Pregenerated sensors for RNF17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000365Ensembl transcript IDs: ENSMUST00000095793.3, ENSMUST00000223627.2, ENSMUST00000225737.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CATCATTCATCTTTATCTGCAAGCCCCATTTCTACCAAGGACATGTaGACTGGGTATTGTTCATCTTCATATAATGTCACTATTTGTTCT | + |
Preference number: 1 (lower is better) Translates to: HHSSLSASPISTKDM*TGYCSSSYNVTICS Trigger: AGAACAAATAGTGACATTATATGAAGATGAACAATACCCAGTTCACATGTCCTTGGTAGAAATGGGGCTTGCAGATAAAGATGAATGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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3UTR-3UTR CCA 90 bp | GACAGCTGCAGGAGCTCTTGTGCACATCATTCATCTTTATCTGCAAGCCCCATTCTTCCATGCTCCATTTaGGACAGTATGGTATTCTTG | + |
Preference number: 2 (lower is better) Translates to: DSCRSSCAHHSSLSASPILPCSI*DSMVFL Trigger: CAAGAATACCATACTGTCCCAAATGGAGCATGGAAG...AATGGGGCTTGCAGATAAAGATGAATGATGTGCACAAGAGCTCCTGCAGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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3UTR-3UTR CCA 90 bp | ACAGCTGCAGGAGCTCTTGTGCACATCATTCATCTTTATCTGCAAGCCCCATTTTGTCACTATTTGTTCTaGTGCCTGAGCCACAGAAGA | + |
Preference number: 2 (lower is better) Translates to: TAAGALVHIIHLYLQAPFCHYLF*CLSHRR Trigger: TCTTCTGTGGCTCAGGCACCAGAACAAATAGTGACA...AAATGGGGCTTGCAGATAAAGATGAATGATGTGCACAAGAGCTCCTGCAGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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3UTR-3UTR GCA 90 bp | ACATCATTCATCTTTATCTGCAAGCCCCATTTCTACCAAGGACATGTGAACTGGTCCACAAGGCTTCCATaGTCCATTTGGGACAGTATG | + |
Preference number: 2 (lower is better) Translates to: TSFIFICKPHFYQGHVNWSTRLP*SIWDSM Trigger: CATACTGTCCCAAATGGAGCATGGAAGCCTTGTGGA...CCAGTTCACATGTCCTTGGTAGAAATGGGGCTTGCAGATAAAGATGAATGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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3UTR-3UTR CCA 90 bp | TCTTGTGCACATCATTCATCTTTATCTGCAAGCCCCATTTCTACCAAGGACATGCCATTTGGGACAGTATaGTATTCTTGTTTTTCCCGA | + |
Preference number: 2 (lower is better) Translates to: SCAHHSSLSASPISTKDMPFGTV*YSCFSR Trigger: TCGGGAAAAACAAGAATACCATACTGTCCCAAATGG...CATGTCCTTGGTAGAAATGGGGCTTGCAGATAAAGATGAATGATGTGCACAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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3UTR-3UTR CCA 90 bp | ATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGACAAGGACATGTGAACTaGGTATTGTTCATCTTCATA | + |
Preference number: 2 (lower is better) Translates to: IPLQNKLKSNLKWYKSNRQGHVN*VLFIFI Trigger: TATGAAGATGAACAATACCCAGTTCACATGTCCTTG...TCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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3UTR-3UTR CAA 90 bp | TGGACAGCTGCAGGAGCTCTTGTGCACATCATTCATCTTTATCTGCAAGCCCCAGCTTCCATGCTCCATTaGGGACAGTATGGTATTCTT | + |
Preference number: 3 (lower is better) Translates to: WTAAGALVHIIHLYLQAPASMLH*GQYGIL Trigger: AAGAATACCATACTGTCCCAAATGGAGCATGGAAGC...TGGGGCTTGCAGATAAAGATGAATGATGTGCACAAGAGCTCCTGCAGCTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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3UTR TCA 72 bp | TCTTTATCTGCAAGCCCCATTTCTACCAAGGACATGTaGACTGGGTATTGTTCATCTTCATATAATGTCACT | + |
Preference number: 3 (lower is better) Translates to: SLSASPISTKDM*TGYCSSSYNVT Trigger: AGTGACATTATATGAAGATGAACAATACCCAGTTCACATGTCCTTGGTAGAAATGGGGCTTGCAGATAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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CDS-3UTR CCA 90 bp | TGCACATCATTCATCTTTATCTGCAAGCCCCATTTCTACCAAGGACATGTGAACAGCACCTTTATGGCTTaGGCTGGGTACTGCATAAGC | + |
Preference number: 4 (lower is better) Translates to: CTSFIFICKPHFYQGHVNSTFMA*AGYCIS Trigger: GCTTATGCAGTACCCAGCCCAAGCCATAAAGGTGCT...GTTCACATGTCCTTGGTAGAAATGGGGCTTGCAGATAAAGATGAATGATGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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CDS-3UTR TCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAATTACTCTCCACTAGGTaGCAGGAAGCCAGCCCGGTC | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKLLSTR*QEASPV Trigger: GACCGGGCTGGCTTCCTGTCACCTAGTGGAGAGTAA...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGTTACTCTCCACTAGGTaGCAGGAAGCCAGCCCGGTC | + |
Preference number: 4 (lower is better) Translates to: LLLALIVHNQNVFVKANWLLSTR*QEASPV Trigger: GACCGGGCTGGCTTCCTGTCACCTAGTGGAGAGTAA...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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3UTR CAA 72 bp | TGCCTGAGCCACAGAAGAAGCATAAAGTTGTTTTCCTaGGAGACAGTCTATCATAGTCCACAAGGCTTCCAT | + |
Preference number: 4 (lower is better) Translates to: CLSHRRSIKLFS*ETVYHSPQGFH Trigger: ATGGAAGCCTTGTGGACTATGATAGACTGTCTCCAAGGAAAACAACTTTATGCTTCTTCTGTGGCTCAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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CDS-3UTR TCA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACTTGCTATGGCTCCAGTaGGGTGCAGTGACAGACAGT | + |
Preference number: 4 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNLLWLQ*GAVTDS Trigger: ACTGTCTGTCACTGCACCTCACTGGAGCCATAGCAA...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACGTCCACCTCTCTCTTTaGAAGCAGCTCCTGAAGCAG | + |
Preference number: 4 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNVHLSL*KQLLKQ Trigger: CTGCTTCAGGAGCTGCTTTCAAAGAGAGAGGTGGAC...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAAACTCTGACTCCCAGCTaGCTCCACTGTCATCCGTGT | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKTLTPS*LHCHPC Trigger: ACACGGATGACAGTGGAGTCAGCTGGGAGTCAGAGT...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTCCAGTGAGGTGCAGTaGCAGACAGTCACAAGCTGT | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQISSEVQ*QTVTSC Trigger: ACAGCTTGTGACTGTCTGTCACTGCACCTCACTGGA...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACGGGAGGTTTAAACCCTaGCAAGAGCACCTTTATGGC | + |
Preference number: 4 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNGRFKP*QEHLYG Trigger: GCCATAAAGGTGCTCTTGGCAGGGTTTAAACCTCCC...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCCAGCTCTATGGCATCTaGCTGCCAGGTATTCCCAAC | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIQLYGI*LPGIPN Trigger: GTTGGGAATACCTGGCAGCCAGATGCCATAGAGCTG...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAACCTGAAGCAGCTCTATaGCATCTGGCTGCCAGGTAT | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKPEAAL*HLAARY Trigger: ATACCTGGCAGCCAGATGCCATAGAGCTGCTTCAGG...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTCTTTCCCATACTGCTaGACATGCAGATGGCCTCAC | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSSFPYC*TCRWPH Trigger: GTGAGGCCATCTGCATGTTCAGCAGTATGGGAAAGA...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACTCTTTCCCATACTGCTaGACATGCAGATGGCCTCAC | + |
