Pregenerated sensors for RNF187 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020496Ensembl transcript IDs: ENSMUST00000094151.6
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTACAGCGAAGTGAAGCACCCGGCGGCCTGGGGATGCCACCCTGCTaGTCTTCTGCAGGGAAGGAGGTCCCTTCCATCAGAGGTGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LQRSEAPGGLGMPPC*SSAGKEVPSIRGGK Trigger: CTTCCCACCTCTGATGGAAGGGACCTCCTTCCCTGCAGAAGAGCAGCAGGGTGGCATCCCCAGGCCGCCGGGTGCTTCACTTCGCTGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CCA 90 bp | ATGCCAGCGACACCCAAAGGGGCACAAGCTGGGAGGAAGAGAGGCTaGGAAGCGAAGCAGAAGGCGGCTCCCAGGACCTGGCACAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: MPATPKGAQAGRKRG*EAKQKAAPRTWHSE Trigger: CTCACTGTGCCAGGTCCTGGGAGCCGCCTTCTGCTTCGCTTCCCAGCCTCTCTTCCTCCCAGCTTGTGCCCCTTTGGGTGTCGCTGGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR GCA 90 bp | AAACTACAGCGAAGTGAAGCACCCGGCGGCCTGGGGATGCCACCCTaGTGCTCTTCTGCAGGGAAGGAGGTCCCTTCCATCAGAGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: KLQRSEAPGGLGMPP*CSSAGKEVPSIRGG Trigger: CCCACCTCTGATGGAAGGGACCTCCTTCCCTGCAGAAGAGCAGCAGGGTGGCATCCCCAGGCCGCCGGGTGCTTCACTTCGCTGTAGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR TCA 90 bp | GGCCAGCGGGGCACCTCTGATGCTTCATCCCAGGCTGTCAAGTGTTaGTGGAGATGGGGATCTGTCCAGGATGAAGGGTGGTGCCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: GQRGTSDASSQAVKC*WRWGSVQDEGWCQA Trigger: TGCCTGGCACCACCCTTCATCCTGGACAGATCCCCATCTCCATCAACACTTGACAGCCTGGGATGAAGCATCAGAGGTGCCCCGCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR GCA 90 bp | GTCCCTTCCATCAGAGGTGGGAAGGAGGAGAAATCACTTTGGGGATaGCAGCGACACCCAAAGGGGCACAAGCTGGGAGGAAGAGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: VPSIRGGKEEKSLWG*QRHPKGHKLGGREA Trigger: AGCCTCTCTTCCTCCCAGCTTGTGCCCCTTTGGGTGTCGCTGGCATCCCCAAAGTGATTTCTCCTCCTTCCCACCTCTGATGGAAGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CCA 90 bp | AAGGAGGTCCCTTCCATCAGAGGTGGGAAGGAGGAGAAATCACTTTaGGGATGCCAGCGACACCCAAAGGGGCACAAGCTGGGAGGAAGA | + |
|
Preference number: 1 (lower is better) Translates to: KEVPSIRGGKEEKSL*GCQRHPKGHKLGGR Trigger: TCTTCCTCCCAGCTTGTGCCCCTTTGGGTGTCGCTGGCATCCCCAAAGTGATTTCTCCTCCTTCCCACCTCTGATGGAAGGGACCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR GCA 90 bp | GAGACCCAAAGTGAGGAAAGAGGTCCTCTGGTGGGTGAGGAATACTaGATTAACACTCAGGTCCCAGCCAAACCCCAGGACCTCCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: ETQSEERGPLVGEEY*INTQVPAKPQDLLH Trigger: ATGCAGGAGGTCCTGGGGTTTGGCTGGGACCTGAGTGTTAATGCAGTATTCCTCACCCACCAGAGGACCTCTTTCCTCACTTTGGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CCA 90 bp | CTTGCTGAGGGATGTCTAGTGAGCCAACCCTGTCACGGGCACCAATaGGAAAGGTGTGAGGCTTGGTTCCTGGATACTAGAACGAATGCC | + |
