Pregenerated sensors for RNF170 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013878Ensembl transcript IDs: ENSMUST00000014022.15, ENSMUST00000110575.8, ENSMUST00000110579.10, ENSMUST00000124757.8, ENSMUST00000124867.3, ENSMUST00000140819.8, ENSMUST00000153528.8, ENSMUST00000209300.2, ENSMUST00000209707.2
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCCCGAGCAGGCCAGAAGAAGACAGCAGATCCCTTGGAATGGGTaGCAGACCCTTTGGAATCACAGTGGAGGTGGTAGGAGCAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: VPEQARRRQQIPWNG*QTLWNHSGGGRSKK Trigger: CTTTTTGCTCCTACCACCTCCACTGTGATTCCAAAGGGTCTGTCACCCATTCCAAGGGATCTGCTGTCTTCTTCTGGCCTGCTCGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR TCA 90 bp | AGGTCAGAGGACAGCTCACAGAATCCGTTCTGTACTTCCATGATGTaGGACCCAGGTTGTCAGGCTTGGGAGCAAGCACCTTTCCCCACT | + |
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Preference number: 1 (lower is better) Translates to: RSEDSSQNPFCTSMM*DPGCQAWEQAPFPT Trigger: AGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACCTGGGTCTCACATCATGGAAGTACAGAACGGATTCTGTGAGCTGTCCTCTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR TCA 90 bp | ACAAAGCATTATCCTAATGCGGAACATCCAGAAGAGGCCCCCAACTaGGAACACTTCCCTGAACGCATGTCTCAGCAAGGTGGGGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: TKHYPNAEHPEEAPN*EHFPERMSQQGGEV Trigger: GACCTCCCCACCTTGCTGAGACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCGCATTAGGATAATGCTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
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| 3UTR TCA 90 bp | AGCACCGAAACTGTTCCAGGGAAGGAAAACTGTGTTATGAAAACCTaGCTCCAGAGAATTCCACTCCTCCCGCTTCTCCTCAGACTAGCT | + |
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Preference number: 1 (lower is better) Translates to: STETVPGKENCVMKT*LQRIPLLPLLLRLA Trigger: AGCTAGTCTGAGGAGAAGCGGGAGGAGTGGAATTCTCTGGAGTCAGGTTTTCATAACACAGTTTTCCTTCCCTGGAACAGTTTCGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR CCA 90 bp | CCTTCACAACTGAGAATGGAGCTGGAGAAACCCTACTCTAGTGAGTaGTTAATGGAACAGTTCCCTTCTCATTCCCCACAGAGCCACTCA | + |
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Preference number: 1 (lower is better) Translates to: PSQLRMELEKPYSSE*LMEQFPSHSPQSHS Trigger: TGAGTGGCTCTGTGGGGAATGAGAAGGGAACTGTTCCATTAACCACTCACTAGAGTAGGGTTTCTCCAGCTCCATTCTCAGTTGTGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR TCA 90 bp | AGCTTAGAAGCACCGAAACTGTTCCAGGGAAGGAAAACTGTGTTATaGAAACCTGACTCCAGAGAATTCCACTCCTCCCGCTTCTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: SLEAPKLFQGRKTVL*KPDSREFHSSRFSS Trigger: TGAGGAGAAGCGGGAGGAGTGGAATTCTCTGGAGTCAGGTTTTCATAACACAGTTTTCCTTCCCTGGAACAGTTTCGGTGCTTCTAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR CCA 90 bp | GGCAACGAGCTCCCCTACTCAATAGCTTCCCAAGTTGGTGATGAGTaGCCACAGTTTTCTATGATGCATGCCACTCTTAACTTCATTTGC | + |
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Preference number: 1 (lower is better) Translates to: GNELPYSIASQVGDE*PQFSMMHATLNFIC Trigger: GCAAATGAAGTTAAGAGTGGCATGCATCATAGAAAACTGTGGCCACTCATCACCAACTTGGGAAGCTATTGAGTAGGGGAGCTCGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR TCA 90 bp | GGTGGGGAGGTCCATGATCCTTTCCATAATAGATCTAGGCTGCCCTaGGAATCTCCGGTTATAATCATTAACATCTTGACGCAATCTTAT | + |
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Preference number: 1 (lower is better) Translates to: GGEVHDPFHNRSRLP*ESPVIIINILTQSY Trigger: ATAAGATTGCGTCAAGATGTTAATGATTATAACCGGAGATTCTCAGGGCAGCCTAGATCTATTATGGAAAGGATCATGGACCTCCCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124757.8 |
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| 3UTR GCA 90 bp | GAGTGGCCACAGTTTTCTATGATGCATGCCACTCTTAACTTCATTTaGAAGTATACCCTCGAGATTGATAAAGGCTGTGACGAGTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: EWPQFSMMHATLNFI*KYTLEIDKGCDECS Trigger: AGAACACTCGTCACAGCCTTTATCAATCTCGAGGGTATACTTGCAAATGAAGTTAAGAGTGGCATGCATCATAGAAAACTGTGGCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR TCA 90 bp | TTTGAAAAGCCAATTCCTTACATAATAAGCAGGAGTTTAAATCAGTaGTGGTGTAGCATCCCTACAAAGGAAGGGGATTGTGAGGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: FEKPIPYIISRSLNQ*WCSIPTKEGDCEVE Trigger: CTCAACCTCACAATCCCCTTCCTTTGTAGGGATGCTACACCATCACTGATTTAAACTCCTGCTTATTATGTAAGGAATTGGCTTTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR TCA 90 bp | CCAAAACCTTCACTTGCTGACAGAACACCATGTAAGGGAGAGTTTTaGAAAGCCAATTCCTTACATAATAAGCAGGAGTTTAAATCAGTG | + |
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Preference number: 1 (lower is better) Translates to: PKPSLADRTPCKGEF*KANSLHNKQEFKSV Trigger: CACTGATTTAAACTCCTGCTTATTATGTAAGGAATTGGCTTTTCAAAACTCTCCCTTACATGGTGTTCTGTCAGCAAGTGAAGGTTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR GCA 90 bp | CCTTTCCATAATCTGTGTATTACAGGAAAAAGCTGTTACACCTTCTaGACCATTATTATCACTTTTCACTTTGTGTTGTTCAAGAGAATG | + |
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Preference number: 1 (lower is better) Translates to: PFHNLCITGKSCYTF*TIIITFHFVLFKRM Trigger: CATTCTCTTGAACAACACAAAGTGAAAAGTGATAATAATGGTGCAGAAGGTGTAACAGCTTTTTCCTGTAATACACAGATTATGGAAAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110579.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGACAGGAGTGATCTTTCTCATCCACGTGAGAACAGCAGGCAACAAGCAGGCATGTGCACACATGCATaGAGGTGCCCGAGCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RDRSDLSHPRENSRQQAGMCTHA*RCPSRP Trigger: TGGCCTGCTCGGGCACCTCCATGCATGTGTGCACAT...GCCTGCTTGTTGCCTGCTGTTCTCACGTGGATGAGAAAGATCACTCCTGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR CAA 90 bp | GAATCCGTTCTGTACTTCCATGATGTGAGACCCAGGTTGTCAGGCTaGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: ESVLYFHDVRPRLSG*GASTFPHCPAFGLG Trigger: ACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACCTGGGTCTCACATCATGGAAGTACAGAACGGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR CAA 90 bp | CAGCTCACAGAATCCGTTCTGTACTTCCATGATGTGAGACCCAGGTaGTCAGGCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: QLTESVLYFHDVRPR*SGLGASTFPHCPAF Trigger: AAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACCTGGGTCTCACATCATGGAAGTACAGAACGGATTCTGTGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCAGTCTAGTCTACCAAGCAAGTTCCAGGACAGCTAGAGCTACACAGAGAGCTTATGTGCACACATaGATGGAGGTGCCCGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QASLVYQASSRTARATQRAYVHT*MEVPEQ Trigger: CTGCTCGGGCACCTCCATGCATGTGTGCACATAAGC...TCTCTGTGTAGCTCTAGCTGTCCTGGAACTTGCTTGGTAGACTAGACTGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGGTAGGATCTAGTCTAGGCAGACCCTaGACTTGCAGCAATCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: AWEQAPFPTALLLVWVGSSLGRP*TCSNLL Trigger: TAGAAGATTGCTGCAAGTTCAGGGTCTGCCTAGACT...AGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR-3UTR TCA 90 bp | GGTTGTCAGGCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGCAGACAACACAGAATTaGGATAAACCTGTAGATCAC | + |
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Preference number: 2 (lower is better) Translates to: GCQAWEQAPFPTALLLVWQTTQN*DKPVDH Trigger: GTGATCTACAGGTTTATCTCAATTCTGTGTTGTCTG...CCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGATCTTTCTCATCCACGTGAGAACAGCAGGCAACAAGCAGGCTGATAACAGCACTCTTGATAACTaGGCCATCTCTCCAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GVIFLIHVRTAGNKQADNSTLDN*AISPVS Trigger: GGAGACTGGAGAGATGGCTCAGTTATCAAGAGTGCT...GTTATCAGCCTGCTTGTTGCCTGCTGTTCTCACGTGGATGAGAAAGATCACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTGTCAGGCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGCACCTAGTTAGTCTTTaGGTTATCACTTCTCGATAC | + |
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Preference number: 2 (lower is better) Translates to: GCQAWEQAPFPTALLLVWHLVSL*VITSRY Trigger: GTATCGAGAAGTGATAACCCAAAGACTAACTAGGTG...CCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110579.10 |
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| 3UTR-3UTR GCA 90 bp | GCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGGTAGGATCTATGAAAAAGCAGAGTTaGTCCAAGTCCATAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: AWEQAPFPTALLLVWVGSMKKQS*SKSIEL Trigger: AAGCTCTATGGACTTGGAGCAACTCTGCTTTTTCAT...AGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR-3UTR GCA 90 bp | ATGCGGAACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCCTGAACGCATGTATAATAGATCTAGGCTaGCCTGAGAATCTCCGGTTA | + |