Preference number: 4 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHSFPYC*TCRWPH Trigger: GTGAGGCCATCTGCATGTTCAGCAGTATGGGAAAGA...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR TCA 90 bp | ATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGATGGACAACCTGCTTTTaGTCCAACAGGAGCAGACTG | + |
Preference number: 4 (lower is better) Translates to: IPLQNKLKSNLKWYKSNRWTTCF*SNRSRL Trigger: CAGTCTGCTCCTGTTGGATCAAAAGCAGGTTGTCCA...TCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACTGGACAACCTGCTTTTaGTCCAACAGGAGCAGACTG | + |
Preference number: 4 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHWTTCF*SNRSRL Trigger: CAGTCTGCTCCTGTTGGATCAAAAGCAGGTTGTCCA...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR TCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAATTCCCAGCCCTCAGTTaGATTGTATGGGACGATGTC | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEEFPALS*IVWDDV Trigger: GACATCGTCCCATACAATTCAACTGAGGGCTGGGAA...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCAACAGGCTTCCATTCTaGGTGCTCATACGCTGCTAC | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQINRLPF*VLIRCY Trigger: GTAGCAGCGTATGAGCACTCAGAATGGAAGCCTGTT...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTGGCCTCTTCGCCACTaGTTTTTAGCTGGGACCTTA | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSWPLRH*FLAGTL Trigger: TAAGGTCCCAGCTAAAAATCAGTGGCGAAGAGGCCA...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCGCACTTAGTAACTACTaGATCTCCTTGCTCCAGGGG | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIALSNY*ISLLQG Trigger: CCCCTGGAGCAAGGAGATTCAGTAGTTACTAAGTGC...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAATGCTGTTCACCATCATaGTCTGGTCCCTCATGTGTG | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEECCSPS*SGPSCV Trigger: CACACATGAGGGACCAGAGCATGATGGTGAACAGCA...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACTGCTGTTCACCATCATaGTCTGGTCCCTCATGTGTG | + |
Preference number: 4 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHCCSPS*SGPSCV Trigger: CACACATGAGGGACCAGAGCATGATGGTGAACAGCA...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR GCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAAGGCTTCCATTCTGAGTaGTCATACGCTGCTACCATC | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEEGFHSE*SYAATI Trigger: GATGGTAGCAGCGTATGAGCACTCAGAATGGAAGCC...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAAATGGCTCCAGTGAGGTaGAGTGACAGACAGTCACAA | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEEMAPVR*SDRQSQ Trigger: TTGTGACTGTCTGTCACTGCACCTCACTGGAGCCAT...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTCCGGTGAGACAATGTaGTTCACTTGCACGGCAAAC | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSSGETM*FTCTAN Trigger: GTTTGCCGTGCAAGTGAAGCACATTGTCTCACCGGA...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000225737.2 |
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CDS-3UTR GCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAATCCGGTGAGACAATGTaGTTCACTTGCACGGCAAAC | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKSGETM*FTCTAN Trigger: GTTTGCCGTGCAAGTGAAGCACATTGTCTCACCGGA...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000225737.2 |
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CDS-3UTR CCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCAGCACCTTTATGGCTTaGGCTGGGTACTGCATAAGC | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQISTFMA*AGYCIS Trigger: GCTTATGCAGTACCCAGCCCAAGCCATAAAGGTGCT...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000225737.2 |
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CDS-3UTR TCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTTGAAAGCAGCTCCTaGAGCAGCTCTATGGCATCT | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIFESSS*SSSMAS Trigger: AGATGCCATAGAGCTGCTTCAGGAGCTGCTTTCAAA...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTTTTCCCTTCTAAATaGCTGTCAGGGGCCTCTGCT | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIFFPSK*LSGASA Trigger: AGCAGAGGCCCCTGACAGGCATTTAGAAGGGAAAAA...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACTTTTTCCCTTCTAAATaGCTGTCAGGGGCCTCTGCT | + |
Preference number: 4 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHFFPSK*LSGASA Trigger: AGCAGAGGCCCCTGACAGGCATTTAGAAGGGAAAAA...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR GCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCACAGTCACAAGCTGTTaGTGTCCACTTGTCACTTCC | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQITVTSC*CPLVTS Trigger: GGAAGTGACAAGTGGACAGCAACAGCTTGTGACTGT...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACTTCTTGTTAAATCTCTaGAGCGCTTCCTCCAGGTTC | + |
Preference number: 4 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNFLLNL*SASSRF Trigger: GAACCTGGAGGAAGCGCTGCAGAGATTTAACAAGAA...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAATCCACAAGGCTTCCATaGTCCATTTGGGACAGTATG | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKSTRLP*SIWDSM Trigger: CATACTGTCCCAAATGGAGCATGGAAGCCTTGTGGA...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAATTATCACATCAGGGCTaGATCCCAGTTGAGGCAGTA | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEELSHQG*IPVEAV Trigger: TACTGCCTCAACTGGGATCCAGCCCTGATGTGATAA...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACTTATCACATCAGGGCTaGATCCCAGTTGAGGCAGTA | + |
Preference number: 4 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHLSHQG*IPVEAV Trigger: TACTGCCTCAACTGGGATCCAGCCCTGATGTGATAA...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR CCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAACCACTGATTTTTAGCTaGGACCTTAACAGCGCAGTG | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKPLIFS*DLNSAV Trigger: CACTGCGCTGTTAAGGTCCCAGCTAAAAATCAGTGG...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | ATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGACTTGTGGTATATTCTTaGGGTGCTAACAGGCACAGT | + |