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Preference number: 1 (lower is better) Translates to: LAEGCLVSQPCHGHQ*ERCEAWFLDTRTNA Trigger: GGCATTCGTTCTAGTATCCAGGAACCAAGCCTCACACCTTTCCCATTGGTGCCCGTGACAGGGTTGGCTCACTAGACATCCCTCAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR TCA 90 bp | TGTGAGGCTTGGTTCCTGGATACTAGAACGAATGCCACACTAAGCTaGGCCATGGCAAAACAAGAAGCAGGGGCTTCCGAGCTGCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: CEAWFLDTRTNATLS*AMAKQEAGASELPS Trigger: ACTTGGCAGCTCGGAAGCCCCTGCTTCTTGTTTTGCCATGGCTCAGCTTAGTGTGGCATTCGTTCTAGTATCCAGGAACCAAGCCTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CCA 90 bp | TTGGCCCCTGACCTGTGTCTGTCCACTCTGCCGGGTTTTGTTTCTTaGACTAGTTATCTACACACACGATGCTGCAGGCAACCACACTAC | + |
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Preference number: 1 (lower is better) Translates to: LAPDLCLSTLPGFVS*TSYLHTRCCRQPHY Trigger: GTAGTGTGGTTGCCTGCAGCATCGTGTGTGTAGATAACTAGTCCAAGAAACAAAACCCGGCAGAGTGGACAGACACAGGTCAGGGGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR-3UTR TCA 90 bp | TCCGAGCTGCCAAGTGGTCCCAGGCAGGGCTGGCACACACTGGGAAAGGAATCCGGGATCTGTCCAGGATaGAGGGTGGTGCCAGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SELPSGPRQGWHTLGKESGICPG*RVVPGR Trigger: TCTGCCTGGCACCACCCTTCATCCTGGACAGATCCC...GGATTCCTTTCCCAGTGTGTGCCAGCCCTGCCTGGGACCACTTGGCAGCTCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGCTCTTCTGCAGGGAAGGAGGTCCCTTCCATCAGAGGTGGGAAGGAGGACAGGGGCTTCCGAGCTaGCAAGTGGTCCCAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LLLFCREGGPFHQRWEGGQGLPS*QVVPGR Trigger: CCTGCCTGGGACCACTTGGCAGCTCGGAAGCCCCTG...TCCTCCTTCCCACCTCTGATGGAAGGGACCTCCTTCCCTGCAGAAGAGCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR-3UTR CCA 90 bp | CACTCAGGTCCCAGCCAAACCCCAGGACCTCCTGCATCCCTATTCTCTGGCACTGGTCCCAGGCAGGGCTaGCACACACTGGGAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HSGPSQTPGPPASLFSGTGPRQG*HTLGKE Trigger: TTCCTTTCCCAGTGTGTGCCAGCCCTGCCTGGGACC...AGTGCCAGAGAATAGGGATGCAGGAGGTCCTGGGGTTTGGCTGGGACCTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGTGGGAAGGAGGAGAAATCACTTTGGGGATGCCAGCGACACCCAAAGGGGGGAGGAAGAGAGGCTaGGAAGCGAAGCAGAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: QRWEGGEITLGMPATPKGGRKRG*EAKQKA Trigger: CGCCTTCTGCTTCGCTTCCCAGCCTCTCTTCCTCCC...CCCTTTGGGTGTCGCTGGCATCCCCAAAGTGATTTCTCCTCCTTCCCACCTCTG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CAA 90 bp | GAAGGAGGTCCCTTCCATCAGAGGTGGGAAGGAGGAGAAATCACTTaGGGGATGCCAGCGACACCCAAAGGGGCACAAGCTGGGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: EGGPFHQRWEGGEIT*GMPATPKGAQAGRK Trigger: CTTCCTCCCAGCTTGTGCCCCTTTGGGTGTCGCTGGCATCCCCAAAGTGATTTCTCCTCCTTCCCACCTCTGATGGAAGGGACCTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR-3UTR CCA 90 bp | GCCATGGCAAAACAAGAAGCAGGGGCTTCCGAGCTGCCAAGTGGTCCCAGGCAGAACACTGCTGAACAATaGAACTATGTGCATGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: AMAKQEAGASELPSGPRQNTAEQ*NYVHGQ Trigger: CTGGCCATGCACATAGTTCCATTGTTCAGCAGTGTT...CTGCCTGGGACCACTTGGCAGCTCGGAAGCCCCTGCTTCTTGTTTTGCCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CAA 90 bp | CTATGTCTTTGGCCCCTGACCTGTGTCTGTCCACTCTGCCGGGTTTaGTTTCTTGGACTAGTTATCTACACACACGATGCTGCAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: LCLWPLTCVCPLCRV*FLGLVIYTHDAAGN