Pregenerated sensors for RNF19A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022280Ensembl transcript IDs: ENSMUST00000022890.10, ENSMUST00000228358.2
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ACAGGAAGCAGCTTTGGAAAGCAGAGCGCTGCTGCACTGGTGTGGTaGGTTCTCCAGTCGGTCGTTTTCTACCTCAGGAAGGGTGTTCAC | + |
Preference number: 1 (lower is better) Translates to: TGSSFGKQSAAALVW*VLQSVVFYLRKGVH Trigger: GTGAACACCCTTCCTGAGGTAGAAAACGACCGACTGGAGAACTCACCACACCAGTGCAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR GCA 90 bp | CAGCTAAAAGAGCTGGCACTAGTGTTCTCTAAGCAGATTAATGGATaGAGCGAGGAAAACGACGGACGGCACACGGCTGCAGCCCGGACA | + |
Preference number: 1 (lower is better) Translates to: QLKELALVFSKQING*SEENDGRHTAAART Trigger: TGTCCGGGCTGCAGCCGTGTGCCGTCCGTCGTTTTCCTCGCTGCATCCATTAATCTGCTTAGAGAACACTAGTGCCAGCTCTTTTAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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3UTR GCA 90 bp | GTGGGACATCTGAACAGGAAGCAGCTTTGGAAAGCAGAGCGCTGCTaGACTGGTGTGGTGAGTTCTCCAGTCGGTCGTTTTCTACCTCAG | + |
Preference number: 1 (lower is better) Translates to: VGHLNRKQLWKAERC*TGVVSSPVGRFLPQ Trigger: CTGAGGTAGAAAACGACCGACTGGAGAACTCACCACACCAGTGCAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTTCAGATGTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR GCA 90 bp | GCTGTGGGACATCTGAACAGGAAGCAGCTTTGGAAAGCAGAGCGCTaGTGCACTGGTGTGGTGAGTTCTCCAGTCGGTCGTTTTCTACCT | + |
Preference number: 1 (lower is better) Translates to: AVGHLNRKQLWKAER*CTGVVSSPVGRFLP Trigger: AGGTAGAAAACGACCGACTGGAGAACTCACCACACCAGTGCAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTTCAGATGTCCCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR CCA 90 bp | ACATCTGAACAGGAAGCAGCTTTGGAAAGCAGAGCGCTGCTGCACTaGTGTGGTGAGTTCTCCAGTCGGTCGTTTTCTACCTCAGGAAGG | + |
Preference number: 1 (lower is better) Translates to: TSEQEAALESRALLH*CGEFSSRSFSTSGR Trigger: CCTTCCTGAGGTAGAAAACGACCGACTGGAGAACTCACCACACCAGTGCAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTTCAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR TCA 90 bp | AGGGTGTTCACAGCTGTGAAGCGGGCGTGGCAATCACTGGAGCCGTaGCTACAGGACGTTCTCATGCTTTCTAAGTCTGAGCAGCTAAAT | + |
Preference number: 1 (lower is better) Translates to: RVFTAVKRAWQSLEP*LQDVLMLSKSEQLN Trigger: ATTTAGCTGCTCAGACTTAGAAAGCATGAGAACGTCCTGTAGTCACGGCTCCAGTGATTGCCACGCCCGCTTCACAGCTGTGAACACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR TCA 90 bp | AAAAATGACTGGAGTGGGAATCTGCTACAGACGGCATGCTGTCACTaGGGGATGGCGCCTCAAACTCACTTGAGTTCGTGCTTTGTTGCT | + |
Preference number: 1 (lower is better) Translates to: KNDWSGNLLQTACCH*GMAPQTHLSSCFVA Trigger: AGCAACAAAGCACGAACTCAAGTGAGTTTGAGGCGCCATCCCTCAGTGACAGCATGCCGTCTGTAGCAGATTCCCACTCCAGTCATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR GCA 90 bp | TCACTGAGGGATGGCGCCTCAAACTCACTTGAGTTCGTGCTTTGTTaGTCTAACAACTGTGCATCCATGTCCTCTCTGGTCTCATTGATC | + |
Preference number: 1 (lower is better) Translates to: SLRDGASNSLEFVLC*SNNCASMSSLVSLI Trigger: GATCAATGAGACCAGAGAGGACATGGATGCACAGTTGTTAGAGCAACAAAGCACGAACTCAAGTGAGTTTGAGGCGCCATCCCTCAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR GCA 90 bp | GCATTCACGGGCCTAAATTTCAGTCTGGACAGCAACTTTCAGGTCTaGTGTCTGGTGCGAGTGGTTATTATTTGTCTCTCTCAGTGCATC | + |
Preference number: 1 (lower is better) Translates to: AFTGLNFSLDSNFQV*CLVRVVIICLSQCI Trigger: GATGCACTGAGAGAGACAAATAATAACCACTCGCACCAGACAGCAGACCTGAAAGTTGCTGTCCAGACTGAAATTTAGGCCCGTGAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR GCA 90 bp | ATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTaGAGCATTCACGGGCCTAAATTTCAGTCTGGACAGCAACTTTCA | + |
Preference number: 1 (lower is better) Translates to: MVQPAPNTVVQWFLL*SIHGPKFQSGQQLS Trigger: TGAAAGTTGCTGTCCAGACTGAAATTTAGGCCCGTGAATGCTGCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR CCA 90 bp | TCTGCCACTGTCAGTCCCTTAGTTACCTTTTACCGTCTTCTAAAATaGCAACAACCACACTTGAGATATGTAACAGTACCAAGTATTTCT | + |
Preference number: 1 (lower is better) Translates to: SATVSPLVTFYRLLK*QQPHLRYVTVPSIS Trigger: AGAAATACTTGGTACTGTTACATATCTCAAGTGTGGTTGTTGCCATTTTAGAAGACGGTAAAAGGTAACTAAGGGACTGACAGTGGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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3UTR-3UTR TCA 90 bp | TGGTGCCATGCTCGTCTGCAGCATGGCTGGGCTGTGGGACATCTGAACAGGAAGCCTCTCTGGTCTCATTaGTCTTCATGTTACCCTTTT | + |
Preference number: 2 (lower is better) Translates to: WCHARLQHGWAVGHLNRKPLWSH*SSCYPF Trigger: AAAAGGGTAACATGAAGATCAATGAGACCAGAGAGG...CTTCCTGTTCAGATGTCCCACAGCCCAGCCATGCTGCAGACGAGCATGGCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR-3UTR CCA 90 bp | TACTCTGCAGCATTCACGGGCCTAAATTTCAGTCTGGACAGCAACTTTCAGGTCTGCTCGTCTGCAGCATaGCTGGGCTGTGGGACATCT | + |
Preference number: 2 (lower is better) Translates to: YSAAFTGLNFSLDSNFQVCSSAA*LGCGTS Trigger: AGATGTCCCACAGCCCAGCCATGCTGCAGACGAGCA...GACCTGAAAGTTGCTGTCCAGACTGAAATTTAGGCCCGTGAATGCTGCAGAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR-3UTR CCA 90 bp | CTGCTGCACTGGTGTGGTGAGTTCTCCAGTCGGTCGTTTTCTACCTCAGGAAGGATTCAGAAAAATGACTaGAGTGGGAATCTGCTACAG | + |
Preference number: 2 (lower is better) Translates to: LLHWCGEFSSRSFSTSGRIQKND*SGNLLQ Trigger: CTGTAGCAGATTCCCACTCCAGTCATTTTTCTGAAT...CCTTCCTGAGGTAGAAAACGACCGACTGGAGAACTCACCACACCAGTGCAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR CAA 90 bp | CTTAAGCTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTaGTTCAGTGGTTCTTACTCTGCAGCATTCACGGGCCTAAATTTC | + |
Preference number: 2 (lower is better) Translates to: LKLNSRTWFNQLPTR*FSGSYSAAFTGLNF Trigger: GAAATTTAGGCCCGTGAATGCTGCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAGCTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR-3UTR TCA 90 bp | TTTTCTACCTCAGGAAGGGTGTTCACAGCTGTGAAGCGGGCGTGGCAATCACTGTTTGCATTACGATTATaGAACCTGGCTTTTGCTGGT | + |
Preference number: 2 (lower is better) Translates to: FSTSGRVFTAVKRAWQSLFALRL*NLAFAG Trigger: ACCAGCAAAAGCCAGGTTTCATAATCGTAATGCAAA...CAGTGATTGCCACGCCCGCTTCACAGCTGTGAACACCCTTCCTGAGGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR-3UTR CCA 90 bp | ACGAGGCTCATAAAACCCAGTCTCTCCCAAAGGCACCAAGAATCAAAGGGCACTTACCGTCTTCTAAAATaGCAACAACCACACTTGAGA | + |
Preference number: 2 (lower is better) Translates to: TRLIKPSLSQRHQESKGTYRLLK*QQPHLR Trigger: TCTCAAGTGTGGTTGTTGCCATTTTAGAAGACGGTA...AGTGCCCTTTGATTCTTGGTGCCTTTGGGAGAGACTGGGTTTTATGAGCCTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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3UTR-3UTR GCA 90 bp | ACGAGGCTCATAAAACCCAGTCTCTCCCAAAGGCACCAAGAATCAAAGGGCACTAAATACACAGGTATGTaGATCAAGCAGTGTTTTGTG | + |
Preference number: 2 (lower is better) Translates to: TRLIKPSLSQRHQESKGTKYTGM*IKQCFV Trigger: CACAAAACACTGCTTGATGCACATACCTGTGTATTT...AGTGCCCTTTGATTCTTGGTGCCTTTGGGAGAGACTGGGTTTTATGAGCCTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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3UTR-3UTR CCA 90 bp | GCCACCATCTTGCTCAAGTGTCTAAGTATCCAAATGGTTACCAATGGGCTGCATAACACGGTTGTTCAGTaGTTCTTACTCTGCAGCATT | + |
Preference number: 2 (lower is better) Translates to: ATILLKCLSIQMVTNGLHNTVVQ*FLLCSI Trigger: AATGCTGCAGAGTAAGAACCACTGAACAACCGTGTT...ATGCAGCCCATTGGTAACCATTTGGATACTTAGACACTTGAGCAAGATGGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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3UTR-3UTR TCA 90 bp | TGGTTACCAATGGGCTGCATTAAGCTTGATATCCACATTGCATATGAAGAAATGCGCCTCAAACTCACTTaGGTTCGTGCTTTGTTGCTC | + |
Preference number: 2 (lower is better) Translates to: WLPMGCIKLDIHIAYEEMRLKLT*VRALLL Trigger: GAGCAACAAAGCACGAACTCAAGTGAGTTTGAGGCG...CATTTCTTCATATGCAATGTGGATATCAAGCTTAATGCAGCCCATTGGTAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR-3UTR CCA 90 bp | TGGTTATTATTTGTCTCTCTCAGTGCATCACCAAAACACAAATCCACCATAGGCCTTAACAGTCGCACATaGTTCAACCAGCTCCCAACA | + |
Preference number: 2 (lower is better) Translates to: WLLFVSLSASPKHKSTIGLNSRT*FNQLPT Trigger: TGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG...GCCTATGGTGGATTTGTGTTTTGGTGATGCACTGAGAGAGACAAATAATAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR CAA 90 bp | TACCAAGTATTTCTACTTCAGAGTTGTGCAAAAACTGCCACCATCTaGCTCAAGTGTCTAAGTATCCAAATGGTTACCAATGGGCTGCAT | + |
Preference number: 2 (lower is better) Translates to: YQVFLLQSCAKTATI*LKCLSIQMVTNGLH Trigger: ATGCAGCCCATTGGTAACCATTTGGATACTTAGACACTTGAGCAAGATGGTGGCAGTTTTTGCACAACTCTGAAGTAGAAATACTTGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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3UTR-3UTR TCA 90 bp | AAAGAGCTGGCACTAGTGTTCTCTAAGCAGATTAATGGATGCAGCGAGGAAAACTGTGTCTTTGGTAGGTaGATACTTTTTCAGTGTAGT | + |
Preference number: 2 (lower is better) Translates to: KELALVFSKQINGCSEENCVFGR*ILFQCS Trigger: ACTACACTGAAAAAGTATTCACCTACCAAAGACACA...GTTTTCCTCGCTGCATCCATTAATCTGCTTAGAGAACACTAGTGCCAGCTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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3UTR-3UTR GCA 90 bp | TGGTTACCAATGGGCTGCATTAAGCTTGATATCCACATTGCATATGAAGAAATGGAGTTCGTGCTTTGTTaGTCTAACAACTGTGCATCC | + |
Preference number: 2 (lower is better) Translates to: WLPMGCIKLDIHIAYEEMEFVLC*SNNCAS Trigger: GGATGCACAGTTGTTAGAGCAACAAAGCACGAACTC...CATTTCTTCATATGCAATGTGGATATCAAGCTTAATGCAGCCCATTGGTAACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR CAA 90 bp | CCCTTAGTTACCTTTTACCGTCTTCTAAAATGGCAACAACCACACTaGAGATATGTAACAGTACCAAGTATTTCTACTTCAGAGTTGTGC | + |
