Pregenerated sensors for RNF185 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020448Ensembl transcript IDs: ENSMUST00000064364.3, ENSMUST00000077078.12
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCTTTGCTGAGGAAGCGGGAGGTGGGAGGAGCAGTACTGGGATGTaGAAGGGAGTCTCTCAGGATAGGGAGTGGAGGCCACTTACCAAG | + |
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Preference number: 1 (lower is better) Translates to: VFAEEAGGGRSSTGM*KGVSQDREWRPLTK Trigger: CTTGGTAAGTGGCCTCCACTCCCTATCCTGAGAGACTCCCTTCCACATCCCAGTACTGCTCCTCCCACCTCCCGCTTCCTCAGCAAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR GCA 90 bp | GTTAATGTTCACAGGGGCACATGCCACCACAGCTGTGCTACTGCATaGCCTGCGATGACTCTGCTGCTGCACACCTGGGTCATCCATTTC | + |
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Preference number: 1 (lower is better) Translates to: VNVHRGTCHHSCATA*PAMTLLLHTWVIHF Trigger: GAAATGGATGACCCAGGTGTGCAGCAGCAGAGTCATCGCAGGGCATGCAGTAGCACAGCTGTGGTGGCATGTGCCCCTGTGAACATTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR TCA 90 bp | CTTTCTCCCAGTTTGTTATTGCTGGGGCAGTGGGTGTTGGAGAAGTaGACAAAAGGGTCCAGTAGACGCTTATCTTGCTGCCCTGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: LSPSLLLLGQWVLEK*TKGSSRRLSCCPAE Trigger: CTCAGCAGGGCAGCAAGATAAGCGTCTACTGGACCCTTTTGTTCACTTCTCCAACACCCACTGCCCCAGCAATAACAAACTGGGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR CCA 90 bp | AGGCAAGGCTTTCTCCCAGTTTGTTATTGCTGGGGCAGTGGGTGTTaGAGAAGTGAACAAAAGGGTCCAGTAGACGCTTATCTTGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: RQGFLPVCYCWGSGC*RSEQKGPVDAYLAA Trigger: GGCAGCAAGATAAGCGTCTACTGGACCCTTTTGTTCACTTCTCCAACACCCACTGCCCCAGCAATAACAAACTGGGAGAAAGCCTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR CCA 90 bp | AGCTGTGCTACTGCATGCCCTGCGATGACTCTGCTGCTGCACACCTaGGTCATCCATTTCACCAGATTCCAAATGGTTTACTCCACTACT | + |
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Preference number: 1 (lower is better) Translates to: SCATACPAMTLLLHT*VIHFTRFQMVYSTT Trigger: AGTAGTGGAGTAAACCATTTGGAATCTGGTGAAATGGATGACCCAGGTGTGCAGCAGCAGAGTCATCGCAGGGCATGCAGTAGCACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR TCA 90 bp | TCTAAGATGAGGCCTGATGGGCAGAGCAAGAACCGTCTCAGCAGGTaGCTATTCTCCTGCCTGTCAACACAATCCCACAATCAGATTCAG | + |
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Preference number: 1 (lower is better) Translates to: SKMRPDGQSKNRLSR*LFSCLSTQSHNQIQ Trigger: CTGAATCTGATTGTGGGATTGTGTTGACAGGCAGGAGAATAGTCACCTGCTGAGACGGTTCTTGCTCTGCCCATCAGGCCTCATCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR CCA 90 bp | GGTTTTGAGTTCCAACTCCTTGGTGTGTCTCTGACCCTTGATCCCTaGGTCAGGATTAAACAAATCAAACACAGGAGTGGGTGCGGCATA | + |
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Preference number: 1 (lower is better) Translates to: GFEFQLLGVSLTLDP*VRIKQIKHRSGCGI Trigger: TATGCCGCACCCACTCCTGTGTTTGATTTGTTTAATCCTGACCCAGGGATCAAGGGTCAGAGACACACCAAGGAGTTGGAACTCAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR CCA 90 bp | TCTAGAAAAATCACCAGGCAAGGCTTTCTCCCAGTTTGTTATTGCTaGGGCAGTGGGTGTTGGAGAAGTGAACAAAAGGGTCCAGTAGAC | + |
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Preference number: 1 (lower is better) Translates to: SRKITRQGFLPVCYC*GSGCWRSEQKGPVD Trigger: GTCTACTGGACCCTTTTGTTCACTTCTCCAACACCCACTGCCCCAGCAATAACAAACTGGGAGAAAGCCTTGCCTGGTGATTTTTCTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR CCA 90 bp | CTCTGCTGCTGCACACCTGGGTCATCCATTTCACCAGATTCCAAATaGTTTACTCCACTACTCACAATCCCTCTCTCATCTCCTTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LCCCTPGSSISPDSK*FTPLLTIPLSSPLC Trigger: ACACAAAGGAGATGAGAGAGGGATTGTGAGTAGTGGAGTAAACCATTTGGAATCTGGTGAAATGGATGACCCAGGTGTGCAGCAGCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR TCA 90 bp | TTGGGGGTTCCTTTGGTTTTGAGTTCCAACTCCTTGGTGTGTCTCTaGCCCTTGATCCCTGGGTCAGGATTAAACAAATCAAACACAGGA | + |
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Preference number: 1 (lower is better) Translates to: LGVPLVLSSNSLVCL*PLIPGSGLNKSNTG Trigger: TCCTGTGTTTGATTTGTTTAATCCTGACCCAGGGATCAAGGGTCAGAGACACACCAAGGAGTTGGAACTCAAAACCAAAGGAACCCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | AGAACAGAGACACTCCAGGGGCCCCGTGACCAGGGATTTCCAAGCGCCAAAGAATCCTTGGTGTGTCTCTaGCCCTTGATCCCTGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: RTETLQGPRDQGFPSAKESLVCL*PLIPGS Trigger: TGACCCAGGGATCAAGGGTCAGAGACACACCAAGGA...TTCTTTGGCGCTTGGAAATCCCTGGTCACGGGGCCCCTGGAGTGTCTCTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTGGGTACATGCAGCTGGGCTaGCCTGAGAAAGCCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: WLVRVCGLTCSHCPCPCGYMQLG*PEKASS Trigger: ACTGGAGGCTTTCTCAGGTCAGCCCAGCTGCATGTA...CCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR GCA 90 bp | TGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTGGGTGGCAGACGCTTATCTTGCTaGCCTGCTGAGGTCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: WSGYAALHVPIVLVHVGGRRLSC*PAEVSR Trigger: CCTGGAGACCTCAGCAGGGCAGCAAGATAAGCGTCT...GCCACCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR CAA 90 bp | TCAGTGGCTGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTaGTCCATGTGGGTGGCAGAAAGGTGGAGGCTGAGGACACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SVAGQGMRPYMFPLS*SMWVAERWRLRTQK Trigger: TTTCTGTGTCCTCAGCCTCCACCTTTCTGCCACCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCAGCCACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | AAAATCACCAGGCAAGGCTTTCTCCCAGTTTGTTATTGCTGGGGCAGTGGGTGTAGAGCTGGGACCTGCTaGGAAGGCTGGAGCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: KITRQGFLPVCYCWGSGCRAGTC*EGWSRT Trigger: AGTCCTGCTCCAGCCTTCTCAGCAGGTCCCAGCTCT...ACACCCACTGCCCCAGCAATAACAAACTGGGAGAAAGCCTTGCCTGGTGATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | TGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTGGGTGGCTTCTTATGTCTTTGCTaGGGAAGCGGGAGGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: WSGYAALHVPIVLVHVGGFLCLC*GSGRWE Trigger: CTCCCACCTCCCGCTTCCTCAGCAAAGACATAAGAA...GCCACCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTGGGCACAGAAGGGAAAGCTaGCTTGGCCATGGGATGAGT | + |
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Preference number: 2 (lower is better) Translates to: WLVRVCGLTCSHCPCPCGHRRES*LGHGMS Trigger: ACTCATCCCATGGCCAAGGCAGCTTTCCCTTCTGTG...CCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGAGAGGTGACATTTCTAAGATGAGGCCTGATGGGCAGAGCAAGAACCGTTTCTTATGTCTTTGCTaGGGAAGCGGGAGGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PGRGDISKMRPDGQSKNRFLCLC*GSGRWE Trigger: CTCCCACCTCCCGCTTCCTCAGCAAAGACATAAGAA...ACGGTTCTTGCTCTGCCCATCAGGCCTCATCTTAGAAATGTCACCTCTCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | AAGGATTGTGCTGTGAGGAGGAGGGCTCTTTCACCATCCTCAAGGTCTAGGGTTTACATGCAGCTGGGCTaGCCTGAGAAAGCCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: KDCAVRRRALSPSSRSRVYMQLG*PEKASS Trigger: ACTGGAGGCTTTCTCAGGTCAGCCCAGCTGCATGTA...AACCCTAGACCTTGAGGATGGTGAAAGAGCCCTCCTCCTCACAGCACAATCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR GCA 90 bp | GGTGACATTTCTAAGATGAGGCCTGATGGGCAGAGCAAGAACCGTCTCAGCAGGAAACACAGGAGTGGGTaGGGCATATCACCAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GDISKMRPDGQSKNRLSRKHRSG*GISPVQ Trigger: CTGGACTGGTGATATGCCGCACCCACTCCTGTGTTT...CCTGCTGAGACGGTTCTTGCTCTGCCCATCAGGCCTCATCTTAGAAATGTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR GCA 90 bp | GATTGTGCTGTGAGGAGGAGGGCTCTTTCACCATCCTCAAGGTCTAGGGTTCCACAGAGAGGGGTTGCTTaGTCAGGAGCCTCATGTATC | + |
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Preference number: 2 (lower is better) Translates to: DCAVRRRALSPSSRSRVPQRGVA*SGASCI Trigger: GATACATGAGGCTCCTGAGCAAGCAACCCCTCTCTG...TGGAACCCTAGACCTTGAGGATGGTGAAAGAGCCCTCCTCCTCACAGCACAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR CCA 90 bp | AGAACAGAGACACTCCAGGGGCCCCGTGACCAGGGATTTCCAAGCGCCAAAGAAAGCCTCCAGTTTCTCTaGGCAAGTTCTGTGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: RTETLQGPRDQGFPSAKESLQFL*ASSVRE Trigger: TTCTCTCACAGAACTTGCCCAGAGAAACTGGAGGCT...TTCTTTGGCGCTTGGAAATCCCTGGTCACGGGGCCCCTGGAGTGTCTCTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGAGAGGTGACATTTCTAAGATGAGGCCTGATGGGCAGAGCAAGAACCGTTCTGGGCAAGTTCTGTaGGAGAATGACTCAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PGRGDISKMRPDGQSKNRSGQVL*ENDSGF Trigger: GAAGCCTGAGTCATTCTCTCACAGAACTTGCCCAGA...ACGGTTCTTGCTCTGCCCATCAGGCCTCATCTTAGAAATGTCACCTCTCCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTGGGAGCCTCCAGTTTCTCTaGGCAAGTTCTGTGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: WLVRVCGLTCSHCPCPCGSLQFL*ASSVRE Trigger: TTCTCTCACAGAACTTGCCCAGAGAAACTGGAGGCT...CCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | GATTGTGCTGTGAGGAGGAGGGCTCTTTCACCATCCTCAAGGTCTAGGGTTCCATGTTTACAGCAGTGGTaGAATTGGGGGTTCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: DCAVRRRALSPSSRSRVPCLQQW*NWGFLW Trigger: CCAAAGGAACCCCCAATTTCACCACTGCTGTAAACA...TGGAACCCTAGACCTTGAGGATGGTGAAAGAGCCCTCCTCCTCACAGCACAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR GCA 90 bp | AAAATCACCAGGCAAGGCTTTCTCCCAGTTTGTTATTGCTGGGGCAGTGGGTGTAAACACAGGAGTGGGTaGGGCATATCACCAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: KITRQGFLPVCYCWGSGCKHRSG*GISPVQ Trigger: CTGGACTGGTGATATGCCGCACCCACTCCTGTGTTT...ACACCCACTGCCCCAGCAATAACAAACTGGGAGAAAGCCTTGCCTGGTGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | CAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTAACACTGAGAGCTGGGACCTGCTaGGAAGGCTGGAGCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: QTTLLHNTHTVFISTLTLRAGTC*EGWSRT Trigger: AGTCCTGCTCCAGCCTTCTCAGCAGGTCCCAGCTCT...CAGTGTTAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | GACCAGGGATTTCCAAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATATCCTTGGTGTGTCTCTaGCCCTTGATCCCTGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: DQGFPSAKEYLKSVRHTISLVCL*PLIPGS Trigger: TGACCCAGGGATCAAGGGTCAGAGACACACCAAGGA...TATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTTGGAAATCCCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | AAGGATTGTGCTGTGAGGAGGAGGGCTCTTTCACCATCCTCAAGGTCTAGGGTTCATAACAGTCAGTCTTaGATTCAGCAGAAGTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: KDCAVRRRALSPSSRSRVHNSQS*IQQKSR Trigger: TCTAGACTTCTGCTGAATTCAAGACTGACTGTTATG...AACCCTAGACCTTGAGGATGGTGAAAGAGCCCTCCTCCTCACAGCACAATCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR CAA 90 bp | CTACACAATACTCATACTGTATTCATTTCAACACTAACACTGGCGTaGGCAGGTAAGGATTGTGCTGTGAGGAGGAGGGCTCTTTCACCA | + |
