Pregenerated sensors for RNF182 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044164Ensembl transcript IDs: ENSMUST00000059986.3
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGAACCCCGGTACCGCTCAGCAGAACAGTTGGGTTCTCAGTGCCTaGCACCAGGGTAGCTGGTGGCCTGTTGCTGGGGTCTTCCTATTA | + |
|
Preference number: 1 (lower is better) Translates to: LNPGTAQQNSWVLSA*HQGSWWPVAGVFLL Trigger: TAATAGGAAGACCCCAGCAACAGGCCACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAGCGGTACCGGGGTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR GCA 90 bp | AACTTCAGCACTGCAGACATCACACAAACTAGCAAAACACAGAGCTaGTCCGGAGCCTTCTGGAAATCTCTTCCTGCGGTCGCTCGCCAG | + |
|
Preference number: 1 (lower is better) Translates to: NFSTADITQTSKTQS*SGAFWKSLPAVARQ Trigger: CTGGCGAGCGACCGCAGGAAGAGATTTCCAGAAGGCTCCGGAGCAGCTCTGTGTTTTGCTAGTTTGTGTGATGTCTGCAGTGCTGAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR TCA 90 bp | ATACCTTTACAGAAAATAAAGACTCAAGTCTATCCCCAGACTGACTaGACAGCATCAGCCGTGAGTGAGCTACACTTAACCACCTCCACT | + |
|
Preference number: 1 (lower is better) Translates to: IPLQKIKTQVYPQTD*TASAVSELHLTTST Trigger: AGTGGAGGTGGTTAAGTGTAGCTCACTCACGGCTGATGCTGTTCAGTCAGTCTGGGGATAGACTTGAGTCTTTATTTTCTGTAAAGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CCA 90 bp | GGAATCGTAAATGTATTTAGCTCTAAGTTGGGGTTGAAATCTCACTaGACCACATCCCACATATACCTTCTTCTTACGTGTACCTCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: GIVNVFSSKLGLKSH*TTSHIYLLLTCTSD Trigger: GTCTGAGGTACACGTAAGAAGAAGGTATATGTGGGATGTGGTCCAGTGAGATTTCAACCCCAACTTAGAGCTAAATACATTTACGATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CCA 90 bp | AAGGGTGAGAAGAAACCTTCATACGCTGATAGCAACACATTTAAATaGAACTTTGTTCAGGATAAGGGGTTAGAAATCAAACAAAACATT | + |
|
Preference number: 1 (lower is better) Translates to: KGEKKPSYADSNTFK*NFVQDKGLEIKQNI Trigger: AATGTTTTGTTTGATTTCTAACCCCTTATCCTGAACAAAGTTCCATTTAAATGTGTTGCTATCAGCGTATGAAGGTTTCTTCTCACCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR CCA 90 bp | CACCTCAAGCAGGGTGTCCGCTTGGCGTGGCTTCACTGTGCCTTCGCGTGGACTCACCAGGGTAGCTGGTaGCCTGTTGCTGGGGTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HLKQGVRLAWLHCAFAWTHQGSW*PVAGVF Trigger: GAAGACCCCAGCAACAGGCCACCAGCTACCCTGGTG...AGTCCACGCGAAGGCACAGTGAAGCCACGCCAAGCGGACACCCTGCTTGAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR TCA 90 bp | CACCTCAAGCAGGGTGTCCGCTTGGCGTGGCTTCACTGTGCCTTCGCGTGGACTCGTAGCCATATGCGCTaGGTTTCCTATGTTGCATAT | + |
|
Preference number: 2 (lower is better) Translates to: HLKQGVRLAWLHCAFAWTRSHMR*VSYVAY Trigger: ATATGCAACATAGGAAACTCAGCGCATATGGCTACG...AGTCCACGCGAAGGCACAGTGAAGCCACGCCAAGCGGACACCCTGCTTGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGCAGAACAGTTGGGTTCTCAGTGCCTGGCACCAGGGTAGCTGGTGGCCTGGGGAAAAGGCCTGGGTaGAAGATAAATAGCCATGTC | + |
|
Preference number: 2 (lower is better) Translates to: LSRTVGFSVPGTRVAGGLGKRPG*KINSHV Trigger: GACATGGCTATTTATCTTCCACCCAGGCCTTTTCCC...CAGGCCACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR GCA 90 bp | CACTGTGCCTTCGCGTGGACTTTCATAGGACATAAGCTTGAACCCCGGTACCGCCCCTGGGCCTATCTATaGCTTTGTTCTGGGCTATCT | + |
|