Trigger: GTTGCCTGCAGCATCGTGTGTGTAGATAACTAGTCCAAGAAACAAAACCCGGCAGAGTGGACAGACACAGGTCAGGGGCCAAAGACATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR-3UTR TCA 90 bp | CAAACCACTTTATTCAGCACTGAAAACCCAGCCCACCTGCGAGTCAAGTTGAGGCAGGCTGTCAAGTGTTaGTGGAGATGGGGATCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: QTTLFSTENPAHLRVKLRQAVKC*WRWGSV Trigger: GACAGATCCCCATCTCCATCAACACTTGACAGCCTG...CCTCAACTTGACTCGCAGGTGGGCTGGGTTTTCAGTGCTGAATAAAGTGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR-3UTR TCA 90 bp | GGATGCCACCCTGCTGCTCTTCTGCAGGGAAGGAGGTCCCTTCCATCAGAGGTGAATGAAAAACACTGCTaGACAATGGAACTATGTGCA | + |
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Preference number: 2 (lower is better) Translates to: GCHPAALLQGRRSLPSEVNEKHC*TMELCA Trigger: TGCACATAGTTCCATTGTTCAGCAGTGTTTTTCATT...CACCTCTGATGGAAGGGACCTCCTTCCCTGCAGAAGAGCAGCAGGGTGGCATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CAA 90 bp | CTGGCACACACTGGGAAAGGAATCCCAGGACTGGTAGGTCTCTATTaGGAACAGGTACAAGCCCGAGCACATTCATGCCCCAAAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: LAHTGKGIPGLVGLY*EQVQARAHSCPKEN Trigger: ATTTTCTTTGGGGCATGAATGTGCTCGGGCTTGTACCTGTTCCAAATAGAGACCTACCAGTCCTGGGATTCCTTTCCCAGTGTGTGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR-3UTR GCA 90 bp | GGACAGAACATTGTTACCCGAAACCTAAATACATCTATGTCTTTGGCCCCTGACAACCCCAGGACCTCCTaGATCCCTATTCTCTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: GQNIVTRNLNTSMSLAPDNPRTS*IPILWH Trigger: GTGCCAGAGAATAGGGATGCAGGAGGTCCTGGGGTT...GTCAGGGGCCAAAGACATAGATGTATTTAGGTTTCGGGTAACAATGTTCTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR GCA 72 bp | ACCCGGCGGCCTGGGGATGCCACCCTGCTGCTCTTCTaGAGGGAAGGAGGTCCCTTCCATCAGAGGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: TRRPGDATLLLF*REGGPFHQRWE Trigger: TTCCCACCTCTGATGGAAGGGACCTCCTTCCCTGCAGAAGAGCAGCAGGGTGGCATCCCCAGGCCGCCGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR GCA 72 bp | CGAAGTGAAGCACCCGGCGGCCTGGGGATGCCACCCTaGTGCTCTTCTGCAGGGAAGGAGGTCCCTTCCATC | + |
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Preference number: 3 (lower is better) Translates to: RSEAPGGLGMPP*CSSAGKEVPSI Trigger: GATGGAAGGGACCTCCTTCCCTGCAGAAGAGCAGCAGGGTGGCATCCCCAGGCCGCCGGGTGCTTCACTTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR GCA 72 bp | AACTACAGCGAAGTGAAGCACCCGGCGGCCTGGGGATaGCACCCTGCTGCTCTTCTGCAGGGAAGGAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: NYSEVKHPAAWG*HPAALLQGRRS Trigger: GGACCTCCTTCCCTGCAGAAGAGCAGCAGGGTGGCATCCCCAGGCCGCCGGGTGCTTCACTTCGCTGTAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR GCA 72 bp | GAGCCATGGCAAAACAAGAAGCAGGGGCTTCCGAGCTaGCAAGTGGTCCCAGGCAGGGCTGGCACACACTGG | + |