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Preference number: 2 (lower is better) Translates to: MRNIQKRPPTENTSLNACIIDLG*PENLRL Trigger: TAACCGGAGATTCTCAGGGCAGCCTAGATCTATTAT...ACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124757.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTGCTGACAGAACACCATGTAAGGGAGAGTTTTGAAAAGCCAATTCCTTACGCGCGCGCACATTCATaGGCTTATGTGCACACATGC | + |
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Preference number: 2 (lower is better) Translates to: HLLTEHHVRESFEKPIPYARAHS*AYVHTC Trigger: GCATGTGTGCACATAAGCTCATGAATGTGCGCGCGC...GTAAGGAATTGGCTTTTCAAAACTCTCCCTTACATGGTGTTCTGTCAGCAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGGTAGGATCTCCTCAGCTTCTTGAATaGAGAAAGTACAAGTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: AWEQAPFPTALLLVWVGSPQLLE*RKYKCK Trigger: TTTACACTTGTACTTTCTGCATTCAAGAAGCTGAGG...AGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR-3UTR TCA 90 bp | CAAAAATGTCTTTTCATGCATGAAATTCTTACTCCAGGTGGCAGTGGCTCCTGCATCCCTTGGAATGGGTaGCAGACCCTTTGGAATCAC | + |
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Preference number: 2 (lower is better) Translates to: QKCLFMHEILTPGGSGSCIPWNG*QTLWNH Trigger: GTGATTCCAAAGGGTCTGTCACCCATTCCAAGGGAT...GCAGGAGCCACTGCCACCTGGAGTAAGAATTTCATGCATGAAAAGACATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR-3UTR GCA 90 bp | GGGATTGTGAGGTTGAGGCCAGTCTACACAGTGAAACACTGTCTCAAAAATGTCATTCATGAGCTTATGTaGACACATGCATGGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: GIVRLRPVYTVKHCLKNVIHELM*THAWRC Trigger: GCACCTCCATGCATGTGTGCACATAAGCTCATGAAT...GACATTTTTGAGACAGTGTTTCACTGTGTAGACTGGCCTCAACCTCACAATCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR CAA 90 bp | ATCAGTGATGGTGTAGCATCCCTACAAAGGAAGGGGATTGTGAGGTaGAGGCCAGTCTACACAGTGAAACACTGTCTCAAAAATGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: ISDGVASLQRKGIVR*RPVYTVKHCLKNVF Trigger: AAAGACATTTTTGAGACAGTGTTTCACTGTGTAGACTGGCCTCAACCTCACAATCCCCTTCCTTTGTAGGGATGCTACACCATCACTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR-3UTR CCA 90 bp | CTTATGTTCCTGGGACAAAATCATTTCCCTTTACAAGCTACTCTATTTTCCTTTCCAGGTTGTCAGGCTTaGGAGCAAGCACCTTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LMFLGQNHFPLQATLFSFPGCQA*EQAPFP Trigger: GGGGAAAGGTGCTTGCTCCCAAGCCTGACAACCTGG...AAAGGAAAATAGAGTAGCTTGTAAAGGGAAATGATTTTGTCCCAGGAACATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR-3UTR TCA 90 bp | ACTTGCTTTGAAGACTTTCTCAAATTGCTGCTGCATTCATCACTAATGATCCGTTCTGCAACAGGAAGCTaGTGCTGCTCTTCCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: TCFEDFLKLLLHSSLMIRSATGS*CCSSFL Trigger: AAGGAAGGAAGAGCAGCATCAGCTTCCTGTTGCAGA...ACGGATCATTAGTGATGAATGCAGCAGCAATTTGAGAAAGTCTTCAAAGCAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTTTTTGGCTCAGTAAGACTTTAGCCATACAGTGGTTTTGTATGTTACAATGTACTTCCATGATGTaGGACCCAGGTTGTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FPFWLSKTLAIQWFCMLQCTSMM*DPGCQA Trigger: AGCCTGACAACCTGGGTCTCACATCATGGAAGTACA...TTGTAACATACAAAACCACTGTATGGCTAAAGTCTTACTGAGCCAAAAAGGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGTTTCCTCAAAATCGTACCCATTACTACTTGTTCCCAAGGTTACTTATGTCTACCTCAGCTTCTTaGATGCAGAAAGTACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SLFPQNRTHYYLFPRLLMSTSAS*MQKVQV Trigger: CACTTGTACTTTCTGCATTCAAGAAGCTGAGGTAGA...CATAAGTAACCTTGGGAACAAGTAGTAATGGGTACGATTTTGAGGAAACAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR-3UTR TCA 90 bp | CACTTGCTGACAGAACACCATGTAAGGGAGAGTTTTGAAAAGCCAATTCCTTACATGTCTTTTCATGCATaGAATTCTTACTCCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: HLLTEHHVRESFEKPIPYMSFHA*NSYSRW Trigger: CCACCTGGAGTAAGAATTTCATGCATGAAAAGACAT...GTAAGGAATTGGCTTTTCAAAACTCTCCCTTACATGGTGTTCTGTCAGCAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR-3UTR TCA 90 bp | CTTATGTTCCTGGGACAAAATCATTTCCCTTTACAAGCTACTCTATTTTCCTTTCACACACCGAGACTCTaGCCTTTCCCTACTATCATA | + |
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Preference number: 2 (lower is better) Translates to: LMFLGQNHFPLQATLFSFHTPRL*PFPTII Trigger: TATGATAGTAGGGAAAGGTCAGAGTCTCGGTGTGTG...AAAGGAAAATAGAGTAGCTTGTAAAGGGAAATGATTTTGTCCCAGGAACATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR-3UTR TCA 90 bp | CCAGAATTCCAAACAAGGCTTCAGGTACAAAATCTAGAGGTGATATTAAATAGAAGATCTAGGCTGCCCTaGGAATCTCCGGTTATAATC | + |
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Preference number: 2 (lower is better) Translates to: PEFQTRLQVQNLEVILNRRSRLP*ESPVII Trigger: GATTATAACCGGAGATTCTCAGGGCAGCCTAGATCT...TCTATTTAATATCACCTCTAGATTTTGTACCTGAAGCCTTGTTTGGAATTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124757.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGCCACAGCTGGCTACAAGTTACTTTTGTATGTGTTTCTATAAAAAGTCCTTCTCTATTCTTGTATaGGTACCCACTGAGGATGAT | + |
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Preference number: 2 (lower is better) Translates to: KLPQLATSYFCMCFYKKSFSILV*VPTEDD Trigger: ATCATCCTCAGTGGGTACTCATACAAGAATAGAGAA...GGACTTTTTATAGAAACACATACAAAAGTAACTTGTAGCCAGCTGTGGCAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR-3UTR GCA 90 bp | TACTTATGTTCCTGGGACAAAATCATTTCCCTTTACAAGCTACTCTATTTTCCTCACATTTCCTCATTCTaGCCAAGGCACGATGAATCT | + |
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Preference number: 2 (lower is better) Translates to: YLCSWDKIISLYKLLYFPHISSF*PRHDES Trigger: AGATTCATCGTGCCTTGGGCAGAATGAGGAAATGTG...AGGAAAATAGAGTAGCTTGTAAAGGGAAATGATTTTGTCCCAGGAACATAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR-3UTR CCA 90 bp | CATGCCAATAGAAATGAACAGCCTGTTTCCTCAAAATCGTACCCATTACTACTTTTTACTTTGTGTTTGTaGTGTGTGATTGTGGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: HANRNEQPVSSKSYPLLLFTLCL*CVIVGC Trigger: ACACCCCACAATCACACACCACAAACACAAAGTAAA...AAGTAGTAATGGGTACGATTTTGAGGAAACAGGCTGTTCATTTCTATTGGCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR CAA 90 bp | TTTAAAGCACTGATAGACTCTACTTGCTTTGAAGACTTTCTCAAATaGCTGCTGCATTCATCACTAATGATCCGTAAAGATGAGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: FKALIDSTCFEDFLK*LLHSSLMIRKDEGT Trigger: TGTTCCCTCATCTTTACGGATCATTAGTGATGAATGCAGCAGCAATTTGAGAAAGTCTTCAAAGCAAGTAGAGTCTATCAGTGCTTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR CAA 90 bp | AATGGCAGACAACACCTTCATTTTAAGCCTAGATTAGGAAAGAAATaGACGTTTCGTTCAGAATCTCATTACTTGGCAGCTAATCTGATT | + |
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Preference number: 2 (lower is better) Translates to: NGRQHLHFKPRLGKK*TFRSESHYLAANLI Trigger: AATCAGATTAGCTGCCAAGTAATGAGATTCTGAACGAAACGTCAATTTCTTTCCTAATCTAGGCTTAAAATGAAGGTGTTGTCTGCCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTTTTTGGCTCAGTAAGACTTTAGCCATACAGTGGTTTTGTATGTTACAAGTTGAATGTCATAACTaGATATCAAAAGTGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: FPFWLSKTLAIQWFCMLQVECHN*ISKVPP Trigger: TGGAGGCACTTTTGATATTCAGTTATGACATTCAAC...TTGTAACATACAAAACCACTGTATGGCTAAAGTCTTACTGAGCCAAAAAGGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR GCA 72 bp | GGCAGGGCCTGGGCATCACCTCACACCCCATCCAGCTaGTCTCCAGTTAGCGGCTCAGTTACAGTACTCAGT | + |
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Preference number: 3 (lower is better) Translates to: GRAWASPHTPSS*SPVSGSVTVLS Trigger: ACTGAGTACTGTAACTGAGCCGCTAACTGGAGAGCAGCTGGATGGGGTGTGAGGTGATGCCCAGGCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
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| 3UTR GCA 72 bp | AGGCGTCTGTACAGCCATGGGGCCCAGGAACTCTGCTaGCCTTCACAACTGAGAATGGAGCTGGAGAAACCC | + |
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Preference number: 3 (lower is better) Translates to: RRLYSHGAQELC*PSQLRMELEKP Trigger: GGGTTTCTCCAGCTCCATTCTCAGTTGTGAAGGGCAGCAGAGTTCCTGGGCCCCATGGCTGTACAGACGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR GCA 72 bp | GGTAGGCGTCTGTACAGCCATGGGGCCCAGGAACTCTaGTGCCCTTCACAACTGAGAATGGAGCTGGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: GRRLYSHGAQEL*CPSQLRMELEK Trigger: TTTCTCCAGCTCCATTCTCAGTTGTGAAGGGCAGCAGAGTTCCTGGGCCCCATGGCTGTACAGACGCCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
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| 3UTR CCA 72 bp | CGCGCGCACATTCATGAGCTTATGTGCACACATGCATaGAGGTGCCCGAGCAGGCCAGAAGAAGACAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: RAHIHELMCTHA*RCPSRPEEDSR Trigger: TCTGCTGTCTTCTTCTGGCCTGCTCGGGCACCTCCATGCATGTGTGCACATAAGCTCATGAATGTGCGCGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