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Preference number: 2 (lower is better) Translates to: LHNTHTVFISTLTLA*AGKDCAVRRRALSP Trigger: TGGTGAAAGAGCCCTCCTCCTCACAGCACAATCCTTACCTGCCAACGCCAGTGTTAGTGTTGAAATGAATACAGTATGAGTATTGTGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR GCA 90 bp | GATTATATAGAGTCACATCTAGAAAAATCACCAGGCAAGGCTTTCTCCCAGTTTTCACCAGAGAGGGGTTaGTTGCTCAGGAGCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: DYIESHLEKSPGKAFSQFSPERG*LLRSLM Trigger: CATGAGGCTCCTGAGCAAGCAACCCCTCTCTGGTGA...AAACTGGGAGAAAGCCTTGCCTGGTGATTTTTCTAGATGTGACTCTATATAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR GCA 90 bp | CAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTAACACTGTCACCAGAGAGGGGTTaGTTGCTCAGGAGCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: QTTLLHNTHTVFISTLTLSPERG*LLRSLM Trigger: CATGAGGCTCCTGAGCAAGCAACCCCTCTCTGGTGA...CAGTGTTAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR CCA 90 bp | GACCAGGGATTTCCAAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATACCAGTTTGTTATTGCTaGGGCAGTGGGTGTTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: DQGFPSAKEYLKSVRHTIPVCYC*GSGCWR Trigger: TCTCCAACACCCACTGCCCCAGCAATAACAAACTGG...TATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTTGGAAATCCCTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | GACCAGGGATTTCCAAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATATGTTTACAGCAGTGGTaGAATTGGGGGTTCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: DQGFPSAKEYLKSVRHTICLQQW*NWGFLW Trigger: CCAAAGGAACCCCCAATTTCACCACTGCTGTAAACA...TATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTTGGAAATCCCTGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | AGTTGCCAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTATCTGGGCAAGTTCTGTaGGAGAATGACTCAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SCQTTLLHNTHTVFISTLSGQVL*ENDSGF Trigger: GAAGCCTGAGTCATTCTCTCACAGAACTTGCCCAGA...TAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTGGCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | GATTATATAGAGTCACATCTAGAAAAATCACCAGGCAAGGCTTTCTCCCAGTTTGTGACATTTCTAAGATaGGGCCTGATGGGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: DYIESHLEKSPGKAFSQFVTFLR*GLMGRA Trigger: TGCTCTGCCCATCAGGCCTCATCTTAGAAATGTCAC...AAACTGGGAGAAAGCCTTGCCTGGTGATTTTTCTAGATGTGACTCTATATAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | CAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTAACACTGGTGACATTTCTAAGATaGGGCCTGATGGGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: QTTLLHNTHTVFISTLTLVTFLR*GLMGRA Trigger: TGCTCTGCCCATCAGGCCTCATCTTAGAAATGTCAC...CAGTGTTAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGGCATACCATAAATTTGGTGGCTTATTCTTAACAGCTAGAGTTGCCAAAAGCAGTACTGGGATGTaGAAGGGAGTCTCTCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: CQAYHKFGGLFLTARVAKSSTGM*KGVSQD Trigger: ATCCTGAGAGACTCCCTTCCACATCCCAGTACTGCT...TTTGGCAACTCTAGCTGTTAAGAATAAGCCACCAAATTTATGGTATGCCTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR CCA 90 bp | CAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTAACACTGTGGGGCAGTGGGTGTTaGAGAAGTGAACAAAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: QTTLLHNTHTVFISTLTLWGSGC*RSEQKG Trigger: ACCCTTTTGTTCACTTCTCCAACACCCACTGCCCCA...CAGTGTTAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | AAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATAAATTTGGTGGCTTAATTCAGCACAAGACCTaGGGTTATACAAGAGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: KRQRIFKICQAYHKFGGLIQHKT*GYTRVF Trigger: AAACACTCTTGTATAACCTCAGGTCTTGTGCTGAAT...TAAGCCACCAAATTTATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR-3UTR TCA 90 bp | AAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATAAATTTGGTGGCTTACATAACAGTCAGTCTTaGATTCAGCAGAAGTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: KRQRIFKICQAYHKFGGLHNSQS*IQQKSR Trigger: TCTAGACTTCTGCTGAATTCAAGACTGACTGTTATG...TAAGCCACCAAATTTATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR GCA 72 bp | CACAGGGGCACATGCCACCACAGCTGTGCTACTGCATaGCCTGCGATGACTCTGCTGCTGCACACCTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: HRGTCHHSCATA*PAMTLLLHTWV Trigger: GACCCAGGTGTGCAGCAGCAGAGTCATCGCAGGGCATGCAGTAGCACAGCTGTGGTGGCATGTGCCCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR GCA 72 bp | TGTTCACAGGGGCACATGCCACCACAGCTGTGCTACTaGATGCCCTGCGATGACTCTGCTGCTGCACACCTG | + |