Preference number: 4 (lower is better) Translates to: IPLQNKLKSNLKWYKSNRLVVYS*GANRHS Trigger: ACTGTGCCTGTTAGCACCTCAAGAATATACCACAAG...TCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGCTTGTGGTATATTCTTaGGGTGCTAACAGGCACAGT | + |
Preference number: 4 (lower is better) Translates to: LLLALIVHNQNVFVKANWLVVYS*GANRHS Trigger: ACTGTGCCTGTTAGCACCTCAAGAATATACCACAAG...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR TCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAAGACCTTGATTCATGCTaGCAGTTGTATGAACCTCAC | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKDLDSC*QLYEPH Trigger: GTGAGGTTCATACAACTGTCAGCATGAATCAAGGTC...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCAAACCAATGCATCTCTaGGAGACACAGGCATATCAC | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIKPMHL*ETQAYH Trigger: GTGATATGCCTGTGTCTCTCAGAGATGCATTGGTTT...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
||
CDS-3UTR TCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCCACTATTGCCTCAAATaGACTCGTGTTAGGAACAGC | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIHYCLK*TRVRNS Trigger: GCTGTTCCTAACACGAGTTCATTTGAGGCAATAGTG...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
||
CDS-3UTR TCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAATTCTCAGTGAACCCATaGTCTAAATACTGGACCCTG | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEEFSVNP*SKYWTL Trigger: CAGGGTCCAGTATTTAGATCATGGGTTCACTGAGAA...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAAAGACAACTTCCCCCATaGATTGTTGGGCAATTCCAT | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKRQLPP*IVGQFH Trigger: ATGGAATTGCCCAACAATTCATGGGGGAAGTTGTCT...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGAAACTCCACAGCCTTTaGGGGAGAATCACTTTCTCT | + |
Preference number: 4 (lower is better) Translates to: LLLALIVHNQNVFVKANWKLHSL*GRITFS Trigger: AGAGAAAGTGATTCTCCCTCAAAGGCTGTGGAGTTT...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR GCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAAACTACTGAATCTCCTTaGTCCAGGGGTATTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEETTESP*SRGISR Trigger: TCTGGAAATACCCCTGGAGCAAGGAGATTCAGTAGT...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTATCAGATCCTCTCACTaGACAAGGCTCTCCCTTTTT | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSIRSSH*TRLSLF Trigger: AAAAAGGGAGAGCCTTGTGCAGTGAGAGGATCTGAT...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
||
CDS-3UTR CCA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACCCCTCTTTCACGAGCTaGTCATTAATACTAACAGCA | + |
Preference number: 4 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNPSFTS*SLILTA Trigger: TGCTGTTAGTATTAATGACCAGCTCGTGAAAGAGGG...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
||
CDS-3UTR CCA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACCTTCCATGCTCCATTTaGGACAGTATGGTATTCTTG | + |
Preference number: 4 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNLPCSI*DSMVFL Trigger: CAAGAATACCATACTGTCCCAAATGGAGCATGGAAG...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
||
CDS-3UTR CCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTGTCACTATTTGTTCTaGTGCCTGAGCCACAGAAGA | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSCHYLF*CLSHRR Trigger: TCTTCTGTGGCTCAGGCACCAGAACAAATAGTGACA...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTGTCTCTTGTCTTGTTTaGTCTTGTGTGCTATCAAGC | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSVSCLV*SCVLSS Trigger: GCTTGATAGCACACAAGATCAAACAAGACAAGAGAC...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACGTCTCTTGTCTTGTTTaGTCTTGTGTGCTATCAAGC | + |
Preference number: 4 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHVSCLV*SCVLSS Trigger: GCTTGATAGCACACAAGATCAAACAAGACAAGAGAC...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
||
CDS-3UTR TCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCGAGAAGGAGCAGATCTaGGTTCTTTTGCTATCTTCA | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIEKEQI*VLLLSS Trigger: TGAAGATAGCAAAAGAACTCAGATCTGCTCCTTCTC...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGGAGAAGGAGCAGATCTaGGTTCTTTTGCTATCTTCA | + |
Preference number: 4 (lower is better) Translates to: LLLALIVHNQNVFVKANWEKEQI*VLLLSS Trigger: TGAAGATAGCAAAAGAACTCAGATCTGCTCCTTCTC...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR GCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAACAGCTTACATTTAATTaGCTTCTCTGGGGGTTCCAA | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKQLTFN*LLWGFQ Trigger: TTGGAACCCCCAGAGAAGGCAATTAAATGTAAGCTG...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
||
CDS-3UTR GCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCGTCTATAGCATCCGGTaGTTCTGCTTTCTGATTTCT | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIVYSIR*FCFLIS Trigger: AGAAATCAGAAAGCAGAAGCACCGGATGCTATAGAC...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCCCTAGGGGTGTTCCTTaGAATTATGGAACTAACTTG | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIPRGVP*NYGTNL Trigger: CAAGTTAGTTCCATAATTCCAAGGAACACCCCTAGG...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTCTTTTTCCAGGAATATaGCTCCAAAAGACCAAGGCA | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSLFPGI*LQKTKA Trigger: TGCCTTGGTCTTTTGGAGCCATATTCCTGGAAAAAG...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAACAGGCATATCACTGCTaGTTTTATTTGTTGGTGGTT | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKQAYHC*FYLLVV Trigger: AACCACCAACAAATAAAATCAGCAGTGATATGCCTG...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTGTGGAATCTTCTCAGTaGACCCATGATCTAAATACT | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSVESSQ*THDLNT Trigger: AGTATTTAGATCATGGGTTCACTGAGAAGATTCCAC...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | ATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAGCCTGCTATCTTCAGTaGTTCATCAATTTCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: IPLQNKLKSNLKWYKSNRACYLQ*FINFFC Trigger: ACAGAAGAAATTGATGAAGCACTGAAGATAGCAGGC...TCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACGCCTGCTATCTTCAGTaGTTCATCAATTTCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHACYLQ*FINFFC Trigger: ACAGAAGAAATTGATGAAGCACTGAAGATAGCAGGC...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR GCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAAGGTGTAAGCTCCTATTaGAAACTTGCTTCATCTTCT | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEEGVSSY*KLASSS Trigger: AGAAGATGAAGCAAGTTTGCAATAGGAGCTTACACC...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGGGTGTAAGCTCCTATTaGAAACTTGCTTCATCTTCT | + |