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| 3UTR-3UTR CAA 90 bp | CTAAAGAACCCCAATGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGAAGACAGCAGATCCCTaGGAATGGGTGACAGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LKNPNGCVCVCVCVCARAKTADP*EWVTDP Trigger: AGGGTCTGTCACCCATTCCAAGGGATCTGCTGTCTT...CGCGCGCGCACACACACACACACACACACACACACACCCATTGGGGTTCTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| 3UTR TCA 72 bp | GCCATGGGGCCCAGGAACTCTGCTGCCCTTCACAACTaGGAATGGAGCTGGAGAAACCCTACTCTAGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: AMGPRNSAALHN*EWSWRNPTLVS Trigger: ACTCACTAGAGTAGGGTTTCTCCAGCTCCATTCTCAGTTGTGAAGGGCAGCAGAGTTCCTGGGCCCCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| 3UTR TCA 72 bp | CAGGCCAGAAGAAGACAGCAGATCCCTTGGAATGGGTaGCAGACCCTTTGGAATCACAGTGGAGGTGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: QARRRQQIPWNG*QTLWNHSGGGR Trigger: CCTACCACCTCCACTGTGATTCCAAAGGGTCTGTCACCCATTCCAAGGGATCTGCTGTCTTCTTCTGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCAGTCTAGTCTACCAAGCAAGTTCCAGGACAGCTAGAGCTACACAGAGATGGGTGACAGACCCTTaGGAATCACAGTGGAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QASLVYQASSRTARATQRWVTDP*ESQWRW Trigger: CCACCTCCACTGTGATTCCAAAGGGTCTGTCACCCA...TCTCTGTGTAGCTCTAGCTGTCCTGGAACTTGCTTGGTAGACTAGACTGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| 3UTR TCA 72 bp | GACAGCTCACAGAATCCGTTCTGTACTTCCATGATGTaGGACCCAGGTTGTCAGGCTTGGGAGCAAGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: DSSQNPFCTSMM*DPGCQAWEQAP Trigger: AGGTGCTTGCTCCCAAGCCTGACAACCTGGGTCTCACATCATGGAAGTACAGAACGGATTCTGTGAGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR TCA 72 bp | CAGAGGACAGCTCACAGAATCCGTTCTGTACTTCCATaGTGTGAGACCCAGGTTGTCAGGCTTGGGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QRTAHRIRSVLP*CETQVVRLGSK Trigger: CTTGCTCCCAAGCCTGACAACCTGGGTCTCACATCATGGAAGTACAGAACGGATTCTGTGAGCTGTCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR GCA 72 bp | AGGTTGTCAGGCTTGGGAGCAAGCACCTTTCCCCACTaGCCTGCTTTTGGTTTGGGTAGGATCTCACTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RLSGLGASTFPH*PAFGLGRISLF Trigger: AAAGAGTGAGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR CCA 72 bp | GAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTaGGTAGGATCTCACTCTTTAGCTCAAGCTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EQAPFPTALLLV*VGSHSLAQASG Trigger: CCCAGAAGCTTGAGCTAAAGAGTGAGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGGTAGGATCTTGCCCTGCTTTTGGTTaGGGTAGGATCTCACTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AWEQAPFPTALLLVWVGSCPAFG*GRISLF Trigger: AAAGAGTGAGATCCTACCCAAACCAAAAGCAGGGCA...AGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGTACACTCATGTGAAGGTCAGAGGACAGCTCACAGAATCCGTTCTGTACTTCGATGTGAGACCCAGGTaGTCAGGCTTGGGAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VYTHVKVRGQLTESVLYFDVRPR*SGLGAS Trigger: GCTTGCTCCCAAGCCTGACAACCTGGGTCTCACATC...GAAGTACAGAACGGATTCTGTGAGCTGTCCTCTGACCTTCACATGAGTGTACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR TCA 72 bp | GTGGGGTGTGTGTGTGTGTGTGTGTGTACACTCATGTaGAGGTCAGAGGACAGCTCACAGAATCCGTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VGCVCVCVCTLM*RSEDSSQNPFC Trigger: ACAGAACGGATTCTGTGAGCTGTCCTCTGACCTTCACATGAGTGTACACACACACACACACACACACCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR TCA 72 bp | TATCCTAATGCGGAACATCCAGAAGAGGCCCCCAACTaGGAACACTTCCCTGAACGCATGTCTCAGCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: YPNAEHPEEAPN*EHFPERMSQQG Trigger: ACCTTGCTGAGACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCGCATTAGGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| 3UTR TCA 72 bp | GCACCGAAACTGTTCCAGGGAAGGAAAACTGTGTTATaGAAACCTGACTCCAGAGAATTCCACTCCTCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: APKLFQGRKTVL*KPDSREFHSSR Trigger: GCGGGAGGAGTGGAATTCTCTGGAGTCAGGTTTTCATAACACAGTTTTCCTTCCCTGGAACAGTTTCGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGGTAGGATCTTTCTACCTCAGCTTCTaGAATGCAGAAAGTACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: AWEQAPFPTALLLVWVGSFYLSF*NAESTS Trigger: ACTTGTACTTTCTGCATTCAAGAAGCTGAGGTAGAA...AGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGGTAGGATCTTTATTTACTTTGTGTTaGTGGTGTGTGATTGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AWEQAPFPTALLLVWVGSLFTLC*WCVIVG Trigger: CCCCACAATCACACACCACAAACACAAAGTAAATAA...AGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCAGTCTAGTCTACCAAGCAAGTTCCAGGACAGCTAGAGCTACACAGAGAGAGCAAAAAGCACTCTaGATAACTGAGCCATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QASLVYQASSRTARATQREQKAL*ITEPSL Trigger: GAGAGATGGCTCAGTTATCAAGAGTGCTTTTTGCTC...TCTCTGTGTAGCTCTAGCTGTCCTGGAACTTGCTTGGTAGACTAGACTGGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| 3UTR TCA 72 bp | ACTGTTCCAGGGAAGGAAAACTGTGTTATGAAAACCTaGCTCCAGAGAATTCCACTCCTCCCGCTTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TVPGKENCVMKT*LQRIPLLPLLL Trigger: GAGGAGAAGCGGGAGGAGTGGAATTCTCTGGAGTCAGGTTTTCATAACACAGTTTTCCTTCCCTGGAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| 3UTR CCA 72 bp | CTGAGAATGGAGCTGGAGAAACCCTACTCTAGTGAGTaGTTAATGGAACAGTTCCCTTCTCATTCCCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LRMELEKPYSSE*LMEQFPSHSPQ Trigger: CTGTGGGGAATGAGAAGGGAACTGTTCCATTAACCACTCACTAGAGTAGGGTTTCTCCAGCTCCATTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| 3UTR-3UTR CAA 90 bp | CTCATCCACGTGAGAACAGCAGGCAACAAGCAGGCTGATAACAGAATCCAGACAGTCTCCAGGATATTTTaGATACAGCATTCAGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LIHVRTAGNKQADNRIQTVSRIF*IQHSGF Trigger: AAAGCCTGAATGCTGTATCAAAAATATCCTGGAGAC...TGTCTGGATTCTGTTATCAGCCTGCTTGTTGCCTGCTGTTCTCACGTGGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTACACTCATGTGAAGGTCAGAGGACAGCTCACAGAATCCGTTCTGTACTTCTTCTACCTCAGCTTCTaGAATGCAGAAAGTACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VYTHVKVRGQLTESVLYFFYLSF*NAESTS Trigger: ACTTGTACTTTCTGCATTCAAGAAGCTGAGGTAGAA...GAAGTACAGAACGGATTCTGTGAGCTGTCCTCTGACCTTCACATGAGTGTACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR-3UTR CAA 90 bp | CACTTGCTGACAGAACACCATGTAAGGGAGAGTTTTGAAAAGCCAATTCCTTACCCTCAGATCTCCACATaGAAGCCTAACCTCTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: HLLTEHHVRESFEKPIPYPQIST*KPNLCY Trigger: GTAACAGAGGTTAGGCTTCAATGTGGAGATCTGAGG...GTAAGGAATTGGCTTTTCAAAACTCTCCCTTACATGGTGTTCTGTCAGCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| 3UTR TCA 72 bp | GTGGAGGTGGTAGGAGCAAAAAGCACTCTTGATAACTaGGCCATCTCTCCAGTCTCCAGGATATTTTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: VEVVGAKSTLDN*AISPVSRIFLI Trigger: TATCAAAAATATCCTGGAGACTGGAGAGATGGCTCAGTTATCAAGAGTGCTTTTTGCTCCTACCACCTCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| 3UTR GCA 72 bp | TCAGTAGTTAGGCGTCTAATACACATTTCCTCATTCTaGCCAAGGCACGATGAATCTGAGCCAAATAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: SVVRRLIHISSF*PRHDESEPNNA Trigger: GGCATTATTTGGCTCAGATTCATCGTGCCTTGGGCAGAATGAGGAAATGTGTATTAGACGCCTAACTACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR CCA 72 bp | ATTCCCCACAGAGCCACTCAAAGTATTGTTTGTTCCTaGGCTTGTACCATTGCTTTTGTGACAGTTACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IPHRATQSIVCS*ACTIAFVTVTL Trigger: CAGAGTAACTGTCACAAAAGCAATGGTACAAGCCCAGGAACAAACAATACTTTGAGTGGCTCTGTGGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| 3UTR TCA 72 bp | CCCATGTCACAGCCATCAAAGACAACCAAATCAGTATaGACCTCAGTAGTTAGGCGTCTAATACACATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PMSQPSKTTKSV*TSVVRRLIHIS Trigger: GGAAATGTGTATTAGACGCCTAACTACTGAGGTTCATACTGATTTGGTTGTCTTTGATGGCTGTGACATGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR TCA 72 bp | TCCATTGCATTTTATTTACTTTGTGTTTGTGGTGTGTaGTTGTGGGGTGTGTGTGTGTGTGTGTGTGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: SIAFYLLCVCGV*LWGVCVCVCVH Trigger: GTGTACACACACACACACACACACACCCCACAATCACACACCACAAACACAAAGTAAATAAAATGCAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR TCA 72 bp | GTCCATGATCCTTTCCATAATAGATCTAGGCTGCCCTaGGAATCTCCGGTTATAATCATTAACATCTTGACG | + |
|
Preference number: 3 (lower is better) Translates to: VHDPFHNRSRLP*ESPVIIINILT Trigger: CGTCAAGATGTTAATGATTATAACCGGAGATTCTCAGGGCAGCCTAGATCTATTATGGAAAGGATCATGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124757.8 |
||