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Preference number: 3 (lower is better) Translates to: CSQGHMPPQLCY*MPCDDSAAAHL Trigger: CAGGTGTGCAGCAGCAGAGTCATCGCAGGGCATGCAGTAGCACAGCTGTGGTGGCATGTGCCCCTGTGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| 3UTR TCA 72 bp | CTTCCCATCTCTTCCCTGTGTAGAGCTGGGACCTGCTaGGAAGGCTGGAGCAGGACTTCACACTGCCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPISSLCRAGTC*EGWSRTSHCHP Trigger: TGGGTGGCAGTGTGAAGTCCTGCTCCAGCCTTCTCAGCAGGTCCCAGCTCTACACAGGGAAGAGATGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR TCA 72 bp | TGCTGCTGCAACCGACCGACCTTCTTATGTCTTTGCTaGGGAAGCGGGAGGTGGGAGGAGCAGTACTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CCCNRPTFLCLC*GSGRWEEQYWD Trigger: ATCCCAGTACTGCTCCTCCCACCTCCCGCTTCCTCAGCAAAGACATAAGAAGGTCGGTCGGTTGCAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR GCA 72 bp | GAGGTCCTTGTGTTATGTCACCAGAGAGGGGTTGCTTaGTCAGGAGCCTCATGTATCCCTGGGCTCAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: EVLVLCHQRGVA*SGASCIPGLST Trigger: TGTGCTGAGCCCAGGGATACATGAGGCTCCTGAGCAAGCAACCCCTCTCTGGTGACATAACACAAGGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTGGGTGGCAGGCTGATGGGAAATTaGAGCCCAGTGACATCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WSGYAALHVPIVLVHVGGRLMGN*SPVTSG Trigger: CCCTGATGTCACTGGGCTCAAATTTCCCATCAGCCT...GCCACCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR TCA 72 bp | CCTGAGAAAGCCTCCAGTTTCTCTGGGCAAGTTCTGTaGGAGAATGACTCAGGCTTCTGTAGCCTAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PEKASSFSGQVL*ENDSGFCSLGQ Trigger: CTGCCCTAGGCTACAGAAGCCTGAGTCATTCTCTCACAGAACTTGCCCAGAGAAACTGGAGGCTTTCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR TCA 72 bp | AGGCCTGATGGGCAGAGCAAGAACCGTCTCAGCAGGTaGCTATTCTCCTGCCTGTCAACACAATCCCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: RPDGQSKNRLSR*LFSCLSTQSHN Trigger: ATTGTGGGATTGTGTTGACAGGCAGGAGAATAGTCACCTGCTGAGACGGTTCTTGCTCTGCCCATCAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR CCA 72 bp | ATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTaGGTGGCAGAAAGGTGGAGGCTGAGGACACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: MRPYMFPLSLSM*VAERWRLRTQK Trigger: TTTCTGTGTCCTCAGCCTCCACCTTTCTGCCACCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGAGAGGTGACATTTCTAAGATGAGGCCTGATGGGCAGAGCAAGAACCGTGGGGTTCCTTTGGTTTaGAGTTCCAACTCCTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PGRGDISKMRPDGQSKNRGVPLV*SSNSLV Trigger: CACCAAGGAGTTGGAACTCAAAACCAAAGGAACCCC...ACGGTTCTTGCTCTGCCCATCAGGCCTCATCTTAGAAATGTCACCTCTCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR TCA 72 bp | CTTCTGAGGGTAGTAGTGTTCTACATGCAGCTGGGCTaGCCTGAGAAAGCCTCCAGTTTCTCTGGGCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLRVVVFYMQLG*PEKASSFSGQV Trigger: AACTTGCCCAGAGAAACTGGAGGCTTTCTCAGGTCAGCCCAGCTGCATGTAGAACACTACTACCCTCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR CCA 72 bp | ACTGCATGCCCTGCGATGACTCTGCTGCTGCACACCTaGGTCATCCATTTCACCAGATTCCAAATGGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: TACPAMTLLLHT*VIHFTRFQMVY Trigger: GTAAACCATTTGGAATCTGGTGAAATGGATGACCCAGGTGTGCAGCAGCAGAGTCATCGCAGGGCATGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGAAAGCCTCCAGTTTCTCTGGGCAAGTTCTGTGAGAGAATGACTCAGGCTGGGGTTCCTTTGGTTTaGAGTTCCAACTCCTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LRKPPVSLGKFCERMTQAGVPLV*SSNSLV Trigger: CACCAAGGAGTTGGAACTCAAAACCAAAGGAACCCC...AGCCTGAGTCATTCTCTCACAGAACTTGCCCAGAGAAACTGGAGGCTTTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR CCA 72 bp | ATCACCAGGCAAGGCTTTCTCCCAGTTTGTTATTGCTaGGGCAGTGGGTGTTGGAGAAGTGAACAAAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ITRQGFLPVCYC*GSGCWRSEQKG Trigger: ACCCTTTTGTTCACTTCTCCAACACCCACTGCCCCAGCAATAACAAACTGGGAGAAAGCCTTGCCTGGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGAAAGCCTCCAGTTTCTCTGGGCAAGTTCTGTGAGAGAATGACTCAGGCTAAATTGGGGGTTCCTTaGGTTTTGAGTTCCAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LRKPPVSLGKFCERMTQAKLGVP*VLSSNS Trigger: GGAGTTGGAACTCAAAACCAAAGGAACCCCCAATTT...AGCCTGAGTCATTCTCTCACAGAACTTGCCCAGAGAAACTGGAGGCTTTCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR GCA 72 bp | AGAGTCTCTGGTAAGGTCATCAGCATTTTCAGTTTCTaGTGCTGCAACCGACCGACCTTCTTATGTCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RVSGKVISIFSF*CCNRPTFLCLC Trigger: GCAAAGACATAAGAAGGTCGGTCGGTTGCAGCAGCAGAAACTGAAAATGCTGATGACCTTACCAGAGACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR TCA 72 bp | CCTTTGGTTTTGAGTTCCAACTCCTTGGTGTGTCTCTaGCCCTTGATCCCTGGGTCAGGATTAAACAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: PLVLSSNSLVCL*PLIPGSGLNKS Trigger: TGATTTGTTTAATCCTGACCCAGGGATCAAGGGTCAGAGACACACCAAGGAGTTGGAACTCAAAACCAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR CCA 72 bp | TGCACACCTGGGTCATCCATTTCACCAGATTCCAAATaGTTTACTCCACTACTCACAATCCCTCTCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: CTPGSSISPDSK*FTPLLTIPLSS Trigger: AGATGAGAGAGGGATTGTGAGTAGTGGAGTAAACCATTTGGAATCTGGTGAAATGGATGACCCAGGTGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR CCA 72 bp | TACTCACAATCCCTCTCTCATCTCCTTTGTGTTCATTaGCTTAAGTTTTCCCTCTACTACTTAGGGCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: YSQSLSHLLCVH*LKFSLYYLGLC Trigger: GCATAGCCCTAAGTAGTAGAGGGAAAACTTAAGCCAATGAACACAAAGGAGATGAGAGAGGGATTGTGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR-3UTR CAA 90 bp | AAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATAAATTTGGTGGCTTAAGGCTGATGGGAAATTaGAGCCCAGTGACATCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KRQRIFKICQAYHKFGGLRLMGN*SPVTSG Trigger: CCCTGATGTCACTGGGCTCAAATTTCCCATCAGCCT...TAAGCCACCAAATTTATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGCCAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTAGTATCTCTGAGGTCCTaGTGTTATGTCACCAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SCQTTLLHNTHTVFISTLVSLRS*CYVTRE Trigger: CTCTCTGGTGACATAACACAAGGACCTCAGAGATAC...TAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTGGCAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR-3UTR CAA 90 bp | AAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATAAATTTGGTGGCTTAGTATCTCTGAGGTCCTaGTGTTATGTCACCAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KRQRIFKICQAYHKFGGLVSLRS*CYVTRE Trigger: CTCTCTGGTGACATAACACAAGGACCTCAGAGATAC...TAAGCCACCAAATTTATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR GCA 90 bp | AGAACAGAGACACTCCAGGGGCCCCGTGACCAGGGATTTCCAAGCGCCAAAGAAGATCCTGCTGTCCAGTaGTGCCTCTGCCATAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTETLQGPRDQGFPSAKEDPAVQ*CLCHRG Trigger: CCCTCTATGGCAGAGGCAGCACTGGACAGCAGGATC...TTCTTTGGCGCTTGGAAATCCCTGGTCACGGGGCCCCTGGAGTGTCTCTGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR GCA 90 bp | TGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTGGGTGGCGATCCTGCTGTCCAGTaGTGCCTCTGCCATAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WSGYAALHVPIVLVHVGGDPAVQ*CLCHRG Trigger: CCCTCTATGGCAGAGGCAGCACTGGACAGCAGGATC...GCCACCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR TCA 90 bp | TGGCTGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTGGGGGTCTGCAGAACATGTaGGGGCAGAGGAGGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: WLVRVCGLTCSHCPCPCGGLQNM*GQRRIH Trigger: GTGTATCCTCCTCTGCCCTCACATGTTCTGCAGACC...CCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
||
| CDS-3UTR GCA 90 bp | TGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTGGGTGGCTCAAAGGTGCTGTCCTaGCCTCCACTCTCACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WSGYAALHVPIVLVHVGGSKVLS*PPLSPV Trigger: CACTGGTGAGAGTGGAGGGCAGGACAGCACCTTTGA...GCCACCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR TCA 90 bp | AGAACAGAGACACTCCAGGGGCCCCGTGACCAGGGATTTCCAAGCGCCAAAGAACTAGTCTCCAACCACTaGTGTAAACACGGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RTETLQGPRDQGFPSAKELVSNH*CKHGQQ Trigger: CTGTTGGCCGTGTTTACATCAGTGGTTGGAGACTAG...TTCTTTGGCGCTTGGAAATCCCTGGTCACGGGGCCCCTGGAGTGTCTCTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR GCA 90 bp | AGGTCATCAGCATTTTCAGTTTCTGCTGCTGCAACCGACCGACCTTCTTATGTCTCTCACCAGTGCCATTaGTGCTGCCACTGGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSSAFSVSAAATDRPSYVSHQCH*CCHWAP Trigger: GGGGGCCCAGTGGCAGCAGCAATGGCACTGGTGAGA...GACATAAGAAGGTCGGTCGGTTGCAGCAGCAGAAACTGAAAATGCTGATGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR GCA 90 bp | AAGGATTGTGCTGTGAGGAGGAGGGCTCTTTCACCATCCTCAAGGTCTAGGGTTCTCCACTCTCACCAGTaGCATTGCTGCTGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDCAVRRRALSPSSRSRVLHSHQ*HCCCHW Trigger: CCAGTGGCAGCAGCAATGGCACTGGTGAGAGTGGAG...AACCCTAGACCTTGAGGATGGTGAAAGAGCCCTCCTCCTCACAGCACAATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTGGGTGGCGCCCTTTACTTGCCATaGCTGCTTGCCAGCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSGYAALHVPIVLVHVGGALYLP*LLASKA Trigger: AGCTTTGCTGGCAAGCAGCCATGGCAAGTAAAGGGC...GCCACCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
||
| CDS-3UTR CCA 90 bp | GATTGTGCTGTGAGGAGGAGGGCTCTTTCACCATCCTCAAGGTCTAGGGTTCCAGGCCAACAGAAGAGGTaGCCACACAGGCTGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: DCAVRRRALSPSSRSRVPGQQKR*PHRLMT Trigger: TGTCATCAGCCTGTGTGGCCACCTCTTCTGTTGGCC...TGGAACCCTAGACCTTGAGGATGGTGAAAGAGCCCTCCTCCTCACAGCACAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR CCA 90 bp | GATTGTGCTGTGAGGAGGAGGGCTCTTTCACCATCCTCAAGGTCTAGGGTTCCAGAGGAGTCTTCTCTCTaGGATCCTGCTGTCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DCAVRRRALSPSSRSRVPEESSL*DPAVQC Trigger: GCACTGGACAGCAGGATCCCAGAGAGAAGACTCCTC...TGGAACCCTAGACCTTGAGGATGGTGAAAGAGCCCTCCTCCTCACAGCACAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAGAGGTGACATTTCTAAGATGAGGCCTGATGGGCAGAGCAAGAACCGTGAGGAGTCTTCTCTCTaGGATCCTGCTGTCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGRGDISKMRPDGQSKNREESSL*DPAVQC Trigger: GCACTGGACAGCAGGATCCCAGAGAGAAGACTCCTC...ACGGTTCTTGCTCTGCCCATCAGGCCTCATCTTAGAAATGTCACCTCTCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR GCA 90 bp | AAGGATTGTGCTGTGAGGAGGAGGGCTCTTTCACCATCCTCAAGGTCTAGGGTTCTTGCCATGGCTGCTTaGCAGCAAAGCTTCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KDCAVRRRALSPSSRSRVLAMAA*QQSFQG Trigger: TCCCTGGAAGCTTTGCTGGCAAGCAGCCATGGCAAG...AACCCTAGACCTTGAGGATGGTGAAAGAGCCCTCCTCCTCACAGCACAATCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