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Preference number: 3 (lower is better) Translates to: EPWQNKKQGLPS*QVVPGRAGTHW Trigger: CCAGTGTGTGCCAGCCCTGCCTGGGACCACTTGGCAGCTCGGAAGCCCCTGCTTCTTGTTTTGCCATGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CCA 72 bp | GGCTGGGAAGCGAAGCAGAAGGCGGCTCCCAGGACCTaGCACAGTGAGACCCAAAGTGAGGAAAGAGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: GWEAKQKAAPRT*HSETQSEERGP Trigger: AGGACCTCTTTCCTCACTTTGGGTCTCACTGTGCCAGGTCCTGGGAGCCGCCTTCTGCTTCGCTTCCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR TCA 72 bp | TCAGCACTGAAAACCCAGCCCACCTGCGAGTCAAGTTaGGGCCGGTCACTACATCCAAGGCTGGGGCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: SALKTQPTCESS*GRSLHPRLGPS Trigger: AGAAGGCCCCAGCCTTGGATGTAGTGACCGGCCTCAACTTGACTCGCAGGTGGGCTGGGTTTTCAGTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR-3UTR CAA 90 bp | CACTCAGGTCCCAGCCAAACCCCAGGACCTCCTGCATCCCTATTCTCTGGCACTCCAGGCTGTCAAGTGTaGATGGAGATGGGGATCTGT | + |
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Preference number: 3 (lower is better) Translates to: HSGPSQTPGPPASLFSGTPGCQV*MEMGIC Trigger: ACAGATCCCCATCTCCATCAACACTTGACAGCCTGG...AGTGCCAGAGAATAGGGATGCAGGAGGTCCTGGGGTTTGGCTGGGACCTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR GCA 72 bp | ATCAGAGGTGGGAAGGAGGAGAAATCACTTTGGGGATaGCAGCGACACCCAAAGGGGCACAAGCTGGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: IRGGKEEKSLWG*QRHPKGHKLGG Trigger: TCCTCCCAGCTTGTGCCCCTTTGGGTGTCGCTGGCATCCCCAAAGTGATTTCTCCTCCTTCCCACCTCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CCA 72 bp | AGCTGCCAAGTGGTCCCAGGCAGGGCTGGCACACACTaGGAAAGGAATCCCAGGACTGGTAGGTCTCTATTT | + |
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Preference number: 3 (lower is better) Translates to: SCQVVPGRAGTH*ERNPRTGRSLF Trigger: AAATAGAGACCTACCAGTCCTGGGATTCCTTTCCCAGTGTGTGCCAGCCCTGCCTGGGACCACTTGGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR-3UTR CAA 90 bp | CTGCTGCTCTTCTGCAGGGAAGGAGGTCCCTTCCATCAGAGGTGGGAAGGAGGACTGGTAGGTCTCTATTaGGAACAGGTACAAGCCCGA | + |
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Preference number: 3 (lower is better) Translates to: LLLFCREGGPFHQRWEGGLVGLY*EQVQAR Trigger: TCGGGCTTGTACCTGTTCCAAATAGAGACCTACCAG...TCCTCCTTCCCACCTCTGATGGAAGGGACCTCCTTCCCTGCAGAAGAGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR TCA 72 bp | GGCACCTCTGATGCTTCATCCCAGGCTGTCAAGTGTTaGTGGAGATGGGGATCTGTCCAGGATGAAGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: GTSDASSQAVKC*WRWGSVQDEGW Trigger: CCACCCTTCATCCTGGACAGATCCCCATCTCCATCAACACTTGACAGCCTGGGATGAAGCATCAGAGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR TCA 72 bp | ACAATGGAACTATGTGCATGGCCAGCGGGGCACCTCTaGTGCTTCATCCCAGGCTGTCAAGTGTTGATGGAG | + |
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Preference number: 3 (lower is better) Translates to: TMELCAWPAGHL*CFIPGCQVLME Trigger: CTCCATCAACACTTGACAGCCTGGGATGAAGCATCAGAGGTGCCCCGCTGGCCATGCACATAGTTCCATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CCA 72 bp | CCCTGTCACGGGCACCAATGGGAAAGGTGTGAGGCTTaGTTCCTGGATACTAGAACGAATGCCACACTAAGC | + |