| 3UTR TCA 72 bp | CCAATTCCTTACATAATAAGCAGGAGTTTAAATCAGTaGTGGTGTAGCATCCCTACAAAGGAAGGGGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: PIPYIISRSLNQ*WCSIPTKEGDC Trigger: ACAATCCCCTTCCTTTGTAGGGATGCTACACCATCACTGATTTAAACTCCTGCTTATTATGTAAGGAATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| 3UTR TCA 72 bp | TCACTTGCTGACAGAACACCATGTAAGGGAGAGTTTTaGAAAGCCAATTCCTTACATAATAAGCAGGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLADRTPCKGEF*KANSLHNKQEF Trigger: AAACTCCTGCTTATTATGTAAGGAATTGGCTTTTCAAAACTCTCCCTTACATGGTGTTCTGTCAGCAAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTTATGTTCCTGGGACAAAATCATTTCCCTTTACAAGCTACTCTATTTTCCTAATGAAAAAGCAGAGTaGCTCCAAGTCCATAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: YLCSWDKIISLYKLLYFPNEKAE*LQVHRA Trigger: AGCTCTATGGACTTGGAGCAACTCTGCTTTTTCATT...AGGAAAATAGAGTAGCTTGTAAAGGGAAATGATTTTGTCCCAGGAACATAAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR-3UTR CAA 90 bp | TACTTATGTTCCTGGGACAAAATCATTTCCCTTTACAAGCTACTCTATTTTCCTTTATTTACTTTGTGTTaGTGGTGTGTGATTGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: YLCSWDKIISLYKLLYFPLFTLC*WCVIVG Trigger: CCCCACAATCACACACCACAAACACAAAGTAAATAA...AGGAAAATAGAGTAGCTTGTAAAGGGAAATGATTTTGTCCCAGGAACATAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR GCA 72 bp | CTTTCTATGATGTTTAAAGCACTGATAGACTCTACTTaGTTTGAAGACTTTCTCAAATTGCTGCTGCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSMMFKALIDST*FEDFLKLLLHS Trigger: TGAATGCAGCAGCAATTTGAGAAAGTCTTCAAAGCAAGTAGAGTCTATCAGTGCTTTAAACATCATAGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| CDS-3UTR TCA 90 bp | GGTTGTCAGGCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGCGGTCAACGCCAAGCTaGCCACCACAGCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCQAWEQAPFPTALLLVWRSTPS*PPQPQG Trigger: TCCTTGTGGCTGTGGTGGTCAGCTTGGCGTTGACCG...CCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR TCA 90 bp | AACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCCTGAACGCATGTCTCAGCCGGTCAACGCCAAGCTaGCCACCACAGCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NIQKRPPTENTSLNACLSRSTPS*PPQPQG Trigger: TCCTTGTGGCTGTGGTGGTCAGCTTGGCGTTGACCG...GCTGAGACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| 3UTR CAA 72 bp | GAATCCGTTCTGTACTTCCATGATGTGAGACCCAGGTaGTCAGGCTTGGGAGCAAGCACCTTTCCCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESVLYFHDVRPR*SGLGASTFPHC Trigger: GCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACCTGGGTCTCACATCATGGAAGTACAGAACGGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGGTAGGATCTGTTCTCGAAGCACTCTaGCTAGCTCCTGGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWEQAPFPTALLLVWVGSVLEAL*LAPGFL Trigger: CAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAAC...AGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR TCA 90 bp | GGTTGTCAGGCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGACAGGAAAGGAGGCTTaGTGTAAGCAGATTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GCQAWEQAPFPTALLLVWTGKEA*CKQIGQ Trigger: CTGTCCAATCTGCTTACATCAAGCCTCCTTTCCTGT...CCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR TCA 90 bp | GGTTGTCAGGCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGAGATCTAGGCTGCCCTaGGAATCTCCGGTTATAATC | + |
|
Preference number: 4 (lower is better) Translates to: GCQAWEQAPFPTALLLVWRSRLP*ESPVII Trigger: GATTATAACCGGAGATTCTCAGGGCAGCCTAGATCT...CCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| CDS-3UTR CCA 90 bp | GGTTGTCAGGCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGACAGCCACAAGGACTTaGTCGCTCACTCCTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: GCQAWEQAPFPTALLLVWTATRT*SLTPSI Trigger: TATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGT...CCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR CAA 72 bp | GCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTaGGTTTGGGTAGGATCTCACTCTTTAGCTCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWEQAPFPTALL*VWVGSHSLAQA Trigger: AGCTTGAGCTAAAGAGTGAGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR TCA 90 bp | TTTCTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGCGGTCAACGCCAAGCTaGCCACCACAGCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLAEGDSEFLTFLPFSTERSTPS*PPQPQG Trigger: TCCTTGTGGCTGTGGTGGTCAGCTTGGCGTTGACCG...CTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR TCA 90 bp | ATGCGGAACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCCTGAACGCATGTGTTCTCGAAGCACTCTaGCTAGCTCCTGGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MRNIQKRPPTENTSLNACVLEAL*LAPGFL Trigger: CAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAAC...ACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR TCA 90 bp | CAAAAATGTCTTTTCATGCATGAAATTCTTACTCCAGGTGGCAGTGGCTCCTGCCGGTCAACGCCAAGCTaGCCACCACAGCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKCLFMHEILTPGGSGSCRSTPS*PPQPQG Trigger: TCCTTGTGGCTGTGGTGGTCAGCTTGGCGTTGACCG...GCAGGAGCCACTGCCACCTGGAGTAAGAATTTCATGCATGAAAAGACATTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS-3UTR TCA 90 bp | ATGCGGAACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCCTGAACGCATGTACAGGAAAGGAGGCTTaGTGTAAGCAGATTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: MRNIQKRPPTENTSLNACTGKEA*CKQIGQ Trigger: CTGTCCAATCTGCTTACATCAAGCCTCCTTTCCTGT...ACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR CCA 90 bp | AACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCCTGAACGCATGTCTCAGCACAGCCACAAGGACTTaGTCGCTCACTCCTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: NIQKRPPTENTSLNACLSTATRT*SLTPSI Trigger: TATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGT...GCTGAGACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR CCA 90 bp | CACTGCACTCCAGAGGCAGAGGCAGATGAATCTCAATTCCAGGCCAGTCTAGTCACAGCCACAAGGACTTaGTCGCTCACTCCTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: HCTPEAEADESQFQASLVTATRT*SLTPSI Trigger: TATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGT...GACTAGACTGGCCTGGAATTGAGATTCATCTGCCTCTGCCTCTGGAGTGCAGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCAAAATCGTACCCATTACTACTTGTTCCCAAGGTTACTTATGTTCCTGGGCGGTCAACGCCAAGCTaGCCACCACAGCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYPLLLVPKVTYVPGRSTPS*PPQPQG Trigger: TCCTTGTGGCTGTGGTGGTCAGCTTGGCGTTGACCG...CCCAGGAACATAAGTAACCTTGGGAACAAGTAGTAATGGGTACGATTTTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAGTCTAGTCTACCAAGCAAGTTCCAGGACAGCTAGAGCTACACAGAGAACAGGAAAGGAGGCTTaGTGTAAGCAGATTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QASLVYQASSRTARATQRTGKEA*CKQIGQ Trigger: CTGTCCAATCTGCTTACATCAAGCCTCCTTTCCTGT...TCTCTGTGTAGCTCTAGCTGTCCTGGAACTTGCTTGGTAGACTAGACTGGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS-3UTR GCA 90 bp | GCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGGTAGGATCTTACATTTCTGAGAAGTaGATACAGGAGAGTAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AWEQAPFPTALLLVWVGSYISEK*IQESSG Trigger: ACCGCTACTCTCCTGTATGCACTTCTCAGAAATGTA...AGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR GCA 90 bp | CGGAACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCCTGAACGCATGTCTCTACATTTCTGAGAAGTaGATACAGGAGAGTAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RNIQKRPPTENTSLNACLYISEK*IQESSG Trigger: ACCGCTACTCTCCTGTATGCACTTCTCAGAAATGTA...GAGACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR CCA 90 bp | GGTTGTCAGGCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGACATCCTGTTCTGTTTaGAATTGTTCTCGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GCQAWEQAPFPTALLLVWTSCSV*NCSRST Trigger: AGTGCTTCGAGAACAATTCCAAACAGAACAGGATGT...CCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR TCA 90 bp | CACTGCACTCCAGAGGCAGAGGCAGATGAATCTCAATTCCAGGCCAGTCTAGTCCACTCCTTCTATAAATaGGTCATCCTGCTGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: HCTPEAEADESQFQASLVHSFYK*VILLQT Trigger: AGTTTGCAGCAGGATGACTCATTTATAGAAGGAGTG...GACTAGACTGGCCTGGAATTGAGATTCATCTGCCTCTGCCTCTGGAGTGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS-3UTR TCA 90 bp | AGCATTATCCTAATGCGGAACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCACAGGAAAGGAGGCTTaGTGTAAGCAGATTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SIILMRNIQKRPPTENTSTGKEA*CKQIGQ Trigger: CTGTCCAATCTGCTTACATCAAGCCTCCTTTCCTGT...GGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCGCATTAGGATAATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR GCA 90 bp | CGGAACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCCTGAACGCATGTCTCTCTGGATGGATGTTCTaGTGTACATTTCTGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RNIQKRPPTENTSLNACLSGWMF*CTFLRS Trigger: ACTTCTCAGAAATGTACAGCAGAACATCCATCCAGA...GAGACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTACACTCATGTGAAGGTCAGAGGACAGCTCACAGAATCCGTTCTGTACGATAGGACAACTGATTaGACCAAGCCAGGACCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: CVYTHVKVRGQLTESVLYDRTTD*TKPGPV Trigger: TACGGGTCCTGGCTTGGTGCAATCAGTTGTCCTATC...GTACAGAACGGATTCTGTGAGCTGTCCTCTGACCTTCACATGAGTGTACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| CDS-3UTR GCA 90 bp | TTTCTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGCAAGCCCAAGGCTTCTaGATGATAGCCAGGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLAEGDSEFLTFLPFSTEQAQGF*MIARHS Trigger: AGAGTGCCTGGCTATCATGCAGAAGCCTTGGGCTTG...CTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGGTAGGATCTCACCTAGTTAGTCTTTaGGTTATCACTTCTCGATAC | + |
