Pregenerated sensors for RNF181 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055850Ensembl transcript IDs: ENSMUST00000069580.12, ENSMUST00000069595.13, ENSMUST00000114095.2, ENSMUST00000125554.8, ENSMUST00000126065.8, ENSMUST00000129233.8, ENSMUST00000130064.8, ENSMUST00000149296.8, ENSMUST00000151063.2, ENSMUST00000154098.3
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGCCCTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTaGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCT | + |
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Preference number: 1 (lower is better) Translates to: QALVVLGPHHPESRG*QRELQPGTFGHLTP Trigger: AGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAGGGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000154098.3 |
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| 3UTR GCA 90 bp | GAGGATTCGGAAGGAGCCCCTGCTTCGGCTGGTGAGCCGTGCAGCTaGAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGTGCAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: EDSEGAPASAGEPCS*RVGKETFNDSECRG Trigger: CCCTCTGCACTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGCCGAAGCAGGGGCTCCTTCCGAATCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR GCA 90 bp | AGGGTGGAGGATTCGGAAGGAGCCCCTGCTTCGGCTGGTGAGCCGTaGAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: RVEDSEGAPASAGEP*SCRVGKETFNDSEC Trigger: GCACTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGCCGAAGCAGGGGCTCCTTCCGAATCCTCCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR CCA 90 bp | TTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTaGCTAGCAGCAGGGTGGAGGATTCGGAAGGAGCCCCTGCTTCGG | + |
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Preference number: 1 (lower is better) Translates to: LQPGTFGHLTPLTSF*LAAGWRIRKEPLLR Trigger: CCGAAGCAGGGGCTCCTTCCGAATCCTCCACCCTGCTGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR TCA 90 bp | TTATCAGTTTTAAACAGCTACAAAGCGCCAGGCTCTGACACAGTTTaGCTTCTAAAAGAACACTCAGACCCAAGCCCTGGTTGTTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: LSVLNSYKAPGSDTV*LLKEHSDPSPGCSR Trigger: CCTAGAACAACCAGGGCTTGGGTCTGAGTGTTCTTTTAGAAGTCAAACTGTGTCAGAGCCTGGCGCTTTGTAGCTGTTTAAAACTGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000154098.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTTTCTCCAGGCGGTGCTaGTGCTGCTGCCTGCGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: VLGPHHPESRGWQRELQPFSRRC*CCCLRA Trigger: GGCTCGCAGGCAGCAGCAGCAGCACCGCCTGGAGAA...AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTAGGCGGTGCTGCTGCTaGTGCCTGCGAGCCTTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VLGPHHPESRGWQRELQPRRCCC*CLRALS Trigger: AGACAAGGCTCGCAGGCAGCAGCAGCAGCACCGCCT...AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTGCTGGCAGAGGGAATTaGAGCCTGGCACCTTCGGAC | + |
|
Preference number: 2 (lower is better) Translates to: VLGPHHPESRGWQRELQPAGRGN*SLAPSD Trigger: GTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGC...AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCCCAGAGTCTAGAGGCTaGCAGAGGGAATTGCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LGPHHPESRGWQRELQPGPESRG*QRELQP Trigger: AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGG...GCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR-3UTR CCA 90 bp | GTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTCACAGCCTTGGCAGCTaGTGGGGGAAGGTGGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: VLGPHHPESRGWQRELQPHSLGS*WGKVVF Trigger: GAACACCACCTTCCCCCACCAGCTGCCAAGGCTGTG...AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129233.8 ENSMUST00000149296.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATTCTCCAGGCGGTGCTaGTGCTGCTGCCTGCGAGCC | + |
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Preference number: 2 (lower is better) Translates to: GWQRELQPGTFGHLTPLTFSRRC*CCCLRA Trigger: GGCTCGCAGGCAGCAGCAGCAGCACCGCCTGGAGAA...TGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGTCTCCACCACAGCCTTaGCAGCTGGTGGGGGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: VVLGPHHPESRGWQRELQSPPQP*QLVGEG Trigger: ACCTTCCCCCACCAGCTGCCAAGGCTGTGGTGGAGA...CTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129233.8 ENSMUST00000149296.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTTGCCCTACTTGGGCTGGCTTGACCTTTGATTCCTTGATAATGGCGCCTTTCTCCAGGCGGTGCTaGTGCTGCTGCCTGCGAGCC | + |
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Preference number: 2 (lower is better) Translates to: QPCPTWAGLTFDSLIMAPFSRRC*CCCLRA Trigger: GGCTCGCAGGCAGCAGCAGCAGCACCGCCTGGAGAA...AGGCGCCATTATCAAGGAATCAAAGGTCAAGCCAGCCCAAGTAGGGCAAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125554.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGAAGGTATCAGAGAGGCTGAGCGCTCAGCCCTGGCAGCTGCCTCACGTGCCTTTGACATCTTTCTaGCTAGCAGCAGGGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RGKVSERLSAQPWQLPHVPLTSF*LAAGWR Trigger: CCTCCACCCTGCTGCTAGCCAGAAAGATGTCAAAGG...CACGTGAGGCAGCTGCCAGGGCTGAGCGCTCAGCCTCTCTGATACCTTCCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACACGGTGCTGCTGCTGCTaGCTGCGAGCCTTGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: GWQRELQPGTFGHLTPLTRCCCC*LRALSF Trigger: GAAAGACAAGGCTCGCAGGCAGCAGCAGCAGCACCG...TGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCCGTGCAGCTGCAGGGTaGGTAAAGAAACCTTTAATG | + |
