Preference number: 4 (lower is better) Translates to: LRSKIFHSGCCLDAPSFTDAISA*SGSRTQ Trigger: CTGAGTTCTGCTACCACTGCAAGCAGATATGGCATC...AGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | TCCTTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTTCCTTCCCTCGTACCTaGTGTGAATCTTTCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SFSRTGTSLGHFLTETPSSFPRT*CESFSP Trigger: TGGGGAGAAAGATTCACAGCAGGTACGAGGGAAGGA...ACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | AGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTAACCCCATAAACATATaGCAGCATAATGGGGACACC | + |
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Preference number: 4 (lower is better) Translates to: SLRSKIFHSGCCLDAPSFNPINI*QHNGDT Trigger: GGTGTCCCCATTATGCTGGCATATGTTTATGGGGTT...AAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | GGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTGGCTCGCCAGGCATCTaGCACTGTGATTGGACCATC | + |
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Preference number: 4 (lower is better) Translates to: GTSLGHFLTETPSPLTAFGSPGI*HCDWTI Trigger: GATGGTCCAATCACAGTGGCAGATGCCTGGCGAGCC...AAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | CACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATATGCTACCACCACTCAGTGTaGCCCCTGAGAGGGCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: HFLTETPSPLTAFPVPICYHHSV*PLRGQR Trigger: TCGCTGCCCTCTCAGGGGGCACACTGAGTGGTGGTA...GCATATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | TTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCACTCTTCTTCCTTCTCTaGCACCTGAGCATGGACATG | + |
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Preference number: 4 (lower is better) Translates to: FSRTGTSLGHFLTETPSPLFFLL*HLSMDM Trigger: CATGTCCATGCTCAGGTGGCAGAGAAGGAAGAAGAG...TGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | GGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATAAGCTCTCCAGGTCACTaGGGATGCTCTCAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHFLTETPSPLTAFPVPISSPGH*GCSQAG Trigger: CCCAGCCTGAGAGCATCCGCAGTGACCTGGAGAGCT...TATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR CCA 90 bp | CTGTGGAGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCAGCTTCAATGTCCACTTaGATTTCCATATTGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LWSLRSKIFHSGCCLDAPASMST*ISILLH Trigger: GTGCAACAATATGGAAATCCAAGTGGACATTGAAGC...TGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCTCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR TCA 90 bp | GGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTTTGCAATGCCAGCAATaGGTGAGATCCCCACCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTSLGHFLTETPSPLTAFLQCQQ*VRSPPE Trigger: CTCCGGTGGGGATCTCACTCATTGCTGGCATTGCAA...AAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR TCA 90 bp | CCTTTACTGCATAAGGCAGCAGGTAAACAACAAGTGTGCTTCTCAGAACAGGGGTTACTGGGGATGCAATaGCTGACAAGGTCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLHKAAGKQQVCFSEQGLLGMQ*LTRSLL Trigger: GAGGAGTGACCTTGTCAGTCATTGCATCCCCAGTAA...CCCCTGTTCTGAGAAGCACACTTGTTGTTTACCTGCTGCCTTATGCAGTAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | TCCTTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCTGAGACCTGAAGTGTaGTTGGTCCGAACTCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFSRTGTSLGHFLTETPSLRPEV*LVRTRK Trigger: TTTACGAGTTCGGACCAAGCACACTTCAGGTCTCAG...ACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR GCA 90 bp | GTTCCAATATGCAAGGAAATGCAAGGTGGCCTGTGGAGCCTGAGAAGTAAGATCTCGCTGTATGGTCCCTaGATGACACTGAGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VPICKEMQGGLWSLRSKISLYGP*MTLSPS Trigger: AGATGGACTCAGTGTCATGCAGGGACCATACAGCGA...GATCTTACTTCTCAGGCTCCACAGGCCACCTTGCATTTCCTTGCATATTGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR GCA 90 bp | GGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATAGGAGCGAGTCCTCTGTaGTGCTGCCACTCACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: GHFLTETPSPLTAFPVPIGASPL*CCHSPT Trigger: AGTTGGTGAGTGGCAGCAGCACAGAGGACTCGCTCC...TATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR CCA 90 bp | CCTTTACTGCATAAGGCAGCAGGTAAACAACAAGTGTGCTTCTCAGAACAGGGGACTTTCCCTTGCCGCTaGAGAGAATACCACCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLHKAAGKQQVCFSEQGTFPCR*REYHHS Trigger: TGAGTGGTGGTATTCTCTCCAGCGGCAAGGGAAAGT...CCCCTGTTCTGAGAAGCACACTTGTTGTTTACCTGCTGCCTTATGCAGTAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR TCA 90 bp | TTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATTTTGGACATCAGCTTaGACTTCTAACCGGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSRTGTSLGHFLTETPSPFWTSA*TSNRLY Trigger: GTACAGCCGGTTAGAAGTTCAAGCTGATGTCCAAAA...TGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR GCA 90 bp | CACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATATGCGGCTCCATGGCTTCTTaGCCCAGAATGTACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HFLTETPSPLTAFPVPICGSMAS*PRMYSQ Trigger: CTGGCTGTACATTCTGGGGCAAGAAGCCATGGAGCC...GCATATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR GCA 90 bp | CCTTTACTGCATAAGGCAGCAGGTAAACAACAAGTGTGCTTCTCAGAACAGGGGGCCAAATTCCTCTTGTaGTTGGAGGTTTTCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLHKAAGKQQVCFSEQGAKFLL*LEVFLP Trigger: GGGAAGGAAAACCTCCAAGCACAAGAGGAATTTGGC...CCCCTGTTCTGAGAAGCACACTTGTTGTTTACCTGCTGCCTTATGCAGTAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | TCCTTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTAATTCCTCTTGTGCTTaGAGGTTTTCCTTCCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SFSRTGTSLGHFLTETPSNSSCA*RFSFPR Trigger: ACGAGGGAAGGAAAACCTCCAAGCACAAGAGGAATT...ACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR CCA 90 bp | TCCTTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTGCACTCTCTGTCCTGTaGGTTGTAGGAACTGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: SFSRTGTSLGHFLTETPSALSVL*VVGTDY Trigger: ATAATCAGTTCCTACAACCCACAGGACAGAGAGTGC...ACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR CCA 90 bp | CGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGACTGGCTGTGTCTTTaGGGAAAATTTCCTTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTGTSLGHFLTETPSPLTDWLCL*GKFPFG Trigger: TCCAAAAGGAAATTTTCCCCAAAGACACAGCCAGTC...TGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | TTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCAGATAGTGACTTGGTTTaGCTTCAATGTCCACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSRTGTSLGHFLTETPSPDSDLV*LQCPLG Trigger: TCCAAGTGGACATTGAAGCCAAACCAAGTCACTATC...TGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | CACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATATGCGCCATATCGCAGGTCTaGTTTGGATGCCATATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HFLTETPSPLTAFPVPICAISQV*FGCHIC Trigger: GCAGATATGGCATCCAAACCAGACCTGCGATATGGC...GCATATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | CACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATATGCCTTTTTGCGGCTCCATaGCTTCTTGCCCCAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HFLTETPSPLTAFPVPICLFAAP*LLAPEC