Preference number: 2 (lower is better) Translates to: HCAFAWTFIGHKLEPRYRPWAYL*LCSGLS Trigger: AGATAGCCCAGAACAAAGGCATAGATAGGCCCAGGG...GCGGTACCGGGGTTCAAGCTTATGTCCTATGAAAGTCCACGCGAAGGCACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR GCA 90 bp | CACTGTGCCTTCGCGTGGACTTTCATAGGACATAAGCTTGAACCCCGGTACCGCGCTATGTCTGTCTTCTaGGGCCACCCTGCTAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: HCAFAWTFIGHKLEPRYRAMSVF*GHPAKT Trigger: TGTTTTAGCAGGGTGGCCGCAGAAGACAGACATAGC...GCGGTACCGGGGTTCAAGCTTATGTCCTATGAAAGTCCACGCGAAGGCACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCCCACCTCATGAAAAGAAGTCCATCCCGAAGCCACGAAGCTTATACCTTTACGGTTCCCCACAGCAGTaGAGGACTCAGCAAAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: PPPHEKKSIPKPRSLYLYGSPQQ*RTQQSQ Trigger: CTGACTTTGCTGAGTCCTGCACTGCTGTGGGGAACC...GTAAAGGTATAAGCTTCGTGGCTTCGGGATGGACTTCTTTTCATGAGGTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR GCA 90 bp | GTACCGCTCAGCAGAACAGTTGGGTTCTCAGTGCCTGGCACCAGGGTAGCTGGTGTGAATATGCCCACATaGAAAAATGGCTCAGATCTT | + |
|
Preference number: 2 (lower is better) Translates to: VPLSRTVGFSVPGTRVAGVNMPT*KNGSDL Trigger: AAGATCTGAGCCATTTTTGCATGTGGGCATATTCAC...ACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAGCGGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR CCA 90 bp | CACATCCCACATATACCTTCTTCTTACGTGTACCTCAGACATACACGTTCTCAATGGGTTCTCAGTGCCTaGCACCAGGGTAGCTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: HIPHIPSSYVYLRHTRSQWVLSA*HQGSWW Trigger: CCACCAGCTACCCTGGTGCCAGGCACTGAGAACCCA...TTGAGAACGTGTATGTCTGAGGTACACGTAAGAAGAAGGTATATGTGGGATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGGAGGTTAGAACTGGCCCCCTGCAACTGGGTCACACAACAAATATTTCACCTTCTAAGACAAGGGTaGGAAGAAACCTTCATACGC | + |
|
Preference number: 2 (lower is better) Translates to: VGRLELAPCNWVTQQIFHLLRQG*EETFIR Trigger: GCGTATGAAGGTTTCTTCTCACCCTTGTCTTAGAAG...GTGAAATATTTGTTGTGTGACCCAGTTGCAGGGGGCCAGTTCTAACCTCCCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGTGAATATGCCCACATGCAAAAATGGCTCAGATCTTTCCAGAGAAGCCTGGAGGGTGTCGGGGACTaGACAGAAGCAAAAGGAATC | + |
|
Preference number: 2 (lower is better) Translates to: SSEYAHMQKWLRSFQRSLEGVGD*TEAKGI Trigger: GATTCCTTTTGCTTCTGTGCAGTCCCCGACACCCTC...CAGGCTTCTCTGGAAAGATCTGAGCCATTTTTGCATGTGGGCATATTCACTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR GCA 90 bp | AATCTCACTGGACCACATCCCACATATACCTTCTTCTTACGTGTACCTCAGACAGGCGTGGCTTCACTGTaGCTTCGCGTGGACTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: NLTGPHPTYTFFLRVPQTGVASL*LRVDFH Trigger: ATGAAAGTCCACGCGAAGGCACAGTGAAGCCACGCC...TGTCTGAGGTACACGTAAGAAGAAGGTATATGTGGGATGTGGTCCAGTGAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR CCA 90 bp | TACAGCGCCAGGAAAATGAGGGACGCTCCCACATGTTTTAGAGTAGCTTGCCTCTCTATGCCTTTGTTCTaGGCTATCTCACAGCTATCG | + |
|
Preference number: 2 (lower is better) Translates to: YSARKMRDAPTCFRVACLSMPLF*AISQLS Trigger: CGATAGCTGTGAGATAGCCCAGAACAAAGGCATAGA...GAGGCAAGCTACTCTAAAACATGTGGGAGCGTCCCTCATTTTCCTGGCGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGGAGGTTAGAACTGGCCCCCTGCAACTGGGTCACACAACAAATATTTCACTTAACACACCTTATCTaGTACCTGTCTGAAAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: VGRLELAPCNWVTQQIFHLTHLI*YLSEST Trigger: AGTGCTTTCAGACAGGTACCAGATAAGGTGTGTTAA...GTGAAATATTTGTTGTGTGACCCAGTTGCAGGGGGCCAGTTCTAACCTCCCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR CCA 90 bp | CACATCCCACATATACCTTCTTCTTACGTGTACCTCAGACATACACGTTCTCAACTGGTGGCCTGTTGCTaGGGTCTTCCTATTACAGGT | + |
|