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Preference number: 2 (lower is better) Translates to: LGPHHPESRGWQRELQPGRAAAG*VKKPLM Trigger: CATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACG...GCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR-3UTR CCA 90 bp | GTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTCCTTTGACATCTTTCTaGCTAGCAGCAGGGTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VLGPHHPESRGWQRELQPPLTSF*LAAGWR Trigger: CCTCCACCCTGCTGCTAGCCAGAAAGATGTCAAAGG...AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTTGCCCTACTTGGGCTGGCTTGACCTTTGATTCCTTGATAATGGCGCCTCTGAGCGCTCAGCCCTaGCAGCTGCCTCACGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: QPCPTWAGLTFDSLIMAPLSAQP*QLPHVY Trigger: GTACACGTGAGGCAGCTGCCAGGGCTGAGCGCTCAG...AGGCGCCATTATCAAGGAATCAAAGGTCAAGCCAGCCCAAGTAGGGCAAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125554.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACAGGTGAGCCGTGCAGCTaGAGGGTGGGTAAAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: GWQRELQPGTFGHLTPLTGEPCS*RVGKET Trigger: GGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACC...TGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR-3UTR GCA 90 bp | CTAAAAGAACACTCAGACCCAAGCCCTGGTTGTTCTAGGGCCCCACCACCCAGAGGTGAGCCGTGCAGCTaGAGGGTGGGTAAAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: LKEHSDPSPGCSRAPPPRGEPCS*RVGKET Trigger: GGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACC...TCTGGGTGGTGGGGCCCTAGAACAACCAGGGCTTGGGTCTGAGTGTTCTTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000154098.3 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTTGCCCTACTTGGGCTGGCTTGACCTTTGATTCCTTGATAATGGCGCCTGCTGGCAGAGGGAATTaGAGCCTGGCACCTTCGGAC | + |
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Preference number: 2 (lower is better) Translates to: QPCPTWAGLTFDSLIMAPAGRGN*SLAPSD Trigger: GTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGC...AGGCGCCATTATCAAGGAATCAAAGGTCAAGCCAGCCCAAGTAGGGCAAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGGTATCAGAGAGGCTGAGCGCTCAGCCCTGGCAGCTGCCTCACGTGTACCGTGCAGCTGCAGGGTaGGTAAAGAAACCTTTAATG | + |
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Preference number: 2 (lower is better) Translates to: GKVSERLSAQPWQLPHVYRAAAG*VKKPLM Trigger: CATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACG...GTACACGTGAGGCAGCTGCCAGGGCTGAGCGCTCAGCCTCTCTGATACCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCCTTTGACATCTTTCTaGCTAGCAGCAGGGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LVVLGPHHPESRGWQRELPLTSF*LAAGWR Trigger: CCTCCACCCTGCTGCTAGCCAGAAAGATGTCAAAGG...CAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR-3UTR CCA 90 bp | AACACTCAGACCCAAGCCCTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAAGCTGTCATCATCAGTaGGCAGCTCATGGCGGCACA | + |
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Preference number: 2 (lower is better) Translates to: NTQTQALVVLGPHHPESRSCHHQ*AAHGGT Trigger: TGTGCCGCCATGAGCTGCCCACTGATGATGACAGCT...TCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAGGGCTTGGGTCTGAGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 |
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| 3UTR CAA 90 bp | GTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATaGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VLGPHHPESRGWQRE*QPGTFGHLTPLTSF Trigger: GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR-3UTR GCA 90 bp | CTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCTCCGGAGTGGGGTGGTaGAAGTTAATTTATCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LGPHHPESRGWQRELQPGSGVGW*KLIYQF Trigger: AAACTGATAAATTAACTTGCACCACCCCACTCCGGA...GCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000130064.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGAGGCGGTGCTGCTGCTaGTGCCTGCGAGCCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RELQPGTFGHLTPLTSFWRRCCC*CLRALS Trigger: AGACAAGGCTCGCAGGCAGCAGCAGCAGCACCGCCT...CCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGCAGGCGGTGCTGCTGCTaGTGCCTGCGAGCCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: IAAWHLRTFDTFDIFLASRRCCC*CLRALS Trigger: AGACAAGGCTCGCAGGCAGCAGCAGCAGCACCGCCT...GCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACACCAGAGTCTAGAGGCTaGCAGAGGGAATTGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GWQRELQPGTFGHLTPLTPESRG*QRELQP Trigger: AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGG...TGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTGCTGCCTGCGAGCCTTGTCTTTCTTGTGCTCTTCATAGCTGTCATCATCACAGCCTTGGCAGCTaGTGGGGGAAGGTGGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: AAAACEPCLSCALHSCHHHSLGS*WGKVVF Trigger: GAACACCACCTTCCCCCACCAGCTGCCAAGGCTGTG...ATGATGACAGCTATGAAGAGCACAAGAAAGACAAGGCTCGCAGGCAGCAGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129233.8 ENSMUST00000149296.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACAAGCTGTCATCATCAGTaGGCAGCTCATGGCGGCACA | + |
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Preference number: 2 (lower is better) Translates to: GWQRELQPGTFGHLTPLTSCHHQ*AAHGGT Trigger: TGTGCCGCCATGAGCTGCCCACTGATGATGACAGCT...TGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
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| 3UTR CAA 90 bp | TGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTaGACATCTTTCTGGCTAGCAGCAGGGTGGAGGATTCGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: WQRELQPGTFGHLTP*TSFWLAAGWRIRKE Trigger: CTCCTTCCGAATCCTCCACCCTGCTGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTGCTGGCAGAGGGAATTaGAGCCTGGCACCTTCGGAC | + |
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Preference number: 2 (lower is better) Translates to: AEGIAAWHLRTFDTFDIFAGRGN*SLAPSD Trigger: GTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGC...AAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR-3UTR GCA 90 bp | AGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGGCTGGCAGAGGGAATTaGAGCCTGGCACCTTCGGAC | + |
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Preference number: 2 (lower is better) Translates to: RELQPGTFGHLTPLTSFWAGRGN*SLAPSD Trigger: GTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGC...CCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCCGGTGCTGCTGCTGCTaGCTGCGAGCCTTGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: QRELQPGTFGHLTPLTSFRCCCC*LRALSF Trigger: GAAAGACAAGGCTCGCAGGCAGCAGCAGCAGCACCG...GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCCTCAGCCCTGGCAGCTaGCTCACGTGTACATGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: QRELQPGTFGHLTPLTSFLSPGS*LTCTWL Trigger: GAGCCATGTACACGTGAGGCAGCTGCCAGGGCTGAG...GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGTTCTCCACCACAGCCTTaGCAGCTGGTGGGGGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LVSRAAAGWVKKPLMIQSSPPQP*QLVGEG Trigger: ACCTTCCCCCACCAGCTGCCAAGGCTGTGGTGGAGA...ACTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129233.8 ENSMUST00000149296.8 |