|
Preference number: 4 (lower is better) Translates to: AWEQAPFPTALLLVWVGSHLVSL*VITSRY Trigger: GTATCGAGAAGTGATAACCCAAAGACTAACTAGGTG...AGATCCTACCCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| CDS-3UTR TCA 90 bp | GTCCATGATCCTTTCCATAATCTGTGTATTACAGGAAAAAGCTGTTACACCTTCCGGTCAACGCCAAGCTaGCCACCACAGCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHDPFHNLCITGKSCYTFRSTPS*PPQPQG Trigger: TCCTTGTGGCTGTGGTGGTCAGCTTGGCGTTGACCG...GAAGGTGTAACAGCTTTTTCCTGTAATACACAGATTATGGAAAGGATCATGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124867.3 |
||
| CDS-3UTR TCA 90 bp | TTTCTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGGTTCTCGAAGCACTCTaGCTAGCTCCTGGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLAEGDSEFLTFLPFSTEVLEAL*LAPGFL Trigger: CAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAAC...CTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR GCA 90 bp | AACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCCTGAACGCATGTCTCAGCTCTGGATGGATGTTCTaGTGTACATTTCTGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NIQKRPPTENTSLNACLSSGWMF*CTFLRS Trigger: ACTTCTCAGAAATGTACAGCAGAACATCCATCCAGA...GCTGAGACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR CCA 90 bp | CACTGCACTCCAGAGGCAGAGGCAGATGAATCTCAATTCCAGGCCAGTCTAGTCACATCCTGTTCTGTTTaGAATTGTTCTCGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: HCTPEAEADESQFQASLVTSCSV*NCSRST Trigger: AGTGCTTCGAGAACAATTCCAAACAGAACAGGATGT...GACTAGACTGGCCTGGAATTGAGATTCATCTGCCTCTGCCTCTGGAGTGCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS-3UTR CCA 90 bp | CACTGCACTCCAGAGGCAGAGGCAGATGAATCTCAATTCCAGGCCAGTCTAGTCTGTATCTTGTTGTCTTaGAAACGCCAATATCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HCTPEAEADESQFQASLVCILLS*KRQYLC Trigger: GCAAAGATATTGGCGTTTCCAAGACAACAAGATACA...GACTAGACTGGCCTGGAATTGAGATTCATCTGCCTCTGCCTCTGGAGTGCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGCATTATCCTAATGCGGAACATCCAGAAGAGGCCCCCAACTGAGAACACAGCCACAAGGACTTaGTCGCTCACTCCTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: KQSIILMRNIQKRPPTENTATRT*SLTPSI Trigger: TATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGT...GTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCGCATTAGGATAATGCTTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR TCA 90 bp | GTGTACACTCATGTGAAGGTCAGAGGACAGCTCACAGAATCCGTTCTGTACTTCCACTCCTTCTATAAATaGGTCATCCTGCTGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VYTHVKVRGQLTESVLYFHSFYK*VILLQT Trigger: AGTTTGCAGCAGGATGACTCATTTATAGAAGGAGTG...GAAGTACAGAACGGATTCTGTGAGCTGTCCTCTGACCTTCACATGAGTGTACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTTTCCACTGAGTACTAGGATTCAGGCATATGCCACGGTACCTGGTAATACAGGAAAGGAGGCTTaGTGTAAGCAGATTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: FLFPLSTRIQAYATVPGNTGKEA*CKQIGQ Trigger: CTGTCCAATCTGCTTACATCAAGCCTCCTTTCCTGT...ATTACCAGGTACCGTGGCATATGCCTGAATCCTAGTACTCAGTGGAAAAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR GCA 90 bp | CTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGTACTACATTTCTGAGAAGTaGATACAGGAGAGTAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAEGDSEFLTFLPFSTEYYISEK*IQESSG Trigger: ACCGCTACTCTCCTGTATGCACTTCTCAGAAATGTA...GTACTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR GCA 90 bp | TCCCATCAAACAAAGCATTATCCTAATGCGGAACATCCAGAAGAGGCCCCCAACTACATTTCTGAGAAGTaGATACAGGAGAGTAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHQTKHYPNAEHPEEAPNYISEK*IQESSG Trigger: ACCGCTACTCTCCTGTATGCACTTCTCAGAAATGTA...GTTGGGGGCCTCTTCTGGATGTTCCGCATTAGGATAATGCTTTGTTTGATGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTCCACTGAGTACTAGGATTCAGGCATATGCCACGGTACCTGGTAATACAGCCACAAGGACTTaGTCGCTCACTCCTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: FLFPLSTRIQAYATVPGNTATRT*SLTPSI Trigger: TATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGT...ATTACCAGGTACCGTGGCATATGCCTGAATCCTAGTACTCAGTGGAAAAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGCACTCCTTCTATAAATaGGTCATCCTGCTGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: FLAEGDSEFLTFLPFSTEHSFYK*VILLQT Trigger: AGTTTGCAGCAGGATGACTCATTTATAGAAGGAGTG...CTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTCAGCAAGGTGGGGAGGTCCATGATCCTTTCCATAATCTGTGTATTACAGCACTCCTTCTATAAATaGGTCATCCTGCTGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: CLSKVGRSMILSIICVLQHSFYK*VILLQT Trigger: AGTTTGCAGCAGGATGACTCATTTATAGAAGGAGTG...CTGTAATACACAGATTATGGAAAGGATCATGGACCTCCCCACCTTGCTGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124867.3 |
||
| CDS-3UTR GCA 90 bp | GTGTACACTCATGTGAAGGTCAGAGGACAGCTCACAGAATCCGTTCTGTACTTCGCCAGTATGCAATTATaGAGGAACCACAAAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VYTHVKVRGQLTESVLYFASMQL*RNHKRD Trigger: ATCTCTTTTGTGGTTCCTGCATAATTGCATACTGGC...GAAGTACAGAACGGATTCTGTGAGCTGTCCTCTGACCTTCACATGAGTGTACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| CDS-3UTR CCA 90 bp | AGCATTATCCTAATGCGGAACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCTGTATCTTGTTGTCTTaGAAACGCCAATATCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIILMRNIQKRPPTENTSCILLS*KRQYLC Trigger: GCAAAGATATTGGCGTTTCCAAGACAACAAGATACA...GGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCGCATTAGGATAATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 |
||
| CDS-3UTR CCA 90 bp | CGCATGTCTCAGCAAGGTGGGGAGGTCCATGATCCTTTCCATAATCTGTGTATTACATCCTGTTCTGTTTaGAATTGTTCTCGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RMSQQGGEVHDPFHNLCITSCSV*NCSRST Trigger: AGTGCTTCGAGAACAATTCCAAACAGAACAGGATGT...AATACACAGATTATGGAAAGGATCATGGACCTCCCCACCTTGCTGAGACATGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124867.3 |
||
| 3UTR CAA 72 bp | CCACTCTTAACTTCATTTGCAAGTATACCCTCGAGATaGATAAAGGCTGTGACGAGTGTTCTTCCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLTSFASIPSR*IKAVTSVLPGA Trigger: AGCTCCAGGAAGAACACTCGTCACAGCCTTTATCAATCTCGAGGGTATACTTGCAAATGAAGTTAAGAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| CDS-3UTR TCA 90 bp | ACTTGCTTTGAAGACTTTCTCAAATTGCTGCTGCATTCATCACTAATGATCCGTGTTCTCGAAGCACTCTaGCTAGCTCCTGGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCFEDFLKLLLHSSLMIRVLEAL*LAPGFL Trigger: CAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAAC...ACGGATCATTAGTGATGAATGCAGCAGCAATTTGAGAAAGTCTTCAAAGCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGTCTACACAGTGAAACACTGTCTCAAAAATGTCTTTTCATGCATGAAAGTTCTCGAAGCACTCTaGCTAGCTCCTGGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPVYTVKHCLKNVFSCMKVLEAL*LAPGFL Trigger: CAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAAC...TTTCATGCATGAAAAGACATTTTTGAGACAGTGTTTCACTGTGTAGACTGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTGTTTCCTCAAAATCGTACCCATTACTACTTGTTCCCAAGGTTACTTATGACAGGAAAGGAGGCTTaGTGTAAGCAGATTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLFPQNRTHYYLFPRLLMTGKEA*CKQIGQ Trigger: CTGTCCAATCTGCTTACATCAAGCCTCCTTTCCTGT...CATAAGTAACCTTGGGAACAAGTAGTAATGGGTACGATTTTGAGGAAACAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGGTGGGGAGGTCCATGATCCTTTCCATAATCTGTGTATTACAGGAAAATACATTTCTGAGAAGTaGATACAGGAGAGTAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QQGGEVHDPFHNLCITGKYISEK*IQESSG Trigger: ACCGCTACTCTCCTGTATGCACTTCTCAGAAATGTA...TTTTCCTGTAATACACAGATTATGGAAAGGATCATGGACCTCCCCACCTTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124867.3 |
||