Preference number: 2 (lower is better) Translates to: HIPHIPSSYVYLRHTRSQLVACC*GLPITG Trigger: ACCTGTAATAGGAAGACCCCAGCAACAGGCCACCAG...TTGAGAACGTGTATGTCTGAGGTACACGTAAGAAGAAGGTATATGTGGGATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR GCA 90 bp | CCATCCCGAAGCCACGAAGCTTATACCTTTACAGAAAATAAAGACTCAAGTCTAGCTCCAGGAAAGCTATaGCTTTGCCTCTTGGCTATA | + |
|
Preference number: 2 (lower is better) Translates to: PSRSHEAYTFTENKDSSLAPGKL*LCLLAI Trigger: TATAGCCAAGAGGCAAAGGCATAGCTTTCCTGGAGC...TAGACTTGAGTCTTTATTTTCTGTAAAGGTATAAGCTTCGTGGCTTCGGGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CAA 90 bp | CCTAAAACTAGGGCTTCTGGAATCGTAAATGTATTTAGCTCTAAGTaGGGGTTGAAATCTCACTGGACCACATCCCACATATACCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PKTRASGIVNVFSSK*GLKSHWTTSHIYLL Trigger: AAGAAGGTATATGTGGGATGTGGTCCAGTGAGATTTCAACCCCAACTTAGAGCTAAATACATTTACGATTCCAGAAGCCCTAGTTTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR GCA 90 bp | CACACTGGCATTAAGAAGAATATTACACATACAGAAACAACTTCAGCACTGCAGTTGAACGTAGCCATATaGGCTGAGTTTCCTATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: HTGIKKNITHTETTSALQLNVAI*AEFPML Trigger: CAACATAGGAAACTCAGCGCATATGGCTACGTTCAA...CTGCAGTGCTGAAGTTGTTTCTGTATGTGTAATATTCTTCTTAATGCCAGTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CAA 90 bp | TGGGTCACACAACAAATATTTCACCACAAACGAGTTAGCAAAATCTaGGTAAAACTGTCTGCTAAGCACTATGGGTATCGTATTGTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: WVTQQIFHHKRVSKI*VKLSAKHYGYRIVK Trigger: CTTAACAATACGATACCCATAGTGCTTAGCAGACAGTTTTACCAAGATTTTGCTAACTCGTTTGTGGTGAAATATTTGTTGTGTGACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CCA 72 bp | GGTACCGCTCAGCAGAACAGTTGGGTTCTCAGTGCCTaGCACCAGGGTAGCTGGTGGCCTGTTGCTGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GTAQQNSWVLSA*HQGSWWPVAGV Trigger: GACCCCAGCAACAGGCCACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAGCGGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR CAA 90 bp | GTACCGCTCAGCAGAACAGTTGGGTTCTCAGTGCCTGGCACCAGGGTAGCTGGTCTCAGGAAGATGAGATaGGGGGACCCTGGGGTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: VPLSRTVGFSVPGTRVAGLRKMR*GDPGVG Trigger: CCCGACCCCAGGGTCCCCCAATCTCATCTTCCTGAG...ACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAGCGGTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CCA 72 bp | CCTCCACTCCACCTCAAGCAGGGTGTCCGCTTGGCGTaGCTTCACTGTGCCTTCGCGTGGACTTTCATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PPLHLKQGVRLA*LHCAFAWTFIG Trigger: TCCTATGAAAGTCCACGCGAAGGCACAGTGAAGCCACGCCAAGCGGACACCCTGCTTGAGGTGGAGTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CCA 72 bp | AACCACCTCCACTCCACCTCAAGCAGGGTGTCCGCTTaGCGTGGCTTCACTGTGCCTTCGCGTGGACTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NHLHSTSSRVSA*RGFTVPSRGLS Trigger: TGAAAGTCCACGCGAAGGCACAGTGAAGCCACGCCAAGCGGACACCCTGCTTGAGGTGGAGTGGAGGTGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR GCA 72 bp | ACAGAGCTGCTCCGGAGCCTTCTGGAAATCTCTTCCTaGGGTCGCTCGCCAGCTCACTCAGTGTGTCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: TELLRSLLEISS*GRSPAHSVCHS Trigger: ACTGTGACACACTGAGTGAGCTGGCGAGCGACCGCAGGAAGAGATTTCCAGAAGGCTCCGGAGCAGCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CCA 72 bp | AGTTGGGTTCTCAGTGCCTGGCACCAGGGTAGCTGGTaGCCTGTTGCTGGGGTCTTCCTATTACAGGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SWVLSAWHQGSW*PVAGVFLLQVP Trigger: GGGAACCTGTAATAGGAAGACCCCAGCAACAGGCCACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CCA 72 bp | ATAAGCTTGAACCCCGGTACCGCTCAGCAGAACAGTTaGGTTCTCAGTGCCTGGCACCAGGGTAGCTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ISLNPGTAQQNS*VLSAWHQGSWW Trigger: CCACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAGCGGTACCGGGGTTCAAGCTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CCA 72 bp | GGTGTCCGCTTGGCGTGGCTTCACTGTGCCTTCGCGTaGACTTTCATAGGACATAAGCTTGAACCCCGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GVRLAWLHCAFA*TFIGHKLEPRY Trigger: GTACCGGGGTTCAAGCTTATGTCCTATGAAAGTCCACGCGAAGGCACAGTGAAGCCACGCCAAGCGGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CCA 72 bp | AACAGTTGGGTTCTCAGTGCCTGGCACCAGGGTAGCTaGTGGCCTGTTGCTGGGGTCTTCCTATTACAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: NSWVLSAWHQGS*WPVAGVFLLQV Trigger: AACCTGTAATAGGAAGACCCCAGCAACAGGCCACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CCA 72 bp | CAAACTAGCAAAACACAGAGCTGCTCCGGAGCCTTCTaGAAATCTCTTCCTGCGGTCGCTCGCCAGCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: QTSKTQSCSGAF*KSLPAVARQLT Trigger: AGTGAGCTGGCGAGCGACCGCAGGAAGAGATTTCCAGAAGGCTCCGGAGCAGCTCTGTGTTTTGCTAGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR CAA 90 bp | GTACCGCTCAGCAGAACAGTTGGGTTCTCAGTGCCTGGCACCAGGGTAGCTGGTCTATGCCTTTGCCTCTaGGCTATAGCTTTGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VPLSRTVGFSVPGTRVAGLCLCL*AIALPL Trigger: AAGAGGCAAAGCTATAGCCAAGAGGCAAAGGCATAG...ACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAGCGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR GCA 72 bp | TGGTACCTGTCTGAAAGCACTCCCTGGGCCTATCTATaGCTTTGTTCTGGGCTATCTCACAGCTATCGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: WYLSESTPWAYL*LCSGLSHSYRG Trigger: GCCCCGATAGCTGTGAGATAGCCCAGAACAAAGGCATAGATAGGCCCAGGGAGTGCTTTCAGACAGGTACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTCACGAGAGAAAGCACCTGAAGATGATGAGGGGCTACAGCGCCAGGAAAATGGGCCTATCTATGCCTTaGTTCTGGGCTATCTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PHERKHLKMMRGYSARKMGLSMP*FWAISQ Trigger: CTGTGAGATAGCCCAGAACAAAGGCATAGATAGGCC...CATTTTCCTGGCGCTGTAGCCCCTCATCATCTTCAGGTGCTTTCTCTCGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR GCA 72 bp | ACTGCAGACATCACACAAACTAGCAAAACACAGAGCTaGTCCGGAGCCTTCTGGAAATCTCTTCCTGCGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TADITQTSKTQS*SGAFWKSLPAV Trigger: GACCGCAGGAAGAGATTTCCAGAAGGCTCCGGAGCAGCTCTGTGTTTTGCTAGTTTGTGTGATGTCTGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CCA 72 bp | ACACACCTTATCTGGTACCTGTCTGAAAGCACTCCCTaGGCCTATCTATGCCTTTGTTCTGGGCTATCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: THLIWYLSESTP*AYLCLCSGLSH Trigger: GTGAGATAGCCCAGAACAAAGGCATAGATAGGCCCAGGGAGTGCTTTCAGACAGGTACCAGATAAGGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR-3UTR CAA 90 bp | CCATCCCGAAGCCACGAAGCTTATACCTTTACAGAAAATAAAGACTCAAGTCTAGTAGCTGGTGGCCTGTaGCTGGGGTCTTCCTATTAC | + |
|
Preference number: 3 (lower is better) Translates to: PSRSHEAYTFTENKDSSLVAGGL*LGSSYY Trigger: GTAATAGGAAGACCCCAGCAACAGGCCACCAGCTAC...TAGACTTGAGTCTTTATTTTCTGTAAAGGTATAAGCTTCGTGGCTTCGGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR TCA 72 bp | AGGCCTGGGTGGAAGATAAATAGCCATGTCCTGGCATaGAGTCTAACTCTGTGCAAACTTCTCAGCTATGTC | + |
|
Preference number: 3 (lower is better) Translates to: RPGWKINSHVLA*SLTLCKLLSYV Trigger: GACATAGCTGAGAAGTTTGCACAGAGTTAGACTTCATGCCAGGACATGGCTATTTATCTTCCACCCAGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR TCA 72 bp | CAGAAAATAAAGACTCAAGTCTATCCCCAGACTGACTaGACAGCATCAGCCGTGAGTGAGCTACACTTAACC | + |