Preference number: 2 (lower is better) Translates to: PLVTFYRLLKWQQPH*RYVTVPSISTSELC Trigger: GCACAACTCTGAAGTAGAAATACTTGGTACTGTTACATATCTCAAGTGTGGTTGTTGCCATTTTAGAAGACGGTAAAAGGTAACTAAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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3UTR TCA 72 bp | GGTCGTTTTCTACCTCAGGAAGGGTGTTCACAGCTGTaGAGCGGGCGTGGCAATCACTGGAGCCGTGACTAC | + |
Preference number: 3 (lower is better) Translates to: GRFLPQEGCSQL*SGRGNHWSRDY Trigger: GTAGTCACGGCTCCAGTGATTGCCACGCCCGCTTCACAGCTGTGAACACCCTTCCTGAGGTAGAAAACGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR TCA 72 bp | ATGCTCGTCTGCAGCATGGCTGGGCTGTGGGACATCTaGACAGGAAGCAGCTTTGGAAAGCAGAGCGCTGCT | + |
Preference number: 3 (lower is better) Translates to: MLVCSMAGLWDI*TGSSFGKQSAA Trigger: AGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTTCAGATGTCCCACAGCCCAGCCATGCTGCAGACGAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR TCA 72 bp | TGGAGTGGGAATCTGCTACAGACGGCATGCTGTCACTaGGGGATGGCGCCTCAAACTCACTTGAGTTCGTGC | + |
Preference number: 3 (lower is better) Translates to: WSGNLLQTACCH*GMAPQTHLSSC Trigger: GCACGAACTCAAGTGAGTTTGAGGCGCCATCCCTCAGTGACAGCATGCCGTCTGTAGCAGATTCCCACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR GCA 72 bp | CATCTGAACAGGAAGCAGCTTTGGAAAGCAGAGCGCTaGTGCACTGGTGTGGTGAGTTCTCCAGTCGGTCGT | + |
Preference number: 3 (lower is better) Translates to: HLNRKQLWKAER*CTGVVSSPVGR Trigger: ACGACCGACTGGAGAACTCACCACACCAGTGCAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTTCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR CCA 72 bp | CAGGAAGCAGCTTTGGAAAGCAGAGCGCTGCTGCACTaGTGTGGTGAGTTCTCCAGTCGGTCGTTTTCTACC | + |
Preference number: 3 (lower is better) Translates to: QEAALESRALLH*CGEFSSRSFST Trigger: GGTAGAAAACGACCGACTGGAGAACTCACCACACCAGTGCAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR TCA 72 bp | ACAGCTGTGAAGCGGGCGTGGCAATCACTGGAGCCGTaGCTACAGGACGTTCTCATGCTTTCTAAGTCTGAG | + |
Preference number: 3 (lower is better) Translates to: TAVKRAWQSLEP*LQDVLMLSKSE Trigger: CTCAGACTTAGAAAGCATGAGAACGTCCTGTAGTCACGGCTCCAGTGATTGCCACGCCCGCTTCACAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR GCA 72 bp | GAGCTGGCACTAGTGTTCTCTAAGCAGATTAATGGATaGAGCGAGGAAAACGACGGACGGCACACGGCTGCA | + |
Preference number: 3 (lower is better) Translates to: ELALVFSKQING*SEENDGRHTAA Trigger: TGCAGCCGTGTGCCGTCCGTCGTTTTCCTCGCTGCATCCATTAATCTGCTTAGAGAACACTAGTGCCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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3UTR GCA 72 bp | CTGAACAGGAAGCAGCTTTGGAAAGCAGAGCGCTGCTaGACTGGTGTGGTGAGTTCTCCAGTCGGTCGTTTT | + |
Preference number: 3 (lower is better) Translates to: LNRKQLWKAERC*TGVVSSPVGRF Trigger: AAAACGACCGACTGGAGAACTCACCACACCAGTGCAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR-3UTR CAA 90 bp | ACGAGGCTCATAAAACCCAGTCTCTCCCAAAGGCACCAAGAATCAAAGGGCACTGAACAGGAAGCAGCTTaGGAAAGCAGAGCGCTGCTG | + |
Preference number: 3 (lower is better) Translates to: TRLIKPSLSQRHQESKGTEQEAA*ESRALL Trigger: CAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTTC...AGTGCCCTTTGATTCTTGGTGCCTTTGGGAGAGACTGGGTTTTATGAGCCTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR GCA 72 bp | CCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTaGAGCATTCACGGGCCTAAATTTCAGTCTGGACAG | + |
Preference number: 3 (lower is better) Translates to: PAPNTVVQWFLL*SIHGPKFQSGQ Trigger: CTGTCCAGACTGAAATTTAGGCCCGTGAATGCTGCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR GCA 72 bp | GATGGCGCCTCAAACTCACTTGAGTTCGTGCTTTGTTaGTCTAACAACTGTGCATCCATGTCCTCTCTGGTC | + |
Preference number: 3 (lower is better) Translates to: DGASNSLEFVLC*SNNCASMSSLV Trigger: GACCAGAGAGGACATGGATGCACAGTTGTTAGAGCAACAAAGCACGAACTCAAGTGAGTTTGAGGCGCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR CCA 72 bp | CACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTaGTTCTTACTCTGCAGCATTCACGGGCCTAAATTT | + |
Preference number: 3 (lower is better) Translates to: HMVQPAPNTVVQ*FLLCSIHGPKF Trigger: AAATTTAGGCCCGTGAATGCTGCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR-3UTR CAA 90 bp | ACGAGGCTCATAAAACCCAGTCTCTCCCAAAGGCACCAAGAATCAAAGGGCACTTGGGCTGCATTAAGCTaGATATCCACATTGCATATG | + |
Preference number: 3 (lower is better) Translates to: TRLIKPSLSQRHQESKGTWAALS*ISTLHM Trigger: CATATGCAATGTGGATATCAAGCTTAATGCAGCCCA...AGTGCCCTTTGATTCTTGGTGCCTTTGGGAGAGACTGGGTTTTATGAGCCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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3UTR-3UTR CAA 90 bp | GCTGTGTGGGAAGTCAATAGTGCAGGCAGTATTTTGGCCAACTTCTGCTCGTGTTGGCAACAACCACACTaGAGATATGTAACAGTACCA | + |
Preference number: 3 (lower is better) Translates to: AVWEVNSAGSILANFCSCWQQPH*RYVTVP Trigger: TGGTACTGTTACATATCTCAAGTGTGGTTGTTGCCA...ACACGAGCAGAAGTTGGCCAAAATACTGCCTGCACTATTGACTTCCCACACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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3UTR-3UTR CAA 90 bp | ACGAGGCTCATAAAACCCAGTCTCTCCCAAAGGCACCAAGAATCAAAGGGCACTTGGCAACAACCACACTaGAGATATGTAACAGTACCA | + |
Preference number: 3 (lower is better) Translates to: TRLIKPSLSQRHQESKGTWQQPH*RYVTVP Trigger: TGGTACTGTTACATATCTCAAGTGTGGTTGTTGCCA...AGTGCCCTTTGATTCTTGGTGCCTTTGGGAGAGACTGGGTTTTATGAGCCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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3UTR GCA 72 bp | TCAGTCTGGACAGCAACTTTCAGGTCTGCTGTCTGGTaGGAGTGGTTATTATTTGTCTCTCTCAGTGCATCA | + |
Preference number: 3 (lower is better) Translates to: SVWTATFRSAVW*EWLLFVSLSAS Trigger: TGATGCACTGAGAGAGACAAATAATAACCACTCGCACCAGACAGCAGACCTGAAAGTTGCTGTCCAGACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR GCA 72 bp | GGCCTAAATTTCAGTCTGGACAGCAACTTTCAGGTCTaGTGTCTGGTGCGAGTGGTTATTATTTGTCTCTCT | + |
Preference number: 3 (lower is better) Translates to: GLNFSLDSNFQV*CLVRVVIICLS Trigger: AGAGAGACAAATAATAACCACTCGCACCAGACAGCAGACCTGAAAGTTGCTGTCCAGACTGAAATTTAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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3UTR-3UTR CAA 90 bp | GTAATCTGCCACGTTCCATCCCTTAGTGGTTTCAATAAAATGTCACTAACCACTAAAACTGCCACCATCTaGCTCAAGTGTCTAAGTATC | + |
Preference number: 3 (lower is better) Translates to: VICHVPSLSGFNKMSLTTKTATI*LKCLSI Trigger: GATACTTAGACACTTGAGCAAGATGGTGGCAGTTTT...AGTGGTTAGTGACATTTTATTGAAACCACTAAGGGATGGAACGTGGCAGATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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3UTR CCA 72 bp | CTTGCTCAAGTGTCTAAGTATCCAAATGGTTACCAATaGGCTGCATTAAGCTTGATATCCACATTGCATATG | + |
Preference number: 3 (lower is better) Translates to: LAQVSKYPNGYQ*AALSLISTLHM Trigger: CATATGCAATGTGGATATCAAGCTTAATGCAGCCCATTGGTAACCATTTGGATACTTAGACACTTGAGCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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3UTR CCA 72 bp | GTCAGTCCCTTAGTTACCTTTTACCGTCTTCTAAAATaGCAACAACCACACTTGAGATATGTAACAGTACCA | + |
Preference number: 3 (lower is better) Translates to: VSPLVTFYRLLK*QQPHLRYVTVP Trigger: TGGTACTGTTACATATCTCAAGTGTGGTTGTTGCCATTTTAGAAGACGGTAAAAGGTAACTAAGGGACTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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3UTR-3UTR CAA 90 bp | ATTTCATGTCTGCTGTTCACACACTCATTACTGAACAAAATTGGAATGCAAACAAGCCTGAGTGTGTCTTaGGTAGGTGAATACTTTTTC | + |
Preference number: 3 (lower is better) Translates to: ISCLLFTHSLLNKIGMQTSLSVS*VGEYFF Trigger: GAAAAAGTATTCACCTACCAAAGACACACTCAGGCT...TGTTTGCATTCCAATTTTGTTCAGTAATGAGTGTGTGAACAGCAGACATGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | CTGCTGCACTGGTGTGGTGAGTTCTCCAGTCGGTCGTTTTCTACCTCAGGAAGGAGCGTATCCACAGTCTaGAGCCGGACACCACCTACA | + |
Preference number: 4 (lower is better) Translates to: LLHWCGEFSSRSFSTSGRSVSTV*SRTPPT Trigger: TGTAGGTGGTGTCCGGCTCCAGACTGTGGATACGCT...CCTTCCTGAGGTAGAAAACGACCGACTGGAGAACTCACCACACCAGTGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | TCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGCCGATTACAGACAGGGTaGCACCGCCTGCTATGGCCA | + |
Preference number: 4 (lower is better) Translates to: SHMVQPAPNTVVQWFLLCRLQTG*HRLLWP Trigger: TGGCCATAGCAGGCGGTGTCACCCTGTCTGTAATCG...GCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | TGGTGCCATGCTCGTCTGCAGCATGGCTGGGCTGTGGGACATCTGAACAGGAAGCAGGTCTGGTTTGGATaGCAGATCTGTTTACAGTGG | + |
Preference number: 4 (lower is better) Translates to: WCHARLQHGWAVGHLNRKQVWFG*QICLQW Trigger: CCACTGTAAACAGATCTGGCATCCAAACCAGACCTG...CTTCCTGTTCAGATGTCCCACAGCCCAGCCATGCTGCAGACGAGCATGGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
||
CDS-3UTR CCA 90 bp | GCTGTGTGGGAAGTCAATAGTGCAGGCAGTATTTTGGCCAACTTCTGCTCGTGTCGTCTGCAGCATGGCTaGGCTGTGGGACATCTGAAC | + |
Preference number: 4 (lower is better) Translates to: AVWEVNSAGSILANFCSCRLQHG*AVGHLN Trigger: GTTCAGATGTCCCACAGCCCAGCCATGCTGCAGACG...ACACGAGCAGAAGTTGGCCAAAATACTGCCTGCACTATTGACTTCCCACACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | TGGGAAGTCAATAGTGCAGGCAGTATTTTGGCCAACTTCTGCTCGTGTCAGCTGTGCTCGTCTGCAGCATaGCTGGGCTGTGGGACATCT | + |