| CDS-3UTR GCA 90 bp | TTTCTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGTCTGGATGGATGTTCTaGTGTACATTTCTGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLAEGDSEFLTFLPFSTESGWMF*CTFLRS Trigger: ACTTCTCAGAAATGTACAGCAGAACATCCATCCAGA...CTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTCCACTGAGTACTAGGATTCAGGCATATGCCACGGTACCTGGTAATATGCTATTATTTGGGTaGCAACTAGAGCAGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLFPLSTRIQAYATVPGNMLLFG*QLEQDL Trigger: CAAGTCCTGCTCTAGTTGCCACCCAAATAATAGCAT...ATTACCAGGTACCGTGGCATATGCCTGAATCCTAGTACTCAGTGGAAAAAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGCAATATGCTATTATTTaGGTGGCAACTAGAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLAEGDSEFLTFLPFSTEQYAII*VATRAG Trigger: TCCTGCTCTAGTTGCCACCCAAATAATAGCATATTG...CTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGAAGTCGGACATAATTTaGTCACCACAAAAGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FLAEGDSEFLTFLPFSTEKSDII*SPQKRC Trigger: ACATCTCTTTTGTGGTGAGCAAATTATGTCCGACTT...CTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTCCACTGAGTACTAGGATTCAGGCATATGCCACGGTACCTGGTAATTCCTGGTTTTCTGGATaGATGTTCTGCTGTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: FLFPLSTRIQAYATVPGNSWFSG*MFCCTF Trigger: AAATGTACAGCAGAACATCCATCCAGAAAACCAGGA...ATTACCAGGTACCGTGGCATATGCCTGAATCCTAGTACTCAGTGGAAAAAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGGTGGGGAGGTCCATGATCCTTTCCATAATCTGTGTATTACAGGAAAATCCTGGTTTTCTGGATaGATGTTCTGCTGTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: QQGGEVHDPFHNLCITGKSWFSG*MFCCTF Trigger: AAATGTACAGCAGAACATCCATCCAGAAAACCAGGA...TTTTCCTGTAATACACAGATTATGGAAAGGATCATGGACCTCCCCACCTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124867.3 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTCCACTGAGTACTAGGATTCAGGCATATGCCACGGTACCTGGTAATACATCCTGTTCTGTTTaGAATTGTTCTCGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLFPLSTRIQAYATVPGNTSCSV*NCSRST Trigger: AGTGCTTCGAGAACAATTCCAAACAGAACAGGATGT...ATTACCAGGTACCGTGGCATATGCCTGAATCCTAGTACTCAGTGGAAAAAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR TCA 90 bp | TCCATAATCTGTGTATTACAGGAAAAAGCTGTTACACCTTCTGCACCATTATTAGTTCTCGAAGCACTCTaGCTAGCTCCTGGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIICVLQEKAVTPSAPLLVLEAL*LAPGFL Trigger: CAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAAC...TAATAATGGTGCAGAAGGTGTAACAGCTTTTTCCTGTAATACACAGATTATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124867.3 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGTCCATGATCCTTTCCATAATCTGTGTATTACAGGAAAAAGCTGTTACTCTGGATGGATGTTCTaGTGTACATTTCTGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GEVHDPFHNLCITGKSCYSGWMF*CTFLRS Trigger: ACTTCTCAGAAATGTACAGCAGAACATCCATCCAGA...GTAACAGCTTTTTCCTGTAATACACAGATTATGGAAAGGATCATGGACCTCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124867.3 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTCCACTGAGTACTAGGATTCAGGCATATGCCACGGTACCTGGTAATTGTATCTTGTTGTCTTaGAAACGCCAATATCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFPLSTRIQAYATVPGNCILLS*KRQYLC Trigger: GCAAAGATATTGGCGTTTCCAAGACAACAAGATACA...ATTACCAGGTACCGTGGCATATGCCTGAATCCTAGTACTCAGTGGAAAAAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGTGGGGAGGTCCATGATCCTTTCCATAATCTGTGTATTACAGGAAAAATCCTGGTTTTCTGGATaGATGTTCTGCTGTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: SKVGRSMILSIICVLQEKSWFSG*MFCCTF Trigger: AAATGTACAGCAGAACATCCATCCAGAAAACCAGGA...TTTTTCCTGTAATACACAGATTATGGAAAGGATCATGGACCTCCCCACCTTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124867.3 |
||
| CDS-3UTR CCA 90 bp | CACTTGCTGACAGAACACCATGTAAGGGAGAGTTTTGAAAAGCCAATTCCTTACTCCTGGTTTTCTGGATaGATGTTCTGCTGTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: HLLTEHHVRESFEKPIPYSWFSG*MFCCTF Trigger: AAATGTACAGCAGAACATCCATCCAGAAAACCAGGA...GTAAGGAATTGGCTTTTCAAAACTCTCCCTTACATGGTGTTCTGTCAGCAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS-3UTR GCA 90 bp | CTTATGTTCCTGGGACAAAATCATTTCCCTTTACAAGCTACTCTATTTTCCTTTCCCGTATCGCCAGTATaGAATTATGCAGGAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: LMFLGQNHFPLQATLFSFPVSPV*NYAGTT Trigger: TGTGGTTCCTGCATAATTGCATACTGGCGATACGGG...AAAGGAAAATAGAGTAGCTTGTAAAGGGAAATGATTTTGTCCCAGGAACATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| CDS-3UTR GCA 90 bp | ACTTGCTTTGAAGACTTTCTCAAATTGCTGCTGCATTCATCACTAATGATCCGTATAATAGATCTAGGCTaGCCTGAGAATCTCCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TCFEDFLKLLLHSSLMIRIIDLG*PENLRL Trigger: TAACCGGAGATTCTCAGGGCAGCCTAGATCTATTAT...ACGGATCATTAGTGATGAATGCAGCAGCAATTTGAGAAAGTCTTCAAAGCAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| CDS-3UTR CCA 90 bp | TACTTATGTTCCTGGGACAAAATCATTTCCCTTTACAAGCTACTCTATTTTCCTACAGCCACAAGGACTTaGTCGCTCACTCCTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: YLCSWDKIISLYKLLYFPTATRT*SLTPSI Trigger: TATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGT...AGGAAAATAGAGTAGCTTGTAAAGGGAAATGATTTTGTCCCAGGAACATAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR CCA 90 bp | AGCCTGTTTCCTCAAAATCGTACCCATTACTACTTGTTCCCAAGGTTACTTATGACATCCTGTTCTGTTTaGAATTGTTCTCGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLFPQNRTHYYLFPRLLMTSCSV*NCSRST Trigger: AGTGCTTCGAGAACAATTCCAAACAGAACAGGATGT...CATAAGTAACCTTGGGAACAAGTAGTAATGGGTACGATTTTGAGGAAACAGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| 3UTR CAA 72 bp | TCTAACTGTAATGTCTTGAAAGGCCAAAACCTTCACTaGCTGACAGAACACCATGTAAGGGAGAGTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNCNVLKGQNLH*LTEHHVRESFE Trigger: TTCAAAACTCTCCCTTACATGGTGTTCTGTCAGCAAGTGAAGGTTTTGGCCTTTCAAGACATTACAGTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCAGTCTACACAGTGAAACACTGTCTCAAAAATGTCTTTTCATGCATGAAATCTGGATGGATGTTCTaGTGTACATTTCTGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPVYTVKHCLKNVFSCMKSGWMF*CTFLRS Trigger: ACTTCTCAGAAATGTACAGCAGAACATCCATCCAGA...TTTCATGCATGAAAAGACATTTTTGAGACAGTGTTTCACTGTGTAGACTGGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGTTTCCTCAAAATCGTACCCATTACTACTTGTTCCCAAGGTTACTTATGTGTATCTTGTTGTCTTaGAAACGCCAATATCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLFPQNRTHYYLFPRLLMCILLS*KRQYLC Trigger: GCAAAGATATTGGCGTTTCCAAGACAACAAGATACA...CATAAGTAACCTTGGGAACAAGTAGTAATGGGTACGATTTTGAGGAAACAGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR CCA 90 bp | ACTTGCTTTGAAGACTTTCTCAAATTGCTGCTGCATTCATCACTAATGATCCGTTCCTGGTTTTCTGGATaGATGTTCTGCTGTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: TCFEDFLKLLLHSSLMIRSWFSG*MFCCTF Trigger: AAATGTACAGCAGAACATCCATCCAGAAAACCAGGA...ACGGATCATTAGTGATGAATGCAGCAGCAATTTGAGAAAGTCTTCAAAGCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014022.15 |
||
| CDS-3UTR TCA 90 bp | CCAGAATTCCAAACAAGGCTTCAGGTACAAAATCTAGAGGTGATATTAAATAGACACTCCTTCTATAAATaGGTCATCCTGCTGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PEFQTRLQVQNLEVILNRHSFYK*VILLQT Trigger: AGTTTGCAGCAGGATGACTCATTTATAGAAGGAGTG...TCTATTTAATATCACCTCTAGATTTTGTACCTGAAGCCTTGTTTGGAATTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR GCA 90 bp | TACTTATGTTCCTGGGACAAAATCATTTCCCTTTACAAGCTACTCTATTTTCCTTCTGGATGGATGTTCTaGTGTACATTTCTGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YLCSWDKIISLYKLLYFPSGWMF*CTFLRS Trigger: ACTTCTCAGAAATGTACAGCAGAACATCCATCCAGA...AGGAAAATAGAGTAGCTTGTAAAGGGAAATGATTTTGTCCCAGGAACATAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR CCA 90 bp | CCAGAATTCCAAACAAGGCTTCAGGTACAAAATCTAGAGGTGATATTAAATAGATCCTGGTTTTCTGGATaGATGTTCTGCTGTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: PEFQTRLQVQNLEVILNRSWFSG*MFCCTF Trigger: AAATGTACAGCAGAACATCCATCCAGAAAACCAGGA...TCTATTTAATATCACCTCTAGATTTTGTACCTGAAGCCTTGTTTGGAATTCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAATTCCAAACAAGGCTTCAGGTACAAAATCTAGAGGTGATATTAAATAGAACATCCTGTTCTGTTTaGAATTGTTCTCGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PEFQTRLQVQNLEVILNRTSCSV*NCSRST Trigger: AGTGCTTCGAGAACAATTCCAAACAGAACAGGATGT...TCTATTTAATATCACCTCTAGATTTTGTACCTGAAGCCTTGTTTGGAATTCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR CCA 90 bp | TACTTATGTTCCTGGGACAAAATCATTTCCCTTTACAAGCTACTCTATTTTCCTTGTATCTTGTTGTCTTaGAAACGCCAATATCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLCSWDKIISLYKLLYFPCILLS*KRQYLC Trigger: GCAAAGATATTGGCGTTTCCAAGACAACAAGATACA...AGGAAAATAGAGTAGCTTGTAAAGGGAAATGATTTTGTCCCAGGAACATAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR CAA 90 bp | GGTTGTCAGGCTTGGGAGCAAGCACCTTTCCCCACTGCCCTGCTTTTGGTTTGGCACAGCCACAAGGACTaGGTCGCTCACTCCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: GCQAWEQAPFPTALLLVWHSHKD*VAHSFY Trigger: ATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGTG...CCAAACCAAAAGCAGGGCAGTGGGGAAAGGTGCTTGCTCCCAAGCCTGACAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR CAA 90 bp | CGGAACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCCTGAACGCATGTCTCCACAGCCACAAGGACTaGGTCGCTCACTCCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: RNIQKRPPTENTSLNACLHSHKD*VAHSFY Trigger: ATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGTG...GAGACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR CAA 90 bp | CACTGCACTCCAGAGGCAGAGGCAGATGAATCTCAATTCCAGGCCAGTCTAGTCCACAGCCACAAGGACTaGGTCGCTCACTCCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: HCTPEAEADESQFQASLVHSHKD*VAHSFY Trigger: ATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGTG...GACTAGACTGGCCTGGAATTGAGATTCATCTGCCTCTGCCTCTGGAGTGCAGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS TCA 90 bp | GACCACCACAGCCACAAGGACTTGGTCGCTCACTCCTTCTATAAATaGGTCATCCTGCTGCAAACTCTGACCTTCACTGTAGTACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DHHSHKDLVAHSFYK*VILLQTLTFTVVPG Trigger: GCCAGGTACTACAGTGAAGGTCAGAGTTTGCAGCAGGATGACTCATTTATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGTGGTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000014022.15 ENSMUST00000110575.8 ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000140819.8 ENSMUST00000209300.2 ENSMUST00000209707.2 |