||
| 3UTR CAA 90 bp | TCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTaGACACCTTTGACATCTTTCTGGCTAGCAGCAGGGTGGAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: SRGWQRELQPGTFGH*TPLTSFWLAAGWRI Trigger: AATCCTCCACCCTGCTGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR GCA 90 bp | GCCCTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTTAATGATTCAGAGTaGAGAGGGAAGGTATCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: ALVVLGPHHPESRGWQREFNDSE*RGKVSE Trigger: CTCTGATACCTTCCCTCTGCACTCTGAATCATTAAA...TTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGTGGTGAGCCGTGCAGCTaGAGGGTGGGTAAAGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: LVSRAAAGWVKKPLMIQSGEPCS*RVGKET Trigger: GGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACC...ACTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGGGTGAGCCGTGCAGCTaGAGGGTGGGTAAAGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: RELQPGTFGHLTPLTSFWGEPCS*RVGKET Trigger: GGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACC...CCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR GCA 90 bp | GAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGCTGGCAGAGGGAATTaGAGCCTGGCACCTTCGGAC | + |
|
Preference number: 2 (lower is better) Translates to: ELQPGTFGHLTPLTSFWLAGRGN*SLAPSD Trigger: GTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGC...TAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGGCTGCTGCTGCTGCCTaGGAGCCTTGTCTTTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: AGEPCSCRVGKETFNDSEAAAAA*EPCLSC Trigger: ACAAGAAAGACAAGGCTCGCAGGCAGCAGCAGCAGC...CTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTAAAGAAACCTTTAATGATTCAGAGTGCAGAGGGAAGGTATCAGAGAGGCTGTTCTCCAGGCGGTGCTaGTGCTGCTGCCTGCGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GKETFNDSECRGKVSERLFSRRC*CCCLRA Trigger: GGCTCGCAGGCAGCAGCAGCAGCACCGCCTGGAGAA...CAGCCTCTCTGATACCTTCCCTCTGCACTCTGAATCATTAAAGGTTTCTTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGCCAGAGTCTAGAGGCTaGCAGAGGGAATTGCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: AGEPCSCRVGKETFNDSEPESRG*QRELQP Trigger: AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGG...CTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATGGCGCCTACAGGAGTaGGATACAGAGAGCAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: GWQRELQPGTFGHLTPLTWRLQE*DTESNF Trigger: AAAGTTGCTCTCTGTATCCCACTCCTGTAGGCGCCA...TGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000130064.8 |
||
| 3UTR-3UTR GCA 90 bp | GAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGGTGAGCCGTGCAGCTaGAGGGTGGGTAAAGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: ELQPGTFGHLTPLTSFWLGEPCS*RVGKET Trigger: GGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACC...TAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR GCA 90 bp | TTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGCAGCTGCTGCTGCTGCCTaGGAGCCTTGTCTTTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LQPGTFGHLTPLTSFWLAAAAAA*EPCLSC Trigger: ACAAGAAAGACAAGGCTCGCAGGCAGCAGCAGCAGC...TGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGTTTAATGATTCAGAGTaGAGAGGGAAGGTATCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LVVLGPHHPESRGWQRELFNDSE*RGKVSE Trigger: CTCTGATACCTTCCCTCTGCACTCTGAATCATTAAA...CAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGCACCTTTGACATCTTTCTaGCTAGCAGCAGGGTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LQPGTFGHLTPLTSFWLAPLTSF*LAAGWR Trigger: CCTCCACCCTGCTGCTAGCCAGAAAGATGTCAAAGG...TGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGTCCTTTGACATCTTTCTaGCTAGCAGCAGGGTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LVSRAAAGWVKKPLMIQSPLTSF*LAAGWR Trigger: CCTCCACCCTGCTGCTAGCCAGAAAGATGTCAAAGG...ACTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR TCA 90 bp | GGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACAGGCTCTGACACAGTTTaGCTTCTAAAAGAACACTCA | + |
|
Preference number: 2 (lower is better) Translates to: GWQRELQPGTFGHLTPLTGSDTV*LLKEHS Trigger: TGAGTGTTCTTTTAGAAGTCAAACTGTGTCAGAGCC...TGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000154098.3 |
||
| 3UTR-3UTR GCA 90 bp | AAAGAACACTCAGACCCAAGCCCTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTTTAATGATTCAGAGTaGAGAGGGAAGGTATCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KEHSDPSPGCSRAPPPRVFNDSE*RGKVSE Trigger: CTCTGATACCTTCCCTCTGCACTCTGAATCATTAAA...GACTCTGGGTGGTGGGGCCCTAGAACAACCAGGGCTTGGGTCTGAGTGTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000154098.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTAAAGAAACCTTTAATGATTCAGAGTGCAGAGGGAAGGTATCAGAGAGGCTGGGTGAGCCGTGCAGCTaGAGGGTGGGTAAAGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: GKETFNDSECRGKVSERLGEPCS*RVGKET Trigger: GGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACC...CAGCCTCTCTGATACCTTCCCTCTGCACTCTGAATCATTAAAGGTTTCTTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGCGTGCAGCTGCAGGGTaGGTAAAGAAACCTTTAATG | + |
|
Preference number: 2 (lower is better) Translates to: AGEPCSCRVGKETFNDSERAAAG*VKKPLM Trigger: CATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACG...CTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTTAATGATTCAGAGTaGAGAGGGAAGGTATCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SRGWQRELQPGTFGHLTPFNDSE*RGKVSE Trigger: CTCTGATACCTTCCCTCTGCACTCTGAATCATTAAA...AGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCCGTGCAGCTGCAGGGTaGGTAAAGAAACCTTTAATG | + |
|