Trigger: ACATTCTGGGGCAAGAAGCCATGGAGCCGCAAAAAG...GCATATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | TTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCAATCTGCCACTGTGATTaGACCATCATCTTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSRTGTSLGHFLTETPSPICHCD*TIIFIK Trigger: TTTGATGAAGATGATGGTCCAATCACAGTGGCAGAT...TGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR TCA 90 bp | CACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATATGCCACTTCATACTCTTCTaGCTTCAAGACAGTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HFLTETPSPLTAFPVPICHFILF*LQDSLA Trigger: GGCCAGACTGTCTTGAAGTCAGAAGAGTATGAAGTG...GCATATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | CACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATATGCGACCTGAAGTGTGCTTaGTCCGAACTCGTAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HFLTETPSPLTAFPVPICDLKCA*SELVKS Trigger: AGACTTTACGAGTTCGGACCAAGCACACTTCAGGTC...GCATATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR GCA 90 bp | GGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATAGAGCACCGATCAATGTaGCCAACTGCCAAAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GHFLTETPSPLTAFPVPIEHRSM*PTAKEF Trigger: AAATTCTTTGGCAGTTGGGCACATTGATCGGTGCTC...TATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR GCA 90 bp | GGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATAGGATTTCCATATTGTTaGACTCTCTGTCCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHFLTETPSPLTAFPVPIGFPYC*TLCPVG Trigger: ACCCACAGGACAGAGAGTGCAACAATATGGAAATCC...TATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR GCA 90 bp | GTTCCAATATGCAAGGAAATGCAAGGTGGCCTGTGGAGCCTGAGAAGTAAGATCATCAATGTGCCCAACTaGCAAAGAATTTTCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPICKEMQGGLWSLRSKIINVPN*QRIFFL Trigger: CAAAAAGAAAATTCTTTGGCAGTTGGGCACATTGAT...GATCTTACTTCTCAGGCTCCACAGGCCACCTTGCATTTCCTTGCATATTGGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CCA 90 bp | CACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATATGCCAACTGATAGTGACTTaGTTTGGCTTCAATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HFLTETPSPLTAFPVPICQLIVT*FGFNVH Trigger: GTGGACATTGAAGCCAAACCAAGTCACTATCAGTTG...GCATATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS CCA 90 bp | CGGCGCCGGCCGCCGCTGCGGCACTTAGGGTCGGGGGCGGCCGCATaGAGCGAGGTGGAGCGCGGCGACTCGGAGTCCTTCTCGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRRPPLRHLGSGAAA*SEVERGDSESFSEP Trigger: GGGCTCCGAGAAGGACTCCGAGTCGCCGCGCTCCACCTCGCTCCATGCGGCCGCCCCCGACCCTAAGTGCCGCAGCGGCGGCCGGCGCCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000168461.8 |
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| CDS TCA 90 bp | GCAGGTAGTGGCGGAGGCAGTCCCGGCACGAGCGATGCGGGCAGCTaGGGAGGCGCGGGGCCCGCTCGGGCGGCAGGCGCACCAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: AGSGGGSPGTSDAGS*GGAGPARAAGAPGT Trigger: TGTGCCTGGTGCGCCTGCCGCCCGAGCGGGCCCCGCGCCTCCTCAGCTGCCCGCATCGCTCGTGCCGGGACTGCCTCCGCCACTACCTGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000168461.8 |
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| CDS CCA 90 bp | CTTGTGCATGAGCGGCGGGTCGGCCAGCAGCAGACGGATGTCGTGTaGGTTGAGCCGCTCGCTGCACTCGGGGCAGCTGATGGGCACGCG | + |
|
Preference number: 5 (lower is better) Translates to: LVHERRVGQQQTDVV*VEPLAALGAADGHA Trigger: CGCGTGCCCATCAGCTGCCCCGAGTGCAGCGAGCGGCTCAACCCACACGACATCCGTCTGCTGCTGGCCGACCCGCCGCTCATGCACAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000168461.8 |