Preference number: 4 (lower is better) Translates to: WEVNSAGSILANFCSCQLCSSAA*LGCGTS Trigger: AGATGTCCCACAGCCCAGCCATGCTGCAGACGAGCA...CAGCTGACACGAGCAGAAGTTGGCCAAAATACTGCCTGCACTATTGACTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
||
CDS-3UTR TCA 90 bp | CTGCTGCACTGGTGTGGTGAGTTCTCCAGTCGGTCGTTTTCTACCTCAGGAAGGCATCCACTCCACCATTaGGCTCCCTTGATTTTCGTT | + |
Preference number: 4 (lower is better) Translates to: LLHWCGEFSSRSFSTSGRHPLHH*APLIFV Trigger: AACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATG...CCTTCCTGAGGTAGAAAACGACCGACTGGAGAACTCACCACACCAGTGCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | TTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTTGGCAATGCCAGCTATaGGAGCAATCCCTACGGGAG | + |
Preference number: 4 (lower is better) Translates to: LTVAHGSTSSQHGCSVVLWQCQL*EQSLRE Trigger: CTCCCGTAGGGATTGCTCTCATAGCTGGCATTGCCA...AAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | ACGAGGCTCATAAAACCCAGTCTCTCCCAAAGGCACCAAGAATCAAAGGGCACTCCTACAGTCAGGATCTaGAACAAGCCACCGTCGAAG | + |
Preference number: 4 (lower is better) Translates to: TRLIKPSLSQRHQESKGTPTVRI*NKPPSK Trigger: CTTCGACGGTGGCTTGTTGCAGATCCTGACTGTAGG...AGTGCCCTTTGATTCTTGGTGCCTTTGGGAGAGACTGGGTTTTATGAGCCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | GCCACCATCTTGCTCAAGTGTCTAAGTATCCAAATGGTTACCAATGGGCTGCATCACTTGCACTCAAACTaGCAGTCAGGCCGCCGACAC | + |
Preference number: 4 (lower is better) Translates to: ATILLKCLSIQMVTNGLHHLHSN*QSGRRH Trigger: GTGTCGGCGGCCTGACTGGCAGTTTGAGTGCAAGTG...ATGCAGCCCATTGGTAACCATTTGGATACTTAGACACTTGAGCAAGATGGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
||
CDS-3UTR GCA 90 bp | GTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGCATGTGGCTTCCACTTaGACTCAAACTGCCAGTCAG | + |
Preference number: 4 (lower is better) Translates to: VAHGSTSSQHGCSVVLTLHVAST*TQTASQ Trigger: CTGACTGGCAGTTTGAGTGCAAGTGGAAGCCACATG...CAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | TGGTGCCATGCTCGTCTGCAGCATGGCTGGGCTGTGGGACATCTGAACAGGAAGTTAGTTTTGGACAGCTaGCACATCCAAATGCTATCA | + |
Preference number: 4 (lower is better) Translates to: WCHARLQHGWAVGHLNRKLVLDS*HIQMLS Trigger: TGATAGCATTTGGATGTGCCAGCTGTCCAAAACTAA...CTTCCTGTTCAGATGTCCCACAGCCCAGCCATGCTGCAGACGAGCATGGCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR CCA 90 bp | CTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTAACAGGAAGCAGCTTTaGAAAGCAGAGCGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: LNSRTWFNQLPTRLFSGSNRKQL*KAERCC Trigger: GCAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTT...AGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
||
CDS-3UTR TCA 90 bp | TACTCTGCAGCATTCACGGGCCTAAATTTCAGTCTGGACAGCAACTTTCAGGTCGTTTGGGTGCCTTTTTaGCAGAAGGCAAGCTCACGG | + |
Preference number: 4 (lower is better) Translates to: YSAAFTGLNFSLDSNFQVVWVPF*QKASSR Trigger: CCGTGAGCTTGCCTTCTGTCAAAAAGGCACCCAAAC...GACCTGAAAGTTGCTGTCCAGACTGAAATTTAGGCCCGTGAATGCTGCAGAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
||
CDS-3UTR TCA 90 bp | CATCTGAACAGGAAGCAGCTTTGGAAAGCAGAGCGCTGCTGCACTGGTGTGGTGACAGCACATGTCATATaGTTGCAACTCCCATCATTC | + |
Preference number: 4 (lower is better) Translates to: HLNRKQLWKAERCCTGVVTAHVI*LQLPSF Trigger: GAATGATGGGAGTTGCAATCATATGACATGTGCTGT...CACCACACCAGTGCAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTTCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | AACTCACTTGAGTTCGTGCTTTGTTGCTCTAACAACTGTGCATCCATGTCCTCTCGATTACAGACAGGGTaGCACCGCCTGCTATGGCCA | + |
Preference number: 4 (lower is better) Translates to: NSLEFVLCCSNNCASMSSRLQTG*HRLLWP Trigger: TGGCCATAGCAGGCGGTGTCACCCTGTCTGTAATCG...AGAGGACATGGATGCACAGTTGTTAGAGCAACAAAGCACGAACTCAAGTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | GCTGTGTGGGAAGTCAATAGTGCAGGCAGTATTTTGGCCAACTTCTGCTCGTGTCACTGTCATCCACACTaGTGCTTCCACTGTTGTGTC | + |
Preference number: 4 (lower is better) Translates to: AVWEVNSAGSILANFCSCHCHPH*CFHCCV Trigger: GACACAACAGTGGAAGCAGCAGTGTGGATGACAGTG...ACACGAGCAGAAGTTGGCCAAAATACTGCCTGCACTATTGACTTCCCACACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | CTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTCCACTTGCACTTCCATaGTGTTCCCTTCTCTATGGC | + |
Preference number: 4 (lower is better) Translates to: LNSRTWFNQLPTRLFSGSPLALP*CSLLYG Trigger: GCCATAGAGAAGGGAACAGCATGGAAGTGCAAGTGG...AGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | TTTTCTACCTCAGGAAGGGTGTTCACAGCTGTGAAGCGGGCGTGGCAATCACTGATCAAGCGAATGTCATaGGGATTAAACCGTTCAGTG | + |
Preference number: 4 (lower is better) Translates to: FSTSGRVFTAVKRAWQSLIKRMS*GLNRSV Trigger: CACTGAACGGTTTAATCCTCATGACATTCGCTTGAT...CAGTGATTGCCACGCCCGCTTCACAGCTGTGAACACCCTTCCTGAGGTAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | TTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTCGCCTCAAACTCACTTaGGTTCGTGCTTTGTTGCTC | + |
Preference number: 4 (lower is better) Translates to: LTVAHGSTSSQHGCSVVLRLKLT*VRALLL Trigger: GAGCAACAAAGCACGAACTCAAGTGAGTTTGAGGCG...AAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR TCA 90 bp | AAAGAGCTGGCACTAGTGTTCTCTAAGCAGATTAATGGATGCAGCGAGGAAAACGGGCTGTGGGACATCTaGACAGGAAGCAGCTTTGGA | + |
Preference number: 4 (lower is better) Translates to: KELALVFSKQINGCSEENGLWDI*TGSSFG Trigger: TCCAAAGCTGCTTCCTGTTCAGATGTCCCACAGCCC...GTTTTCCTCGCTGCATCCATTAATCTGCTTAGAGAACACTAGTGCCAGCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | TCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGCCCTTCTCTGTTTGGGTaGCTTTTTGACAGAAGGCAA | + |
Preference number: 4 (lower is better) Translates to: SHMVQPAPNTVVQWFLLCPSLFG*LFDRRQ Trigger: TTGCCTTCTGTCAAAAAGGCACCCAAACAGAGAAGG...GCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | CTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTCAGGTCTGGTTTGGATaGCAGATCTGTTTACAGTGG | + |
Preference number: 4 (lower is better) Translates to: LNSRTWFNQLPTRLFSGSQVWFG*QICLQW Trigger: CCACTGTAAACAGATCTGGCATCCAAACCAGACCTG...AGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | CTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTCCTATGCTAGGGTTGTaGCTTGCTTCTGCTACTGAT | + |
Preference number: 4 (lower is better) Translates to: LNSRTWFNQLPTRLFSGSPMLGL*LASATD Trigger: ATCAGTAGCAGAAGCAAGGCACAACCCTAGCATAGG...AGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | TTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTTGTCATCCACACTGCTaGTTCCACTGTTGTGTCGGA | + |
Preference number: 4 (lower is better) Translates to: LTVAHGSTSSQHGCSVVLCHPHC*FHCCVG Trigger: TCCGACACAACAGTGGAAGCAGCAGTGTGGATGACA...AAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | TACTCTGCAGCATTCACGGGCCTAAATTTCAGTCTGGACAGCAACTTTCAGGTCTGTCATCCACACTGCTaGTTCCACTGTTGTGTCGGA | + |
Preference number: 4 (lower is better) Translates to: YSAAFTGLNFSLDSNFQVCHPHC*FHCCVG Trigger: TCCGACACAACAGTGGAAGCAGCAGTGTGGATGACA...GACCTGAAAGTTGCTGTCCAGACTGAAATTTAGGCCCGTGAATGCTGCAGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | GTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGGAGTTCGTGCTTTGTTaGTCTAACAACTGTGCATCC | + |
Preference number: 4 (lower is better) Translates to: VAHGSTSSQHGCSVVLTLEFVLC*SNNCAS Trigger: GGATGCACAGTTGTTAGAGCAACAAAGCACGAACTC...CAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | GTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGTACAGGACGTTCTCATaGTTTCTAAGTCTGAGCAGC | + |
Preference number: 4 (lower is better) Translates to: VAHGSTSSQHGCSVVLTLYRTFS*FLSLSS Trigger: GCTGCTCAGACTTAGAAAGCATGAGAACGTCCTGTA...CAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | GTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGAGGTCTGCTGTCTGGTaGGAGTGGTTATTATTTGTC | + |
Preference number: 4 (lower is better) Translates to: VAHGSTSSQHGCSVVLTLRSAVW*EWLLFV Trigger: GACAAATAATAACCACTCGCACCAGACAGCAGACCT...CAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | GTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGGCTGTCTGGTGCGAGTaGTTATTATTTGTCTCTCTC | + |
Preference number: 4 (lower is better) Translates to: VAHGSTSSQHGCSVVLTLAVWCE*LLFVSL Trigger: GAGAGAGACAAATAATAACCACTCGCACCAGACAGC...CAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR TCA 90 bp | CTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTGTACTTCCAACCTGTTaGAACAGTTTACCATGGCAC | + |
Preference number: 4 (lower is better) Translates to: LNSRTWFNQLPTRLFSGSVLPTC*NSLPWH Trigger: GTGCCATGGTAAACTGTTTCAACAGGTTGGAAGTAC...AGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR TCA 90 bp | GTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGCCTCTCTGGTCTCATTaGTCTTCATGTTACCCTTTT | + |
Preference number: 4 (lower is better) Translates to: VAHGSTSSQHGCSVVLTLPLWSH*SSCYPF Trigger: AAAAGGGTAACATGAAGATCAATGAGACCAGAGAGG...CAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | CTGCTGCACTGGTGTGGTGAGTTCTCCAGTCGGTCGTTTTCTACCTCAGGAAGGAATCTGTCTTTAGAATaGCGTAAAAGGCACAAAGGA | + |
Preference number: 4 (lower is better) Translates to: LLHWCGEFSSRSFSTSGRNLSLE*RKRHKG Trigger: TCCTTTGTGCCTTTTACGGCATTCTAAAGACAGATT...CCTTCCTGAGGTAGAAAACGACCGACTGGAGAACTCACCACACCAGTGCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | TACTCTGCAGCATTCACGGGCCTAAATTTCAGTCTGGACAGCAACTTTCAGGTCGCTGGCACATCCAAATaGTATCACAGCGTATCCACA | + |