Preference number: 4 (lower is better) Translates to: LLLALIVHNQNVFVKANWGVSSY*KLASSS Trigger: AGAAGATGAAGCAAGTTTGCAATAGGAGCTTACACC...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR GCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTTCCATAAAAACCAATaGATCTCTGAGAGACACAGG | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSFHKNQ*ISERHR Trigger: CCTGTGTCTCTCAGAGATGCATTGGTTTTTATGGAA...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAACACAGACTGAGAATTTaGTTGGACTACATGGTTTTC | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEEHRLRI*LDYMVF Trigger: GAAAACCATGTAGTCCAACCAAATTCTCAGTCTGTG...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACCACAGACTGAGAATTTaGTTGGACTACATGGTTTTC | + |
Preference number: 4 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHHRLRI*LDYMVF Trigger: GAAAACCATGTAGTCCAACCAAATTCTCAGTCTGTG...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR CCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTTAATTGCCTTCTCTaGGGGTTCCAAAAACTCATC | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIFNCLL*GFQKLI Trigger: GATGAGTTTTTGGAACCCCCAGAGAAGGCAATTAAA...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACGACTTCTCAGGTGAATaGCTGTTACTTGATTTACTA | + |
Preference number: 4 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNDFSGE*LLLDLL Trigger: TAGTAAATCAAGTAACAGCCATTCACCTGAGAAGTC...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | ATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAATACAGATGACATTGTaGAATCTTCTCAGTGAACCC | + |
Preference number: 4 (lower is better) Translates to: IPLQNKLKSNLKWYKSNRIQMTL*NLLSEP Trigger: GGGTTCACTGAGAAGATTCCACAATGTCATCTGTAT...TCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAACCATTTGGGACAGTATaGTATTCTTGTTTTTCCCGA | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEEPFGTV*YSCFSR Trigger: TCGGGAAAAACAAGAATACCATACTGTCCCAAATGG...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | ATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGATTATATGGCAAACCATaGCTGAAACTTCAGTCATCT | + |
Preference number: 4 (lower is better) Translates to: IPLQNKLKSNLKWYKSNRLYGKP*LKLQSS Trigger: AGATGACTGAAGTTTCAGTCATGGTTTGCCATATAA...TCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR TCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAACTCCTTGTTATACAATaGCTGGAAATTCTCATTAGG | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKLLVIQ*LEILIR Trigger: CCTAATGAGAATTTCCAGTCATTGTATAACAAGGAG...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTGAACCTCACAGTCAGTaGATTTACTTGTGGTATATT | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSEPHSQ*IYLWYI Trigger: AATATACCACAAGTAAATGCACTGACTGTGAGGTTC...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACGAACCTCACAGTCAGTaGATTTACTTGTGGTATATT | + |
Preference number: 4 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHEPHSQ*IYLWYI Trigger: AATATACCACAAGTAAATGCACTGACTGTGAGGTTC...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR GCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTTCAAAATTACAGCCTaGTATCTTCAGTGCTTCATC | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSFKITA*YLQCFI Trigger: GATGAAGCACTGAAGATAGCAGGCTGTAATTTTGAA...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCAGATCTGAGTTCTTTTaGTATCTTCATAGCTGCATC | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIRSEFF*YLHSCI Trigger: GATGCAGCTATGAAGATAGCAAAAGAACTCAGATCT...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGAGATCTGAGTTCTTTTaGTATCTTCATAGCTGCATC | + |
Preference number: 4 (lower is better) Translates to: LLLALIVHNQNVFVKANWRSEFF*YLHSCI Trigger: GATGCAGCTATGAAGATAGCAAAAGAACTCAGATCT...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR GCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTTTGTTGGTGGTTTCTaGAGATCTACAATAAGGACA | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSFVGGF*RSTIRT Trigger: TGTCCTTATTGTAGATCTGCAGAAACCACCAACAAA...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTCATTCATCTTTATCTaGAAGCCCCATTTCTACCAA | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSSFIFI*KPHFYQ Trigger: TTGGTAGAAATGGGGCTTGCAGATAAAGATGAATGA...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTCAGTGCATTTACTTGTaGTATATTCTTGAGGTGCTA | + |
Preference number: 4 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSQCIYL*YILEVL Trigger: TAGCACCTCAAGAATATACCACAAGTAAATGCACTG...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACCAGTGCATTTACTTGTaGTATATTCTTGAGGTGCTA | + |
Preference number: 4 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHQCIYL*YILEVL Trigger: TAGCACCTCAAGAATATACCACAAGTAAATGCACTG...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR CCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAAACAAGCTCTTTTTCCTaGAATCAAGAGAAGCAAGAA | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEETSSFS*NQEKQE Trigger: TTCTTGCTTCTCTTGATTCCAGGAAAAAGAGCTTGT...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CCA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGACAAGCTCTTTTTCCTaGAATCAAGAGAAGCAAGAA | + |
Preference number: 4 (lower is better) Translates to: LLLALIVHNQNVFVKANWTSSFS*NQEKQE Trigger: TTCTTGCTTCTCTTGATTCCAGGAAAAAGAGCTTGT...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR GCA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCATCTCTTTTGTTGGCTaGTTCTTTTTCCCTTCTAAA | + |
Preference number: 4 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIISFVG*FFFPSK Trigger: TTTAGAAGGGAAAAAGAAGCAGCCAACAAAAGAGAT...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
||
CDS-3UTR GCA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACATCTCTTTTGTTGGCTaGTTCTTTTTCCCTTCTAAA | + |
Preference number: 4 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHISFVG*FFFPSK Trigger: TTTAGAAGGGAAAAAGAAGCAGCCAACAAAAGAGAT...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR GCA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAAACTTGGTTCAACATATaGCAGCTTACATTTAATTGC | + |
Preference number: 4 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKTWFNI*QLTFNC Trigger: GCAATTAAATGTAAGCTGGCATATGTTGAACCAAGT...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAAAATGGAAATGATCTTTaGTCTATACCACAAACCATC | + |