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| CDS GCA 90 bp | GGGTCCGAGGCCAGGTACCGGCGCAGCATGAACTCTTCGTACTTGTaGATGAGCGGCGGGTCGGCCAGCAGCAGACGGATGTCGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSEARYRRSMNSSYL*MSGGSASSRRMSCG Trigger: CCCACACGACATCCGTCTGCTGCTGGCCGACCCGCCGCTCATGCACAAGTACGAAGAGTTCATGCTGCGCCGGTACCTGGCCTCGGACCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000168461.8 |
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| CDS TCA 90 bp | GGCAGGCTGCAGCATGGGAGCGGGGCGAGCCACACTCATCTGAGGTaGTGTCTGGCACGTCATCTGACTGCGTGTCAGAGCTCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRLQHGSGASHTHLR*CLARHLTACQSSPG Trigger: ACCTGGAGAGCTCTGACACGCAGTCAGATGACGTGCCAGACATCACCTCAGATGAGTGTGGCTCGCCCCGCTCCCATGCTGCAGCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000168461.8 |
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| CDS TCA 90 bp | CTTTCCCTTGCCGCTGGAGAGAATACCACCACTCAGTGTGCCCCCTaGGAGGGCAGCGAAGCTGGCTGTCTCGCTGTATGGTCCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSLAAGENTTTQCAP*EGSEAGCLAVWSLH Trigger: ATGCAGGGACCATACAGCGAGACAGCCAGCTTCGCTGCCCTCTCAGGGGGCACACTGAGTGGTGGTATTCTCTCCAGCGGCAAGGGAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000130803.3 ENSMUST00000152565.8 ENSMUST00000168461.8 |
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| CDS-3UTR CAA 90 bp | AGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTGCATAAGGCACCGATGCTGGGGTTCTaGAGGGCTCGCCAGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RSSTVAAVWTPHPLLHKAPMLGF*RARQAS Trigger: AGATGCCTGGCGAGCCCTCAAGAACCCCAGCATCGG...TGCCTTATGCAGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS CCA 90 bp | GGACATCAGCTTGAACTTCTAACCGGCTGTACTTTCCCTTGCCGCTaGAGAGAATACCACCACTCAGTGTGCCCCCTGAGAGGGCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: GHQLELLTGCTFPCR*REYHHSVCPLRGQR Trigger: TCGCTGCCCTCTCAGGGGGCACACTGAGTGGTGGTATTCTCTCCAGCGGCAAGGGAAAGTACAGCCGGTTAGAAGTTCAAGCTGATGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000130803.3 ENSMUST00000168461.8 |
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| CDS-3UTR CAA 90 bp | CTGTGGAGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCACGGCTGTACTTTCCCTaGCCGCTGGAGAGAATACCA | + |
|
Preference number: 5 (lower is better) Translates to: LWSLRSKIFHSGCCLDAPRLYFP*PLERIP Trigger: TGGTATTCTCTCCAGCGGCAAGGGAAAGTACAGCCG...TGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCTCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CAA 90 bp | TTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCAGGAGCAGCGAGGTTCTaGTGGGCACTTGGGCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: FSRTGTSLGHFLTETPSPGAARF*WALGLG Trigger: ACCGAGCCCAAGTGCCCACAAGAACCTCGCTGCTCC...TGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CAA 90 bp | GGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCGGATGTCGTGTGGGTaGAGCCGCTCGCTGCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: GTSLGHFLTETPSPLTAFRMSCG*SRSLHS Trigger: CGAGTGCAGCGAGCGGCTCAACCCACACGACATCCG...AAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CAA 90 bp | AGCCTGAGAAGTAAGATCTTCCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTTCTCACAGGTTAGCTTaGGGCAACTGGCACAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLRSKIFHSGCCLDAPSFSHRLA*GNWHSH Trigger: ATGGCTGTGCCAGTTGCCCAAAGCTAACCTGTGAGA...AAAGGATGGGGCGTCCAGACAGCAGCCACTGTGGAAGATCTTACTTCTCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CAA 90 bp | TCCTTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCGGCTCCATGGCTTCTaGCCCCAGAATGTACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFSRTGTSLGHFLTETPSRLHGF*PQNVQP Trigger: TGGCTGTACATTCTGGGGCAAGAAGCCATGGAGCCG...ACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS GCA 90 bp | TGGGTTGTAGGAACTGATTATGGAACCGGCCATAGCACGAGTGCTTaGGCTGTCGCTAATTGCACCAAGACTGGCTGTGTCTTTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WVVGTDYGTGHSTSA*AVANCTKTGCVFGE Trigger: TTCCCCAAAGACACAGCCAGTCTTGGTGCAATTAGCGACAGCGCAAGCACTCGTGCTATGGCCGGTTCCATAATCAGTTCCTACAACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000130803.3 ENSMUST00000168461.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTATGAACTCTTCGTACTaGTGCATGAGCGGCGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SFSRTGTSLGHFLTETPSMNSSY*CMSGGS Trigger: CGACCCGCCGCTCATGCACAAGTACGAAGAGTTCAT...ACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR CAA 90 bp | TCCTTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCATCGTGGGCATGGCTaGATGTCATCTGCTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFSRTGTSLGHFLTETPSHRGHG*MSSAGP Trigger: TGGACCAGCAGATGACATCAAGCCATGCCCACGATG...ACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR CAA 90 bp | GGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATAGGTTCTTGTGGGCACTaGGGCTCGGTGCACCGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GHFLTETPSPLTAFPVPIGSCGH*GSVHRG Trigger: TCCACGGTGCACCGAGCCCAAGTGCCCACAAGAACC...TATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR CAA 90 bp | TTTAGTCGCACCGGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCACAAAGAATTTTCTTTTaGCGGCTCCATGGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSRTGTSLGHFLTETPSPQRIFF*RLHGFL Trigger: CAAGAAGCCATGGAGCCGCAAAAAGAAAATTCTTTG...TGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR CAA 90 bp | GGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTTTTACCCCCTTTCCATaGGCTGTGCTAACTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GTSLGHFLTETPSPLTAFFTPFP*AVLTPQ Trigger: CTGTGGAGTTAGCACAGCCAATGGAAAGGGGGTAAA...AAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR CAA 90 bp | CACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTCCTGTTCCAATATGCAGACCTGAAGTGTGCTaGGTCCGAACTCGTAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HFLTETPSPLTAFPVPICRPEVC*VRTRKV Trigger: GACTTTACGAGTTCGGACCAAGCACACTTCAGGTCT...GCATATTGGAACAGGAAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
||
| CDS-3UTR CAA 90 bp | GGGACATCTCTAGGACACTTTCTTACTGAGACGCCAAGTCCATTAACAGCATTTAAATTCCTCTTGTGCTaGGAGGTTTTCCTTCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GTSLGHFLTETPSPLTAFKFLLC*EVFLPS Trigger: CGAGGGAAGGAAAACCTCCAAGCACAAGAGGAATTT...AAATGCTGTTAATGGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS-3UTR CAA 90 bp | GTTCCAATATGCAAGGAAATGCAAGGTGGCCTGTGGAGCCTGAGAAGTAAGATCGGCTTCAATGTCCACTaGGATTTCCATATTGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: VPICKEMQGGLWSLRSKIGFNVH*DFHIVA Trigger: TGCAACAATATGGAAATCCAAGTGGACATTGAAGCC...GATCTTACTTCTCAGGCTCCACAGGCCACCTTGCATTTCCTTGCATATTGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030584.11 |
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| CDS CCA 72 bp | CCGCCGCTGCGGCACTTAGGGTCGGGGGCGGCCGCATaGAGCGAGGTGGAGCGCGGCGACTCGGAGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PPLRHLGSGAAA*SEVERGDSESF Trigger: GAAGGACTCCGAGTCGCCGCGCTCCACCTCGCTCCATGCGGCCGCCCCCGACCCTAAGTGCCGCAGCGGCGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000168461.8 |