||
| CDS-3UTR GCA 90 bp | AGAACAGAGACACTCCAGGGGCCCCGTGACCAGGGATTTCCAAGCGCCAAAGAATGTCCAGGCATATGTTaGACTCAAAGGTGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTETLQGPRDQGFPSAKECPGIC*TQRCCP Trigger: AGGACAGCACCTTTGAGTGCAACATATGCCTGGACA...TTCTTTGGCGCTTGGAAATCCCTGGTCACGGGGCCCCTGGAGTGTCTCTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR GCA 90 bp | AAGGATTGTGCTGTGAGGAGGAGGGCTCTTTCACCATCCTCAAGGTCTAGGGTTTGTTGCACTCAAAGGTaGTGTCCTGCCCTCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KDCAVRRRALSPSSRSRVCCTQR*CPALHS Trigger: AGAGTGGAGGGCAGGACAGCACCTTTGAGTGCAACA...AACCCTAGACCTTGAGGATGGTGAAAGAGCCCTCCTCCTCACAGCACAATCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTTCTAAGATGAGGCCTGATGGGCAGAGCAAGAACCGTCTCAGCAGGGCCAGCTTTGCAGACTaGACACACTTGTCTGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDISKMRPDGQSKNRLSRASFAD*THLSVR Trigger: CCTAACAGACAAGTGTGTCCAGTCTGCAAAGCTGGC...CCTGCTGAGACGGTTCTTGCTCTGCCCATCAGGCCTCATCTTAGAAATGTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTATCTCACCAGTGCCATTaGTGCTGCCACTGGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SCQTTLLHNTHTVFISTLSHQCH*CCHWAP Trigger: GGGGGCCCAGTGGCAGCAGCAATGGCACTGGTGAGA...TAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTGGCAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR CCA 90 bp | GACCAGGGATTTCCAAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATATGTCCCAGGGACAGCTaGAGGAGGCCGTCCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: DQGFPSAKEYLKSVRHTICPRDS*RRPSII Trigger: AATGATGGACGGCCTCCTCCAGCTGTCCCTGGGACA...TATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTTGGAAATCCCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR CCA 90 bp | CAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTAACACTGTGTCCCAGGGACAGCTaGAGGAGGCCGTCCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: QTTLLHNTHTVFISTLTLCPRDS*RRPSII Trigger: AATGATGGACGGCCTCCTCCAGCTGTCCCTGGGACA...CAGTGTTAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| 3UTR CAA 72 bp | ACTCATACTGTATTCATTTCAACACTAACACTGGCGTaGGCAGGTAAGGATTGTGCTGTGAGGAGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: THTVFISTLTLA*AGKDCAVRRRA Trigger: AGCCCTCCTCCTCACAGCACAATCCTTACCTGCCAACGCCAGTGTTAGTGTTGAAATGAATACAGTATGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR GCA 90 bp | CAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTAACACTGTCAAAGGTGCTGTCCTaGCCTCCACTCTCACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QTTLLHNTHTVFISTLTLSKVLS*PPLSPV Trigger: CACTGGTGAGAGTGGAGGGCAGGACAGCACCTTTGA...CAGTGTTAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR CCA 90 bp | GATTATATAGAGTCACATCTAGAAAAATCACCAGGCAAGGCTTTCTCCCAGTTTGGCCAACAGAAGAGGTaGCCACACAGGCTGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: DYIESHLEKSPGKAFSQFGQQKR*PHRLMT Trigger: TGTCATCAGCCTGTGTGGCCACCTCTTCTGTTGGCC...AAACTGGGAGAAAGCCTTGCCTGGTGATTTTTCTAGATGTGACTCTATATAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTATGTTGCACTCAAAGGTaGTGTCCTGCCCTCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCQTTLLHNTHTVFISTLCCTQR*CPALHS Trigger: AGAGTGGAGGGCAGGACAGCACCTTTGAGTGCAACA...TAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTGGCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR CCA 90 bp | CAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTAACACTGCATTGGAATTCTCAGTaGATGCAGAGGCCGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QTTLLHNTHTVFISTLTLHWNSQ*MQRPKA Trigger: GGCCTTCGGCCTCTGCATCCACTGAGAATTCCAATG...CAGTGTTAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR CCA 90 bp | TGTCAGGCATACCATAAATTTGGTGGCTTATTCTTAACAGCTAGAGTTGCCAAACATTGGAATTCTCAGTaGATGCAGAGGCCGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CQAYHKFGGLFLTARVAKHWNSQ*MQRPKA Trigger: GGCCTTCGGCCTCTGCATCCACTGAGAATTCCAATG...TTTGGCAACTCTAGCTGTTAAGAATAAGCCACCAAATTTATGGTATGCCTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR TCA 90 bp | CAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTAACACTGCTAGTCTCCAACCACTaGTGTAAACACGGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QTTLLHNTHTVFISTLTLLVSNH*CKHGQQ Trigger: CTGTTGGCCGTGTTTACATCAGTGGTTGGAGACTAG...CAGTGTTAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
||
| CDS-3UTR GCA 90 bp | TGTCAGGCATACCATAAATTTGGTGGCTTATTCTTAACAGCTAGAGTTGCCAAATGTCCAGGCATATGTTaGACTCAAAGGTGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CQAYHKFGGLFLTARVAKCPGIC*TQRCCP Trigger: AGGACAGCACCTTTGAGTGCAACATATGCCTGGACA...TTTGGCAACTCTAGCTGTTAAGAATAAGCCACCAAATTTATGGTATGCCTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS-3UTR GCA 90 bp | TGTCAGGCATACCATAAATTTGGTGGCTTATTCTTAACAGCTAGAGTTGCCAAAAAGACAATCCCAGTCTaGTTGGCGTTGATTGATAGG | + |
