Pregenerated sensors for RNF168 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014074Ensembl transcript IDs: ENSMUST00000014218.15, ENSMUST00000171474.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGACAGGCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTaGGCCATCATGTGGTTGCTGGGATTTGAACTTGCGACCTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: SDRPEEGIRSHYGWL*AIMWLLGFELATFR Trigger: TCTGAAGGTCGCAAGTTCAAATCCCAGCAACCACATGATGGCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGCCTGTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR TCA 90 bp | GAAGAGCAGCTGACCTTCAGAAGAGCAGTCTGCGCTCTTAACCGCTaGGCCATCTCTCCAGTCCGATACTTACCTATTTTAATTCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: EEQLTFRRAVCALNR*AISPVRYLPILIQR Trigger: CCTTTGAATTAAAATAGGTAAGTATCGGACTGGAGAGATGGCTCAGCGGTTAAGAGCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR TCA 90 bp | ATGTTCTGCTACAAGAAGCCTGAAGTCCATGTTGGACCCAGTTTCTaGTTACCCATTCAGTTCCAGGGATTCCCTACCTACCAATCCACC | + |
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Preference number: 1 (lower is better) Translates to: MFCYKKPEVHVGPSF*LPIQFQGFPTYQST Trigger: GGTGGATTGGTAGGTAGGGAATCCCTGGAACTGAATGGGTAATCAGAAACTGGGTCCAACATGGACTTCAGGCTTCTTGTAGCAGAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR TCA 90 bp | CTGCCACTTAAAGGGATTAAAGAGAATGTTCTGCTACAAGAAGCCTaGAGTCCATGTTGGACCCAGTTTCTGATTACCCATTCAGTTCCA | + |
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Preference number: 1 (lower is better) Translates to: LPLKGIKENVLLQEA*SPCWTQFLITHSVP Trigger: TGGAACTGAATGGGTAATCAGAAACTGGGTCCAACATGGACTTCAGGCTTCTTGTAGCAGAACATTCTCTTTAATCCCTTTAAGTGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR TCA 90 bp | AAATTCTTCCTTTGTAACCAAACCTCAGAGAGTAAGCAAGCTTGCTaGGCAGAATGTGAGACATCTCAGGATATTAGGACAGAAGAGCTA | + |
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Preference number: 1 (lower is better) Translates to: KFFLCNQTSESKQAC*AECETSQDIRTEEL Trigger: TAGCTCTTCTGTCCTAATATCCTGAGATGTCTCACATTCTGCTCAGCAAGCTTGCTTACTCTCTGAGGTTTGGTTACAAAGGAAGAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR CCA 90 bp | CCAAACACTGCATTAGGACAGTTTATTATGTTCACAGGAAATAAATaGAGCCAAGACACCAGAAGAGAATCTACTGAAACTACAGCTTGC | + |
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Preference number: 1 (lower is better) Translates to: PNTALGQFIMFTGNK*SQDTRRESTETTAC Trigger: GCAAGCTGTAGTTTCAGTAGATTCTCTTCTGGTGTCTTGGCTCCATTTATTTCCTGTGAACATAATAAACTGTCCTAATGCAGTGTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171474.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGCTTCAGAAGAGCAGCTaGCCTTCAGAAGAGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: GLELRNLPASASRVLGLKLQKSS*PSEEQS Trigger: AGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAG...CTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGAGCCATCATGTGGTTaGTGGGATTTGAACTTGCGA | + |
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Preference number: 2 (lower is better) Translates to: GLELRNLPASASRVLGLKEPSCG*WDLNLR Trigger: TCGCAAGTTCAAATCCCAGCAACCACATGATGGCTC...CTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGCCATCATGTGGTTGCTaGGATTTGAACTTGCGACCT | + |