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Preference number: 3 (lower is better) Translates to: PCHGHQWERCEA*FLDTRTNATLS Trigger: GCTTAGTGTGGCATTCGTTCTAGTATCCAGGAACCAAGCCTCACACCTTTCCCATTGGTGCCCGTGACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CCA 72 bp | GGATGTCTAGTGAGCCAACCCTGTCACGGGCACCAATaGGAAAGGTGTGAGGCTTGGTTCCTGGATACTAGA | + |
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Preference number: 3 (lower is better) Translates to: GCLVSQPCHGHQ*ERCEAWFLDTR Trigger: TCTAGTATCCAGGAACCAAGCCTCACACCTTTCCCATTGGTGCCCGTGACAGGGTTGGCTCACTAGACATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR TCA 72 bp | TGGTTCCTGGATACTAGAACGAATGCCACACTAAGCTaGGCCATGGCAAAACAAGAAGCAGGGGCTTCCGAG | + |
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Preference number: 3 (lower is better) Translates to: WFLDTRTNATLS*AMAKQEAGASE Trigger: CTCGGAAGCCCCTGCTTCTTGTTTTGCCATGGCTCAGCTTAGTGTGGCATTCGTTCTAGTATCCAGGAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CCA 72 bp | ACAGTGAGACCCAAAGTGAGGAAAGAGGTCCTCTGGTaGGTGAGGAATACTGCATTAACACTCAGGTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: TVRPKVRKEVLW*VRNTALTLRSQ Trigger: CTGGGACCTGAGTGTTAATGCAGTATTCCTCACCCACCAGAGGACCTCTTTCCTCACTTTGGGTCTCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CCA 72 bp | GACCTGTGTCTGTCCACTCTGCCGGGTTTTGTTTCTTaGACTAGTTATCTACACACACGATGCTGCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: DLCLSTLPGFVS*TSYLHTRCCRQ Trigger: TTGCCTGCAGCATCGTGTGTGTAGATAACTAGTCCAAGAAACAAAACCCGGCAGAGTGGACAGACACAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR GCA 72 bp | CTATGTCTTTGGCCCCTGACCTGTGTCTGTCCACTCTaGCGGGTTTTGTTTCTTGGACTAGTTATCTACACA | + |
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Preference number: 3 (lower is better) Translates to: LCLWPLTCVCPL*RVLFLGLVIYT Trigger: TGTGTAGATAACTAGTCCAAGAAACAAAACCCGGCAGAGTGGACAGACACAGGTCAGGGGCCAAAGACATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR TCA 90 bp | AGGCCAGCTGTAGAAGGTGGTTCCTTCTGCCTCGTGCTCCAGGGGGCCAGCCTGGCCGCTGATTCTGCCTaGCCATGCAGGTCCCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RPAVEGGSFCLVLQGASLAADSA*PCRSRA Trigger: TGCCCGGGACCTGCATGGTCAGGCAGAATCAGCGGC...CAGGCTGGCCCCCTGGAGCACGAGGCAGAAGGAACCACCTTCTACAGCTGGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR TCA 90 bp | CAGAGGTGGGAAGGAGGAGAAATCACTTTGGGGATGCCAGCGACACCCAAAGGGTCGCGGGGCGCGCGCTaGCACAGGGCGCAGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: QRWEGGEITLGMPATPKGSRGAR*HRAQMA Trigger: TGCCATCTGCGCCCTGTGTCAGCGCGCGCCCCGCGA...CCCTTTGGGTGTCGCTGGCATCCCCAAAGTGATTTCTCCTCCTTCCCACCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR TCA 90 bp | TGCTGCAGGCCAGCTGTAGAAGGTGGTTCCTTCTGCCTCGTGCTCCAGGGGGCCACTGCAGAAGCATGCTaGGGCCCAGGTTGCGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: CCRPAVEGGSFCLVLQGATAEAC*GPGCGA Trigger: AGCACCGCAACCTGGGCCTCAGCATGCTTCTGCAGT...GGCCCCCTGGAGCACGAGGCAGAAGGAACCACCTTCTACAGCTGGCCTGCAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR GCA 90 bp | TGTCACGGGCACCAATGGGAAAGGTGTGAGGCTTGGTTCCTGGATACTAGAACGGCGCGACAGAGCAGCTaGAGCGCGGCCTCGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: CHGHQWERCEAWFLDTRTARQSS*SAASLA Trigger: TGCCAGCGAGGCCGCGCTGCAGCTGCTCTGTCGCGC...CGTTCTAGTATCCAGGAACCAAGCCTCACACCTTTCCCATTGGTGCCCGTGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR GCA 90 bp | GCCATGGCAAAACAAGAAGCAGGGGCTTCCGAGCTGCCAAGTGGTCCCAGGCAGAGCTCTGACACAGCCTaGAGCAGGGACCGGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: AMAKQEAGASELPSGPRQSSDTA*SRDRKR Trigger: TCGCTTCCGGTCCCTGCTGCAGGCTGTGTCAGAGCT...CTGCCTGGGACCACTTGGCAGCTCGGAAGCCCCTGCTTCTTGTTTTGCCATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR TCA 90 bp | CACTCAGGTCCCAGCCAAACCCCAGGACCTCCTGCATCCCTATTCTCTGGCACTCCACACAGCAGCCGCTaGTTCTGCCTGACCATGCAG | + |
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Preference number: 4 (lower is better) Translates to: HSGPSQTPGPPASLFSGTPHSSR*FCLTMQ Trigger: CTGCATGGTCAGGCAGAATCAGCGGCTGCTGTGTGG...AGTGCCAGAGAATAGGGATGCAGGAGGTCCTGGGGTTTGGCTGGGACCTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR TCA 90 bp | GGATGCCACCCTGCTGCTCTTCTGCAGGGAAGGAGGTCCCTTCCATCAGAGGTGCTTCTTCTCCAGCTCTaGCACAGCCTGCAGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GCHPAALLQGRRSLPSEVLLLQL*HSLQQG Trigger: TCCCTGCTGCAGGCTGTGTCAGAGCTGGAGAAGAAG...CACCTCTGATGGAAGGGACCTCCTTCCCTGCAGAAGAGCAGCAGGGTGGCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR GCA 90 bp | AGAAGGCGGCTCCCAGGACCTGGCACAGTGAGACCCAAAGTGAGGAAAGAGGTCAGGCCCAGGTTGCGGTaGTTCTTCTCCAGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: RRRLPGPGTVRPKVRKEVRPRLR*FFSSSD Trigger: GTCAGAGCTGGAGAAGAAGCACCGCAACCTGGGCCT...GACCTCTTTCCTCACTTTGGGTCTCACTGTGCCAGGTCCTGGGAGCCGCCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR CCA 90 bp | TTGTTTCTTGGACTAGTTATCTACACACACGATGCTGCAGGCAACCACACTACCGCCCGGCAGAAACGGTaGCCGCAGTCGGCGCGCACC | + |
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Preference number: 4 (lower is better) Translates to: LFLGLVIYTHDAAGNHTTARQKR*PQSART Trigger: GGTGCGCGCCGACTGCGGCCACCGTTTCTGCCGGGC...GGTAGTGTGGTTGCCTGCAGCATCGTGTGTGTAGATAACTAGTCCAAGAAACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CAA 72 bp | TTCAGCACTGAAAACCCAGCCCACCTGCGAGTCAAGTaGAGGCCGGTCACTACATCCAAGGCTGGGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: FSTENPAHLRVK*RPVTTSKAGAF Trigger: GAAGGCCCCAGCCTTGGATGTAGTGACCGGCCTCAACTTGACTCGCAGGTGGGCTGGGTTTTCAGTGCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR TCA 90 bp | AGGCCAGCTGTAGAAGGTGGTTCCTTCTGCCTCGTGCTCCAGGGGGCCAGCCTGTTAAGTCCTTCCTCATaGTTTCCACAGAGCCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RPAVEGGSFCLVLQGASLLSPSS*FPQSPC Trigger: ACAAGGGCTCTGTGGAAATCATGAGGAAGGACTTAA...CAGGCTGGCCCCCTGGAGCACGAGGCAGAAGGAACCACCTTCTACAGCTGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR GCA 90 bp | CACTCAGGTCCCAGCCAAACCCCAGGACCTCCTGCATCCCTATTCTCTGGCACTTCCTTCTCAGCCTCTTaGAGAAAGTGTTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HSGPSQTPGPPASLFSGTSFSAS*RKCSSS Trigger: GGAGGAGGAACACTTTCTGCAAGAGGCTGAGAAGGA...AGTGCCAGAGAATAGGGATGCAGGAGGTCCTGGGGTTTGGCTGGGACCTGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CAA 72 bp | ACTGGGAAAGGAATCCCAGGACTGGTAGGTCTCTATTaGGAACAGGTACAAGCCCGAGCACATTCATGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TGKGIPGLVGLY*EQVQARAHSCP Trigger: GGGGCATGAATGTGCTCGGGCTTGTACCTGTTCCAAATAGAGACCTACCAGTCCTGGGATTCCTTTCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CAA 72 bp | TGGCCCCTGACCTGTGTCTGTCCACTCTGCCGGGTTTaGTTTCTTGGACTAGTTATCTACACACACGATGCT | + |
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Preference number: 4 (lower is better) Translates to: WPLTCVCPLCRV*FLGLVIYTHDA Trigger: AGCATCGTGTGTGTAGATAACTAGTCCAAGAAACAAAACCCGGCAGAGTGGACAGACACAGGTCAGGGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| 3UTR CAA 72 bp | AACATTGTTACCCGAAACCTAAATACATCTATGTCTTaGGCCCCTGACCTGTGTCTGTCCACTCTGCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: NIVTRNLNTSMS*APDLCLSTLPG Trigger: ACCCGGCAGAGTGGACAGACACAGGTCAGGGGCCAAAGACATAGATGTATTTAGGTTTCGGGTAACAATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS TCA 90 bp | AAACGGTGGCCGCAGTCGGCGCGCACCGGTTCGCGGGGCGCGCGCTaGCACAGGGCGCAGATGGCATCAGCTGGGCCCGCGGGGAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: KRWPQSARTGSRGAR*HRAQMASAGPAGSA Trigger: GGCGCTCCCCGCGGGCCCAGCTGATGCCATCTGCGCCCTGTGTCAGCGCGCGCCCCGCGAACCGGTGCGCGCCGACTGCGGCCACCGTTT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS GCA 90 bp | CTGAGGCCCAGGTTGCGGTGCTTCTTCTCCAGCTCTGACACAGCCTaGAGCAGGGACCGGAAGCGATCTGCCGGGTCGGCCAGCTCATCA | + |
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Preference number: 5 (lower is better) Translates to: LRPRLRCFFSSSDTA*SRDRKRSAGSASSS Trigger: TGATGAGCTGGCCGACCCGGCAGATCGCTTCCGGTCCCTGCTGCAGGCTGTGTCAGAGCTGGAGAAGAAGCACCGCAACCTGGGCCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR CAA 90 bp | CACTCAGGTCCCAGCCAAACCCCAGGACCTCCTGCATCCCTATTCTCTGGCACTATTTCCACAGAGCCCTaGTTCTCCTTGCCGCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: HSGPSQTPGPPASLFSGTISTEP*FSLPRR Trigger: CCTGCGCGGCAAGGAGAACAAGGGCTCTGTGGAAAT...AGTGCCAGAGAATAGGGATGCAGGAGGTCCTGGGGTTTGGCTGGGACCTGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS TCA 90 bp | CTGCCTGACCATGCAGGTCCCGGGCATCATTTAAGTCCTTCCTCATaGTTTCCACAGAGCCCTTGTTCTCCTTGCCGCGCAGGGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LPDHAGPGHHLSPSS*FPQSPCSPCRAGPS Trigger: GGAAGGCCCTGCGCGGCAAGGAGAACAAGGGCTCTGTGGAAATCATGAGGAAGGACTTAAATGATGCCCGGGACCTGCATGGTCAGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS GCA 90 bp | GCCAGCTCATCATCCTCGGAAGCACCCTCATCCTTCTCAGCCTCTTaGAGAAAGTGTTCCTCCTCCTCCACGAAGAAGGCCCGAAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ASSSSSEAPSSFSAS*RKCSSSSTKKARSF Trigger: GAAGCTTCGGGCCTTCTTCGTGGAGGAGGAGGAACACTTTCTGCAAGAGGCTGAGAAGGATGAGGGTGCTTCCGAGGATGATGAGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR CAA 90 bp | CTGCTGAACAATGGAACTATGTGCATGGCCAGCGGGGCACCTCTGATGCTTCATATGCTGAGGCCCAGGTaGCGGTGCTTCTTCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LLNNGTMCMASGAPLMLHMLRPR*RCFFSS Trigger: GCTGGAGAAGAAGCACCGCAACCTGGGCCTCAGCAT...ATGAAGCATCAGAGGTGCCCCGCTGGCCATGCACATAGTTCCATTGTTCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS TCA 90 bp | CGGTCCATAACATGCCCCTTCCACACAGCAGCCGCTGATTCTGCCTaGCCATGCAGGTCCCGGGCATCATTTAAGTCCTTCCTCATGATT | + |