Preference number: 2 (lower is better) Translates to: QRELQPGTFGHLTPLTSFRAAAG*VKKPLM Trigger: CATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACG...GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CCA 90 bp | GAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTATGGCGCCTACAGGAGTaGGATACAGAGAGCAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: ELQPGTFGHLTPLTSFWLWRLQE*DTESNF Trigger: AAAGTTGCTCTCTGTATCCCACTCCTGTAGGCGCCA...TAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000130064.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTATGTGGAAATAAAGAACACCCCCAGGATTCCACGGTTAACTAAAGGTTCCCCAGAGTCTAGAGGCTaGCAGAGGGAATTGCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: FYVEIKNTPRIPRLTKGSPESRG*QRELQP Trigger: AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGG...GGAACCTTTAGTTAACCGTGGAATCCTGGGGGTGTTCTTTATTTCCACATAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000130064.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTGGCTCTGACACAGTTTaGCTTCTAAAAGAACACTCA | + |
|
Preference number: 2 (lower is better) Translates to: AEGIAAWHLRTFDTFDIFGSDTV*LLKEHS Trigger: TGAGTGTTCTTTTAGAAGTCAAACTGTGTCAGAGCC...AAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCAAAACTTCCACAAGGACTGTCCCCCTTTGAAGAGTCTCTAAACAGCCTTCGTGCAGCTGCAGGGTaGGTAAAGAAACCTTTAATG | + |
|
Preference number: 2 (lower is better) Translates to: LSKLPQGLSPFEESLNSLRAAAG*VKKPLM Trigger: CATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACG...AAGGCTGTTTAGAGACTCTTCAAAGGGGGACAGTCCTTGTGGAAGTTTTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTTGCCAGAAACTAAGAGTGACAGATGCCATTCAGATACATCGTAAGGGTGTGTCCGGAGTGGGGTGGTaGAAGTTAATTTATCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: GCQKLRVTDAIQIHRKGVSGVGW*KLIYQF Trigger: AAACTGATAAATTAACTTGCACCACCCCACTCCGGA...CACACCCTTACGATGTATCTGAATGGCATCTGTCACTCTTAGTTTCTGGCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 |
||
| 3UTR-3UTR TCA 90 bp | GGTAAAGAAACCTTTAATGATTCAGAGTGCAGAGGGAAGGTATCAGAGAGGCTGGGCTCTGACACAGTTTaGCTTCTAAAAGAACACTCA | + |
|
Preference number: 2 (lower is better) Translates to: GKETFNDSECRGKVSERLGSDTV*LLKEHS Trigger: TGAGTGTTCTTTTAGAAGTCAAACTGTGTCAGAGCC...CAGCCTCTCTGATACCTTCCCTCTGCACTCTGAATCATTAAAGGTTTCTTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000154098.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTTGCCAGAAACTAAGAGTGACAGATGCCATTCAGATACATCGTAAGGGTGTGTTTAATGATTCAGAGTaGAGAGGGAAGGTATCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GCQKLRVTDAIQIHRKGVFNDSE*RGKVSE Trigger: CTCTGATACCTTCCCTCTGCACTCTGAATCATTAAA...CACACCCTTACGATGTATCTGAATGGCATCTGTCACTCTTAGTTTCTGGCAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 |
||
| 3UTR-3UTR GCA 90 bp | TTCTATGTGGAAATAAAGAACACCCCCAGGATTCCACGGTTAACTAAAGGTTCCTCCGGAGTGGGGTGGTaGAAGTTAATTTATCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: FYVEIKNTPRIPRLTKGSSGVGW*KLIYQF Trigger: AAACTGATAAATTAACTTGCACCACCCCACTCCGGA...GGAACCTTTAGTTAACCGTGGAATCCTGGGGGTGTTCTTTATTTCCACATAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000130064.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTCTATGTGGAAATAAAGAACACCCCCAGGATTCCACGGTTAACTAAAGGTGGCTCTGACACAGTTTaGCTTCTAAAAGAACACTCA | + |
|
Preference number: 2 (lower is better) Translates to: VFYVEIKNTPRIPRLTKGGSDTV*LLKEHS Trigger: TGAGTGTTCTTTTAGAAGTCAAACTGTGTCAGAGCC...ACCTTTAGTTAACCGTGGAATCCTGGGGGTGTTCTTTATTTCCACATAGAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000130064.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCGGCTGGCAGAGGGAATaGCAGCCTGGCACCTTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGPHHPESRGWQRELQPGGWQRE*QPGTFG Trigger: TCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC...GCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR CCA 72 bp | GTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTaGCAGAGGGAATTGCAGCCTGGCACCTTCGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: VVLGPHHPESRG*QRELQPGTFGH Trigger: ATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCGGACATTTGACACCTTaGACATCTTTCTGGCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LGPHHPESRGWQRELQPGGHLTP*TSFWLA Trigger: TGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCC...GCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTACAGAGGGCAGGAATTaGTCTTACTTAGCCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VLGPHHPESRGWQRELQPTEGRN*SYLARA Trigger: TGCCCTGGCTAAGTAAGACAAATTCCTGCCCTCTGT...AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGGTATCAGAGAGGCTGAGCGCTCAGCCCTGGCAGCTGCCTCACGTGTACGGACATTTGACACCTTaGACATCTTTCTGGCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GKVSERLSAQPWQLPHVYGHLTP*TSFWLA Trigger: TGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCC...GTACACGTGAGGCAGCTGCCAGGGCTGAGCGCTCAGCCTCTCTGATACCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGCGGCTGGCAGAGGGAATaGCAGCCTGGCACCTTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: IAAWHLRTFDTFDIFLASGWQRE*QPGTFG Trigger: TCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC...GCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGTGGCTGGCAGAGGGAATaGCAGCCTGGCACCTTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVSRAAAGWVKKPLMIQSGWQRE*QPGTFG Trigger: TCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC...ACTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGCAGGCTGGCAGAGGGAATaGCAGCCTGGCACCTTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: LQPGTFGHLTPLTSFWLAGWQRE*QPGTFG Trigger: TCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC...TGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR GCA 72 bp | GAAGGAGCCCCTGCTTCGGCTGGTGAGCCGTGCAGCTaGAGGGTGGGTAAAGAAACCTTTAATGATTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: EGAPASAGEPCS*RVGKETFNDSE Trigger: CTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGCCGAAGCAGGGGCTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR GCA 72 bp | GATTCGGAAGGAGCCCCTGCTTCGGCTGGTGAGCCGTaGAGCTGCAGGGTGGGTAAAGAAACCTTTAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: DSEGAPASAGEP*SCRVGKETFND Trigger: ATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGCCGAAGCAGGGGCTCCTTCCGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGGGACATTTGACACCTTaGACATCTTTCTGGCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LVVLGPHHPESRGWQRELGHLTP*TSFWLA Trigger: TGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCC...CAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACAGGCACCTTCGGACATTaGACACCTTTGACATCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GWQRELQPGTFGHLTPLTGTFGH*TPLTSF Trigger: GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCC...TGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGCAACAGAGGGCAGGAATTaGTCTTACTTAGCCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LQPGTFGHLTPLTSFWLATEGRN*SYLARA Trigger: TGCCCTGGCTAAGTAAGACAAATTCCTGCCCTCTGT...TGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000149296.8 ENSMUST00000151063.2 |