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Preference number: 2 (lower is better) Translates to: GLELRNLPASASRVLGLKPSCGC*DLNLRP Trigger: AGGTCGCAAGTTCAAATCCCAGCAACCACATGATGG...CTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR GCA 90 bp | CATGTGTCTGAGCCAGTAAGCAGCGAGGATGGTAAAGCCAGGTGTTCGACAGCACCTCTCACACCAAGATaGCATGGAGGGAAAAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HVSEPVSSEDGKARCSTAPLTPR*HGGKSC Trigger: ACAGCTTTTCCCTCCATGGCATCTTGGTGTGAGAGG...TGCTGTCGAACACCTGGCTTTACCATCCTCGCTGCTTACTGGCTCAGACACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR CCA 90 bp | CACCATTTTCCATCTGTGCGCACATACAAGCATGTGTCTGAGCCAGTAAGCAGCCCAGCAACCACACGGTaGCTCACAACCACTCGTAAT | + |
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Preference number: 2 (lower is better) Translates to: HHFPSVRTYKHVSEPVSSPATTR*LTTTRN Trigger: ATTACGAGTGGTTGTGAGCCACCGTGTGGTTGCTGG...GCTGCTTACTGGCTCAGACACATGCTTGTATGTGCGCACAGATGGAAAATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTGATTACCCATTCAGTTCCAGGGATTCCCTACCTACCAATCCACCACTCGTGGTTGCTGGGATTTaGACTTGCGACCTTCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: VSDYPFSSRDSLPTNPPLVVAGI*TCDLQK Trigger: CTTCTGAAGGTCGCAAGTTCAAATCCCAGCAACCAC...GAGTGGTGGATTGGTAGGTAGGGAATCCCTGGAACTGAATGGGTAATCAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR TCA 90 bp | CACCATTTTCCATCTGTGCGCACATACAAGCATGTGTCTGAGCCAGTAAGCAGCCTCTTCTGGTCTGTCTaGAGTCAGCTACAGTGTACT | + |
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Preference number: 2 (lower is better) Translates to: HHFPSVRTYKHVSEPVSSLFWSV*SQLQCT Trigger: AGTACACTGTAGCTGACTTCAGACAGACCAGAAGAG...GCTGCTTACTGGCTCAGACACATGCTTGTATGTGCGCACAGATGGAAAATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR TCA 90 bp | CACCATTTTCCATCTGTGCGCACATACAAGCATGTGTCTGAGCCAGTAAGCAGCAGTAAGCAAGCTTGCTaGGCAGAATGTGAGACATCT | + |
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Preference number: 2 (lower is better) Translates to: HHFPSVRTYKHVSEPVSSSKQAC*AECETS Trigger: AGATGTCTCACATTCTGCTCAGCAAGCTTGCTTACT...GCTGCTTACTGGCTCAGACACATGCTTGTATGTGCGCACAGATGGAAAATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTCTGAGCCAGTAAGCAGCGAGGATGGTAAAGCCAGGTGTTCGACAGCACATCAGATCTCATTATaGATGGTTGTGAGCCATCAT | + |
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Preference number: 2 (lower is better) Translates to: HVSEPVSSEDGKARCSTAHQISL*MVVSHH Trigger: ATGATGGCTCACAACCATCCATAATGAGATCTGATG...TGCTGTCGAACACCTGGCTTTACCATCCTCGCTGCTTACTGGCTCAGACACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR GCA 90 bp | CACCATTTTCCATCTGTGCGCACATACAAGCATGTGTCTGAGCCAGTAAGCAGCTTAAAGAGAATGTTCTaGTACAAGAAGCCTGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: HHFPSVRTYKHVSEPVSSLKRMF*YKKPEV Trigger: GACTTCAGGCTTCTTGTAGCAGAACATTCTCTTTAA...GCTGCTTACTGGCTCAGACACATGCTTGTATGTGCGCACAGATGGAAAATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCCACTTAAAGGGATTAAAGAGAATGTTCTGCTACAAGAAGCCTGAAGTCCCATCATGTGGTTGCTaGGATTTGAACTTGCGACCT | + |
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Preference number: 2 (lower is better) Translates to: FCHLKGLKRMFCYKKPEVPSCGC*DLNLRP Trigger: AGGTCGCAAGTTCAAATCCCAGCAACCACATGATGG...GACTTCAGGCTTCTTGTAGCAGAACATTCTCTTTAATCCCTTTAAGTGGCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTAATTAGTGTTATGGAAGATACCTGTGTGGACTCCTTACCCATTCATTTAAGTAAGCAAGCTTGCTaGGCAGAATGTGAGACATCT | + |