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Preference number: 5 (lower is better) Translates to: RSITCPFHTAAADSA*PCRSRASFKSFLMI Trigger: AATCATGAGGAAGGACTTAAATGATGCCCGGGACCTGCATGGTCAGGCAGAATCAGCGGCTGCTGTGTGGAAGGGGCATGTTATGGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS-3UTR CAA 90 bp | CTGCTGAACAATGGAACTATGTGCATGGCCAGCGGGGCACCTCTGATGCTTCATATCCTTCTCAGCCTCTaGCAGAAAGTGTTCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LLNNGTMCMASGAPLMLHILLSL*QKVFLL Trigger: GAGGAGGAACACTTTCTGCAAGAGGCTGAGAAGGAT...ATGAAGCATCAGAGGTGCCCCGCTGGCCATGCACATAGTTCCATTGTTCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS TCA 72 bp | CCGCAGTCGGCGCGCACCGGTTCGCGGGGCGCGCGCTaGCACAGGGCGCAGATGGCATCAGCTGGGCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: PQSARTGSRGAR*HRAQMASAGPA Trigger: CGCGGGCCCAGCTGATGCCATCTGCGCCCTGTGTCAGCGCGCGCCCCGCGAACCGGTGCGCGCCGACTGCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS GCA 72 bp | CGGCTGAGCGGAGGGCGGCTGGGCTCTACGGCGCGCTaGCAGCAGTCATCGGCACACTCCGGGCACGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RLSGGRLGSTAR*QQSSAHSGHGK Trigger: CTTCCCGTGCCCGGAGTGTGCCGATGACTGCTGGCAGCGCGCCGTAGAGCCCAGCCGCCCTCCGCTCAGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS GCA 72 bp | AGGTTGCGGTGCTTCTTCTCCAGCTCTGACACAGCCTaGAGCAGGGACCGGAAGCGATCTGCCGGGTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: RLRCFFSSSDTA*SRDRKRSAGSA Trigger: GGCCGACCCGGCAGATCGCTTCCGGTCCCTGCTGCAGGCTGTGTCAGAGCTGGAGAAGAAGCACCGCAACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS TCA 72 bp | TCGGTCCATAACATGCCCCTTCCACACAGCAGCCGCTaGTTCTGCCTGACCATGCAGGTCCCGGGCATCATT | + |
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Preference number: 6 (lower is better) Translates to: SVHNMPLPHSSR*FCLTMQVPGII Trigger: AATGATGCCCGGGACCTGCATGGTCAGGCAGAATCAGCGGCTGCTGTGTGGAAGGGGCATGTTATGGACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS CAA 90 bp | GGCCAGCTCATCATCCTCGGAAGCACCCTCATCCTTCTCAGCCTCTaGCAGAAAGTGTTCCTCCTCCTCCACGAAGAAGGCCCGAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GQLIILGSTLILLSL*QKVFLLLHEEGPKL Trigger: AAGCTTCGGGCCTTCTTCGTGGAGGAGGAGGAACACTTTCTGCAAGAGGCTGAGAAGGATGAGGGTGCTTCCGAGGATGATGAGCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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| CDS TCA 72 bp | ACATGCCCCTTCCACACAGCAGCCGCTGATTCTGCCTaGCCATGCAGGTCCCGGGCATCATTTAAGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TCPFHTAAADSA*PCRSRASFKSF Trigger: GAAGGACTTAAATGATGCCCGGGACCTGCATGGTCAGGCAGAATCAGCGGCTGCTGTGTGGAAGGGGCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094151.6 |
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