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| CDS CAA 72 bp | GGCGGGTCGGCCAGCAGCAGACGGATGTCGTGTGGGTaGAGCCGCTCGCTGCACTCGGGGCAGCTGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: GGSASSRRMSCG*SRSLHSGQLMG Trigger: GCCCATCAGCTGCCCCGAGTGCAGCGAGCGGCTCAACCCACACGACATCCGTCTGCTGCTGGCCGACCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000168461.8 |
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| CDS CAA 90 bp | TGCATGAGCGGCGGGTCGGCCAGCAGCAGACGGATGTCGTGTGGGTaGAGCCGCTCGCTGCACTCGGGGCAGCTGATGGGCACGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: CMSGGSASSRRMSCG*SRSLHSGQLMGTRL Trigger: GAGCCGCGTGCCCATCAGCTGCCCCGAGTGCAGCGAGCGGCTCAACCCACACGACATCCGTCTGCTGCTGGCCGACCCGCCGCTCATGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000168461.8 |
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| CDS CCA 72 bp | GAGCGGCGGGTCGGCCAGCAGCAGACGGATGTCGTGTaGGTTGAGCCGCTCGCTGCACTCGGGGCAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: ERRVGQQQTDVV*VEPLAALGAAD Trigger: ATCAGCTGCCCCGAGTGCAGCGAGCGGCTCAACCCACACGACATCCGTCTGCTGCTGGCCGACCCGCCGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000168461.8 |
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| CDS CAA 72 bp | GAGGCCAGGTACCGGCGCAGCATGAACTCTTCGTACTaGTGCATGAGCGGCGGGTCGGCCAGCAGCAGACGG | + |
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Preference number: 6 (lower is better) Translates to: EARYRRSMNSSY*CMSGGSASSRR Trigger: CCGTCTGCTGCTGGCCGACCCGCCGCTCATGCACAAGTACGAAGAGTTCATGCTGCGCCGGTACCTGGCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000168461.8 |
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| CDS CAA 90 bp | TCGGGGTCCGAGGCCAGGTACCGGCGCAGCATGAACTCTTCGTACTaGTGCATGAGCGGCGGGTCGGCCAGCAGCAGACGGATGTCGTGT | + |
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Preference number: 6 (lower is better) Translates to: SGSEARYRRSMNSSY*CMSGGSASSRRMSC Trigger: ACACGACATCCGTCTGCTGCTGGCCGACCCGCCGCTCATGCACAAGTACGAAGAGTTCATGCTGCGCCGGTACCTGGCCTCGGACCCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000168461.8 |
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| CDS GCA 72 bp | GCCAGGTACCGGCGCAGCATGAACTCTTCGTACTTGTaGATGAGCGGCGGGTCGGCCAGCAGCAGACGGATG | + |
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Preference number: 6 (lower is better) Translates to: ARYRRSMNSSYL*MSGGSASSRRM Trigger: CATCCGTCTGCTGCTGGCCGACCCGCCGCTCATGCACAAGTACGAAGAGTTCATGCTGCGCCGGTACCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000168461.8 |
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| CDS TCA 72 bp | GCCGCTGGAGAGAATACCACCACTCAGTGTGCCCCCTaGGAGGGCAGCGAAGCTGGCTGTCTCGCTGTATGG | + |
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Preference number: 6 (lower is better) Translates to: AAGENTTTQCAP*EGSEAGCLAVW Trigger: CCATACAGCGAGACAGCCAGCTTCGCTGCCCTCTCAGGGGGCACACTGAGTGGTGGTATTCTCTCCAGCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000130803.3 ENSMUST00000152565.8 ENSMUST00000168461.8 |
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| CDS TCA 72 bp | CAGCATGGGAGCGGGGCGAGCCACACTCATCTGAGGTaGTGTCTGGCACGTCATCTGACTGCGTGTCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: QHGSGASHTHLR*CLARHLTACQS Trigger: GCTCTGACACGCAGTCAGATGACGTGCCAGACATCACCTCAGATGAGTGTGGCTCGCCCCGCTCCCATGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000168461.8 |