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Preference number: 2 (lower is better) Translates to: ELISVMEDTCVDSLPIHLSKQAC*AECETS Trigger: AGATGTCTCACATTCTGCTCAGCAAGCTTGCTTACT...TAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAACACTAATTAGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATGATTGCCCACGGACAAACTGGTGGTAAATATATAAACTCTCACTATACCTTCACAGGAAATAAATaGAGCCAAGACACCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: RMIAHGQTGGKYINSHYTFTGNK*SQDTRR Trigger: TCTTCTGGTGTCTTGGCTCCATTTATTTCCTGTGAA...GGTATAGTGAGAGTTTATATATTTACCACCAGTTTGTCCGTGGGCAATCATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171474.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGACAGAAGAGCTAGCTTaGCAATACATCATTTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: GLELRNLPASASRVLGLKTEELA*QYIISG Trigger: TCCAGAAATGATGTATTGCAAAGCTAGCTCTTCTGT...CTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR CAA 90 bp | CACCATTTTCCATCTGTGCGCACATACAAGCATGTGTCTGAGCCAGTAAGCAGCTGCTGGGATTTGAACTaGCGACCTTCAGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: HHFPSVRTYKHVSEPVSSCWDLN*RPSEEQ Trigger: CTGCTCTTCTGAAGGTCGCAAGTTCAAATCCCAGCA...GCTGCTTACTGGCTCAGACACATGCTTGTATGTGCGCACAGATGGAAAATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR CAA 90 bp | CATGTGTCTGAGCCAGTAAGCAGCGAGGATGGTAAAGCCAGGTGTTCGACAGCAAAACAATTCCCAAGGTaGTTTCCTACTAGCCGTCTT | + |
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Preference number: 3 (lower is better) Translates to: HVSEPVSSEDGKARCSTAKQFPR*FPTSRL Trigger: AAGACGGCTAGTAGGAAACAACCTTGGGAATTGTTT...TGCTGTCGAACACCTGGCTTTACCATCCTCGCTGCTTACTGGCTCAGACACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR TCA 72 bp | CTGACCTTCAGAAGAGCAGTCTGCGCTCTTAACCGCTaGGCCATCTCTCCAGTCCGATACTTACCTATTTTA | + |
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Preference number: 3 (lower is better) Translates to: LTFRRAVCALNR*AISPVRYLPIL Trigger: TAAAATAGGTAAGTATCGGACTGGAGAGATGGCTCAGCGGTTAAGAGCGCAGACTGCTCTTCTGAAGGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR CCA 72 bp | CTCATTATGGATGGTTGTGAGCCATCATGTGGTTGCTaGGATTTGAACTTGCGACCTTCAGAAGAGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: LIMDGCEPSCGC*DLNLRPSEEQL Trigger: CAGCTGCTCTTCTGAAGGTCGCAAGTTCAAATCCCAGCAACCACATGATGGCTCACAACCATCCATAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGGTCCTAAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCACTCGTAAGAACACTGCAGTTATaGACAATGGAAACAATTCCC | + |
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Preference number: 3 (lower is better) Translates to: EGPKFKSQQPHGGSQPLVRTLQL*TMETIP Trigger: GGGAATTGTTTCCATTGTCAATAACTGCAGTGTTCT...TACGAGTGGTTGTGAGCCACCGTGTGGTTGCTGGGATTTGAACTTAGGACCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR TCA 72 bp | TACAAGAAGCCTGAAGTCCATGTTGGACCCAGTTTCTaGTTACCCATTCAGTTCCAGGGATTCCCTACCTAC | + |
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Preference number: 3 (lower is better) Translates to: YKKPEVHVGPSF*LPIQFQGFPTY Trigger: GTAGGTAGGGAATCCCTGGAACTGAATGGGTAATCAGAAACTGGGTCCAACATGGACTTCAGGCTTCTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR GCA 72 bp | GATCTCATTATGGATGGTTGTGAGCCATCATGTGGTTaGTGGGATTTGAACTTGCGACCTTCAGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLIMDGCEPSCG*WDLNLRPSEEQ Trigger: CTGCTCTTCTGAAGGTCGCAAGTTCAAATCCCAGCAACCACATGATGGCTCACAACCATCCATAATGAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR CAA 90 bp | ATCATGTGGTTGCTGGGATTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTACAGAAGAGCTAGCTTaGCAATACATCATTTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: IMWLLGFELATFRRAADLTEELA*QYIISG Trigger: TCCAGAAATGATGTATTGCAAAGCTAGCTCTTCTGT...AAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAATCCCAGCAACCACATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR-3UTR CAA 90 bp | AGGATGATTGCCCACGGACAAACTGGTGGTAAATATATAAACTCTCACTATACCAGCCTGAAGTCCATGTaGGACCCAGTTTCTGATTAC | + |