Preference number: 4 (lower is better) Translates to: NFSPHHSLTIYQVRLKEENGNDL*SIPQTI Trigger: GATGGTTTGTGGTATAGAGCAAAGATCATTTCCATT...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR GCA 90 bp | ATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGATTGTCAACTTCTCTGTaGAACCATAATCAACAAACA | + |
Preference number: 4 (lower is better) Translates to: IPLQNKLKSNLKWYKSNRLSTSL*NHNQQT Trigger: TGTTTGTTGATTATGGTTGCACAGAGAAGTTGACAA...TCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CCA 90 bp | AACAGGCACAGTTCACAAAAGGCATGTCCACATGGAAACTTGTGGTaGTCACCGGAGGCAACGGACACCTTCCTTCCACACCGAGTGCAC | + |
Preference number: 5 (lower is better) Translates to: NRHSSQKACPHGNLW*SPEATDTFLPHRVH Trigger: GTGCACTCGGTGTGGAAGGAAGGTGTCCGTTGCCTCCGGTGACCACCACAAGTTTCCATGTGGACATGCCTTTTGTGAACTGTGCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS CCA 90 bp | GCTAACAGGCACAGTTCACAAAAGGCATGTCCACATGGAAACTTGTaGTGGTCACCGGAGGCAACGGACACCTTCCTTCCACACCGAGTG | + |
Preference number: 5 (lower is better) Translates to: ANRHSSQKACPHGNL*WSPEATDTFLPHRV Trigger: CACTCGGTGTGGAAGGAAGGTGTCCGTTGCCTCCGGTGACCACCACAAGTTTCCATGTGGACATGCCTTTTGTGAACTGTGCCTGTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS GCA 90 bp | AAATCCGTCAGGGGAGGAAACGTCTCCACGTTCTTGTTAAATCTCTaGAGCGCTTCCTCCAGGTTCTCTGACTCTGACTCCCAGCTGACT | + |
Preference number: 5 (lower is better) Translates to: KSVRGGNVSTFLLNL*SASSRFSDSDSQLT Trigger: AGTCAGCTGGGAGTCAGAGTCAGAGAACCTGGAGGAAGCGCTGCAGAGATTTAACAAGAACGTGGAGACGTTTCCTCCCCTGACGGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS GCA 90 bp | GGCTGCTTCTTTTTCCCTTCTAAATGCCTGTCAGGGGCCTCTGCTTaGAAAGGAGGTTCAGGTGTTTCATCAGTCAGGACAGCAGCATCT | + |
Preference number: 5 (lower is better) Translates to: GCFFFPSKCLSGASA*KGGSGVSSVRTAAS Trigger: AGATGCTGCTGTCCTGACTGATGAAACACCTGAACCTCCTTTGCAAGCAGAGGCCCCTGACAGGCATTTAGAAGGGAAAAAGAAGCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS TCA 90 bp | ACCAGTTTGTCTGTAACCATTCTGAGAATCTGGCCTCTTCGCCACTaGTTTTTAGCTGGGACCTTAACAGCGCAGTGCATATCACACTCC | + |
Preference number: 5 (lower is better) Translates to: TSLSVTILRIWPLRH*FLAGTLTAQCISHS Trigger: GGAGTGTGATATGCACTGCGCTGTTAAGGTCCCAGCTAAAAATCAGTGGCGAAGAGGCCAGATTCTCAGAATGGTTACAGACAAACTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS TCA 90 bp | ACGTTGTGTTGCTTTCCTGTAAGATTATGGTTGCTATGGCTCCAGTaGGGTGCAGTGACAGACAGTCACAAGCTGTTGCTGTCCACTTGT | + |
Preference number: 5 (lower is better) Translates to: TLCCFPVRLWLLWLQ*GAVTDSHKLLLSTC Trigger: ACAAGTGGACAGCAACAGCTTGTGACTGTCTGTCACTGCACCTCACTGGAGCCATAGCAACCATAATCTTACAGGAAAGCAACACAACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS GCA 90 bp | GTGTTGCTTTCCTGTAAGATTATGGTTGCTATGGCTCCAGTGAGGTaGAGTGACAGACAGTCACAAGCTGTTGCTGTCCACTTGTCACTT | + |
Preference number: 5 (lower is better) Translates to: VLLSCKIMVAMAPVR*SDRQSQAVAVHLSL Trigger: AAGTGACAAGTGGACAGCAACAGCTTGTGACTGTCTGTCACTGCACCTCACTGGAGCCATAGCAACCATAATCTTACAGGAAAGCAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CCA 90 bp | TGTAACCATTCTGAGAATCTGGCCTCTTCGCCACTGATTTTTAGCTaGGACCTTAACAGCGCAGTGCATATCACACTCCCACTTAACAGG | + |
Preference number: 5 (lower is better) Translates to: CNHSENLASSPLIFS*DLNSAVHITLPLNR Trigger: CCTGTTAAGTGGGAGTGTGATATGCACTGCGCTGTTAAGGTCCCAGCTAAAAATCAGTGGCGAAGAGGCCAGATTCTCAGAATGGTTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CTGCAAGCCCCATTTCTACCAAGGACATGTGAACTGGGTATTGTTCATCTTCATGAGCACCTTTATGGCTaGGGCTGGGTACTGCATAAG | + |
Preference number: 5 (lower is better) Translates to: LQAPFLPRTCELGIVHLHEHLYG*GWVLHK Trigger: CTTATGCAGTACCCAGCCCAAGCCATAAAGGTGCTC...ATGAAGATGAACAATACCCAGTTCACATGTCCTTGGTAGAAATGGGGCTTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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CDS TCA 90 bp | AAATATAGTTCCATCGTCACCAATGCAGGTCACTATTGCCTCAAATaGACTCGTGTTAGGAACAGCTGGTGGTCTATAGCATCCGGTGCT | + |
Preference number: 5 (lower is better) Translates to: KYSSIVTNAGHYCLK*TRVRNSWWSIASGA Trigger: AGCACCGGATGCTATAGACCACCAGCTGTTCCTAACACGAGTTCATTTGAGGCAATAGTGACCTGCATTGGTGACGATGGAACTATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS GCA 90 bp | GCGCAGTGCATATCACACTCCCACTTAACAGGCTTCCATTCTGAGTaGTCATACGCTGCTACCATCTTCTCTTCTAAACTATTAAGTAAG | + |
Preference number: 5 (lower is better) Translates to: AQCISHSHLTGFHSE*SYAATIFSSKLLSK Trigger: CTTACTTAATAGTTTAGAAGAGAAGATGGTAGCAGCGTATGAGCACTCAGAATGGAAGCCTGTTAAGTGGGAGTGTGATATGCACTGCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | AAAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCGCTGTTGCTGTCCACTaGTCACTTCCGCCAGTTGGC | + |
Preference number: 5 (lower is better) Translates to: KTDTTAEQVKIKPEVVQIAVAVH*SLPPVG Trigger: GCCAACTGGCGGAAGTGACAAGTGGACAGCAACAGC...GATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACGAGCACCTTTATGGCTaGGGCTGGGTACTGCATAAG | + |
Preference number: 5 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNEHLYG*GWVLHK Trigger: CTTATGCAGTACCCAGCCCAAGCCATAAAGGTGCTC...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000225737.2 |
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CDS-3UTR CAA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACGACAGTCACAAGCTGTaGCTGTCCACTTGTCACTTC | + |
Preference number: 5 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNDSHKL*LSTCHF Trigger: GAAGTGACAAGTGGACAGCAACAGCTTGTGACTGTC...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACTCTGAGGGGGCTTTTTaGGGTATCCAGAAGTCTCTA | + |
Preference number: 5 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNSEGAF*GIQKSL Trigger: TAGAGACTTCTGGATACCCAAAAAAGCCCCCTCAGA...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTCTGGACAACCTGCTTTaGATCCAACAGGAGCAGACT | + |
Preference number: 5 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSLDNLL*IQQEQT Trigger: AGTCTGCTCCTGTTGGATCAAAAGCAGGTTGTCCAG...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGCTGGACAACCTGCTTTaGATCCAACAGGAGCAGACT | + |
Preference number: 5 (lower is better) Translates to: LLLALIVHNQNVFVKANWLDNLL*IQQEQT Trigger: AGTCTGCTCCTGTTGGATCAAAAGCAGGTTGTCCAG...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR CAA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACCAGGTAATGGCCACGTaGTGTTGCTTTCCTGTAAGA | + |
Preference number: 5 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNQVMAT*CCFPVR Trigger: TCTTACAGGAAAGCAACACAACGTGGCCATTACCTG...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAATGTCCACCTCTCTCTTaGAAAGCAGCTCCTGAAGCA | + |