Preference number: 4 (lower is better) Translates to: YSAAFTGLNFSLDSNFQVAGTSK*YHSVST Trigger: TGTGGATACGCTGTGATAGCATTTGGATGTGCCAGC...GACCTGAAAGTTGCTGTCCAGACTGAAATTTAGGCCCGTGAATGCTGCAGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR CCA 90 bp | TGGGAAGTCAATAGTGCAGGCAGTATTTTGGCCAACTTCTGCTCGTGTCAGCTGAGCACATCGTGGACATaGCTTTATATCATCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: WEVNSAGSILANFCSCQLSTSWT*LYIISC Trigger: GCAGCTGATGATATAAAGCCATGTCCACGATGTGCT...CAGCTGACACGAGCAGAAGTTGGCCAAAATACTGCCTGCACTATTGACTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | CTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTCGGCAGAGAGAAATTaGGACCACACCATAGACATA | + |
Preference number: 4 (lower is better) Translates to: LNSRTWFNQLPTRLFSGSSAERN*DHTIDI Trigger: TATGTCTATGGTGTGGTCCCAATTTCTCTCTGCCGA...AGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | TACTCTGCAGCATTCACGGGCCTAAATTTCAGTCTGGACAGCAACTTTCAGGTCACCATTGAGCTCCCTTaGTTTTCGTTTGCTGTCCTT | + |
Preference number: 4 (lower is better) Translates to: YSAAFTGLNFSLDSNFQVTIELP*FSFAVL Trigger: AAGGACAGCAAACGAAAATCAAGGGAGCTCAATGGT...GACCTGAAAGTTGCTGTCCAGACTGAAATTTAGGCCCGTGAATGCTGCAGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | CTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTGAACTTGAATGGCTTTaGCTCAATATCCACTTGCAC | + |
Preference number: 4 (lower is better) Translates to: LNSRTWFNQLPTRLFSGSELEWL*LNIHLH Trigger: GTGCAAGTGGATATTGAGTCAAAGCCATTCAAGTTC...AGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | TCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGCTATACTCTCAATACTTaGAATTCCATCCACTCCACC | + |
Preference number: 4 (lower is better) Translates to: SHMVQPAPNTVVQWFLLCYTLNT*NSIHST Trigger: GGTGGAGTGGATGGAATTGCAAGTATTGAGAGTATA...GCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | TACTCTGCAGCATTCACGGGCCTAAATTTCAGTCTGGACAGCAACTTTCAGGTCTATATCATCAGCTGCTaGTCCAGATTCCTGGCTGTA | + |
Preference number: 4 (lower is better) Translates to: YSAAFTGLNFSLDSNFQVYIISC*SRFLAV Trigger: TACAGCCAGGAATCTGGAGCAGCAGCTGATGATATA...GACCTGAAAGTTGCTGTCCAGACTGAAATTTAGGCCCGTGAATGCTGCAGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | TGTTGCTCTAACAACTGTGCATCCATGTCCTCTCTGGTCTCATTGATCTTCATGCACTGTCATCCACACTaGTGCTTCCACTGTTGTGTC | + |
Preference number: 4 (lower is better) Translates to: CCSNNCASMSSLVSLIFMHCHPH*CFHCCV Trigger: GACACAACAGTGGAAGCAGCAGTGTGGATGACAGTG...CATGAAGATCAATGAGACCAGAGAGGACATGGATGCACAGTTGTTAGAGCAACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | AAAGAGCTGGCACTAGTGTTCTCTAAGCAGATTAATGGATGCAGCGAGGAAAACAGCAACTTTCAGGTCTaGTGTCTGGTGCGAGTGGTT | + |
Preference number: 4 (lower is better) Translates to: KELALVFSKQINGCSEENSNFQV*CLVRVV Trigger: AACCACTCGCACCAGACAGCAGACCTGAAAGTTGCT...GTTTTCCTCGCTGCATCCATTAATCTGCTTAGAGAACACTAGTGCCAGCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | GAAACAAAGCCACACGTAGACCTTTTATATAAGCTTGGTACAAGCTCTGCATTGAGCGTATCCACAGTCTaGAGCCGGACACCACCTACA | + |
Preference number: 4 (lower is better) Translates to: ETKPHVDLLYKLGTSSALSVSTV*SRTPPT Trigger: TGTAGGTGGTGTCCGGCTCCAGACTGTGGATACGCT...CAATGCAGAGCTTGTACCAAGCTTATATAAAAGGTCTACGTGTGGCTTTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | TCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGCTTAGTTTTGGACAGCTaGCACATCCAAATGCTATCA | + |
Preference number: 4 (lower is better) Translates to: SHMVQPAPNTVVQWFLLCLVLDS*HIQMLS Trigger: TGATAGCATTTGGATGTGCCAGCTGTCCAAAACTAA...GCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CCA 90 bp | ACGAGGCTCATAAAACCCAGTCTCTCCCAAAGGCACCAAGAATCAAAGGGCACTATCACAGGTCTGGTTTaGATGCCAGATCTGTTTACA | + |
Preference number: 4 (lower is better) Translates to: TRLIKPSLSQRHQESKGTITGLV*MPDLFT Trigger: TGTAAACAGATCTGGCATCCAAACCAGACCTGTGAT...AGTGCCCTTTGATTCTTGGTGCCTTTGGGAGAGACTGGGTTTTATGAGCCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CCA 90 bp | TACTCTGCAGCATTCACGGGCCTAAATTTCAGTCTGGACAGCAACTTTCAGGTCCTTAAGCGTAAACTTTaGGCTCTTTCCTGTCGAGCA | + |
Preference number: 4 (lower is better) Translates to: YSAAFTGLNFSLDSNFQVLKRKL*ALSCRA Trigger: TGCTCGACAGGAAAGAGCCCAAAGTTTACGCTTAAG...GACCTGAAAGTTGCTGTCCAGACTGAAATTTAGGCCCGTGAATGCTGCAGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR CCA 90 bp | TTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTTCGGCAGAGAGAAATTaGGACCACACCATAGACATA | + |
Preference number: 4 (lower is better) Translates to: LTVAHGSTSSQHGCSVVLSAERN*DHTIDI Trigger: TATGTCTATGGTGTGGTCCCAATTTCTCTCTGCCGA...AAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | TTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACAGCACATGTCATATaGTTGCAACTCCCATCATTC | + |
Preference number: 4 (lower is better) Translates to: LTVAHGSTSSQHGCSVVLTAHVI*LQLPSF Trigger: GAATGATGGGAGTTGCAATCATATGACATGTGCTGT...AAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
||
CDS-3UTR TCA 90 bp | TACCAAAAGAAAATGCTCAGTAGCACCATAATGGTAACACTTAGAGGAAACACCTGGCAATGCCAGCTATaGGAGCAATCCCTACGGGAG | + |
Preference number: 4 (lower is better) Translates to: YQKKMLSSTIMVTLRGNTWQCQL*EQSLRE Trigger: CTCCCGTAGGGATTGCTCTCATAGCTGGCATTGCCA...GGTGTTTCCTCTAAGTGTTACCATTATGGTGCTACTGAGCATTTTCTTTTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR TCA 90 bp | GCCACCATCTTGCTCAAGTGTCTAAGTATCCAAATGGTTACCAATGGGCTGCATAGACATAAGCTAGCATaGTGGGAACACCAATGCCTA | + |
Preference number: 4 (lower is better) Translates to: ATILLKCLSIQMVTNGLHRHKLA*WEHQCL Trigger: TAGGCATTGGTGTTCCCATCATGCTAGCTTATGTCT...ATGCAGCCCATTGGTAACCATTTGGATACTTAGACACTTGAGCAAGATGGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | GAAACAAAGCCACACGTAGACCTTTTATATAAGCTTGGTACAAGCTCTGCATTGGAGGGATGTAGGAGTTaGGAATGGATCCCGCCATTG | + |
Preference number: 4 (lower is better) Translates to: ETKPHVDLLYKLGTSSALEGCRS*EWIPPL Trigger: CAATGGCGGGATCCATTCTCAACTCCTACATCCCTC...CAATGCAGAGCTTGTACCAAGCTTATATAAAAGGTCTACGTGTGGCTTTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
||
CDS-3UTR TCA 90 bp | CTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTGTTGTGTCGGAACTTaGATGGCTTTGACTCAATAT | + |
Preference number: 4 (lower is better) Translates to: LNSRTWFNQLPTRLFSGSCCVGT*MALTQY Trigger: ATATTGAGTCAAAGCCATTCAAGTTCCGACACAACA...AGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | GCCACCATCTTGCTCAAGTGTCTAAGTATCCAAATGGTTACCAATGGGCTGCATGACTCAATATCCACTTaGACTTCCATGCTGTTCCCT | + |
Preference number: 4 (lower is better) Translates to: ATILLKCLSIQMVTNGLHDSIST*TSMLFP Trigger: AGGGAACAGCATGGAAGTGCAAGTGGATATTGAGTC...ATGCAGCCCATTGGTAACCATTTGGATACTTAGACACTTGAGCAAGATGGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CCA 90 bp | TCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGCACACAAGATCTATGGTaGCATGTCATTATATCAGGA | + |
Preference number: 4 (lower is better) Translates to: SHMVQPAPNTVVQWFLLCTQDLW*HVIISG Trigger: TCCTGATATAATGACATGCCACCATAGATCTTGTGT...GCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | GCCACCATCTTGCTCAAGTGTCTAAGTATCCAAATGGTTACCAATGGGCTGCATAAAGAGAGAGCCTATTaGAATCCTTCTCTGTTTGGG | + |
Preference number: 4 (lower is better) Translates to: ATILLKCLSIQMVTNGLHKERAY*NPSLFG Trigger: CCCAAACAGAGAAGGATTTCAATAGGCTCTCTCTTT...ATGCAGCCCATTGGTAACCATTTGGATACTTAGACACTTGAGCAAGATGGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | GCCACCATCTTGCTCAAGTGTCTAAGTATCCAAATGGTTACCAATGGGCTGCATATCAAGCGAATGTCATaGGGATTAAACCGTTCAGTG | + |
Preference number: 4 (lower is better) Translates to: ATILLKCLSIQMVTNGLHIKRMS*GLNRSV Trigger: CACTGAACGGTTTAATCCTCATGACATTCGCTTGAT...ATGCAGCCCATTGGTAACCATTTGGATACTTAGACACTTGAGCAAGATGGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | GAAACAAAGCCACACGTAGACCTTTTATATAAGCTTGGTACAAGCTCTGCATTGTGCCAGACTCTCCACTaGGACTACACCGTTCTTTCT | + |
Preference number: 4 (lower is better) Translates to: ETKPHVDLLYKLGTSSALCQTLH*DYTVLS Trigger: AGAAAGAACGGTGTAGTCTCAGTGGAGAGTCTGGCA...CAATGCAGAGCTTGTACCAAGCTTATATAAAAGGTCTACGTGTGGCTTTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | TGGGAAGTCAATAGTGCAGGCAGTATTTTGGCCAACTTCTGCTCGTGTCAGCTGAATCTGTCTTTAGAATaGCGTAAAAGGCACAAAGGA | + |
Preference number: 4 (lower is better) Translates to: WEVNSAGSILANFCSCQLNLSLE*RKRHKG Trigger: TCCTTTGTGCCTTTTACGGCATTCTAAAGACAGATT...CAGCTGACACGAGCAGAAGTTGGCCAAAATACTGCCTGCACTATTGACTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | AAAGAGCTGGCACTAGTGTTCTCTAAGCAGATTAATGGATGCAGCGAGGAAAACGACTCAATATCCACTTaGACTTCCATGCTGTTCCCT | + |
Preference number: 4 (lower is better) Translates to: KELALVFSKQINGCSEENDSIST*TSMLFP Trigger: AGGGAACAGCATGGAAGTGCAAGTGGATATTGAGTC...GTTTTCCTCGCTGCATCCATTAATCTGCTTAGAGAACACTAGTGCCAGCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | GCTGTGTGGGAAGTCAATAGTGCAGGCAGTATTTTGGCCAACTTCTGCTCGTGTTCCACACAAGATCTATaGTGGCATGTCATTATATCA | + |
Preference number: 4 (lower is better) Translates to: AVWEVNSAGSILANFCSCSTQDL*WHVIIS Trigger: TGATATAATGACATGCCACCATAGATCTTGTGTGGA...ACACGAGCAGAAGTTGGCCAAAATACTGCCTGCACTATTGACTTCCCACACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | AACTCACTTGAGTTCGTGCTTTGTTGCTCTAACAACTGTGCATCCATGTCCTCTAGCACATCGTGGACATaGCTTTATATCATCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: NSLEFVLCCSNNCASMSSSTSWT*LYIISC Trigger: GCAGCTGATGATATAAAGCCATGTCCACGATGTGCT...AGAGGACATGGATGCACAGTTGTTAGAGCAACAAAGCACGAACTCAAGTGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | TTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTAATGCTCATCAGAATTaGGTCAGAGTCAATGTTCAT | + |