||
| CDS GCA 90 bp | CTCCTGGTTTTCTGGATGGATGTTCTGCTGTACATTTCTGAGAAGTaGATACAGGAGAGTAGCGGTCAACGCCAAGCTGACCACCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLVFWMDVLLYISEK*IQESSGQRQADHHS Trigger: GCTGTGGTGGTCAGCTTGGCGTTGACCGCTACTCTCCTGTATGCACTTCTCAGAAATGTACAGCAGAACATCCATCCAGAAAACCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014022.15 ENSMUST00000110575.8 ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 ENSMUST00000140819.8 ENSMUST00000209300.2 ENSMUST00000209707.2 |
||
| CDS-3UTR CAA 90 bp | GTGCACACATGCATGGAGGTGCCCGAGCAGGCCAGAAGAAGACAGCAGATCCCTCATATATCTTGTATCTaGTTGTCTTGGAAACGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VHTCMEVPEQARRRQQIPHISCI*LSWKRQ Trigger: TTGGCGTTTCCAAGACAACAAGATACAAGATATATG...AGGGATCTGCTGTCTTCTTCTGGCCTGCTCGGGCACCTCCATGCATGTGTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGTACCACAGCCACAAGGACTaGGTCGCTCACTCCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LAEGDSEFLTFLPFSTEYHSHKD*VAHSFY Trigger: ATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGTG...GTACTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CAA 90 bp | AGAGACAGGAGTGATCTTTCTCATCCACGTGAGAACAGCAGGCAACAAGCAGGCAGAGATGTCCACAGTTaGTTTCAACAGGAAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RDRSDLSHPRENSRQQAGRDVHS*FQQERR Trigger: CCTCCTTTCCTGTTGAAACAAACTGTGGACATCTCT...GCCTGCTTGTTGCCTGCTGTTCTCACGTGGATGAGAAAGATCACTCCTGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS GCA 90 bp | TCTCGAAGCACTCTGACTAGCTCCTGGTTTTCTGGATGGATGTTCTaGTGTACATTTCTGAGAAGTGCATACAGGAGAGTAGCGGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRSTLTSSWFSGWMF*CTFLRSAYRRVAVN Trigger: GTTGACCGCTACTCTCCTGTATGCACTTCTCAGAAATGTACAGCAGAACATCCATCCAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014022.15 ENSMUST00000110575.8 ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 ENSMUST00000140819.8 ENSMUST00000209300.2 ENSMUST00000209707.2 |
||
| CDS-3UTR CAA 90 bp | CGGAACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCCTGAACGCATGTCTCCATATATCTTGTATCTaGTTGTCTTGGAAACGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RNIQKRPPTENTSLNACLHISCI*LSWKRQ Trigger: TTGGCGTTTCCAAGACAACAAGATACAAGATATATG...GAGACATGCGTTCAGGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCCATCAAACAAAGCATTATCCTAATGCGGAACATCCAGAAGAGGCCCCCGACATCCTGTTCTGTTaGGAATTGTTCTCGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSHQTKHYPNAEHPEEAPDILFC*ELFSKH Trigger: GTGCTTCGAGAACAATTCCAAACAGAACAGGATGTC...GGGGGCCTCTTCTGGATGTTCCGCATTAGGATAATGCTTTGTTTGATGGGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR CAA 90 bp | AGCATTATCCTAATGCGGAACATCCAGAAGAGGCCCCCAACTGAGAACACTTCCAGAGATGTCCACAGTTaGTTTCAACAGGAAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SIILMRNIQKRPPTENTSRDVHS*FQQERR Trigger: CCTCCTTTCCTGTTGAAACAAACTGTGGACATCTCT...GGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCGCATTAGGATAATGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 |
||
| CDS-3UTR CAA 90 bp | GTGTACACTCATGTGAAGGTCAGAGGACAGCTCACAGAATCCGTTCTGTACTTCGACATCCTGTTCTGTTaGGAATTGTTCTCGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VYTHVKVRGQLTESVLYFDILFC*ELFSKH Trigger: GTGCTTCGAGAACAATTCCAAACAGAACAGGATGTC...GAAGTACAGAACGGATTCTGTGAGCTGTCCTCTGACCTTCACATGAGTGTACAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGTACGACATCCTGTTCTGTTaGGAATTGTTCTCGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAEGDSEFLTFLPFSTEYDILFC*ELFSKH Trigger: GTGCTTCGAGAACAATTCCAAACAGAACAGGATGTC...GTACTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTACACTCATGTGAAGGTCAGAGGACAGCTCACAGAATCCGTTCTGTACGACATCCTGTTCTGTTaGGAATTGTTCTCGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CVYTHVKVRGQLTESVLYDILFC*ELFSKH Trigger: GTGCTTCGAGAACAATTCCAAACAGAACAGGATGTC...GTACAGAACGGATTCTGTGAGCTGTCCTCTGACCTTCACATGAGTGTACACACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTACACTCATGTGAAGGTCAGAGGACAGCTCACAGAATCCGTTCTGTACAGAGATGTCCACAGTTaGTTTCAACAGGAAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVYTHVKVRGQLTESVLYRDVHS*FQQERR Trigger: CCTCCTTTCCTGTTGAAACAAACTGTGGACATCTCT...GTACAGAACGGATTCTGTGAGCTGTCCTCTGACCTTCACATGAGTGTACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGTACAGAGATGTCCACAGTTaGTTTCAACAGGAAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAEGDSEFLTFLPFSTEYRDVHS*FQQERR Trigger: CCTCCTTTCCTGTTGAAACAAACTGTGGACATCTCT...GTACTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CAA 90 bp | CGCATGTCTCAGCAAGGTGGGGAGGTCCATGATCCTTTCCATAATCTGTGTATTAGAGATGTCCACAGTTaGTTTCAACAGGAAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RMSQQGGEVHDPFHNLCIRDVHS*FQQERR Trigger: CCTCCTTTCCTGTTGAAACAAACTGTGGACATCTCT...AATACACAGATTATGGAAAGGATCATGGACCTCCCCACCTTGCTGAGACATGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124867.3 |
||
| CDS-3UTR CAA 90 bp | AGCCTGTTTCCTCAAAATCGTACCCATTACTACTTGTTCCCAAGGTTACTTATGCACAGCCACAAGGACTaGGTCGCTCACTCCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SLFPQNRTHYYLFPRLLMHSHKD*VAHSFY Trigger: ATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCTGTG...CATAAGTAACCTTGGGAACAAGTAGTAATGGGTACGATTTTGAGGAAACAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR CAA 90 bp | TCTCAGCAAGGTGGGGAGGTCCATGATCCTTTCCATAATCTGTGTATTACAGGAAGAGATGTCCACAGTTaGTTTCAACAGGAAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQQGGEVHDPFHNLCITGRDVHS*FQQERR Trigger: CCTCCTTTCCTGTTGAAACAAACTGTGGACATCTCT...TCCTGTAATACACAGATTATGGAAAGGATCATGGACCTCCCCACCTTGCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110579.10 ENSMUST00000124867.3 |
||
| CDS CCA 90 bp | TGGAATTGTTCTCGAAGCACTCTGACTAGCTCCTGGTTTTCTGGATaGATGTTCTGCTGTACATTTCTGAGAAGTGCATACAGGAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: WNCSRSTLTSSWFSG*MFCCTFLRSAYRRV Trigger: TACTCTCCTGTATGCACTTCTCAGAAATGTACAGCAGAACATCCATCCAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAACAATTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014022.15 ENSMUST00000110575.8 ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 ENSMUST00000140819.8 ENSMUST00000209300.2 ENSMUST00000209707.2 |
||
| CDS CCA 90 bp | TCCTGTTCTGTTTGGAATTGTTCTCGAAGCACTCTGACTAGCTCCTaGTTTTCTGGATGGATGTTCTGCTGTACATTTCTGAGAAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCSVWNCSRSTLTSS*FSGWMFCCTFLRSA Trigger: TGCACTTCTCAGAAATGTACAGCAGAACATCCATCCAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAACAATTCCAAACAGAACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014022.15 ENSMUST00000110575.8 ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 ENSMUST00000140819.8 ENSMUST00000209300.2 ENSMUST00000209707.2 |
||
| CDS GCA 90 bp | CACAAAGGTCTCAAGCTGGTGACTCTAACCAAGTCGGACATAATTTaGTCACCACAAAAGAGATGTCCACAGTTTGTTTCAACAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HKGLKLVTLTKSDII*SPQKRCPQFVSTGK Trigger: CTTTCCTGTTGAAACAAACTGTGGACATCTCTTTTGTGGTGAGCAAATTATGTCCGACTTGGTTAGAGTCACCAGCTTGAGACCTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTAGCTGAGGGTGACTCTGAATTCCTGACCTTCCTTCCTTTTTCCACTGAGCATATATCTTGTATCTaGTTGTCTTGGAAACGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FLAEGDSEFLTFLPFSTEHISCI*LSWKRQ Trigger: TTGGCGTTTCCAAGACAACAAGATACAAGATATATG...CTCAGTGGAAAAAGGAAGGAAGGTCAGGAATTCAGAGTCACCCTCAGCTAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGGCCAGTCTACACAGTGAAACACTGTCTCAAAAATGTCTTTTCATGCATGGACATCCTGTTCTGTTaGGAATTGTTCTCGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LRPVYTVKHCLKNVFSCMDILFC*ELFSKH Trigger: GTGCTTCGAGAACAATTCCAAACAGAACAGGATGTC...CATGCATGAAAAGACATTTTTGAGACAGTGTTTCACTGTGTAGACTGGCCTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209300.2 |