Preference number: 5 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKCPPLS*KAAPEA Trigger: TGCTTCAGGAGCTGCTTTCAAAGAGAGAGGTGGACA...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGTCTGAGGGGGCTTTTTaGGGTATCCAGAAGTCTCTA | + |
Preference number: 5 (lower is better) Translates to: LLLALIVHNQNVFVKANWSEGAF*GIQKSL Trigger: TAGAGACTTCTGGATACCCAAAAAAGCCCCCTCAGA...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR CAA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACGCTTCCATGCTCCATTaGGGACAGTATGGTATTCTT | + |
Preference number: 5 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNASMLH*GQYGIL Trigger: AAGAATACCATACTGTCCCAAATGGAGCATGGAAGC...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS GCA 90 bp | GTATCAAAGTTAATTTTAAAGCACTTAGTAACTACTGAATCTCCTTaGTCCAGGGGTATTTCCAGAGACTTCTCAGGTGAATGGCTGTTA | + |
Preference number: 5 (lower is better) Translates to: VSKLILKHLVTTESP*SRGISRDFSGEWLL Trigger: TAACAGCCATTCACCTGAGAAGTCTCTGGAAATACCCCTGGAGCAAGGAGATTCAGTAGTTACTAAGTGCTTTAAAATTAACTTTGATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAATACTGGGTAGTGACCTaGATTCATGCTGACAGTTGT | + |
Preference number: 5 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKYWVVT*IHADSC Trigger: ACAACTGTCAGCATGAATCAAGGTCACTACCCAGTA...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGTACTGGGTAGTGACCTaGATTCATGCTGACAGTTGT | + |
Preference number: 5 (lower is better) Translates to: LLLALIVHNQNVFVKANWYWVVT*IHADSC Trigger: ACAACTGTCAGCATGAATCAAGGTCACTACCCAGTA...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR CAA 90 bp | ATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAACAACCTCCATAACTTaGCCACGGTACCACAAAGTA | + |
Preference number: 5 (lower is better) Translates to: IPLQNKLKSNLKWYKSNRTTSIT*PRYHKV Trigger: TACTTTGTGGTACCGTGGCAAAGTTATGGAGGTTGT...TCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS TCA 90 bp | CTGAAGATAAAAATCAGTAGGACTATTTATATGGCAAACCATGACTaGAACTTCAGTCATCTCTTCAGGCAAAATGGGTGGATGATAGCA | + |
Preference number: 5 (lower is better) Translates to: LKIKISRTIYMANHD*NFSHLFRQNGWMIA Trigger: TGCTATCATCCACCCATTTTGCCTGAAGAGATGACTGAAGTTTCAGTCATGGTTTGCCATATAAATAGTCCTACTGATTTTTATCTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGTCAGTGCATTTACTaGTGGTATATTCTTGAGGTG | + |
Preference number: 5 (lower is better) Translates to: LIPLQNKLKSNLKWYKSNSQCIY*WYILEV Trigger: CACCTCAAGAATATACCACAAGTAAATGCACTGACT...GTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | ATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGACAACCATCTCTTTTGTaGGCTGCTTCTTTTTCCCTT | + |
Preference number: 5 (lower is better) Translates to: IPLQNKLKSNLKWYKSNRQPSLL*AASFSL Trigger: AAGGGAAAAAGAAGCAGCCAACAAAAGAGATGGTTG...TCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGCAACCATCTCTTTTGTaGGCTGCTTCTTTTTCCCTT | + |
Preference number: 5 (lower is better) Translates to: LLLALIVHNQNVFVKANWQPSLL*AASFSL Trigger: AAGGGAAAAAGAAGCAGCCAACAAAAGAGATGGTTG...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR CAA 90 bp | ATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAGCTCCTATTGCAAACTaGCTTCATCTTCTTCTCCAA | + |
Preference number: 5 (lower is better) Translates to: IPLQNKLKSNLKWYKSNRAPIAN*LHLLLQ Trigger: TTGGAGAAGAAGATGAAGCAAGTTTGCAATAGGAGC...TCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGGCTCCTATTGCAAACTaGCTTCATCTTCTTCTCCAA | + |
Preference number: 5 (lower is better) Translates to: LLLALIVHNQNVFVKANWAPIAN*LHLLLQ Trigger: TTGGAGAAGAAGATGAAGCAAGTTTGCAATAGGAGC...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR CAA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAATTTAGCTACACAGGCTaGATTCTGAAGAGGACAAAG | + |
Preference number: 5 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKFSYTG*ILKRTK Trigger: CTTTGTCCTCTTCAGAATCAAGCCTGTGTAGCTAAA...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAAAAGACCTCTACCAGTTaGTCTGTAACCATTCTGAGA | + |
Preference number: 5 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKKTSTS*SVTILR Trigger: TCTCAGAATGGTTACAGACAAACTGGTAGAGGTCTT...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | AACTTTTCACCACACCATTCCTTAACAATTTACCAAGTAAGACTAAAGGAGGAAAACTTCCCCCATGAATaGTTGGGCAATTCCATAATG | + |
Preference number: 5 (lower is better) Translates to: NFSPHHSLTIYQVRLKEENFPHE*LGNSIM Trigger: CATTATGGAATTGCCCAACAATTCATGGGGGAAGTT...TTCCTCCTTTAGTCTTACTTGGTAAATTGTTAAGGAATGGTGTGGTGAAAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CTTTTATTGGCACTAATAGTTCATAATCAGAATGTGTTTGTCAAGGCTAACTGGCTCTCACTTACTGAATaGTATGGGACGATGTCTTTC | + |
Preference number: 5 (lower is better) Translates to: LLLALIVHNQNVFVKANWLSLTE*YGTMSF Trigger: GAAAGACATCGTCCCATACAATTCAGTAAGTGAGAG...CCAGTTAGCCTTGACAAACACATTCTGATTATGAACTATTAGTGCCAATAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR CAA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACAGTCAGTGCATTTACTaGTGGTATATTCTTGAGGTG | + |
Preference number: 5 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHSQCIY*WYILEV Trigger: CACCTCAAGAATATACCACAAGTAAATGCACTGACT...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR CAA 90 bp | AAACTGATACCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTTTACAGCTGATGGGTTaGAAACATTCCTATGTATGG | + |
Preference number: 5 (lower is better) Translates to: KLIPLQNKLKSNLKWYKSLQLMG*KHSYVW Trigger: CCATACATAGGAATGTTTCAAACCCATCAGCTGTAA...AGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGGTATCAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAATGTCTCTTGTCTTGTTaGATCTTGTGTGCTATCAAG | + |
Preference number: 5 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKCLLSC*ILCAIK Trigger: CTTGATAGCACACAAGATCAAACAAGACAAGAGACA...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | TTACAAATATTTTCAGTTATGGAAGCTGAGGCTTATGGCAACTTTTATTGGCACTGTCTCTTGTCTTGTTaGATCTTGTGTGCTATCAAG | + |
Preference number: 5 (lower is better) Translates to: LQIFSVMEAEAYGNFYWHCLLSC*ILCAIK Trigger: CTTGATAGCACACAAGATCAAACAAGACAAGAGACA...GTGCCAATAAAAGTTGCCATAAGCCTCAGCTTCCATAACTGAAAATATTTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS-3UTR CAA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAAAGGATACAGATGACATaGTGGAATCTTCTCAGTGAA | + |
Preference number: 5 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKRIQMT*WNLLSE Trigger: TTCACTGAGAAGATTCCACAATGTCATCTGTATCCT...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS-3UTR CAA 90 bp | CCACTGCAGAACAAGTTAAAATCAAACCTGAAGTGGTACAAATCTAACAGAAAAAGAAGAAGCATAAAGTaGTTTTCCTTGGAGACAGTC | + |