Preference number: 4 (lower is better) Translates to: LTVAHGSTSSQHGCSVVLNAHQN*VRVNVH Trigger: ATGAACATTGACTCTGACTCAATTCTGATGAGCATT...AAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | TACCAAAAGAAAATGCTCAGTAGCACCATAATGGTAACACTTAGAGGAAACACCAATGGATCCCGCCATTaGTTTGGTGCTGGCGTTATC | + |
Preference number: 4 (lower is better) Translates to: YQKKMLSSTIMVTLRGNTNGSRH*FGAGVI Trigger: GATAACGCCAGCACCAAAGCAATGGCGGGATCCATT...GGTGTTTCCTCTAAGTGTTACCATTATGGTGCTACTGAGCATTTTCTTTTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | TGGTTACCAATGGGCTGCATTAAGCTTGATATCCACATTGCATATGAAGAAATGCCACTTGCACTTCCATaGTGTTCCCTTCTCTGTCCA | + |
Preference number: 4 (lower is better) Translates to: WLPMGCIKLDIHIAYEEMPLALP*CSLLCP Trigger: TGGACAGAGAAGGGAACAGCATGGAAGTGCAAGTGG...CATTTCTTCATATGCAATGTGGATATCAAGCTTAATGCAGCCCATTGGTAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR TCA 90 bp | ATTTCATGTCTGCTGTTCACACACTCATTACTGAACAAAATTGGAATGCAAACAGTTTGGGTGCCTTTTTaGCAGAAGGCAAGCTCACGG | + |
Preference number: 4 (lower is better) Translates to: ISCLLFTHSLLNKIGMQTVWVPF*QKASSR Trigger: CCGTGAGCTTGCCTTCTGTCAAAAAGGCACCCAAAC...TGTTTGCATTCCAATTTTGTTCAGTAATGAGTGTGTGAACAGCAGACATGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR TCA 90 bp | GAAACAAAGCCACACGTAGACCTTTTATATAAGCTTGGTACAAGCTCTGCATTGACCATTGAGCTCCCTTaGTTTTCGTTTGCTGTCCTT | + |
Preference number: 4 (lower is better) Translates to: ETKPHVDLLYKLGTSSALTIELP*FSFAVL Trigger: AAGGACAGCAAACGAAAATCAAGGGAGCTCAATGGT...CAATGCAGAGCTTGTACCAAGCTTATATAAAAGGTCTACGTGTGGCTTTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR TCA 90 bp | TACCAAAAGAAAATGCTCAGTAGCACCATAATGGTAACACTTAGAGGAAACACCCATCCACTCCACCATTaGGCTCCCTTGATTTTCGTT | + |
Preference number: 4 (lower is better) Translates to: YQKKMLSSTIMVTLRGNTHPLHH*APLIFV Trigger: AACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATG...GGTGTTTCCTCTAAGTGTTACCATTATGGTGCTACTGAGCATTTTCTTTTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR TCA 90 bp | AACTCACTTGAGTTCGTGCTTTGTTGCTCTAACAACTGTGCATCCATGTCCTCTTGTTGTGTCGGAACTTaGATGGCTTTGACTCAATAT | + |
Preference number: 4 (lower is better) Translates to: NSLEFVLCCSNNCASMSSCCVGT*MALTQY Trigger: ATATTGAGTCAAAGCCATTCAAGTTCCGACACAACA...AGAGGACATGGATGCACAGTTGTTAGAGCAACAAAGCACGAACTCAAGTGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | TACTCTGCAGCATTCACGGGCCTAAATTTCAGTCTGGACAGCAACTTTCAGGTCAACTCATGTCTAAAATaGTCATCAGAATTGAGTCAG | + |
Preference number: 4 (lower is better) Translates to: YSAAFTGLNFSLDSNFQVNSCLK*SSELSQ Trigger: CTGACTCAATTCTGATGAGCATTTTAGACATGAGTT...GACCTGAAAGTTGCTGTCCAGACTGAAATTTAGGCCCGTGAATGCTGCAGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | GTAATCTGCCACGTTCCATCCCTTAGTGGTTTCAATAAAATGTCACTAACCACTCCTTCTCTGTTTGGGTaGCTTTTTGACAGAAGGCAA | + |
Preference number: 4 (lower is better) Translates to: VICHVPSLSGFNKMSLTTPSLFG*LFDRRQ Trigger: TTGCCTTCTGTCAAAAAGGCACCCAAACAGAGAAGG...AGTGGTTAGTGACATTTTATTGAAACCACTAAGGGATGGAACGTGGCAGATTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | ATTTCATGTCTGCTGTTCACACACTCATTACTGAACAAAATTGGAATGCAAACACCTACAGTCAGGATCTaGAACAAGCCACCGTCGAAG | + |
Preference number: 4 (lower is better) Translates to: ISCLLFTHSLLNKIGMQTPTVRI*NKPPSK Trigger: CTTCGACGGTGGCTTGTTGCAGATCCTGACTGTAGG...TGTTTGCATTCCAATTTTGTTCAGTAATGAGTGTGTGAACAGCAGACATGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | TGGTTACCAATGGGCTGCATTAAGCTTGATATCCACATTGCATATGAAGAAATGGCTGGCACATCCAAATaGTATCACAGCGTATCCACA | + |
Preference number: 4 (lower is better) Translates to: WLPMGCIKLDIHIAYEEMAGTSK*YHSVST Trigger: TGTGGATACGCTGTGATAGCATTTGGATGTGCCAGC...CATTTCTTCATATGCAATGTGGATATCAAGCTTAATGCAGCCCATTGGTAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | AAAGAGCTGGCACTAGTGTTCTCTAAGCAGATTAATGGATGCAGCGAGGAAAACTTCTTTCTGTACGTCTaGTTGTACTTCCAACCTGTT | + |
Preference number: 4 (lower is better) Translates to: KELALVFSKQINGCSEENFFLYV*LYFQPV Trigger: AACAGGTTGGAAGTACAAGCAGACGTACAGAAAGAA...GTTTTCCTCGCTGCATCCATTAATCTGCTTAGAGAACACTAGTGCCAGCTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | AAAGAGCTGGCACTAGTGTTCTCTAAGCAGATTAATGGATGCAGCGAGGAAAACACTCACTTGAGTTCGTaGTTTGTTGCTCTAACAACT | + |
Preference number: 4 (lower is better) Translates to: KELALVFSKQINGCSEENTHLSS*FVALTT Trigger: AGTTGTTAGAGCAACAAAGCACGAACTCAAGTGAGT...GTTTTCCTCGCTGCATCCATTAATCTGCTTAGAGAACACTAGTGCCAGCTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | GCCACCATCTTGCTCAAGTGTCTAAGTATCCAAATGGTTACCAATGGGCTGCATTCCACACAAGATCTATaGTGGCATGTCATTATATCA | + |
Preference number: 4 (lower is better) Translates to: ATILLKCLSIQMVTNGLHSTQDL*WHVIIS Trigger: TGATATAATGACATGCCACCATAGATCTTGTGTGGA...ATGCAGCCCATTGGTAACCATTTGGATACTTAGACACTTGAGCAAGATGGTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CCA 90 bp | GTAATCTGCCACGTTCCATCCCTTAGTGGTTTCAATAAAATGTCACTAACCACTCTTAAGCGTAAACTTTaGGCTCTTTCCTGTCGAGCA | + |
Preference number: 4 (lower is better) Translates to: VICHVPSLSGFNKMSLTTLKRKL*ALSCRA Trigger: TGCTCGACAGGAAAGAGCCCAAAGTTTACGCTTAAG...AGTGGTTAGTGACATTTTATTGAAACCACTAAGGGATGGAACGTGGCAGATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | TGGTTACCAATGGGCTGCATTAAGCTTGATATCCACATTGCATATGAAGAAATGAGACATAAGCTAGCATaGTGGGAACACCAATGCCTA | + |
Preference number: 4 (lower is better) Translates to: WLPMGCIKLDIHIAYEEMRHKLA*WEHQCL Trigger: TAGGCATTGGTGTTCCCATCATGCTAGCTTATGTCT...CATTTCTTCATATGCAATGTGGATATCAAGCTTAATGCAGCCCATTGGTAACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR GCA 90 bp | TGGTTACCAATGGGCTGCATTAAGCTTGATATCCACATTGCATATGAAGAAATGCTTTATATCATCAGCTaGTGCTCCAGATTCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: WLPMGCIKLDIHIAYEEMLYIIS*CSRFLA Trigger: AGCCAGGAATCTGGAGCAGCAGCTGATGATATAAAG...CATTTCTTCATATGCAATGTGGATATCAAGCTTAATGCAGCCCATTGGTAACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CCA 90 bp | AAAGAGCTGGCACTAGTGTTCTCTAAGCAGATTAATGGATGCAGCGAGGAAAACACACAAGATCTATGGTaGCATGTCATTATATCAGGA | + |
Preference number: 4 (lower is better) Translates to: KELALVFSKQINGCSEENTQDLW*HVIISG Trigger: TCCTGATATAATGACATGCCACCATAGATCTTGTGT...GTTTTCCTCGCTGCATCCATTAATCTGCTTAGAGAACACTAGTGCCAGCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | GAAACAAAGCCACACGTAGACCTTTTATATAAGCTTGGTACAAGCTCTGCATTGATCACAGGTCTGGTTTaGATGCCAGATCTGTTTACA | + |
Preference number: 4 (lower is better) Translates to: ETKPHVDLLYKLGTSSALITGLV*MPDLFT Trigger: TGTAAACAGATCTGGCATCCAAACCAGACCTGTGAT...CAATGCAGAGCTTGTACCAAGCTTATATAAAAGGTCTACGTGTGGCTTTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR TCA 90 bp | GAAACAAAGCCACACGTAGACCTTTTATATAAGCTTGGTACAAGCTCTGCATTGAATGCTCATCAGAATTaGGTCAGAGTCAATGTTCAT | + |
Preference number: 4 (lower is better) Translates to: ETKPHVDLLYKLGTSSALNAHQN*VRVNVH Trigger: ATGAACATTGACTCTGACTCAATTCTGATGAGCATT...CAATGCAGAGCTTGTACCAAGCTTATATAAAAGGTCTACGTGTGGCTTTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | ATTTCATGTCTGCTGTTCACACACTCATTACTGAACAAAATTGGAATGCAAACATATATCATCAGCTGCTaGTCCAGATTCCTGGCTGTA | + |
Preference number: 4 (lower is better) Translates to: ISCLLFTHSLLNKIGMQTYIISC*SRFLAV Trigger: TACAGCCAGGAATCTGGAGCAGCAGCTGATGATATA...TGTTTGCATTCCAATTTTGTTCAGTAATGAGTGTGTGAACAGCAGACATGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | ATTTCATGTCTGCTGTTCACACACTCATTACTGAACAAAATTGGAATGCAAACACTTTATATCATCAGCTaGTGCTCCAGATTCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: ISCLLFTHSLLNKIGMQTLYIIS*CSRFLA Trigger: AGCCAGGAATCTGGAGCAGCAGCTGATGATATAAAG...TGTTTGCATTCCAATTTTGTTCAGTAATGAGTGTGTGAACAGCAGACATGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | TACCAAAAGAAAATGCTCAGTAGCACCATAATGGTAACACTTAGAGGAAACACCCCGTTCAGTGCATTCTaGACAACTGATATTAACTCT | + |
Preference number: 4 (lower is better) Translates to: YQKKMLSSTIMVTLRGNTPFSAF*TTDINS Trigger: AGAGTTAATATCAGTTGTCCAGAATGCACTGAACGG...GGTGTTTCCTCTAAGTGTTACCATTATGGTGCTACTGAGCATTTTCTTTTGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | ATTTCATGTCTGCTGTTCACACACTCATTACTGAACAAAATTGGAATGCAAACACCTATTCGATCCATGTaGCTTCCACTTGCACTCAAA | + |
Preference number: 4 (lower is better) Translates to: ISCLLFTHSLLNKIGMQTPIRSM*LPLALK Trigger: TTTGAGTGCAAGTGGAAGCCACATGGATCGAATAGG...TGTTTGCATTCCAATTTTGTTCAGTAATGAGTGTGTGAACAGCAGACATGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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3UTR CAA 72 bp | TTTCTACTTCAGAGTTGTGCAAAAACTGCCACCATCTaGCTCAAGTGTCTAAGTATCCAAATGGTTACCAAT | + |
Preference number: 4 (lower is better) Translates to: FLLQSCAKTATI*LKCLSIQMVTN Trigger: ATTGGTAACCATTTGGATACTTAGACACTTGAGCAAGATGGTGGCAGTTTTTGCACAACTCTGAAGTAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR TCA 90 bp | ATTTCATGTCTGCTGTTCACACACTCATTACTGAACAAAATTGGAATGCAAACAGAACTTGAATGGCTTTaGCTCAATATCCACTTGCAC | + |
Preference number: 4 (lower is better) Translates to: ISCLLFTHSLLNKIGMQTELEWL*LNIHLH Trigger: GTGCAAGTGGATATTGAGTCAAAGCCATTCAAGTTC...TGTTTGCATTCCAATTTTGTTCAGTAATGAGTGTGTGAACAGCAGACATGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CCA 90 bp | ATTTCATGTCTGCTGTTCACACACTCATTACTGAACAAAATTGGAATGCAAACAATTCAGAAAAATGACTaGAGTGGGAATCTGCTACAG | + |