|
Preference number: 3 (lower is better) Translates to: QKIKTQVYPQTD*TASAVSELHLT Trigger: GGTTAAGTGTAGCTCACTCACGGCTGATGCTGTTCAGTCAGTCTGGGGATAGACTTGAGTCTTTATTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR TCA 72 bp | AATGAAGCATTTTCACACTTTAAGGAATTATTCCAGTaGATATGCCCACATGCAAAAATGGCTCAGATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NEAFSHFKELFQ*ICPHAKMAQIF Trigger: AAAGATCTGAGCCATTTTTGCATGTGGGCATATTCACTGGAATAATTCCTTAAAGTGTGAAAATGCTTCATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR TCA 90 bp | CACCTCAAGCAGGGTGTCCGCTTGGCGTGGCTTCACTGTGCCTTCGCGTGGACTCATCGGGCAGGCTGCTaGCTTCGTCATCCGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLKQGVRLAWLHCAFAWTHRAGC*LRHPAD Trigger: GTCTGCCGGATGACGAAGTCAGCAGCCTGCCCGATG...AGTCCACGCGAAGGCACAGTGAAGCCACGCCAAGCGGACACCCTGCTTGAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR TCA 90 bp | CTCAGCAGAACAGTTGGGTTCTCAGTGCCTGGCACCAGGGTAGCTGGTGGCCTGACGTGTGGGAAGGGCTaGCAAGGGAAGCCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSRTVGFSVPGTRVAGGLTCGKG*QGKPAS Trigger: AGAGGCTGGCTTCCCTTGTCAGCCCTTCCCACACGT...CAGGCCACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR CCA 90 bp | GTACCGCTCAGCAGAACAGTTGGGTTCTCAGTGCCTGGCACCAGGGTAGCTGGTCACACCGTCCAGTTATaGGACACGGTGGTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPLSRTVGFSVPGTRVAGHTVQL*DTVVTE Trigger: CTCTGTCACCACCGTGTCCCATAACTGGACGGTGTG...ACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAGCGGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAAAAAGGACTCCATGCATCCCCACCTAGGCATGAAGAACCTGCCACAGCTCCAGCCTCTTGGGAGTaGGCAACAGCTCAGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQKGLHASPPRHEEPATAPASWE*ATAQWG Trigger: ACCCCACTGAGCTGTTGCTCACTCCCAAGAGGCTGG...AGCTGTGGCAGGTTCTTCATGCCTAGGTGGGGATGCATGGAGTCCTTTTTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGCAGAACAGTTGGGTTCTCAGTGCCTGGCACCAGGGTAGCTGGTGGCCTGAGAGTCGAAACTGGCTaGCCTGTAGAATTCTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSRTVGFSVPGTRVAGGLRVETG*PVEFYH Trigger: GTGGTAGAATTCTACAGGCCAGCCAGTTTCGACTCT...CAGGCCACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR CCA 90 bp | CACTGTGCCTTCGCGTGGACTTTCATAGGACATAAGCTTGAACCCCGGTACCGCCAATTAGAGGACGTGTaGGAAGGGCTGACAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HCAFAWTFIGHKLEPRYRQLEDV*EGLTRE Trigger: TTCCCTTGTCAGCCCTTCCCACACGTCCTCTAATTG...GCGGTACCGGGGTTCAAGCTTATGTCCTATGAAAGTCCACGCGAAGGCACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR TCA 90 bp | CCTCACGAGAGAAAGCACCTGAAGATGATGAGGGGCTACAGCGCCAGGAAAATGCTAAGGGCAAGGAGCTaGAGTACAGCAAACCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHERKHLKMMRGYSARKMLRARS*STANLA Trigger: TGCTAGGTTTGCTGTACTTCAGCTCCTTGCCCTTAG...CATTTTCCTGGCGCTGTAGCCCCTCATCATCTTCAGGTGCTTTCTCTCGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR CCA 90 bp | CCCACAGCAGTGCAGGACTCAGCAAAGTCAGCCCTGCCCAAACTTCTAAGACAAAACACTCCAGAACCTTaGGCTTCCTCTGCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTAVQDSAKSALPKLLRQNTPEP*ASSASG Trigger: ACCTGAAGCAGAGGAAGCCCAAGGTTCTGGAGTGTT...TTGTCTTAGAAGTTTGGGCAGGGCTGACTTTGCTGAGTCCTGCACTGCTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGGTCTTCCTATTACAGGTTCCCCACAGCAGTGCAGGACTCAGCAAAGTACACTAACACCCGGATaGACGTCTGAAAGAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CWGLPITGSPQQCRTQQSTLTPG*TSERAR