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Preference number: 4 (lower is better) Translates to: CQAYHKFGGLFLTARVAKKTIPV*LALIDR Trigger: CCTATCAATCAACGCCAAGCAGACTGGGATTGTCTT...TTTGGCAACTCTAGCTGTTAAGAATAAGCCACCAAATTTATGGTATGCCTGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS-3UTR TCA 90 bp | GACCAGGGATTTCCAAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATACCAAATCCAAATCCTTaGAATCCCCCTCTATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: DQGFPSAKEYLKSVRHTIPNPNP*NPPLFS Trigger: AGAAAATAGAGGGGGATTTCAAGGATTTGGATTTGG...TATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTTGGAAATCCCTGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS GCA 90 bp | TCCTTGGCTGTGTCCAGGCATATGTTGCACTCAAAGGTGCTGTCCTaGCCTCCACTCTCACCAGTGCCATTGCTGCTGCCACTGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SLAVSRHMLHSKVLS*PPLSPVPLLLPLGP Trigger: GGGGCCCAGTGGCAGCAGCAATGGCACTGGTGAGAGTGGAGGGCAGGACAGCACCTTTGAGTGCAACATATGCCTGGACACAGCCAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS-3UTR CAA 90 bp | TGGTCAGGGTATGCGGCCTTACATGTTCCCATTGTCCTTGTCCATGTGGGTGGCCTCTCACCAGTGCCATaGCTGCTGCCACTGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: WSGYAALHVPIVLVHVGGLSPVP*LLPLGP Trigger: GGGGCCCAGTGGCAGCAGCAATGGCACTGGTGAGAG...GCCACCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS-3UTR CAA 90 bp | GATTGTGCTGTGAGGAGGAGGGCTCTTTCACCATCCTCAAGGTCTAGGGTTCCAACTTGCCATGGCTGCTaGCCAGCAAAGCTTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: DCAVRRRALSPSSRSRVPTCHGC*PAKLPG Trigger: CCCTGGAAGCTTTGCTGGCAAGCAGCCATGGCAAGT...TGGAACCCTAGACCTTGAGGATGGTGAAAGAGCCCTCCTCCTCACAGCACAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS-3UTR CAA 90 bp | AGGTCATCAGCATTTTCAGTTTCTGCTGCTGCAACCGACCGACCTTCTTATGTCCTCTCACCAGTGCCATaGCTGCTGCCACTGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: RSSAFSVSAAATDRPSYVLSPVP*LLPLGP Trigger: GGGGCCCAGTGGCAGCAGCAATGGCACTGGTGAGAG...GACATAAGAAGGTCGGTCGGTTGCAGCAGCAGAAACTGAAAATGCTGATGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS GCA 90 bp | TCAGTGGATGCAGAGGCCGAAGGCCCTTTACTTGCCATGGCTGCTTaGCAGCAAAGCTTCCAGGGAAGATTCTCAAGACAATCCCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: SVDAEAEGPLLAMAA*QQSFQGRFSRQSQS Trigger: AGACTGGGATTGTCTTGAGAATCTTCCCTGGAAGCTTTGCTGGCAAGCAGCCATGGCAAGTAAAGGGCCTTCGGCCTCTGCATCCACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS-3UTR CAA 90 bp | AGGTCATCAGCATTTTCAGTTTCTGCTGCTGCAACCGACCGACCTTCTTATGTCCCGAAGGCCCTTTACTaGCCATGGCTGCTTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RSSAFSVSAAATDRPSYVPKALY*PWLLAS Trigger: GCTGGCAAGCAGCCATGGCAAGTAAAGGGCCTTCGG...GACATAAGAAGGTCGGTCGGTTGCAGCAGCAGAAACTGAAAATGCTGATGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS-3UTR CAA 90 bp | GATTGTGCTGTGAGGAGGAGGGCTCTTTCACCATCCTCAAGGTCTAGGGTTCCACTGATGACAGCATCCTaGGCTGTGTCCAGGCATATG | + |
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Preference number: 5 (lower is better) Translates to: DCAVRRRALSPSSRSRVPLMTAS*AVSRHM Trigger: CATATGCCTGGACACAGCCAAGGATGCTGTCATCAG...TGGAACCCTAGACCTTGAGGATGGTGAAAGAGCCCTCCTCCTCACAGCACAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGAGGTGACATTTCTAAGATGAGGCCTGATGGGCAGAGCAAGAACCGTGCAGACTGGACACACTaGTCTGTTAGGCCTAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: PGRGDISKMRPDGQSKNRADWTH*SVRPSL Trigger: GAGACTAGGCCTAACAGACAAGTGTGTCCAGTCTGC...ACGGTTCTTGCTCTGCCCATCAGGCCTCATCTTAGAAATGTCACCTCTCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS GCA 90 bp | ATTCTCAGTGGATGCAGAGGCCGAAGGCCCTTTACTTGCCATGGCTaGTTGCCAGCAAAGCTTCCAGGGAAGATTCTCAAGACAATCCCA | + |
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Preference number: 5 (lower is better) Translates to: ILSGCRGRRPFTCHG*LPAKLPGKILKTIP Trigger: TGGGATTGTCTTGAGAATCTTCCCTGGAAGCTTTGCTGGCAAGCAGCCATGGCAAGTAAAGGGCCTTCGGCCTCTGCATCCACTGAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS GCA 90 bp | TGCATTGGAATTCTCAGTGGATGCAGAGGCCGAAGGCCCTTTACTTaGCATGGCTGCTTGCCAGCAAAGCTTCCAGGGAAGATTCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: CIGILSGCRGRRPFT*HGCLPAKLPGKILK Trigger: CTTGAGAATCTTCCCTGGAAGCTTTGCTGGCAAGCAGCCATGGCAAGTAAAGGGCCTTCGGCCTCTGCATCCACTGAGAATTCCAATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS-3UTR CAA 90 bp | AGGTCATCAGCATTTTCAGTTTCTGCTGCTGCAACCGACCGACCTTCTTATGTCGCAGACTGGACACACTaGTCTGTTAGGCCTAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: RSSAFSVSAAATDRPSYVADWTH*SVRPSL Trigger: GAGACTAGGCCTAACAGACAAGTGTGTCCAGTCTGC...GACATAAGAAGGTCGGTCGGTTGCAGCAGCAGAAACTGAAAATGCTGATGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS-3UTR CAA 90 bp | AGGTCATCAGCATTTTCAGTTTCTGCTGCTGCAACCGACCGACCTTCTTATGTCCCAGTCTGCTTGGCGTaGATTGATAGGTCTGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RSSAFSVSAAATDRPSYVPVCLA*IDRSAE Trigger: TTCTGCAGACCTATCAATCAACGCCAAGCAGACTGG...GACATAAGAAGGTCGGTCGGTTGCAGCAGCAGAAACTGAAAATGCTGATGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS-3UTR CAA 90 bp | GACCAGGGATTTCCAAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATACGGCTGATGCCAGCTTaGCAGACTGGACACACTTGT | + |