Preference number: 4 (lower is better) Translates to: ISCLLFTHSLLNKIGMQTIQKND*SGNLLQ Trigger: CTGTAGCAGATTCCCACTCCAGTCATTTTTCTGAAT...TGTTTGCATTCCAATTTTGTTCAGTAATGAGTGTGTGAACAGCAGACATGAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR GCA 90 bp | ATTTCATGTCTGCTGTTCACACACTCATTACTGAACAAAATTGGAATGCAAACAAACTCATGTCTAAAATaGTCATCAGAATTGAGTCAG | + |
Preference number: 4 (lower is better) Translates to: ISCLLFTHSLLNKIGMQTNSCLK*SSELSQ Trigger: CTGACTCAATTCTGATGAGCATTTTAGACATGAGTT...TGTTTGCATTCCAATTTTGTTCAGTAATGAGTGTGTGAACAGCAGACATGAAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS CCA 90 bp | GCACTGGATTTACCTTCGGGCAAGCCACTGGACGCCCCGCCTGTGTaGCCTCGGGTAGCACCACTGTCATCCACACTGCTGCTTCCACTG | + |
Preference number: 5 (lower is better) Translates to: ALDLPSGKPLDAPPV*PRVAPLSSTLLLPL Trigger: CAGTGGAAGCAGCAGTGTGGATGACAGTGGTGCTACCCGAGGCCACACAGGCGGGGCGTCCAGTGGCTTGCCCGAAGGTAAATCCAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS GCA 90 bp | CTGCCAGTCAGGCCGCCGACACTTCCCTCTCCTATGCTAGGGTTGTaGCTTGCTTCTGCTACTGATGTTGTATCTATGGCTGCGTTAGTC | + |
Preference number: 5 (lower is better) Translates to: LPVRPPTLPSPMLGL*LASATDVVSMAALV Trigger: GACTAACGCAGCCATAGATACAACATCAGTAGCAGAAGCAAGGCACAACCCTAGCATAGGAGAGGGAAGTGTCGGCGGCCTGACTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CAA 90 bp | CTGCTGCACTGGTGTGGTGAGTTCTCCAGTCGGTCGTTTTCTACCTCAGGAAGGCCATCCACTCCACCATaGAGCTCCCTTGATTTTCGT | + |
Preference number: 5 (lower is better) Translates to: LLHWCGEFSSRSFSTSGRPSTPP*SSLDFR Trigger: ACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATGG...CCTTCCTGAGGTAGAAAACGACCGACTGGAGAACTCACCACACCAGTGCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS CCA 90 bp | ACTCTGTTCCACAGCCTTCTCGCCCACAAGTTAGTTTTGGACAGCTaGCACATCCAAATGCTATCACAGCGTATCCACAGTCTGGAGCCG | + |
Preference number: 5 (lower is better) Translates to: TLFHSLLAHKLVLDS*HIQMLSQRIHSLEP Trigger: CGGCTCCAGACTGTGGATACGCTGTGATAGCATTTGGATGTGCCAGCTGTCCAAAACTAACTTGTGGGCGAGAAGGCTGTGGAACAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | CTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTCTCACTCCTTTCCCATaGCCCGCAGAGACACCACAA | + |
Preference number: 5 (lower is better) Translates to: LNSRTWFNQLPTRLFSGSLTPFP*PAETPQ Trigger: TTGTGGTGTCTCTGCGGGCAATGGGAAAGGAGTGAG...AGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS TCA 90 bp | CTACAGTCACTGCAGCTACCACCGGAGACACGATTACAGACAGGGTaGCACCGCCTGCTATGGCCAGATTCCGCTTATGTTTTGAAACAT | + |
Preference number: 5 (lower is better) Translates to: LQSLQLPPETRLQTG*HRLLWPDSAYVLKH Trigger: ATGTTTCAAAACATAAGCGGAATCTGGCCATAGCAGGCGGTGTCACCCTGTCTGTAATCGTGTCTCCGGTGGTAGCTGCAGTGACTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | CTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTCTGCTGCTTCCACTGTaGTGTCGGAACTTGAATGGC | + |
Preference number: 5 (lower is better) Translates to: LNSRTWFNQLPTRLFSGSLLLPL*CRNLNG Trigger: GCCATTCAAGTTCCGACACAACAGTGGAAGCAGCAG...AGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | GTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGTCCCTTGATTTTCGTTaGCTGTCCTTCTTCCTCCGA | + |
Preference number: 5 (lower is better) Translates to: VAHGSTSSQHGCSVVLTLSLDFR*LSFFLR Trigger: TCGGAGGAAGAAGGACAGCAAACGAAAATCAAGGGA...CAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
||
CDS-3UTR CAA 90 bp | CATCTGAACAGGAAGCAGCTTTGGAAAGCAGAGCGCTGCTGCACTGGTGTGGTGGTATACTCTCAATACTaGCAATTCCATCCACTCCAC | + |
Preference number: 5 (lower is better) Translates to: HLNRKQLWKAERCCTGVVVYSQY*QFHPLH Trigger: GTGGAGTGGATGGAATTGCAAGTATTGAGAGTATAC...CACCACACCAGTGCAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTTCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | GTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGCATCACAGGTCTGGTTaGGATGCCAGATCTGTTTAC | + |
Preference number: 5 (lower is better) Translates to: VAHGSTSSQHGCSVVLTLHHRSG*DARSVY Trigger: GTAAACAGATCTGGCATCCAAACCAGACCTGTGATG...CAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | TGGTGCCATGCTCGTCTGCAGCATGGCTGGGCTGTGGGACATCTGAACAGGAAGGATTCCGCTTATGTTTaGAAACATCTTTGCCTTCAT | + |
Preference number: 5 (lower is better) Translates to: WCHARLQHGWAVGHLNRKDSAYV*KHLCLH Trigger: ATGAAGGCAAAGATGTTTCAAAACATAAGCGGAATC...CTTCCTGTTCAGATGTCCCACAGCCCAGCCATGCTGCAGACGAGCATGGCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | GCCACCATCTTGCTCAAGTGTCTAAGTATCCAAATGGTTACCAATGGGCTGCATCCTCCTGTTGCTTCCTaGGACCACTTGGTAGCACTG | + |
Preference number: 5 (lower is better) Translates to: ATILLKCLSIQMVTNGLHPPVAS*DHLVAL Trigger: CAGTGCTACCAAGTGGTCCAAGGAAGCAACAGGAGG...ATGCAGCCCATTGGTAACCATTTGGATACTTAGACACTTGAGCAAGATGGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS TCA 90 bp | AGACAGGGTGACACCGCCTGCTATGGCCAGATTCCGCTTATGTTTTaGAACATCTTTGCCTTCATAGCGATTATGAATCTTGCGGCCCAC | + |
Preference number: 5 (lower is better) Translates to: RQGDTACYGQIPLMF*NIFAFIAIMNLAAH Trigger: GTGGGCCGCAAGATTCATAATCGCTATGAAGGCAAAGATGTTTCAAAACATAAGCGGAATCTGGCCATAGCAGGCGGTGTCACCCTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS TCA 90 bp | CACCACTGTCATCCACACTGCTGCTTCCACTGTTGTGTCGGAACTTaGATGGCTTTGACTCAATATCCACTTGCACTTCCATGCTGTTCC | + |
Preference number: 5 (lower is better) Translates to: HHCHPHCCFHCCVGT*MALTQYPLALPCCS Trigger: GGAACAGCATGGAAGTGCAAGTGGATATTGAGTCAAAGCCATTCAAGTTCCGACACAACAGTGGAAGCAGCAGTGTGGATGACAGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | TTTTCTACCTCAGGAAGGGTGTTCACAGCTGTGAAGCGGGCGTGGCAATCACTGGAAATCCTTCTCTGTTaGGGTGCCTTTTTGACAGAA | + |
Preference number: 5 (lower is better) Translates to: FSTSGRVFTAVKRAWQSLEILLC*GAFLTE Trigger: TTCTGTCAAAAAGGCACCCAAACAGAGAAGGATTTC...CAGTGATTGCCACGCCCGCTTCACAGCTGTGAACACCCTTCCTGAGGTAGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS TCA 90 bp | ATCCACACTGCTGCTTCCACTGTTGTGTCGGAACTTGAATGGCTTTaGCTCAATATCCACTTGCACTTCCATGCTGTTCCCTTCTCTGTC | + |
Preference number: 5 (lower is better) Translates to: IHTAASTVVSELEWL*LNIHLHFHAVPFSV Trigger: GACAGAGAAGGGAACAGCATGGAAGTGCAAGTGGATATTGAGTCAAAGCCATTCAAGTTCCGACACAACAGTGGAAGCAGCAGTGTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS GCA 90 bp | CACCGCCTGCTATGGCCAGATTCCGCTTATGTTTTGAAACATCTTTaGCTTCATAGCGATTATGAATCTTGCGGCCCACGTACACAGGAA | + |
Preference number: 5 (lower is better) Translates to: HRLLWPDSAYVLKHL*LHSDYESCGPRTQE Trigger: TTCCTGTGTACGTGGGCCGCAAGATTCATAATCGCTATGAAGGCAAAGATGTTTCAAAACATAAGCGGAATCTGGCCATAGCAGGCGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS GCA 90 bp | TTATGTCATTCTCATCATCAAACTCAATCCTCACTCCTTTCCCATTaGCCGCAGAGACACCACAACCCCCACTTCGGCAGAGAGAAATTG | + |
Preference number: 5 (lower is better) Translates to: LCHSHHQTQSSLLSH*PQRHHNPHFGREKL Trigger: CAATTTCTCTCTGCCGAAGTGGGGGTTGTGGTGTCTCTGCGGGCAATGGGAAAGGAGTGAGGATTGAGTTTGATGATGAGAATGACATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | CATCTGAACAGGAAGCAGCTTTGGAAAGCAGAGCGCTGCTGCACTGGTGTGGTGATGGAAGTCAATCCATaGTCAGAAGAGGTATTTGTA | + |
Preference number: 5 (lower is better) Translates to: HLNRKQLWKAERCCTGVVMEVNP*SEEVFV Trigger: TACAAATACCTCTTCTGACAATGGATTGACTTCCAT...CACCACACCAGTGCAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTTCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | TCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGCTGTACTTCCAACCTGTaGAAACAGTTTACCATGGCA | + |
Preference number: 5 (lower is better) Translates to: SHMVQPAPNTVVQWFLLCCTSNL*KQFTMA Trigger: TGCCATGGTAAACTGTTTCAACAGGTTGGAAGTACA...GCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CAA 90 bp | TCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGCTTTCTGTACGTCTGCTaGTACTTCCAACCTGTTGAA | + |
Preference number: 5 (lower is better) Translates to: SHMVQPAPNTVVQWFLLCFLYVC*YFQPVE Trigger: TTCAACAGGTTGGAAGTACAAGCAGACGTACAGAAA...GCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS TCA 90 bp | ATCCACACTGCTGCTTCCACTGTTGTGTCGGAACTTGAATGGCTTTaGCTCAATATCCACTTGCACTTCCATGCTGTTCCCTTCTCTATG | + |
Preference number: 5 (lower is better) Translates to: IHTAASTVVSELEWL*LNIHLHFHAVPFSM Trigger: CATAGAGAAGGGAACAGCATGGAAGTGCAAGTGGATATTGAGTCAAAGCCATTCAAGTTCCGACACAACAGTGGAAGCAGCAGTGTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | ACGAGGCTCATAAAACCCAGTCTCTCCCAAAGGCACCAAGAATCAAAGGGCACTGTATACTCTCAATACTaGCAATTCCATCCACTCCAC | + |
Preference number: 5 (lower is better) Translates to: TRLIKPSLSQRHQESKGTVYSQY*QFHPLH Trigger: GTGGAGTGGATGGAATTGCAAGTATTGAGAGTATAC...AGTGCCCTTTGATTCTTGGTGCCTTTGGGAGAGACTGGGTTTTATGAGCCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | ACGAGGCTCATAAAACCCAGTCTCTCCCAAAGGCACCAAGAATCAAAGGGCACTCTGTTGTGTCGGAACTaGAATGGCTTTGACTCAATA | + |
Preference number: 5 (lower is better) Translates to: TRLIKPSLSQRHQESKGTLLCRN*NGFDSI Trigger: TATTGAGTCAAAGCCATTCAAGTTCCGACACAACAG...AGTGCCCTTTGATTCTTGGTGCCTTTGGGAGAGACTGGGTTTTATGAGCCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | AAAGAGCTGGCACTAGTGTTCTCTAAGCAGATTAATGGATGCAGCGAGGAAAACGCGCCTCAAACTCACTaGAGTTCGTGCTTTGTTGCT | + |
Preference number: 5 (lower is better) Translates to: KELALVFSKQINGCSEENAPQTH*SSCFVA Trigger: AGCAACAAAGCACGAACTCAAGTGAGTTTGAGGCGC...GTTTTCCTCGCTGCATCCATTAATCTGCTTAGAGAACACTAGTGCCAGCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS TCA 90 bp | ACTCTCAATACTTGCAATTCCATCCACTCCACCATTGAGCTCCCTTaGTTTTCGTTTGCTGTCCTTCTTCCTCCGAAAGAGAGAGCCTAT | + |