||
| 3UTR TCA 72 bp | CCCACTTTCAAAACTTCCACAAGGACTGTCCCCCTTTaGAGAGTCTCTAAACAGCCTTGCCCTACTTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PTFKTSTRTVPL*RVSKQPCPTWA Trigger: AGCCCAAGTAGGGCAAGGCTGTTTAGAGACTCTTCAAAGGGGGACAGTCCTTGTGGAAGTTTTGAAAGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGTGGCACCTTCGGACATTaGACACCTTTGACATCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LVSRAAAGWVKKPLMIQSGTFGH*TPLTSF Trigger: GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCC...ACTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGGGCACCTTCGGACATTaGACACCTTTGACATCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RELQPGTFGHLTPLTSFWGTFGH*TPLTSF Trigger: GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCC...CCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGCGGCACCTTCGGACATTaGACACCTTTGACATCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: IAAWHLRTFDTFDIFLASGTFGH*TPLTSF Trigger: GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCC...GCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCGGACATTTGACACCTTaGACATCTTTCTGGCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QRELQPGTFGHLTPLTSFGHLTP*TSFWLA Trigger: TGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCC...GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGCGGACATTTGACACCTTaGACATCTTTCTGGCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IAAWHLRTFDTFDIFLASGHLTP*TSFWLA Trigger: TGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCC...GCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| 3UTR TCA 72 bp | TTAAACAGCTACAAAGCGCCAGGCTCTGACACAGTTTaGCTTCTAAAAGAACACTCAGACCCAAGCCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LNSYKAPGSDTV*LLKEHSDPSPG Trigger: ACCAGGGCTTGGGTCTGAGTGTTCTTTTAGAAGTCAAACTGTGTCAGAGCCTGGCGCTTTGTAGCTGTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000154098.3 |
||
| 3UTR TCA 72 bp | GGATGGACAGAAGTCCTTTCCCCCAGGAAAGATTCTTaGGGTTGCCAGAAACTAAGAGTGACAGATGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: GWTEVLSPRKDS*GCQKLRVTDAI Trigger: AATGGCATCTGTCACTCTTAGTTTCTGGCAACCTCAAGAATCTTTCCTGGGGGAAAGGACTTCTGTCCATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 |
||
| 3UTR TCA 72 bp | TTTATCAGTTTTAAACAGCTACAAAGCGCCAGGCTCTaGCACAGTTTGACTTCTAAAAGAACACTCAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: FISFKQLQSARL*HSLTSKRTLRP Trigger: GGGTCTGAGTGTTCTTTTAGAAGTCAAACTGTGTCAGAGCCTGGCGCTTTGTAGCTGTTTAAAACTGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000154098.3 |
||
| CDS-3UTR GCA 90 bp | GGAGCCCCTGCTTCGGCTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTCTCCAGGCGGTGCTaGTGCTGCTGCCTGCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAPASAGEPCSCRVGKETFSRRC*CCCLRA Trigger: GGCTCGCAGGCAGCAGCAGCAGCACCGCCTGGAGAA...GGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGCCGAAGCAGGGGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
||
| CDS-3UTR GCA 90 bp | CTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCAGGCGGTGCTGCTGCTaGTGCCTGCGAGCCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGPHHPESRGWQRELQPGRRCCC*CLRALS Trigger: AGACAAGGCTCGCAGGCAGCAGCAGCAGCACCGCCT...GCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTCTCCAGGCGGTGCTaGTGCTGCTGCCTGCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALVVLGPHHPESRGWQREFSRRC*CCCLRA Trigger: GGCTCGCAGGCAGCAGCAGCAGCACCGCCTGGAGAA...TTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAACCTGCCTTCCAGCCCTaGTCTCTCCTTAGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALVVLGPHHPESRGWQREPAFQP*SLLSQG Trigger: GCCCTGGCTAAGGAGAGAGCAGGGCTGGAAGGCAGG...TTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114095.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCCCCTGCTTCGGCTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCCACAGCCTTGGCAGCTaGTGGGGGAAGGTGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GAPASAGEPCSCRVGKETHSLGS*WGKVVF Trigger: GAACACCACCTTCCCCCACCAGCTGCCAAGGCTGTG...GGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGCCGAAGCAGGGGCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000114095.2 ENSMUST00000154098.3 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAACGGTGCTGCTGCTGCTaGCTGCGAGCCTTGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALVVLGPHHPESRGWQRERCCCC*LRALSF Trigger: GAAAGACAAGGCTCGCAGGCAGCAGCAGCAGCACCG...TTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
||
| CDS-3UTR GCA 90 bp | CTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCGCTGCTGCTGCTGCCTaGGAGCCTTGTCTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGPHHPESRGWQRELQPGAAAAA*EPCLSC Trigger: ACAAGAAAGACAAGGCTCGCAGGCAGCAGCAGCAGC...GCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
||
| CDS-3UTR GCA 90 bp | GTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGAGGCGGTGCTGCTGCTaGTGCCTGCGAGCCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVLGPHHPESRGWQRELQRRCCC*CLRALS Trigger: AGACAAGGCTCGCAGGCAGCAGCAGCAGCACCGCCT...CTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAACACTCAGACCCAAGCCCTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTTCTCCAGGCGGTGCTaGTGCTGCTGCCTGCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEHSDPSPGCSRAPPPRVFSRRC*CCCLRA Trigger: GGCTCGCAGGCAGCAGCAGCAGCACCGCCTGGAGAA...GACTCTGGGTGGTGGGGCCCTAGAACAACCAGGGCTTGGGTCTGAGTGTTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
||