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Preference number: 5 (lower is better) Translates to: DQGFPSAKEYLKSVRHTIRLMPA*QTGHTC Trigger: ACAAGTGTGTCCAGTCTGCAAAGCTGGCATCAGCCG...TATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTTGGAAATCCCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS-3UTR CAA 90 bp | CTGAGAAAGCCTCCAGTTTCTCTGGGCAAGTTCTGTGAGAGAATGACTCAGGCTTCCAAATCCAAATCCTaGAAATCCCCCTCTATTTTC | + |
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Preference number: 5 (lower is better) Translates to: LRKPPVSLGKFCERMTQASKSKS*KSPSIF Trigger: GAAAATAGAGGGGGATTTCAAGGATTTGGATTTGGA...AGCCTGAGTCATTCTCTCACAGAACTTGCCCAGAGAAACTGGAGGCTTTCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS-3UTR CAA 90 bp | AGTTGCCAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTAGTGTCCAGGCATATGTaGCACTCAAAGGTGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SCQTTLLHNTHTVFISTLVSRHM*HSKVLS Trigger: GGACAGCACCTTTGAGTGCAACATATGCCTGGACAC...TAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTGGCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS-3UTR CAA 90 bp | AAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATAAATTTGGTGGCTTACGGCTGATGCCAGCTTaGCAGACTGGACACACTTGT | + |
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Preference number: 5 (lower is better) Translates to: KRQRIFKICQAYHKFGGLRLMPA*QTGHTC Trigger: ACAAGTGTGTCCAGTCTGCAAAGCTGGCATCAGCCG...TAAGCCACCAAATTTATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS-3UTR CAA 90 bp | AAGCGCCAAAGAATATTTAAAATCTGTCAGGCATACCATAAATTTGGTGGCTTAGTGTCCAGGCATATGTaGCACTCAAAGGTGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: KRQRIFKICQAYHKFGGLVSRHM*HSKVLS Trigger: GGACAGCACCTTTGAGTGCAACATATGCCTGGACAC...TAAGCCACCAAATTTATGGTATGCCTGACAGATTTTAAATATTCTTTGGCGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS-3UTR CAA 90 bp | CAAACCACCCTCCTACACAATACTCATACTGTATTCATTTCAACACTAACACTGTCCAAATCCAAATCCTaGAAATCCCCCTCTATTTTC | + |
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Preference number: 5 (lower is better) Translates to: QTTLLHNTHTVFISTLTLSKSKS*KSPSIF Trigger: GAAAATAGAGGGGGATTTCAAGGATTTGGATTTGGA...CAGTGTTAGTGTTGAAATGAATACAGTATGAGTATTGTGTAGGAGGGTGGTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS CAA 90 bp | CCACACAGGCTGATGACAGCATCCTTGGCTGTGTCCAGGCATATGTaGCACTCAAAGGTGCTGTCCTGCCCTCCACTCTCACCAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PHRLMTASLAVSRHM*HSKVLSCPPLSPVP Trigger: TGGCACTGGTGAGAGTGGAGGGCAGGACAGCACCTTTGAGTGCAACATATGCCTGGACACAGCCAAGGATGCTGTCATCAGCCTGTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS GCA 72 bp | GGATGCAGAGGCCGAAGGCCCTTTACTTGCCATGGCTaGTTGCCAGCAAAGCTTCCAGGGAAGATTCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: GCRGRRPFTCHG*LPAKLPGKILK Trigger: CTTGAGAATCTTCCCTGGAAGCTTTGCTGGCAAGCAGCCATGGCAAGTAAAGGGCCTTCGGCCTCTGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS GCA 72 bp | ATTCTCAGTGGATGCAGAGGCCGAAGGCCCTTTACTTaGCATGGCTGCTTGCCAGCAAAGCTTCCAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ILSGCRGRRPFT*HGCLPAKLPGK Trigger: CTTCCCTGGAAGCTTTGCTGGCAAGCAGCCATGGCAAGTAAAGGGCCTTCGGCCTCTGCATCCACTGAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS GCA 72 bp | GCAGAGGCCGAAGGCCCTTTACTTGCCATGGCTGCTTaGCAGCAAAGCTTCCAGGGAAGATTCTCAAGACAA | + |
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Preference number: 6 (lower is better) Translates to: AEAEGPLLAMAA*QQSFQGRFSRQ Trigger: TTGTCTTGAGAATCTTCCCTGGAAGCTTTGCTGGCAAGCAGCCATGGCAAGTAAAGGGCCTTCGGCCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS CAA 72 bp | AATTCTCAGTGGATGCAGAGGCCGAAGGCCCTTTACTaGCCATGGCTGCTTGCCAGCAAAGCTTCCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: NSQWMQRPKALY*PWLLASKASRE Trigger: TTCCCTGGAAGCTTTGCTGGCAAGCAGCCATGGCAAGTAAAGGGCCTTCGGCCTCTGCATCCACTGAGAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS CAA 72 bp | CTGATGACAGCATCCTTGGCTGTGTCCAGGCATATGTaGCACTCAAAGGTGCTGTCCTGCCCTCCACTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LMTASLAVSRHM*HSKVLSCPPLS Trigger: TGAGAGTGGAGGGCAGGACAGCACCTTTGAGTGCAACATATGCCTGGACACAGCCAAGGATGCTGTCATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064364.3 ENSMUST00000077078.12 |
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| CDS CAA 90 bp | CTGCATTGGAATTCTCAGTGGATGCAGAGGCCGAAGGCCCTTTACTaGCCATGGCTGCTTGCCAGCAAAGCTTCCAGGGAAGATTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: LHWNSQWMQRPKALY*PWLLASKASREDSQ Trigger: TTGAGAATCTTCCCTGGAAGCTTTGCTGGCAAGCAGCCATGGCAAGTAAAGGGCCTTCGGCCTCTGCATCCACTGAGAATTCCAATGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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| CDS GCA 72 bp | AAGCTTCCAGGGAAGATTCTCAAGACAATCCCAGTCTaGTTGGCGTTGATTGATAGGTCTGCAGAACATGTG | + |
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Preference number: 6 (lower is better) Translates to: KLPGKILKTIPV*LALIDRSAEHV Trigger: CACATGTTCTGCAGACCTATCAATCAACGCCAAGCAGACTGGGATTGTCTTGAGAATCTTCCCTGGAAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064364.3 |
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