||
| CDS CCA 90 bp | TCCTCAGACCTTAGTATGGAATACACTAAACAATATGCTATTATTTaGGTGGCAACTAGAGCAGGACTTGTGAAGCAATCTACTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSDLSMEYTKQYAII*VATRAGLVKQSTLL Trigger: GAGAAGAGTAGATTGCTTCACAAGTCCTGCTCTAGTTGCCACCCAAATAATAGCATATTGTTTAGTGTATTCCATACTAAGGTCTGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGCCACAGCTGGCTACAAGTTACTTTTGTATGTGTTTCTATAAAAAGTCCCATATATCTTGTATCTaGTTGTCTTGGAAACGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KLPQLATSYFCMCFYKKSHISCI*LSWKRQ Trigger: TTGGCGTTTCCAAGACAACAAGATACAAGATATATG...GGACTTTTTATAGAAACACATACAAAAGTAACTTGTAGCCAGCTGTGGCAGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014022.15 ENSMUST00000110579.10 |
||
| CDS-3UTR CAA 90 bp | TCCATAATCTGTGTATTACAGGAAAAAGCTGTTACACCTTCTGCACCATTATTACATATATCTTGTATCTaGTTGTCTTGGAAACGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SIICVLQEKAVTPSAPLLHISCI*LSWKRQ Trigger: TTGGCGTTTCCAAGACAACAAGATACAAGATATATG...TAATAATGGTGCAGAAGGTGTAACAGCTTTTTCCTGTAATACACAGATTATGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110579.10 |
||
| CDS GCA 72 bp | ACTGATTGCACCAAGCCAGGACCCGTATCGCCAGTATaGAATTATGCAGGAACCACAAAAGAGATGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TDCTKPGPVSPV*NYAGTTKEMST Trigger: TGTGGACATCTCTTTTGTGGTTCCTGCATAATTGCATACTGGCGATACGGGTCCTGGCTTGGTGCAATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014022.15 ENSMUST00000153528.8 ENSMUST00000209707.2 |
||
| CDS GCA 72 bp | GAGAGTTACCGTTTGTCTACAGATAGGACAACTGATTaGACCAAGCCAGGACCCGTATCGCCAGTATGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: ESYRLSTDRTTD*TKPGPVSPVCN Trigger: ATTGCATACTGGCGATACGGGTCCTGGCTTGGTGCAATCAGTTGTCCTATCTGTAGACAAACGGTAACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014022.15 ENSMUST00000153528.8 ENSMUST00000209707.2 |
||
| CDS CAA 90 bp | GTCCACAGTTTGTTTCAACAGGAAAGGAGGCTTGATGTAAGCAGATaGGACAGTACATTTCAGTGTAGAACTGCTGTCGGGCAGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VHSLFQQERRLDVSR*DSTFQCRTAVGQEQ Trigger: CTGCTCCTGCCCGACAGCAGTTCTACACTGAAATGTACTGTCCAATCTGCTTACATCAAGCCTCCTTTCCTGTTGAAACAAACTGTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000014022.15 ENSMUST00000110575.8 ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 ENSMUST00000140819.8 ENSMUST00000153528.8 ENSMUST00000209300.2 ENSMUST00000209707.2 |
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| CDS TCA 72 bp | AGCCACAAGGACTTGGTCGCTCACTCCTTCTATAAATaGGTCATCCTGCTGCAAACTCTGACCTTCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: SHKDLVAHSFYK*VILLQTLTFTV Trigger: TACAGTGAAGGTCAGAGTTTGCAGCAGGATGACTCATTTATAGAAGGAGTGAGCGACCAAGTCCTTGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000014022.15 ENSMUST00000110575.8 ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000140819.8 ENSMUST00000209300.2 ENSMUST00000209707.2 |
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| CDS TCA 72 bp | CAAGGCTTCTGCATGATAGCCAGGCACTCTACCAACTaGGCAATATCCTCAGACCTTAGTATGGAATACACT | + |
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Preference number: 6 (lower is better) Translates to: QGFCMIARHSTN*AISSDLSMEYT Trigger: AGTGTATTCCATACTAAGGTCTGAGGATATTGCTCAGTTGGTAGAGTGCCTGGCTATCATGCAGAAGCCTTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
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| CDS CCA 72 bp | CATCCTGCTGCAAACTCTGACCTTCACTGTAGTACCTaGCCATTACAGGTCTTTGAATCCAAGATTCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: HPAANSDLHCST*PLQVFESKILL Trigger: TAGGAGAATCTTGGATTCAAAGACCTGTAATGGCCAGGTACTACAGTGAAGGTCAGAGTTTGCAGCAGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000014022.15 ENSMUST00000110575.8 ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000140819.8 ENSMUST00000209300.2 ENSMUST00000209707.2 |
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| CDS GCA 72 bp | ACTCTGACTAGCTCCTGGTTTTCTGGATGGATGTTCTaGTGTACATTTCTGAGAAGTGCATACAGGAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: TLTSSWFSGWMF*CTFLRSAYRRV Trigger: TACTCTCCTGTATGCACTTCTCAGAAATGTACAGCAGAACATCCATCCAGAAAACCAGGAGCTAGTCAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014022.15 ENSMUST00000110575.8 ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 ENSMUST00000140819.8 ENSMUST00000209300.2 ENSMUST00000209707.2 |
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| CDS CCA 72 bp | GTTTGGAATTGTTCTCGAAGCACTCTGACTAGCTCCTaGTTTTCTGGATGGATGTTCTGCTGTACATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VWNCSRSTLTSS*FSGWMFCCTFL Trigger: CAGAAATGTACAGCAGAACATCCATCCAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAACAATTCCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014022.15 ENSMUST00000110575.8 ENSMUST00000110579.10 ENSMUST00000124757.8 ENSMUST00000124867.3 ENSMUST00000140819.8 ENSMUST00000209300.2 ENSMUST00000209707.2 |
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| CDS CAA 90 bp | GCCAGTATGCAATTATGCAGGAACCACAAAAGAGATGTCCACAGTTaGTTTCAACAGGAAAGGAGGCTTGATGTAAGCAGATTGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: ASMQLCRNHKRDVHS*FQQERRLDVSRLDS Trigger: ACTGTCCAATCTGCTTACATCAAGCCTCCTTTCCTGTTGAAACAAACTGTGGACATCTCTTTTGTGGTTCCTGCATAATTGCATACTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014022.15 ENSMUST00000153528.8 ENSMUST00000209707.2 |
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| CDS CAA 90 bp | CCACAAAGGTCTCAAGCTGGTGACTCTAACCAAGTCGGACATAATTaGCTCACCACAAAAGAGATGTCCACAGTTTGTTTCAACAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PQRSQAGDSNQVGHN*LTTKEMSTVCFNRK Trigger: TTTCCTGTTGAAACAAACTGTGGACATCTCTTTTGTGGTGAGCAAATTATGTCCGACTTGGTTAGAGTCACCAGCTTGAGACCTTTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
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| CDS GCA 72 bp | CTCAAGCTGGTGACTCTAACCAAGTCGGACATAATTTaGTCACCACAAAAGAGATGTCCACAGTTTGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LKLVTLTKSDII*SPQKRCPQFVS Trigger: TGAAACAAACTGTGGACATCTCTTTTGTGGTGAGCAAATTATGTCCGACTTGGTTAGAGTCACCAGCTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
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| CDS CCA 72 bp | GTTTGGAATTGTTCTCGAAGCACTCTGACTAGCTCCTaGTTTTCTGGATGGATGTTCTGCTGTACATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VWNCSRSTLTSS*FSGWMFCCTFL Trigger: AAGAAATGTACAGCAGAACATCCATCCAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAACAATTCCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153528.8 |
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| CDS CAA 72 bp | TCTCAAGCTGGTGACTCTAACCAAGTCGGACATAATTaGCTCACCACAAAAGAGATGTCCACAGTTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SQAGDSNQVGHN*LTTKEMSTVCF Trigger: GAAACAAACTGTGGACATCTCTTTTGTGGTGAGCAAATTATGTCCGACTTGGTTAGAGTCACCAGCTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
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| CDS CAA 90 bp | TCTGAATGTATGTTTCATTCATTCCACAAAAGAGATGTCCACAGTTaGTTTCAACAGGAAAGGAGGCTTGATGTAAGCAGATTGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: SECMFHSFHKRDVHS*FQQERRLDVSRLDS Trigger: ACTGTCCAATCTGCTTACATCAAGCCTCCTTTCCTGTTGAAACAAACTGTGGACATCTCTTTTGTGGAATGAATGAAACATACATTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124867.3 |
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| CDS TCA 72 bp | ATGCTATTATTTGGGTGGCAACTAGAGCAGGACTTGTaGAGCAATCTACTCTTCTCAGAACATAAATGTGAT | + |
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Preference number: 6 (lower is better) Translates to: MLLFGWQLEQDL*SNLLFSEHKCD Trigger: ATCACATTTATGTTCTGAGAAGAGTAGATTGCTTCACAAGTCCTGCTCTAGTTGCCACCCAAATAATAGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
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| CDS CCA 72 bp | CTTAGTATGGAATACACTAAACAATATGCTATTATTTaGGTGGCAACTAGAGCAGGACTTGTGAAGCAATCT | + |
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Preference number: 6 (lower is better) Translates to: LSMEYTKQYAII*VATRAGLVKQS Trigger: AGATTGCTTCACAAGTCCTGCTCTAGTTGCCACCCAAATAATAGCATATTGTTTAGTGTATTCCATACTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110575.8 |
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