| CDS-3UTR CCA 90 bp | GGAGCCCCTGCTTCGGCTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCAGCTGTCATCATCAGTaGGCAGCTCATGGCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GAPASAGEPCSCRVGKETSCHHQ*AAHGGT Trigger: TGTGCCGCCATGAGCTGCCCACTGATGATGACAGCT...GGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGCCGAAGCAGGGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTTCTCCACCACAGCCTTaGCAGCTGGTGGGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGPHHPESRGWQRELQPSPPQP*QLVGEG Trigger: ACCTTCCCCCACCAGCTGCCAAGGCTGTGGTGGAGA...AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000114095.2 ENSMUST00000154098.3 |
||
| CDS-3UTR GCA 90 bp | GTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTATTCCGGTCCTTTCCTaGTCCTGCCTTCCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLGPHHPESRGWQRELQPIPVLS*SCLPAL Trigger: CAGGGCTGGAAGGCAGGAGCAGGAAAGGACCGGAAT...AGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114095.2 |
||
| CDS-3UTR GCA 90 bp | AACACTCAGACCCAAGCCCTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGACGGTGCTGCTGCTGCTaGCTGCGAGCCTTGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTQTQALVVLGPHHPESRRCCCC*LRALSF Trigger: GAAAGACAAGGCTCGCAGGCAGCAGCAGCAGCACCG...TCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAGGGCTTGGGTCTGAGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAAAATAAGACGCCATaGCTCCTGGGCTGCCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVVLGPHHPESRGWQRELQNKTP*LLGCRA Trigger: AGCCCGGCAGCCCAGGAGCCATGGCGTCTTATTTTG...CAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129233.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACCGGTGCTGCTGCTGCTaGCTGCGAGCCTTGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLAEGIAAWHLRTFDTFDRCCCC*LRALSF Trigger: GAAAGACAAGGCTCGCAGGCAGCAGCAGCAGCACCG...GTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTCTCAGCCCTGGCAGCTaGCTCACGTGTACATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGWQRELQPGTFGHLTPLSPGS*LTCTWL Trigger: GAGCCATGTACACGTGAGGCAGCTGCCAGGGCTGAG...AGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114095.2 |
||
| 3UTR CAA 72 bp | CCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATaGCAGCCTGGCACCTTCGGACATTTGACACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PHHPESRGWQRE*QPGTFGHLTPL Trigger: CAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
||
| CDS-3UTR GCA 90 bp | AACACTCAGACCCAAGCCCTGGTTGTTCTAGGGCCCCACCACCCAGAGTCTAGAGCTGCTGCTGCTGCCTaGGAGCCTTGTCTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTQTQALVVLGPHHPESRAAAAA*EPCLSC Trigger: ACAAGAAAGACAAGGCTCGCAGGCAGCAGCAGCAGC...TCTAGACTCTGGGTGGTGGGGCCCTAGAACAACCAGGGCTTGGGTCTGAGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGTAGGCGGTGCTGCTGCTaGTGCCTGCGAGCCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LVSRAAAGWVKKPLMIQSRRCCC*CLRALS Trigger: AGACAAGGCTCGCAGGCAGCAGCAGCAGCACCGCCT...ACTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000130064.8 ENSMUST00000154098.3 |
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| CDS-3UTR CCA 90 bp | GCTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGCACAGCCTTGGCAGCTaGTGGGGGAAGGTGGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: AGEPCSCRVGKETFNDSEHSLGS*WGKVVF Trigger: GAACACCACCTTCCCCCACCAGCTGCCAAGGCTGTG...CTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069580.12 ENSMUST00000154098.3 |
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| CDS-3UTR CCA 90 bp | CAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCCTGAGCGCTCAGCCCTaGCAGCTGCCTCACGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: QRELQPGTFGHLTPLTSFLSAQP*QLPHVY Trigger: GTACACGTGAGGCAGCTGCCAGGGCTGAGCGCTCAG...GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114095.2 |
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| CDS-3UTR GCA 90 bp | ATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGCCGGTGCTGCTGCTGCTaGCTGCGAGCCTTGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: IAAWHLRTFDTFDIFLASRCCCC*LRALSF Trigger: GAAAGACAAGGCTCGCAGGCAGCAGCAGCAGCACCG...GCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
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| CDS-3UTR GCA 90 bp | CCCCAGGAAAGATTCTTGAGGTTGCCAGAAACTAAGAGTGACAGATGCCATTCATTCTCCAGGCGGTGCTaGTGCTGCTGCCTGCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PQERFLRLPETKSDRCHSFSRRC*CCCLRA Trigger: GGCTCGCAGGCAGCAGCAGCAGCACCGCCTGGAGAA...TGAATGGCATCTGTCACTCTTAGTTTCTGGCAACCTCAAGAATCTTTCCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 |
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| CDS-3UTR CCA 90 bp | CTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCAGCTGTCATCATCAGTaGGCAGCTCATGGCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: LAEGIAAWHLRTFDTFDISCHHQ*AAHGGT Trigger: TGTGCCGCCATGAGCTGCCCACTGATGATGACAGCT...GATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
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| CDS-3UTR CCA 90 bp | GCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCACAGCCTTGGCAGCTaGTGGGGGAAGGTGGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: AEGIAAWHLRTFDTFDIFHSLGS*WGKVVF Trigger: GAACACCACCTTCCCCCACCAGCTGCCAAGGCTGTG...AAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000114095.2 ENSMUST00000154098.3 |
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| CDS-3UTR CCA 90 bp | CAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTCTCCACCACAGCCTTaGCAGCTGGTGGGGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: QRELQPGTFGHLTPLTSFSPPQP*QLVGEG Trigger: ACCTTCCCCCACCAGCTGCCAAGGCTGTGGTGGAGA...GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000114095.2 ENSMUST00000154098.3 |
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| 3UTR CAA 72 bp | TGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTaGACACCTTTGACATCTTTCTGGCTAGCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: WQRELQPGTFGH*TPLTSFWLAAG Trigger: CCCTGCTGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| CDS-3UTR GCA 90 bp | TGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTGCTGCTGCTGCTGCCTaGGAGCCTTGTCTTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: WQRELQPGTFGHLTPLTSAAAAA*EPCLSC Trigger: ACAAGAAAGACAAGGCTCGCAGGCAGCAGCAGCAGC...AGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