Trigger: CCTTGCTCTTTCAGACGTCCATCCGGGTGTTAGTGT...ACTTTGCTGAGTCCTGCACTGCTGTGGGGAACCTGTAATAGGAAGACCCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR TCA 90 bp | CACATCCCACATATACCTTCTTCTTACGTGTACCTCAGACATACACGTTCTCAACCACGGGGGTGGAGCTaGGTGATGGAGAGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIPHIPSSYVYLRHTRSQPRGWS*VMESSL Trigger: GAGAGAGCTCTCCATCACTCAGCTCCACCCCCGTGG...TTGAGAACGTGTATGTCTGAGGTACACGTAAGAAGAAGGTATATGTGGGATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGGTCTTCCTATTACAGGTTCCCCACAGCAGTGCAGGACTCAGCAAAGTAGTCCCCAAAGTCTATaGTCTTGTAGAGGCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CWGLPITGSPQQCRTQQSSPQSL*SCRGIW Trigger: CCAAATGCCTCTACAAGATCATAGACTTTGGGGACT...ACTTTGCTGAGTCCTGCACTGCTGTGGGGAACCTGTAATAGGAAGACCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR TCA 90 bp | GTACCGCTCAGCAGAACAGTTGGGTTCTCAGTGCCTGGCACCAGGGTAGCTGGTCAGTCTAGAAATTCATaGCAAACGCATTGGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VPLSRTVGFSVPGTRVAGQSRNS*QTHWQK Trigger: TTTTTGCCAATGCGTTTGTCATGAATTTCTAGACTG...ACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAGCGGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGAATATGCCCACATGCAAAAATGGCTCAGATCTTTCCAGAGAAGCCTGTCTTGTAGAGGCATTTaGCGCAGACCCTGTGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSEYAHMQKWLRSFQRSLSCRGI*RRPCDN Trigger: GTTGTCACAGGGTCTGCGCCAAATGCCTCTACAAGA...CAGGCTTCTCTGGAAAGATCTGAGCCATTTTTGCATGTGGGCATATTCACTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR GCA 90 bp | CACATCCCACATATACCTTCTTCTTACGTGTACCTCAGACATACACGTTCTCAAGAAAGAGCAAGGAGGTaGAGTTCCACACCGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HIPHIPSSYVYLRHTRSQERARR*SSTPSS Trigger: ACTGGACGGTGTGGAACTGCACCTCCTTGCTCTTTC...TTGAGAACGTGTATGTCTGAGGTACACGTAAGAAGAAGGTATATGTGGGATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR GCA 90 bp | CACACTGGCATTAAGAAGAATATTACACATACAGAAACAACTTCAGCACTGCAGGGAGAGCTCTCTCTCTaGACCTCCATGATGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: HTGIKKNITHTETTSALQGELSL*TSMMVI Trigger: TATCACCATCATGGAGGTGCAGAGAGAGAGCTCTCC...CTGCAGTGCTGAAGTTGTTTCTGTATGTGTAATATTCTTCTTAATGCCAGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CAA 72 bp | AGGGCTTCTGGAATCGTAAATGTATTTAGCTCTAAGTaGGGGTTGAAATCTCACTGGACCACATCCCACATA | + |
|
Preference number: 4 (lower is better) Translates to: RASGIVNVFSSK*GLKSHWTTSHI Trigger: TATGTGGGATGTGGTCCAGTGAGATTTCAACCCCAACTTAGAGCTAAATACATTTACGATTCCAGAAGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CAA 72 bp | GGAATACAAAAGAAAGCAGAATCATACATACATCATTaGAACGTAGCCATATGCGCTGAGTTTCCTATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GIQKKAESYIHH*NVAICAEFPML Trigger: CAACATAGGAAACTCAGCGCATATGGCTACGTTCAAATGATGTATGTATGATTCTGCTTTCTTTTGTATTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| 3UTR CAA 72 bp | CAACAAATATTTCACCACAAACGAGTTAGCAAAATCTaGGTAAAACTGTCTGCTAAGCACTATGGGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: QQIFHHKRVSKI*VKLSAKHYGYR Trigger: ACGATACCCATAGTGCTTAGCAGACAGTTTTACCAAGATTTTGCTAACTCGTTTGTGGTGAAATATTTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CCA 90 bp | CTCTGCACCTCCATGATGGTGATAACCAAGCAATTAGAGGACGTGTaGGAAGGGCTGACAAGGGAAGCCAGCCTCTTGGGAGTGAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LCTSMMVITKQLEDV*EGLTREASLLGVSN