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| CDS TCA 72 bp | CCAGCACCATTACCCTCTTCTTCCTTCTCTGCCACCTaGGCATGGACATGGAGCGAGTCCTCTGTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PAPLPSSSFSAT*AWTWSESSVLL Trigger: CAGCAGCACAGAGGACTCGCTCCATGTCCATGCTCAGGTGGCAGAGAAGGAAGAAGAGGGTAATGGTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000168461.8 |
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| CDS GCA 72 bp | CCACCTGAGCATGGACATGGAGCGAGTCCTCTGTGCTaGTGCCACTCACCAACTGATAGTGACTTGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: PPEHGHGASPLC*CHSPTDSDLVW Trigger: CCAAACCAAGTCACTATCAGTTGGTGAGTGGCAGCAGCACAGAGGACTCGCTCCATGTCCATGCTCAGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000168461.8 |
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| CDS GCA 72 bp | CTGCCACCTGAGCATGGACATGGAGCGAGTCCTCTGTaGTGCTGCCACTCACCAACTGATAGTGACTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LPPEHGHGASPL*CCHSPTDSDLV Trigger: AACCAAGTCACTATCAGTTGGTGAGTGGCAGCAGCACAGAGGACTCGCTCCATGTCCATGCTCAGGTGGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000168461.8 |
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| CDS GCA 72 bp | CATCAGCTTGAACTTCTAACCGGCTGTACTTTCCCTTaGCGCTGGAGAGAATACCACCACTCAGTGTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: HQLELLTGCTFP*RWREYHHSVCP Trigger: GGGGCACACTGAGTGGTGGTATTCTCTCCAGCGGCAAGGGAAAGTACAGCCGGTTAGAAGTTCAAGCTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000130803.3 ENSMUST00000168461.8 |
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| CDS GCA 72 bp | GGAACTGATTATGGAACCGGCCATAGCACGAGTGCTTaGGCTGTCGCTAATTGCACCAAGACTGGCTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: GTDYGTGHSTSA*AVANCTKTGCV Trigger: GACACAGCCAGTCTTGGTGCAATTAGCGACAGCGCAAGCACTCGTGCTATGGCCGGTTCCATAATCAGTTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000130803.3 ENSMUST00000168461.8 |
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| CDS CCA 72 bp | CTTGAACTTCTAACCGGCTGTACTTTCCCTTGCCGCTaGAGAGAATACCACCACTCAGTGTGCCCCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LELLTGCTFPCR*REYHHSVCPLR Trigger: TCTCAGGGGGCACACTGAGTGGTGGTATTCTCTCCAGCGGCAAGGGAAAGTACAGCCGGTTAGAAGTTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000130803.3 ENSMUST00000168461.8 |
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| CDS GCA 72 bp | ACCGGCCATAGCACGAGTGCTTGCGCTGTCGCTAATTaGACCAAGACTGGCTGTGTCTTTGGGGAAAATTTC | + |
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Preference number: 6 (lower is better) Translates to: TGHSTSACAVAN*TKTGCVFGENF Trigger: GAAATTTTCCCCAAAGACACAGCCAGTCTTGGTGCAATTAGCGACAGCGCAAGCACTCGTGCTATGGCCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000130803.3 ENSMUST00000168461.8 |
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| CDS GCA 72 bp | CCACAGTGGCTGCTGTCTGGACGCCCCATCCTTTACTaGATAAGGCAGCAGGTAAACCAACTGATAGTGACT | + |
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Preference number: 6 (lower is better) Translates to: PQWLLSGRPILY*IRQQVNQLIVT Trigger: AGTCACTATCAGTTGGTTTACCTGCTGCCTTATGCAGTAAAGGATGGGGCGTCCAGACAGCAGCCACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130803.3 |
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| CDS TCA 72 bp | TTGTGCTTGGAGGTTTTCCTTCCCTCGTACCTGCTGTaGATCTTTCTCCCCACGTATACAGGGATGCCGATG | + |