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| CDS-3UTR GCA 90 bp | GGTTGCCAGAAACTAAGAGTGACAGATGCCATTCAGATACATCGTAAGGGTGTGAGGCGGTGCTGCTGCTaGTGCCTGCGAGCCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GCQKLRVTDAIQIHRKGVRRCCC*CLRALS Trigger: AGACAAGGCTCGCAGGCAGCAGCAGCAGCACCGCCT...CACACCCTTACGATGTATCTGAATGGCATCTGTCACTCTTAGTTTCTGGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 |
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| CDS-3UTR CCA 90 bp | GCTGGTGAGCCGTGCAGCTGCAGGGTGGGTAAAGAAACCTTTAATGATTCAGAGAGCTGTCATCATCAGTaGGCAGCTCATGGCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: AGEPCSCRVGKETFNDSESCHHQ*AAHGGT Trigger: TGTGCCGCCATGAGCTGCCCACTGATGATGACAGCT...CTCTGAATCATTAAAGGTTTCTTTACCCACCCTGCAGCTGCACGGCTCACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000130064.8 ENSMUST00000154098.3 |
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| CDS-3UTR CCA 90 bp | ATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCTGGCTAGCAGCTGTCATCATCAGTaGGCAGCTCATGGCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IAAWHLRTFDTFDIFLASSCHHQ*AAHGGT Trigger: TGTGCCGCCATGAGCTGCCCACTGATGATGACAGCT...GCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
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| CDS-3UTR CCA 90 bp | CAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCTTTCAGCTGTCATCATCAGTaGGCAGCTCATGGCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QRELQPGTFGHLTPLTSFSCHHQ*AAHGGT Trigger: TGTGCCGCCATGAGCTGCCCACTGATGATGACAGCT...GAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000130064.8 ENSMUST00000154098.3 |
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| 3UTR CAA 72 bp | GAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTaGACATCTTTCTGGCTAGCAGCAGGGTGGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ELQPGTFGHLTP*TSFWLAAGWRI Trigger: AATCCTCCACCCTGCTGCTAGCCAGAAAGATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000114095.2 ENSMUST00000125554.8 ENSMUST00000126065.8 ENSMUST00000129233.8 ENSMUST00000130064.8 ENSMUST00000149296.8 ENSMUST00000151063.2 ENSMUST00000154098.3 |
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| CDS-3UTR CCA 90 bp | TTCTATGTGGAAATAAAGAACACCCCCAGGATTCCACGGTTAACTAAAGGTTCCTCTCCACCACAGCCTTaGCAGCTGGTGGGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FYVEIKNTPRIPRLTKGSSPPQP*QLVGEG Trigger: ACCTTCCCCCACCAGCTGCCAAGGCTGTGGTGGAGA...GGAACCTTTAGTTAACCGTGGAATCCTGGGGGTGTTCTTTATTTCCACATAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069580.12 |
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| 3UTR CAA 72 bp | AGAGTCTCTAAACAGCCTTGCCCTACTTGGGCTGGCTaGACCTTTGATTCCTTGATAATGGCGCCTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVSKQPCPTWAG*TFDSLIMAPTG Trigger: TCCTGTAGGCGCCATTATCAAGGAATCAAAGGTCAAGCCAGCCCAAGTAGGGCAAGGCTGTTTAGAGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000125554.8 |
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| CDS-3UTR GCA 90 bp | GTTTTCTATGTGGAAATAAAGAACACCCCCAGGATTCCACGGTTAACTAAAGGTCGGTGCTGCTGCTGCTaGCTGCGAGCCTTGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: VFYVEIKNTPRIPRLTKGRCCCC*LRALSF Trigger: GAAAGACAAGGCTCGCAGGCAGCAGCAGCAGCACCG...ACCTTTAGTTAACCGTGGAATCCTGGGGGTGTTCTTTATTTCCACATAGAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000130064.8 |
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| 3UTR CAA 72 bp | GGGATGGACAGAAGTCCTTTCCCCCAGGAAAGATTCTaGAGGTTGCCAGAAACTAAGAGTGACAGATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GMDRSPFPQERF*RLPETKSDRCH Trigger: ATGGCATCTGTCACTCTTAGTTTCTGGCAACCTCAAGAATCTTTCCTGGGGGAAAGGACTTCTGTCCATCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 |
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| CDS-3UTR GCA 90 bp | GTTTTCTATGTGGAAATAAAGAACACCCCCAGGATTCCACGGTTAACTAAAGGTGCTGCTGCTGCTGCCTaGGAGCCTTGTCTTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VFYVEIKNTPRIPRLTKGAAAAA*EPCLSC Trigger: ACAAGAAAGACAAGGCTCGCAGGCAGCAGCAGCAGC...ACCTTTAGTTAACCGTGGAATCCTGGGGGTGTTCTTTATTTCCACATAGAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000130064.8 |
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| 3UTR CAA 72 bp | GACAGAAGTCCTTTCCCCCAGGAAAGATTCTTGAGGTaGCCAGAAACTAAGAGTGACAGATGCCATTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DRSPFPQERFLR*PETKSDRCHSD Trigger: ATCTGAATGGCATCTGTCACTCTTAGTTTCTGGCAACCTCAAGAATCTTTCCTGGGGGAAAGGACTTCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 |
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| CDS GCA 90 bp | TCCAAGCCCCGCGCACTCTTCTCGCGAGTTCCAGCAACATATTGTTaGGGGCCTCACGCTCAGGGTTCAACGGCTCGCAGTCGTGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: SKPRALFSRVPATYC*GPHAQGSTARSRAH Trigger: ATGAGCACGACTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAGTGCGCGGGGCTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000114095.2 ENSMUST00000151063.2 |
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| CDS-3UTR CAA 90 bp | CTAGGGCCCCACCACCCAGAGTCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCACAGAGGGCAGGAATTaGTCTTACTTAGCCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGPHHPESRGWQRELQPGTEGRN*SYLARA Trigger: TGCCCTGGCTAAGTAAGACAAATTCCTGCCCTCTGT...GCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGACTCTGGGTGGTGGGGCCCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000130064.8 ENSMUST00000154098.3 |
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| CDS-3UTR CAA 90 bp | GGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACAAGGCACACGGGGCACTaGAGATCAGCCTTGGCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GWQRELQPGTFGHLTPLTRHTGH*RSALAL Trigger: TAGCGCCAAGGCTGATCTCAAGTGCCCCGTGTGCCT...TGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000114095.2 ENSMUST00000154098.3 |
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| CDS GCA 90 bp | ACGGGGCACTTGAGATTCTTCTCGCGAGTTCCAGCAACATATTGTTaGGGGCCTCACGCTCAGGGTTCAACGGCTCGCAGTCGTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TGHLRFFSRVPATYC*GPHAQGSTARSRAH Trigger: ATGAGCACGACTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAATCTCAAGTGCCCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126065.8 |