Trigger: GTTGCTCACTCCCAAGAGGCTGGCTTCCCTTGTCAGCCCTTCCCACACGTCCTCTAATTGCTTGGTTATCACCATCATGGAGGTGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS TCA 90 bp | CACAGGTCAAGTTTACAAGGATGTTGTTGTCATCGGGCAGGCTGCTaGCTTCGTCATCCGGCAGACAGGTCTCAAACCTGCAGAAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRSSLQGCCCHRAGC*LRHPADRSQTCRRD Trigger: GTCCCTTCTGCAGGTTTGAGACCTGTCTGCCGGATGACGAAGTCAGCAGCCTGCCCGATGACAACAACATCCTTGTAAACTTGACCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS TCA 90 bp | GAAACTGGCTGGCCTGTAGAATTCTACCACGGGGGTGGAGCTGAGTaGTGGAGAGCTCTCTCTCTGCACCTCCATGATGGTGATAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: ETGWPVEFYHGGGAE*WRALSLHLHDGDNQ Trigger: TTGGTTATCACCATCATGGAGGTGCAGAGAGAGAGCTCTCCATCACTCAGCTCCACCCCCGTGGTAGAATTCTACAGGCCAGCCAGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS GCA 90 bp | AATTCTACCACGGGGGTGGAGCTGAGTGATGGAGAGCTCTCTCTCTaGACCTCCATGATGGTGATAACCAAGCAATTAGAGGACGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSTTGVELSDGELSL*TSMMVITKQLEDVW Trigger: CCACACGTCCTCTAATTGCTTGGTTATCACCATCATGGAGGTGCAGAGAGAGAGCTCTCCATCACTCAGCTCCACCCCCGTGGTAGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR CAA 90 bp | TACAGCGCCAGGAAAATGAGGGACGCTCCCACATGTTTTAGAGTAGCTTGCCTCTTTACAAGGATGTTGTaGTCATCGGGCAGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSARKMRDAPTCFRVACLFTRML*SSGRLL Trigger: CAGCAGCCTGCCCGATGACAACAACATCCTTGTAAA...GAGGCAAGCTACTCTAAAACATGTGGGAGCGTCCCTCATTTTCCTGGCGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR CAA 90 bp | GTACCGCTCAGCAGAACAGTTGGGTTCTCAGTGCCTGGCACCAGGGTAGCTGGTTTCATGACAAACGCATaGGCAAAAACCATACACCAT | + |
|
Preference number: 5 (lower is better) Translates to: VPLSRTVGFSVPGTRVAGFMTNA*AKTIHH Trigger: ATGGTGTATGGTTTTTGCCAATGCGTTTGTCATGAA...ACCAGCTACCCTGGTGCCAGGCACTGAGAACCCAACTGTTCTGCTGAGCGGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CCA 90 bp | TGTAGAGGCATTTGGCGCAGACCCTGTGACAACACTCCAGAACCTTaGGCTTCCTCTGCTTCAGGTTGTACCGATTGTAACAGATCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: CRGIWRRPCDNTPEP*ASSASGCTDCNRSY Trigger: GTAAGATCTGTTACAATCGGTACAACCTGAAGCAGAGGAAGCCCAAGGTTCTGGAGTGTTGTCACAGGGTCTGCGCCAAATGCCTCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR CAA 90 bp | CACACTGGCATTAAGAAGAATATTACACATACAGAAACAACTTCAGCACTGCAGCAACACTCCAGAACCTaGGGCTTCCTCTGCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HTGIKKNITHTETTSALQQHSRT*GFLCFR Trigger: CCTGAAGCAGAGGAAGCCCAAGGTTCTGGAGTGTTG...CTGCAGTGCTGAAGTTGTTTCTGTATGTGTAATATTCTTCTTAATGCCAGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS-3UTR CAA 90 bp | CACATCCCACATATACCTTCTTCTTACGTGTACCTCAGACATACACGTTCTCAAAAGTTTACAAGGATGTaGTTGTCATCGGGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HIPHIPSSYVYLRHTRSQKFTRM*LSSGRL Trigger: CAGCCTGCCCGATGACAACAACATCCTTGTAAACTT...TTGAGAACGTGTATGTCTGAGGTACACGTAAGAAGAAGGTATATGTGGGATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CAA 72 bp | GACGTGTGGGAAGGGCTGACAAGGGAAGCCAGCCTCTaGGGAGTGAGCAACAGCTCAGTGGGGTTCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: DVWEGLTREASL*GVSNSSVGFSG Trigger: GCCTGAGAACCCCACTGAGCTGTTGCTCACTCCCAAGAGGCTGGCTTCCCTTGTCAGCCCTTCCCACACGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CCA 72 bp | GTTATGGGACACGGTGGTGACAGAGTCGAAACTGGCTaGCCTGTAGAATTCTACCACGGGGGTGGAGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VMGHGGDRVETG*PVEFYHGGGAE Trigger: CTCAGCTCCACCCCCGTGGTAGAATTCTACAGGCCAGCCAGTTTCGACTCTGTCACCACCGTGTCCCATAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CAA 72 bp | CCTTTGCCCCCACAGGTCAAGTTTACAAGGATGTTGTaGTCATCGGGCAGGCTGCTGACTTCGTCATCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLPPQVKFTRML*SSGRLLTSSSG Trigger: GCCGGATGACGAAGTCAGCAGCCTGCCCGATGACAACAACATCCTTGTAAACTTGACCTGTGGGGGCAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CAA 90 bp | CATTTCTTCCCTTTGCCCCCACAGGTCAAGTTTACAAGGATGTTGTaGTCATCGGGCAGGCTGCTGACTTCGTCATCCGGCAGACAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HFFPLPPQVKFTRML*SSGRLLTSSSGRQV Trigger: GACCTGTCTGCCGGATGACGAAGTCAGCAGCCTGCCCGATGACAACAACATCCTTGTAAACTTGACCTGTGGGGGCAAAGGGAAGAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CAA 90 bp | AGGCATTTCTTCCCTTTGCCCCCACAGGTCAAGTTTACAAGGATGTaGTTGTCATCGGGCAGGCTGCTGACTTCGTCATCCGGCAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: RHFFPLPPQVKFTRM*LSSGRLLTSSSGRQ Trigger: CTGTCTGCCGGATGACGAAGTCAGCAGCCTGCCCGATGACAACAACATCCTTGTAAACTTGACCTGTGGGGGCAAAGGGAAGAAATGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CAA 90 bp | GTGAGCAACAGCTCAGTGGGGTTCTCAGGCAGGCATTTCTTCCCTTaGCCCCCACAGGTCAAGTTTACAAGGATGTTGTTGTCATCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSNSSVGFSGRHFFP*PPQVKFTRMLLSSG Trigger: GCCCGATGACAACAACATCCTTGTAAACTTGACCTGTGGGGGCAAAGGGAAGAAATGCCTGCCTGAGAACCCCACTGAGCTGTTGCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS TCA 72 bp | AGTTTACAAGGATGTTGTTGTCATCGGGCAGGCTGCTaGCTTCGTCATCCGGCAGACAGGTCTCAAACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLQGCCCHRAGC*LRHPADRSQTC Trigger: GCAGGTTTGAGACCTGTCTGCCGGATGACGAAGTCAGCAGCCTGCCCGATGACAACAACATCCTTGTAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS GCA 72 bp | ACGGGGGTGGAGCTGAGTGATGGAGAGCTCTCTCTCTaGACCTCCATGATGGTGATAACCAAGCAATTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TGVELSDGELSL*TSMMVITKQLE Trigger: CTCTAATTGCTTGGTTATCACCATCATGGAGGTGCAGAGAGAGAGCTCTCCATCACTCAGCTCCACCCCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CCA 72 bp | TCCATGATGGTGATAACCAAGCAATTAGAGGACGTGTaGGAAGGGCTGACAAGGGAAGCCAGCCTCTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SMMVITKQLEDV*EGLTREASLLG Trigger: TCCCAAGAGGCTGGCTTCCCTTGTCAGCCCTTCCCACACGTCCTCTAATTGCTTGGTTATCACCATCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CAA 72 bp | TTCCCTTTGCCCCCACAGGTCAAGTTTACAAGGATGTaGTTGTCATCGGGCAGGCTGCTGACTTCGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: FPLPPQVKFTRM*LSSGRLLTSSS Trigger: GGATGACGAAGTCAGCAGCCTGCCCGATGACAACAACATCCTTGTAAACTTGACCTGTGGGGGCAAAGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CCA 72 bp | ATTTGGCGCAGACCCTGTGACAACACTCCAGAACCTTaGGCTTCCTCTGCTTCAGGTTGTACCGATTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: IWRRPCDNTPEP*ASSASGCTDCN Trigger: GTTACAATCGGTACAACCTGAAGCAGAGGAAGCCCAAGGTTCTGGAGTGTTGTCACAGGGTCTGCGCCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||
| CDS CAA 72 bp | AGCTCAGTGGGGTTCTCAGGCAGGCATTTCTTCCCTTaGCCCCCACAGGTCAAGTTTACAAGGATGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSVGFSGRHFFP*PPQVKFTRMLL Trigger: CAACAACATCCTTGTAAACTTGACCTGTGGGGGCAAAGGGAAGAAATGCCTGCCTGAGAACCCCACTGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059986.3 |
||