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Preference number: 6 (lower is better) Translates to: LCLEVFLPSYLL*IFLPTYTGMPM Trigger: CATCGGCATCCCTGTATACGTGGGGAGAAAGATTCACAGCAGGTACGAGGGAAGGAAAACCTCCAAGCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000152565.8 ENSMUST00000168461.8 |
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| CDS GCA 72 bp | TCCTCTTGTGCTTGGAGGTTTTCCTTCCCTCGTACCTaGTGTGAATCTTTCTCCCCACGTATACAGGGATGC | + |
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Preference number: 6 (lower is better) Translates to: SSCAWRFSFPRT*CESFSPRIQGC Trigger: GCATCCCTGTATACGTGGGGAGAAAGATTCACAGCAGGTACGAGGGAAGGAAAACCTCCAAGCACAAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000152565.8 ENSMUST00000168461.8 |
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| CDS CCA 72 bp | ATTCATCTTGATAATGTAAGCACTGCATCGTGGGCATaGCTTGATGTCATCTGCTGGTCCAGATTCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: IHLDNVSTASWA*LDVICWSRFLP Trigger: GGGCAAGAATCTGGACCAGCAGATGACATCAAGCCATGCCCACGATGCAGTGCTTACATTATCAAGATGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 |
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| CDS CAA 72 bp | CCTCTGTGCTGCTGCCACTCACCAACTGATAGTGACTaGGTTTGGCTTCAATGTCCACTTGGATTTCCATAT | + |
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Preference number: 6 (lower is better) Translates to: PLCCCHSPTDSD*VWLQCPLGFPY Trigger: ATATGGAAATCCAAGTGGACATTGAAGCCAAACCAAGTCACTATCAGTTGGTGAGTGGCAGCAGCACAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000168461.8 |
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| CDS CCA 72 bp | CTCTGTGCTGCTGCCACTCACCAACTGATAGTGACTTaGTTTGGCTTCAATGTCCACTTGGATTTCCATATT | + |
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Preference number: 6 (lower is better) Translates to: LCAAATHQLIVT*FGFNVHLDFHI Trigger: AATATGGAAATCCAAGTGGACATTGAAGCCAAACCAAGTCACTATCAGTTGGTGAGTGGCAGCAGCACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030584.11 ENSMUST00000097874.9 ENSMUST00000168461.8 |
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| CDS CCA 72 bp | ATTCATCTTGATAATGTAAGCACTGCATCGTGGGCATaGCTTGATGTCATCTGGTCCAGATTCTTGCCCGTA | + |
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Preference number: 6 (lower is better) Translates to: IHLDNVSTASWA*LDVIWSRFLPV Trigger: TACGGGCAAGAATCTGGACCAGATGACATCAAGCCATGCCCACGATGCAGTGCTTACATTATCAAGATGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152565.8 ENSMUST00000168461.8 |
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| CDS CAA 72 bp | CTGCATAAGGCAGCAGGTAAACCAACTGATAGTGACTaGGTTTGGCTTCAATGTCCACTTGGATTTCCATAT | + |
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Preference number: 6 (lower is better) Translates to: LHKAAGKPTDSD*VWLQCPLGFPY Trigger: ATATGGAAATCCAAGTGGACATTGAAGCCAAACCAAGTCACTATCAGTTGGTTTACCTGCTGCCTTATGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130803.3 |
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| CDS CCA 72 bp | TGCATAAGGCAGCAGGTAAACCAACTGATAGTGACTTaGTTTGGCTTCAATGTCCACTTGGATTTCCATATT | + |
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Preference number: 6 (lower is better) Translates to: CIRQQVNQLIVT*FGFNVHLDFHI Trigger: AATATGGAAATCCAAGTGGACATTGAAGCCAAACCAAGTCACTATCAGTTGGTTTACCTGCTGCCTTATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130803.3 |
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