Preference number: 5 (lower is better) Translates to: PLQNKLKSNLKWYKSNRKRRSIK*FSLETV Trigger: GACTGTCTCCAAGGAAAACAACTTTATGCTTCTTCT...TTTTCTGTTAGATTTGTACCACTTCAGGTTTGATTTTAACTTGTTCTGCAGTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 90 bp | GGTGCTAACAGGCACAGTTCACAAAAGGCATGTCCACATGGAAACTaGTGGTGGTCACCGGAGGCAACGGACACCTTCCTTCCACACCGA | + |
Preference number: 6 (lower is better) Translates to: GANRHSSQKACPHGN*WWSPEATDTFLPHR Trigger: TCGGTGTGGAAGGAAGGTGTCCGTTGCCTCCGGTGACCACCACAAGTTTCCATGTGGACATGCCTTTTGTGAACTGTGCCTGTTAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS GCA 72 bp | GACGTAGTTTCATCCGGTGAGACAATGTGCTTCACTTaGACGGCAAACAGCTCCTCTGGTGGAGGCAGAAGG | + |
Preference number: 6 (lower is better) Translates to: DVVSSGETMCFT*TANSSSGGGRR Trigger: CCTTCTGCCTCCACCAGAGGAGCTGTTTGCCGTGCAAGTGAAGCACATTGTCTCACCGGATGAAACTACGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225737.2 |
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CDS GCA 72 bp | AGGGGAGGAAACGTCTCCACGTTCTTGTTAAATCTCTaGAGCGCTTCCTCCAGGTTCTCTGACTCTGACTCC | + |
Preference number: 6 (lower is better) Translates to: RGGNVSTFLLNL*SASSRFSDSDS Trigger: GGAGTCAGAGTCAGAGAACCTGGAGGAAGCGCTGCAGAGATTTAACAAGAACGTGGAGACGTTTCCTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CCA 72 bp | AGTTCACAAAAGGCATGTCCACATGGAAACTTGTGGTaGTCACCGGAGGCAACGGACACCTTCCTTCCACAC | + |
Preference number: 6 (lower is better) Translates to: SSQKACPHGNLW*SPEATDTFLPH Trigger: GTGTGGAAGGAAGGTGTCCGTTGCCTCCGGTGACCACCACAAGTTTCCATGTGGACATGCCTTTTGTGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS CCA 72 bp | CACAGTTCACAAAAGGCATGTCCACATGGAAACTTGTaGTGGTCACCGGAGGCAACGGACACCTTCCTTCCA | + |
Preference number: 6 (lower is better) Translates to: HSSQKACPHGNL*WSPEATDTFLP Trigger: TGGAAGGAAGGTGTCCGTTGCCTCCGGTGACCACCACAAGTTTCCATGTGGACATGCCTTTTGTGAACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS CAA 72 bp | AGGCACAGTTCACAAAAGGCATGTCCACATGGAAACTaGTGGTGGTCACCGGAGGCAACGGACACCTTCCTT | + |
Preference number: 6 (lower is better) Translates to: RHSSQKACPHGN*WWSPEATDTFL Trigger: AAGGAAGGTGTCCGTTGCCTCCGGTGACCACCACAAGTTTCCATGTGGACATGCCTTTTGTGAACTGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS CAA 72 bp | TGGACCCTGATGGTGCCTCCCACAACCTCCATAACTTaGCCACGGTACCACAAAGTATCAGATCCTCTCACT | + |
Preference number: 6 (lower is better) Translates to: WTLMVPPTTSIT*PRYHKVSDPLT Trigger: AGTGAGAGGATCTGATACTTTGTGGTACCGTGGCAAAGTTATGGAGGTTGTGGGAGGCACCATCAGGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 72 bp | GGGAGGTTTAAACCCTGCCAAGAGCACCTTTATGGCTaGGGCTGGGTACTGCATAAGCTGAACAGGAATCTG | + |
Preference number: 6 (lower is better) Translates to: GRFKPCQEHLYG*GWVLHKLNRNL Trigger: CAGATTCCTGTTCAGCTTATGCAGTACCCAGCCCAAGCCATAAAGGTGCTCTTGGCAGGGTTTAAACCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 90 bp | CCAGTGAGGTGCAGTGACAGACAGTCACAAGCTGTTGCTGTCCACTaGTCACTTCCGCCAGTTGGCCTTATATCAACAAGTGAACATTCC | + |
Preference number: 6 (lower is better) Translates to: PVRCSDRQSQAVAVH*SLPPVGLISTSEHS Trigger: GGAATGTTCACTTGTTGATATAAGGCCAACTGGCGGAAGTGACAAGTGGACAGCAACAGCTTGTGACTGTCTGTCACTGCACCTCACTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 90 bp | TCTAAATACTGGACCCTGATGGTGCCTCCCACAACCTCCATAACTTaGCCACGGTACCACAAAGTATCAGATCCTCTCACTGCACAAGGC | + |
Preference number: 6 (lower is better) Translates to: SKYWTLMVPPTTSIT*PRYHKVSDPLTAQG Trigger: GCCTTGTGCAGTGAGAGGATCTGATACTTTGTGGTACCGTGGCAAAGTTATGGAGGTTGTGGGAGGCACCATCAGGGTCCAGTATTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 90 bp | ATCTCTGAGCTAAAATCCGTCAGGGGAGGAAACGTCTCCACGTTCTaGTTAAATCTCTGCAGCGCTTCCTCCAGGTTCTCTGACTCTGAC | + |
Preference number: 6 (lower is better) Translates to: ISELKSVRGGNVSTF*LNLCSASSRFSDSD Trigger: GTCAGAGTCAGAGAACCTGGAGGAAGCGCTGCAGAGATTTAACAAGAACGTGGAGACGTTTCCTCCCCTGACGGATTTTAGCTCAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS TCA 72 bp | TCGGTGGCAAGGCTTCCAGAGAAGAATCTTCCTCGATaGAGCCATCTACTGGGTAGTGACCTTGATTCATGC | + |
Preference number: 6 (lower is better) Translates to: SVARLPEKNLPR*SHLLGSDLDSC Trigger: GCATGAATCAAGGTCACTACCCAGTAGATGGCTTCATCGAGGAAGATTCTTCTCTGGAAGCCTTGCCACCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS GCA 72 bp | TCCTGTAAGATTATGGTTGCTATGGCTCCAGTGAGGTaGAGTGACAGACAGTCACAAGCTGTTGCTGTCCAC | + |
Preference number: 6 (lower is better) Translates to: SCKIMVAMAPVR*SDRQSQAVAVH Trigger: GTGGACAGCAACAGCTTGTGACTGTCTGTCACTGCACCTCACTGGAGCCATAGCAACCATAATCTTACAGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS GCA 72 bp | ATATACATTTCATCCGGTGAGACAATGTGCTTCACTTaGACGGCAAACAGCTCCTCTGGTGGAGGCAGAAGG | + |
Preference number: 6 (lower is better) Translates to: IYISSGETMCFT*TANSSSGGGRR Trigger: CCTTCTGCCTCCACCAGAGGAGCTGTTTGCCGTGCAAGTGAAGCACATTGTCTCACCGGATGAAATGTATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CCA 72 bp | TCTGAGAATCTGGCCTCTTCGCCACTGATTTTTAGCTaGGACCTTAACAGCGCAGTGCATATCACACTCCCA | + |
Preference number: 6 (lower is better) Translates to: SENLASSPLIFS*DLNSAVHITLP Trigger: TGGGAGTGTGATATGCACTGCGCTGTTAAGGTCCCAGCTAAAAATCAGTGGCGAAGAGGCCAGATTCTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 72 bp | CTAAAATCCGTCAGGGGAGGAAACGTCTCCACGTTCTaGTTAAATCTCTGCAGCGCTTCCTCCAGGTTCTCT | + |
Preference number: 6 (lower is better) Translates to: LKSVRGGNVSTF*LNLCSASSRFS Trigger: AGAGAACCTGGAGGAAGCGCTGCAGAGATTTAACAAGAACGTGGAGACGTTTCCTCCCCTGACGGATTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS TCA 72 bp | TGCTTTCCTGTAAGATTATGGTTGCTATGGCTCCAGTaGGGTGCAGTGACAGACAGTCACAAGCTGTTGCTG | + |
Preference number: 6 (lower is better) Translates to: CFPVRLWLLWLQ*GAVTDSHKLLL Trigger: CAGCAACAGCTTGTGACTGTCTGTCACTGCACCTCACTGGAGCCATAGCAACCATAATCTTACAGGAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS GCA 72 bp | TTTTTCCCTTCTAAATGCCTGTCAGGGGCCTCTGCTTaGAAAGGAGGTTCAGGTGTTTCATCAGTCAGGACA | + |
Preference number: 6 (lower is better) Translates to: FFPSKCLSGASA*KGGSGVSSVRT Trigger: TGTCCTGACTGATGAAACACCTGAACCTCCTTTGCAAGCAGAGGCCCCTGACAGGCATTTAGAAGGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS GCA 72 bp | TTTGCCACGGTACCACAAAGTATCAGATCCTCTCACTaGACAAGGCTCTCCCTTTTTCCAGGAATATGGCTC | + |