Preference number: 5 (lower is better) Translates to: TLNTCNSIHSTIELP*FSFAVLLPPKERAY Trigger: ATAGGCTCTCTCTTTCGGAGGAAGAAGGACAGCAAACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATGGAATTGCAAGTATTGAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS GCA 90 bp | ACTCAATATCCACTTGCACTTCCATGCTGTTCCCTTCTCTATGGCTaGGTTAGTCCCACCGACGTTTATGTCATTCTCATCATCAAACTC | + |
Preference number: 5 (lower is better) Translates to: TQYPLALPCCSLLYG*VSPTDVYVILIIKL Trigger: GAGTTTGATGATGAGAATGACATAAACGTCGGTGGGACTAACGCAGCCATAGAGAAGGGAACAGCATGGAAGTGCAAGTGGATATTGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | TCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTACTCTGCAAATGCTCATCAGAATaGAGTCAGAGTCAATGTTCA | + |
Preference number: 5 (lower is better) Translates to: SHMVQPAPNTVVQWFLLCKCSSE*SQSQCS Trigger: TGAACATTGACTCTGACTCAATTCTGATGAGCATTT...GCAGAGTAAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | TTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTTGAAATCCTTCTCTGTTaGGGTGCCTTTTTGACAGAA | + |
Preference number: 5 (lower is better) Translates to: LTVAHGSTSSQHGCSVVLEILLC*GAFLTE Trigger: TTCTGTCAAAAAGGCACCCAAACAGAGAAGGATTTC...AAGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | TGGTTACCAATGGGCTGCATTAAGCTTGATATCCACATTGCATATGAAGAAATGCTCACTCCTTTCCCATaGCCCGCAGAGACACCACAA | + |
Preference number: 5 (lower is better) Translates to: WLPMGCIKLDIHIAYEEMLTPFP*PAETPQ Trigger: TTGTGGTGTCTCTGCGGGCAATGGGAAAGGAGTGAG...CATTTCTTCATATGCAATGTGGATATCAAGCTTAATGCAGCCCATTGGTAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | GTAATCTGCCACGTTCCATCCCTTAGTGGTTTCAATAAAATGTCACTAACCACTCTGCTGCTTCCACTGTaGTGTCGGAACTTGAATGGC | + |
Preference number: 5 (lower is better) Translates to: VICHVPSLSGFNKMSLTTLLLPL*CRNLNG Trigger: GCCATTCAAGTTCCGACACAACAGTGGAAGCAGCAG...AGTGGTTAGTGACATTTTATTGAAACCACTAAGGGATGGAACGTGGCAGATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | TGGTTACCAATGGGCTGCATTAAGCTTGATATCCACATTGCATATGAAGAAATGCCTCCTGTTGCTTCCTaGGACCACTTGGTAGCACTG | + |
Preference number: 5 (lower is better) Translates to: WLPMGCIKLDIHIAYEEMPPVAS*DHLVAL Trigger: CAGTGCTACCAAGTGGTCCAAGGAAGCAACAGGAGG...CATTTCTTCATATGCAATGTGGATATCAAGCTTAATGCAGCCCATTGGTAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | GTAATCTGCCACGTTCCATCCCTTAGTGGTTTCAATAAAATGTCACTAACCACTCCATCCACTCCACCATaGAGCTCCCTTGATTTTCGT | + |
Preference number: 5 (lower is better) Translates to: VICHVPSLSGFNKMSLTTPSTPP*SSLDFR Trigger: ACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATGG...AGTGGTTAGTGACATTTTATTGAAACCACTAAGGGATGGAACGTGGCAGATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | CTTAACAGTCGCACATGGTTCAACCAGCTCCCAACACGGTTGTTCAGTGGTTCTGATTCCGCTTATGTTTaGAAACATCTTTGCCTTCAT | + |
Preference number: 5 (lower is better) Translates to: LNSRTWFNQLPTRLFSGSDSAYV*KHLCLH Trigger: ATGAAGGCAAAGATGTTTCAAAACATAAGCGGAATC...AGAACCACTGAACAACCGTGTTGGGAGCTGGTTGAACCATGTGCGACTGTTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS TCA 90 bp | CAGAATGTATACTCTCAATACTTGCAATTCCATCCACTCCACCATTaGGCTCCCTTGATTTTCGTTTGCTGTCCTTCTTCCTCCGAAAGA | + |
Preference number: 5 (lower is better) Translates to: QNVYSQYLQFHPLHH*APLIFVCCPSSSER Trigger: TCTTTCGGAGGAAGAAGGACAGCAAACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATGGAATTGCAAGTATTGAGAGTATACATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | TGGTTACCAATGGGCTGCATTAAGCTTGATATCCACATTGCATATGAAGAAATGTCTCCTATGCTAGGGTaGTGCCTTGCTTCTGCTACT | + |
Preference number: 5 (lower is better) Translates to: WLPMGCIKLDIHIAYEEMSPMLG*CLASAT Trigger: AGTAGCAGAAGCAAGGCACAACCCTAGCATAGGAGA...CATTTCTTCATATGCAATGTGGATATCAAGCTTAATGCAGCCCATTGGTAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CAA 90 bp | ATTTCATGTCTGCTGTTCACACACTCATTACTGAACAAAATTGGAATGCAAACAGAACAGGAAGCAGCTTaGGAAAGCAGAGCGCTGCTG | + |
Preference number: 5 (lower is better) Translates to: ISCLLFTHSLLNKIGMQTEQEAA*ESRALL Trigger: CAGCAGCGCTCTGCTTTCCAAAGCTGCTTCCTGTTC...TGTTTGCATTCCAATTTTGTTCAGTAATGAGTGTGTGAACAGCAGACATGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS GCA 90 bp | GATCTCTATCTGAGCCCATTTGCTGATGTAAACTCATGTCTAAAATaGTCATCAGAATTGAGTCAGAGTCAATGTTCATACACAGCCCTT | + |
Preference number: 5 (lower is better) Translates to: DLYLSPFADVNSCLK*SSELSQSQCSYTAL Trigger: AAGGGCTGTGTATGAACATTGACTCTGACTCAATTCTGATGAGCATTTTAGACATGAGTTTACATCAGCAAATGGGCTCAGATAGAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | ATTTCATGTCTGCTGTTCACACACTCATTACTGAACAAAATTGGAATGCAAACACATCACAGGTCTGGTTaGGATGCCAGATCTGTTTAC | + |
Preference number: 5 (lower is better) Translates to: ISCLLFTHSLLNKIGMQTHHRSG*DARSVY Trigger: GTAAACAGATCTGGCATCCAAACCAGACCTGTGATG...TGTTTGCATTCCAATTTTGTTCAGTAATGAGTGTGTGAACAGCAGACATGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS-3UTR CAA 90 bp | GTAATCTGCCACGTTCCATCCCTTAGTGGTTTCAATAAAATGTCACTAACCACTAAATGCTCATCAGAATaGAGTCAGAGTCAATGTTCA | + |
Preference number: 5 (lower is better) Translates to: VICHVPSLSGFNKMSLTTKCSSE*SQSQCS Trigger: TGAACATTGACTCTGACTCAATTCTGATGAGCATTT...AGTGGTTAGTGACATTTTATTGAAACCACTAAGGGATGGAACGTGGCAGATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS-3UTR CAA 90 bp | GAAACAAAGCCACACGTAGACCTTTTATATAAGCTTGGTACAAGCTCTGCATTGATGGAAGTCAATCCATaGTCAGAAGAGGTATTTGTA | + |
Preference number: 5 (lower is better) Translates to: ETKPHVDLLYKLGTSSALMEVNP*SEEVFV Trigger: TACAAATACCTCTTCTGACAATGGATTGACTTCCAT...CAATGCAGAGCTTGTACCAAGCTTATATAAAAGGTCTACGTGTGGCTTTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS CCA 90 bp | TCTATCCTTAGGTATTGTCGTAAGCAATCCACACAAGATCTATGGTaGCATGTCATTATATCAGGAAATCTGTCTTTAGAATGCCGTAAA | + |
Preference number: 5 (lower is better) Translates to: SILRYCRKQSTQDLW*HVIISGNLSLECRK Trigger: TTTACGGCATTCTAAAGACAGATTTCCTGATATAATGACATGCCACCATAGATCTTGTGTGGATTGCTTACGACAATACCTAAGGATAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CCA 90 bp | ATTTCTATCCTTAGGTATTGTCGTAAGCAATCCACACAAGATCTATaGTGGCATGTCATTATATCAGGAAATCTGTCTTTAGAATGCCGT | + |
Preference number: 5 (lower is better) Translates to: ISILRYCRKQSTQDL*WHVIISGNLSLECR Trigger: ACGGCATTCTAAAGACAGATTTCCTGATATAATGACATGCCACCATAGATCTTGTGTGGATTGCTTACGACAATACCTAAGGATAGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CCA 72 bp | TTACCTTCGGGCAAGCCACTGGACGCCCCGCCTGTGTaGCCTCGGGTAGCACCACTGTCATCCACACTGCTG | + |
Preference number: 6 (lower is better) Translates to: LPSGKPLDAPPV*PRVAPLSSTLL Trigger: CAGCAGTGTGGATGACAGTGGTGCTACCCGAGGCCACACAGGCGGGGCGTCCAGTGGCTTGCCCGAAGGTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS TCA 72 bp | CTGCAGCTACCACCGGAGACACGATTACAGACAGGGTaGCACCGCCTGCTATGGCCAGATTCCGCTTATGTT | + |
Preference number: 6 (lower is better) Translates to: LQLPPETRLQTG*HRLLWPDSAYV Trigger: AACATAAGCGGAATCTGGCCATAGCAGGCGGTGTCACCCTGTCTGTAATCGTGTCTCCGGTGGTAGCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS GCA 72 bp | TCTAATGGTGCCTATTCGATCCATGTGGCTTCCACTTaGACTCAAACTGCCAGTCAGGCCGCCGACACTTCC | + |
Preference number: 6 (lower is better) Translates to: SNGAYSIHVAST*TQTASQAADTS Trigger: GGAAGTGTCGGCGGCCTGACTGGCAGTTTGAGTGCAAGTGGAAGCCACATGGATCGAATAGGCACCATTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS GCA 72 bp | TCTCATCATCAAACTCAATCCTCACTCCTTTCCCATTaGCCGCAGAGACACCACAACCCCCACTTCGGCAGA | + |
Preference number: 6 (lower is better) Translates to: SHHQTQSSLLSH*PQRHHNPHFGR Trigger: TCTGCCGAAGTGGGGGTTGTGGTGTCTCTGCGGGCAATGGGAAAGGAGTGAGGATTGAGTTTGATGATGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS GCA 72 bp | AGGCCGCCGACACTTCCCTCTCCTATGCTAGGGTTGTaGCTTGCTTCTGCTACTGATGTTGTATCTATGGCT | + |
Preference number: 6 (lower is better) Translates to: RPPTLPSPMLGL*LASATDVVSMA Trigger: AGCCATAGATACAACATCAGTAGCAGAAGCAAGGCACAACCCTAGCATAGGAGAGGGAAGTGTCGGCGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS CAA 72 bp | GTCAGGCCGCCGACACTTCCCTCTCCTATGCTAGGGTaGTGCCTTGCTTCTGCTACTGATGTTGTATCTATG | + |
Preference number: 6 (lower is better) Translates to: VRPPTLPSPMLG*CLASATDVVSM Trigger: CATAGATACAACATCAGTAGCAGAAGCAAGGCACAACCCTAGCATAGGAGAGGGAAGTGTCGGCGGCCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS CAA 90 bp | AAACTGCCAGTCAGGCCGCCGACACTTCCCTCTCCTATGCTAGGGTaGTGCCTTGCTTCTGCTACTGATGTTGTATCTATGGCTGCGTTA | + |
Preference number: 6 (lower is better) Translates to: KLPVRPPTLPSPMLG*CLASATDVVSMAAL Trigger: TAACGCAGCCATAGATACAACATCAGTAGCAGAAGCAAGGCACAACCCTAGCATAGGAGAGGGAAGTGTCGGCGGCCTGACTGGCAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS CAA 90 bp | TGGCCTCGGGTAGCACCACTGTCATCCACACTGCTGCTTCCACTGTaGTGTCGGAACTTGAATGGCTTTGACTCAATATCCACTTGCACT | + |
Preference number: 6 (lower is better) Translates to: WPRVAPLSSTLLLPL*CRNLNGFDSISTCT Trigger: AGTGCAAGTGGATATTGAGTCAAAGCCATTCAAGTTCCGACACAACAGTGGAAGCAGCAGTGTGGATGACAGTGGTGCTACCCGAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CAA 72 bp | CCAGCTAATGCCATGGTGCTCGCTGTCTCACTCAGGTaGTCTCTAATGGTGCCTATTCGATCCATGTGGCTT | + |
Preference number: 6 (lower is better) Translates to: PANAMVLAVSLR*SLMVPIRSMWL Trigger: AAGCCACATGGATCGAATAGGCACCATTAGAGACAACCTGAGTGAGACAGCGAGCACCATGGCATTAGCTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS CAA 90 bp | ATACTAGCTCCAGCTAATGCCATGGTGCTCGCTGTCTCACTCAGGTaGTCTCTAATGGTGCCTATTCGATCCATGTGGCTTCCACTTGCA | + |