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| CDS-3UTR CAA 90 bp | TCTAGAGGCTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTACAGAGGGCAGGAATTaGTCTTACTTAGCCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRGWQRELQPGTFGHLTPTEGRN*SYLARA Trigger: TGCCCTGGCTAAGTAAGACAAATTCCTGCCCTCTGT...AGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAGCCTCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000130064.8 ENSMUST00000154098.3 |
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| CDS-3UTR CAA 90 bp | CTGGCAGAGGGAATTGCAGCCTGGCACCTTCGGACATTTGACACCTTTGACATCACAGAGGGCAGGAATTaGTCTAGAGAAATCAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LAEGIAAWHLRTFDTFDITEGRN*SREIKS Trigger: GCTCTTGATTTCTCTAGACAAATTCCTGCCCTCTGT...GATGTCAAAGGTGTCAAATGTCCGAAGGTGCCAGGCTGCAATTCCCTCTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114095.2 |
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| CDS-3UTR CAA 90 bp | TTCTATGTGGAAATAAAGAACACCCCCAGGATTCCACGGTTAACTAAAGGTTCCACAGAGGGCAGGAATTaGTCTTACTTAGCCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FYVEIKNTPRIPRLTKGSTEGRN*SYLARA Trigger: TGCCCTGGCTAAGTAAGACAAATTCCTGCCCTCTGT...GGAACCTTTAGTTAACCGTGGAATCCTGGGGGTGTTCTTTATTTCCACATAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000069595.13 ENSMUST00000130064.8 |
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| CDS CAA 90 bp | CAGCTCCAAGCCCCGCGCACTCTTCTCGCGAGTTCCAGCAACATATaGTTGCGGGCCTCACGCTCAGGGTTCAACGGCTCGCAGTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLQAPRTLLASSSNI*LRASRSGFNGSQSC Trigger: GCACGACTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAGTGCGCGGGGCTTGGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000114095.2 ENSMUST00000151063.2 |
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| CDS CAA 72 bp | GCCCCGCGCACTCTTCTCGCGAGTTCCAGCAACATATaGTTGCGGGCCTCACGCTCAGGGTTCAACGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: APRTLLASSSNI*LRASRSGFNGS Trigger: CGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAGTGCGCGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000114095.2 ENSMUST00000151063.2 |
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| CDS CAA 90 bp | CTCCAAGCCCCGCGCACTCTTCTCGCGAGTTCCAGCAACATATTGTaGCGGGCCTCACGCTCAGGGTTCAACGGCTCGCAGTCGTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LQAPRTLLASSSNIL*RASRSGFNGSQSCS Trigger: TGAGCACGACTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAGTGCGCGGGGCTTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000114095.2 ENSMUST00000151063.2 |
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| CDS CAA 72 bp | CCGCGCACTCTTCTCGCGAGTTCCAGCAACATATTGTaGCGGGCCTCACGCTCAGGGTTCAACGGCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRTLLASSSNIL*RASRSGFNGSQ Trigger: CTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAGTGCGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000114095.2 ENSMUST00000151063.2 |
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| CDS GCA 72 bp | CGCGCACTCTTCTCGCGAGTTCCAGCAACATATTGTTaGGGGCCTCACGCTCAGGGTTCAACGGCTCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RALFSRVPATYC*GPHAQGSTARS Trigger: ACTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAGTGCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069580.12 ENSMUST00000114095.2 ENSMUST00000151063.2 |
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| CDS CAA 90 bp | GCACACGGGGCACTTGAGATTCTTCTCGCGAGTTCCAGCAACATATaGTTGCGGGCCTCACGCTCAGGGTTCAACGGCTCGCAGTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AHGALEILLASSSNI*LRASRSGFNGSQSC Trigger: GCACGACTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAATCTCAAGTGCCCCGTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126065.8 |
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| CDS CAA 90 bp | CACGGGGCACTTGAGATTCTTCTCGCGAGTTCCAGCAACATATTGTaGCGGGCCTCACGCTCAGGGTTCAACGGCTCGCAGTCGTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: HGALEILLASSSNIL*RASRSGFNGSQSCS Trigger: TGAGCACGACTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAATCTCAAGTGCCCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126065.8 |
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| CDS GCA 72 bp | ATCTGCCTCTTCTCGCGAGTTCCAGCAACATATTGTTaGGGGCCTCACGCTCAGGGTTCAACGGCTCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ICLFSRVPATYC*GPHAQGSTARS Trigger: ACTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAGGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125554.8 |
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| CDS CAA 72 bp | TATCTGCCTCTTCTCGCGAGTTCCAGCAACATATTGTaGCGGGCCTCACGCTCAGGGTTCAACGGCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YLPLLASSSNIL*RASRSGFNGSQ Trigger: CTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAGGCAGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125554.8 |
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| CDS CAA 72 bp | AGAGTGATTCTTCTCGCGAGTTCCAGCAACATATTGTaGCGGGCCTCACGCTCAGGGTTCAACGGCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVILLASSSNIL*RASRSGFNGSQ Trigger: CTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAATCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129233.8 ENSMUST00000149296.8 |
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| CDS CAA 72 bp | CTTGAGATTCTTCTCGCGAGTTCCAGCAACATATTGTaGCGGGCCTCACGCTCAGGGTTCAACGGCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LEILLASSSNIL*RASRSGFNGSQ Trigger: CTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAATCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126065.8 |
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| CDS GCA 72 bp | TTGAGATTCTTCTCGCGAGTTCCAGCAACATATTGTTaGGGGCCTCACGCTCAGGGTTCAACGGCTCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LRFFSRVPATYC*GPHAQGSTARS Trigger: ACTGCGAGCCGTTGAACCCTGAGCGTGAGGCCCGCAACAATATGTTGCTGGAACTCGCGAGAAGAATCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126065.8 |
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