Preference number: 6 (lower is better) Translates to: FATVPQSIRSSH*TRLSLFPGIWL Trigger: GAGCCATATTCCTGGAAAAAGGGAGAGCCTTGTGCAGTGAGAGGATCTGATACTTTGTGGTACCGTGGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 72 bp | TCCACTTTTGCCTCCTTTTCCCAGCCCTCAGTTGAATaGTATGGGACGATGTCTTTCAAGGAGCACAGGTGT | + |
Preference number: 6 (lower is better) Translates to: STFASFSQPSVE*YGTMSFKEHRC Trigger: ACACCTGTGCTCCTTGAAAGACATCGTCCCATACAATTCAACTGAGGGCTGGGAAAAGGAGGCAAAAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 72 bp | TGCAGTGACAGACAGTCACAAGCTGTTGCTGTCCACTaGTCACTTCCGCCAGTTGGCCTTATATCAACAAGT | + |
Preference number: 6 (lower is better) Translates to: CSDRQSQAVAVH*SLPPVGLISTS Trigger: ACTTGTTGATATAAGGCCAACTGGCGGAAGTGACAAGTGGACAGCAACAGCTTGTGACTGTCTGTCACTGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS TCA 72 bp | TCTGTAACCATTCTGAGAATCTGGCCTCTTCGCCACTaGTTTTTAGCTGGGACCTTAACAGCGCAGTGCATA | + |
Preference number: 6 (lower is better) Translates to: SVTILRIWPLRH*FLAGTLTAQCI Trigger: TATGCACTGCGCTGTTAAGGTCCCAGCTAAAAATCAGTGGCGAAGAGGCCAGATTCTCAGAATGGTTACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS GCA 72 bp | CAGAAGTCACTTAGTGTAATATGCTGTTCACCATCATaGTCTGGTCCCTCATGTGTGTCACCAACTCCTGTG | + |
Preference number: 6 (lower is better) Translates to: QKSLSVICCSPS*SGPSCVSPTPV Trigger: CACAGGAGTTGGTGACACACATGAGGGACCAGAGCATGATGGTGAACAGCATATTACACTAAGTGACTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS GCA 72 bp | TCAAGGCAAATATACATTTCATCCGGTGAGACAATGTaGTTCACTTGCACGGCAAACAGCTCCTCTGGTGGA | + |
Preference number: 6 (lower is better) Translates to: SRQIYISSGETM*FTCTANSSSGG Trigger: TCCACCAGAGGAGCTGTTTGCCGTGCAAGTGAAGCACATTGTCTCACCGGATGAAATGTATATTTGCCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 90 bp | TCCACAGCCTTTGAGGGAGAATCACTTTCTCTCTCACTTACTGAATaGTATGGGACGATGTCTTTCAAGGAGCACAGGTGTGCTAAATGT | + |
Preference number: 6 (lower is better) Translates to: STAFEGESLSLSLTE*YGTMSFKEHRCAKC Trigger: ACATTTAGCACACCTGTGCTCCTTGAAAGACATCGTCCCATACAATTCAGTAAGTGAGAGAGAAAGTGATTCTCCCTCAAAGGCTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS TCA 72 bp | ATCTTCAGAGTCAAGGCAAATATACATTTCATCCGGTaGGACAATGTGCTTCACTTGCACGGCAAACAGCTC | + |
Preference number: 6 (lower is better) Translates to: IFRVKANIHFIR*DNVLHLHGKQL Trigger: GAGCTGTTTGCCGTGCAAGTGAAGCACATTGTCTCACCGGATGAAATGTATATTTGCCTTGACTCTGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 72 bp | AATTTCCTCAATTATCACATCAGGGCTGGATCCCAGTaGAGGCAGTACAGCAATAGTCTTAGGAGATGTCAC | + |
Preference number: 6 (lower is better) Translates to: NFLNYHIRAGSQ*RQYSNSLRRCH Trigger: GTGACATCTCCTAAGACTATTGCTGTACTGCCTCAACTGGGATCCAGCCCTGATGTGATAATTGAGGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS CAA 90 bp | TTCCTCAATAATTTCCTCAATTATCACATCAGGGCTGGATCCCAGTaGAGGCAGTACAGCAATAGTCTTAGGAGATGTCACCACAACCAT | + |
Preference number: 6 (lower is better) Translates to: FLNNFLNYHIRAGSQ*RQYSNSLRRCHHNH Trigger: ATGGTTGTGGTGACATCTCCTAAGACTATTGCTGTACTGCCTCAACTGGGATCCAGCCCTGATGTGATAATTGAGGAAATTATTGAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS GCA 72 bp | ATATCACACTCCCACTTAACAGGCTTCCATTCTGAGTaGTCATACGCTGCTACCATCTTCTCTTCTAAACTA | + |
Preference number: 6 (lower is better) Translates to: ISHSHLTGFHSE*SYAATIFSSKL Trigger: TAGTTTAGAAGAGAAGATGGTAGCAGCGTATGAGCACTCAGAATGGAAGCCTGTTAAGTGGGAGTGTGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CCA 72 bp | CAGTTGTATGAACCTCACAGTCAGTGCATTTACTTGTaGTATATTCTTGAGGTGCTAACAGGCACAGTTCAC | + |
Preference number: 6 (lower is better) Translates to: QLYEPHSQCIYL*YILEVLTGTVH Trigger: GTGAACTGTGCCTGTTAGCACCTCAAGAATATACCACAAGTAAATGCACTGACTGTGAGGTTCATACAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS CAA 72 bp | CATCTCGGCAGAAAATTTTCACAGGTAATGGCCACGTaGTGTTGCTTTCCTGTAAGATTATGGTTGCTATGG | + |
Preference number: 6 (lower is better) Translates to: HLGRKFSQVMAT*CCFPVRLWLLW Trigger: CCATAGCAACCATAATCTTACAGGAAAGCAACACAACGTGGCCATTACCTGTGAAAATTTTCTGCCGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 72 bp | TTTGAGGGAGAATCACTTTCTCTCTCACTTACTGAATaGTATGGGACGATGTCTTTCAAGGAGCACAGGTGT | + |
Preference number: 6 (lower is better) Translates to: FEGESLSLSLTE*YGTMSFKEHRC Trigger: ACACCTGTGCTCCTTGAAAGACATCGTCCCATACAATTCAGTAAGTGAGAGAGAAAGTGATTCTCCCTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223627.2 |
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CDS CAA 90 bp | GCACCTAGTTCCAAAATGTCTGAAGGATCAAGGTGTAAGCTCCTATaGCAAACTTGCTTCATCTTCTTCTCCAATATTGTTGCATCTTTT | + |
Preference number: 6 (lower is better) Translates to: APSSKMSEGSRCKLL*QTCFIFFSNIVASF Trigger: AAAAGATGCAACAATATTGGAGAAGAAGATGAAGCAAGTTTGCAATAGGAGCTTACACCTTGATCCTTCAGACATTTTGGAACTAGGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS TCA 72 bp | AAAATCAGTAGGACTATTTATATGGCAAACCATGACTaGAACTTCAGTCATCTCTTCAGGCAAAATGGGTGG | + |
Preference number: 6 (lower is better) Translates to: KISRTIYMANHD*NFSHLFRQNGW Trigger: CCACCCATTTTGCCTGAAGAGATGACTGAAGTTTCAGTCATGGTTTGCCATATAAATAGTCCTACTGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095793.3 |
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CDS CAA 72 bp | CAATTTCTTCTGTCTCCGACATTACAGCTGATGGGTTaGAAACATTCCTATGTATGGAGGATGAATGTTCTA | + |
Preference number: 6 (lower is better) Translates to: QFLLSPTLQLMG*KHSYVWRMNVL Trigger: TAGAACATTCATCCTCCATACATAGGAATGTTTCAAACCCATCAGCTGTAATGTCGGAGACAGAAGAAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS CAA 90 bp | GGTGTAAGCTCCTATTGCAAACTTGCTTCATCTTCTTCTCCAATATaGTTGCATCTTTTATTTGTGAATATTTCCGCACATAGAAGTGGC | + |
Preference number: 6 (lower is better) Translates to: GVSSYCKLASSSSPI*LHLLFVNISAHRSG Trigger: GCCACTTCTATGTGCGGAAATATTCACAAATAAAAGATGCAACAATATTGGAGAAGAAGATGAAGCAAGTTTGCAATAGGAGCTTACACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS TCA 72 bp | ACAGCCTCTGTTAGACTGTGTGTCTCTTGTCTTGTTTaGTCTTGTGTGCTATCAAGCATTTTTATAGCATTA | + |
Preference number: 6 (lower is better) Translates to: TASVRLCVSCLV*SCVLSSIFIAL Trigger: TAATGCTATAAAAATGCTTGATAGCACACAAGATCAAACAAGACAAGAGACACACAGTCTAACAGAGGCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |
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CDS CAA 72 bp | TCCAAAATGTCTGAAGGATCAAGGTGTAAGCTCCTATaGCAAACTTGCTTCATCTTCTTCTCCAATATTGTT | + |
Preference number: 6 (lower is better) Translates to: SKMSEGSRCKLL*QTCFIFFSNIV Trigger: AACAATATTGGAGAAGAAGATGAAGCAAGTTTGCAATAGGAGCTTACACCTTGATCCTTCAGACATTTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095793.3 ENSMUST00000223627.2 |