Preference number: 6 (lower is better) Translates to: ILAPANAMVLAVSLR*SLMVPIRSMWLPLA Trigger: TGCAAGTGGAAGCCACATGGATCGAATAGGCACCATTAGAGACAACCTGAGTGAGACAGCGAGCACCATGGCATTAGCTGGAGCTAGTAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS GCA 72 bp | ACAGTCTGGAGCCGGACACCACCTACAGTCAGGATCTaGAACAAGCCACCGTCGAAGCATAAATTCTTCATA | + |
Preference number: 6 (lower is better) Translates to: TVWSRTPPTVRI*NKPPSKHKFFI Trigger: TATGAAGAATTTATGCTTCGACGGTGGCTTGTTGCAGATCCTGACTGTAGGTGGTGTCCGGCTCCAGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS GCA 72 bp | CAGAGGGATGTAGGAGTTGAGAATGGATCCCGCCATTaGTTTGGTGCTGGCGTTATCACTAACTGTTCCCAA | + |
Preference number: 6 (lower is better) Translates to: QRDVGVENGSRH*FGAGVITNCSQ Trigger: TTGGGAACAGTTAGTGATAACGCCAGCACCAAAGCAATGGCGGGATCCATTCTCAACTCCTACATCCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS GCA 72 bp | CCACTTGCACTTCCATGCTGTTCCCTTCTCTATGGCTaGGTTAGTCCCACCGACGTTTATGTCATTCTCATC | + |
Preference number: 6 (lower is better) Translates to: PLALPCCSLLYG*VSPTDVYVILI Trigger: GATGAGAATGACATAAACGTCGGTGGGACTAACGCAGCCATAGAGAAGGGAACAGCATGGAAGTGCAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS CCA 72 bp | CACAGCCTTCTCGCCCACAAGTTAGTTTTGGACAGCTaGCACATCCAAATGCTATCACAGCGTATCCACAGT | + |
Preference number: 6 (lower is better) Translates to: HSLLAHKLVLDS*HIQMLSQRIHS Trigger: ACTGTGGATACGCTGTGATAGCATTTGGATGTGCCAGCTGTCCAAAACTAACTTGTGGGCGAGAAGGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CAA 90 bp | GCACCACTGTCATCCACACTGCTGCTTCCACTGTTGTGTCGGAACTaGAATGGCTTTGACTCAATATCCACTTGCACTTCCATGCTGTTC | + |
Preference number: 6 (lower is better) Translates to: APLSSTLLLPLLCRN*NGFDSISTCTSMLF Trigger: GAACAGCATGGAAGTGCAAGTGGATATTGAGTCAAAGCCATTCAAGTTCCGACACAACAGTGGAAGCAGCAGTGTGGATGACAGTGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS TCA 72 bp | GCTGCTTCCACTGTTGTGTCGGAACTTGAATGGCTTTaGCTCAATATCCACTTGCACTTCCATGCTGTTCCC | + |
Preference number: 6 (lower is better) Translates to: AASTVVSELEWL*LNIHLHFHAVP Trigger: GGGAACAGCATGGAAGTGCAAGTGGATATTGAGTCAAAGCCATTCAAGTTCCGACACAACAGTGGAAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CAA 72 bp | CCATCCACTCCACCATTGAGCTCCCTTGATTTTCGTTaGCTGTCCTTCTTCCTCCGAAAGAGAGAGCCTATT | + |
Preference number: 6 (lower is better) Translates to: PSTPPLSSLDFR*LSFFLRKREPI Trigger: AATAGGCTCTCTCTTTCGGAGGAAGAAGGACAGCAAACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CAA 72 bp | GTAGCACCACTGTCATCCACACTGCTGCTTCCACTGTaGTGTCGGAACTTGAATGGCTTTGACTCAATATCC | + |
Preference number: 6 (lower is better) Translates to: VAPLSSTLLLPL*CRNLNGFDSIS Trigger: GGATATTGAGTCAAAGCCATTCAAGTTCCGACACAACAGTGGAAGCAGCAGTGTGGATGACAGTGGTGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CAA 90 bp | TCCTTCTTCCTCCGAAAGAGAGAGCCTATTGAAATCCTTCTCTGTTaGGGTGCCTTTTTGACAGAAGGCAAGCTCACGGAGGAAGTAGAA | + |
Preference number: 6 (lower is better) Translates to: SFFLRKREPIEILLC*GAFLTEGKLTEEVE Trigger: TTCTACTTCCTCCGTGAGCTTGCCTTCTGTCAAAAAGGCACCCAAACAGAGAAGGATTTCAATAGGCTCTCTCTTTCGGAGGAAGAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS TCA 72 bp | ACTTGCAATTCCATCCACTCCACCATTGAGCTCCCTTaGTTTTCGTTTGCTGTCCTTCTTCCTCCGAAAGAG | + |
Preference number: 6 (lower is better) Translates to: TCNSIHSTIELP*FSFAVLLPPKE Trigger: CTCTTTCGGAGGAAGAAGGACAGCAAACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATGGAATTGCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS TCA 72 bp | GAGAAATTGGGACCACACCATAGACATAAGCTAGCATaGTGGGAACACCAATGCCTACAGTCACTGCAGCTA | + |
Preference number: 6 (lower is better) Translates to: EKLGPHHRHKLA*WEHQCLQSLQL Trigger: TAGCTGCAGTGACTGTAGGCATTGGTGTTCCCATCATGCTAGCTTATGTCTATGGTGTGGTCCCAATTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS TCA 72 bp | CATCCACACTGCTGCTTCCACTGTTGTGTCGGAACTTaGATGGCTTTGACTCAATATCCACTTGCACTTCCA | + |
Preference number: 6 (lower is better) Translates to: HPHCCFHCCVGT*MALTQYPLALP Trigger: TGGAAGTGCAAGTGGATATTGAGTCAAAGCCATTCAAGTTCCGACACAACAGTGGAAGCAGCAGTGTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS GCA 72 bp | TGTCGGAACTTGAATGGCTTTGACTCAATATCCACTTaGACTTCCATGCTGTTCCCTTCTCTATGGCTGCGT | + |
Preference number: 6 (lower is better) Translates to: CRNLNGFDSIST*TSMLFPSLWLR Trigger: ACGCAGCCATAGAGAAGGGAACAGCATGGAAGTGCAAGTGGATATTGAGTCAAAGCCATTCAAGTTCCGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228358.2 |
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CDS CAA 72 bp | GAGCCTATTGAAATCCTTCTCTGTTTGGGTGCCTTTTaGACAGAAGGCAAGCTCACGGAGGAAGTAGAAGAC | + |
Preference number: 6 (lower is better) Translates to: EPIEILLCLGAF*TEGKLTEEVED Trigger: GTCTTCTACTTCCTCCGTGAGCTTGCCTTCTGTCAAAAAGGCACCCAAACAGAGAAGGATTTCAATAGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CAA 72 bp | TCATCCACACTGCTGCTTCCACTGTTGTGTCGGAACTaGAATGGCTTTGACTCAATATCCACTTGCACTTCC | + |
Preference number: 6 (lower is better) Translates to: SSTLLLPLLCRN*NGFDSISTCTS Trigger: GGAAGTGCAAGTGGATATTGAGTCAAAGCCATTCAAGTTCCGACACAACAGTGGAAGCAGCAGTGTGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CAA 90 bp | CTTGCAATTCCATCCACTCCACCATTGAGCTCCCTTGATTTTCGTTaGCTGTCCTTCTTCCTCCGAAAGAGAGAGCCTATTGAAATCCTT | + |
Preference number: 6 (lower is better) Translates to: LAIPSTPPLSSLDFR*LSFFLRKREPIEIL Trigger: AAGGATTTCAATAGGCTCTCTCTTTCGGAGGAAGAAGGACAGCAAACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATGGAATTGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CAA 72 bp | TCCACTGAGACTACACCGTTCTTTCTGTACGTCTGCTaGTACTTCCAACCTGTTGAAACAGTTTACCATGGC | + |
Preference number: 6 (lower is better) Translates to: STETTPFFLYVC*YFQPVETVYHG Trigger: GCCATGGTAAACTGTTTCAACAGGTTGGAAGTACAAGCAGACGTACAGAAAGAACGGTGTAGTCTCAGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022890.10 |
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CDS TCA 72 bp | TTTGCTGTCCTTCTTCCTCCGAAAGAGAGAGCCTATTaGAATCCTTCTCTGTTTGGGTGCCTTTTTGACAGA | + |
Preference number: 6 (lower is better) Translates to: FAVLLPPKERAY*NPSLFGCLFDR Trigger: TCTGTCAAAAAGGCACCCAAACAGAGAAGGATTTCAATAGGCTCTCTCTTTCGGAGGAAGAAGGACAGCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS TCA 72 bp | TACTCTCAATACTTGCAATTCCATCCACTCCACCATTaGGCTCCCTTGATTTTCGTTTGCTGTCCTTCTTCC | + |
Preference number: 6 (lower is better) Translates to: YSQYLQFHPLHH*APLIFVCCPSS Trigger: GGAAGAAGGACAGCAAACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATGGAATTGCAAGTATTGAGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CCA 72 bp | ATAGATGAAGAACGTATAGTTCTTAAGCGTAAACTTTaGGCTCTTTCCTGTCGAGCAGCATCACAGGTCTGG | + |
Preference number: 6 (lower is better) Translates to: IDEERIVLKRKL*ALSCRAASQVW Trigger: CCAGACCTGTGATGCTGCTCGACAGGAAAGAGCCCAAAGTTTACGCTTAAGAACTATACGTTCTTCATCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CAA 90 bp | TCAGAATGTATACTCTCAATACTTGCAATTCCATCCACTCCACCATaGAGCTCCCTTGATTTTCGTTTGCTGTCCTTCTTCCTCCGAAAG | + |
Preference number: 6 (lower is better) Translates to: SECILSILAIPSTPP*SSLDFRLLSFFLRK Trigger: CTTTCGGAGGAAGAAGGACAGCAAACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATGGAATTGCAAGTATTGAGAGTATACATTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CAA 72 bp | ATACTCTCAATACTTGCAATTCCATCCACTCCACCATaGAGCTCCCTTGATTTTCGTTTGCTGTCCTTCTTC | + |
Preference number: 6 (lower is better) Translates to: ILSILAIPSTPP*SSLDFRLLSFF Trigger: GAAGAAGGACAGCAAACGAAAATCAAGGGAGCTCAATGGTGGAGTGGATGGAATTGCAAGTATTGAGAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CCA 72 bp | ATTCATCTTTATTATATAAGCAGCACATCGTGGACATaGCTTTATATCATCAGCTGCTGCTCCAGATTCCTG | + |
Preference number: 6 (lower is better) Translates to: IHLYYISSTSWT*LYIISCCSRFL Trigger: CAGGAATCTGGAGCAGCAGCTGATGATATAAAGCCATGTCCACGATGTGCTGCTTATATAATAAAGATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS GCA 72 bp | CTGAGCCCATTTGCTGATGTAAACTCATGTCTAAAATaGTCATCAGAATTGAGTCAGAGTCAATGTTCATAC | + |
Preference number: 6 (lower is better) Translates to: LSPFADVNSCLK*SSELSQSQCSY Trigger: GTATGAACATTGACTCTGACTCAATTCTGATGAGCATTTTAGACATGAGTTTACATCAGCAAATGGGCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CCA 72 bp | GCGAATGTCATGAGGATTAAACCGTTCAGTGCATTCTaGACAACTGATATTAACTCTACTTTCAGAGATTTC | + |
Preference number: 6 (lower is better) Translates to: ANVMRIKPFSAF*TTDINSTFRDF Trigger: GAAATCTCTGAAAGTAGAGTTAATATCAGTTGTCCAGAATGCACTGAACGGTTTAATCCTCATGACATTCGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS TCA 72 bp | ATTAAGACATCATCACTTAATATCAAGCGAATGTCATaGGGATTAAACCGTTCAGTGCATTCTGGACAACTG | + |
Preference number: 6 (lower is better) Translates to: IKTSSLNIKRMS*GLNRSVHSGQL Trigger: CAGTTGTCCAGAATGCACTGAACGGTTTAATCCTCATGACATTCGCTTGATATTAAGTGATGATGTCTTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CCA 72 bp | AGGTATTGTCGTAAGCAATCCACACAAGATCTATGGTaGCATGTCATTATATCAGGAAATCTGTCTTTAGAA | + |
Preference number: 6 (lower is better) Translates to: RYCRKQSTQDLW*HVIISGNLSLE Trigger: TTCTAAAGACAGATTTCCTGATATAATGACATGCCACCATAGATCTTGTGTGGATTGCTTACGACAATACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |
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CDS CCA 72 bp | CTTAGGTATTGTCGTAAGCAATCCACACAAGATCTATaGTGGCATGTCATTATATCAGGAAATCTGTCTTTA | + |
Preference number: 6 (lower is better) Translates to: LRYCRKQSTQDL*WHVIISGNLSL Trigger: TAAAGACAGATTTCCTGATATAATGACATGCCACCATAGATCTTGTGTGGATTGCTTACGACAATACCTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022890.10 ENSMUST00000228358.2 |