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Preference number: 3 (lower is better) Translates to: RMIAHGQTGGKYINSHYTSLKSM*DPVSDY Trigger: GTAATCAGAAACTGGGTCCAACATGGACTTCAGGCT...GGTATAGTGAGAGTTTATATATTTACCACCAGTTTGTCCGTGGGCAATCATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171474.2 |
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| 3UTR TCA 72 bp | AAAGGGATTAAAGAGAATGTTCTGCTACAAGAAGCCTaGAGTCCATGTTGGACCCAGTTTCTGATTACCCAT | + |
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Preference number: 3 (lower is better) Translates to: KGIKENVLLQEA*SPCWTQFLITH Trigger: ATGGGTAATCAGAAACTGGGTCCAACATGGACTTCAGGCTTCTTGTAGCAGAACATTCTCTTTAATCCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR GCA 72 bp | ATTTTCTGCCACTTAAAGGGATTAAAGAGAATGTTCTaGTACAAGAAGCCTGAAGTCCATGTTGGACCCAGT | + |
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Preference number: 3 (lower is better) Translates to: IFCHLKGLKRMF*YKKPEVHVGPS Trigger: ACTGGGTCCAACATGGACTTCAGGCTTCTTGTAGCAGAACATTCTCTTTAATCCCTTTAAGTGGCAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR TCA 90 bp | CATTCAGTTCCAGGGATTCCCTACCTACCAATCCACCACTCAGCCCATGCCACTGTGCGTAGCTGGTACTaGTCTGGGGATCCTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HSVPGIPYLPIHHSAHATVRSWY*SGDPFC Trigger: GCAGAAAGGATCCCCAGATCAGTACCAGCTACGCAC...AGTGGCATGGGCTGAGTGGTGGATTGGTAGGTAGGGAATCCCTGGAACTGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR GCA 90 bp | TTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTCAGAAGAGCAGTCTGCGCTGGCCCGGGTATCCCTaGAGAAGACTCCGAACCTTG | + |
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Preference number: 4 (lower is better) Translates to: FELATFRRAADLQKSSLRWPGYP*RRLRTL Trigger: CAAGGTTCGGAGTCTTCTGCAGGGATACCCGGGCCA...GCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR GCA 90 bp | CATGTGTCTGAGCCAGTAAGCAGCGAGGATGGTAAAGCCAGGTGTTCGACAGCACTGTTGGAACTCTGTTaGCCCCAGTTAACTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: HVSEPVSSEDGKARCSTALLELC*PQLTGA Trigger: TGCCCCAGTTAACTGGGGGCAACAGAGTTCCAACAG...TGCTGTCGAACACCTGGCTTTACCATCCTCGCTGCTTACTGGCTCAGACACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR TCA 90 bp | GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGTCTGGGACTTGTTTGTaGCTGGATCTGATTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLELRNLPASASRVLGLKSGTCL*LDLIFW Trigger: CCAGAAAATCAGATCCAGTCACAAACAAGTCCCAGA...CTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR TCA 90 bp | CACCATTTTCCATCTGTGCGCACATACAAGCATGTGTCTGAGCCAGTAAGCAGCGTGCGTAGCTGGTACTaGTCTGGGGATCCTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HHFPSVRTYKHVSEPVSSVRSWY*SGDPFC Trigger: GCAGAAAGGATCCCCAGATCAGTACCAGCTACGCAC...GCTGCTTACTGGCTCAGACACATGCTTGTATGTGCGCACAGATGGAAAATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR GCA 90 bp | TTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTCAGAAGAGCAGTCTGCGCCTGTTGGAACTCTGTTaGCCCCAGTTAACTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FELATFRRAADLQKSSLRLLELC*PQLTGA Trigger: TGCCCCAGTTAACTGGGGGCAACAGAGTTCCAACAG...GCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR GCA 90 bp | TTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTCAGAAGAGCAGTCTGCGCTCTGGGGATCCTTTCTaGCGGTTTGGCACCATTTGC | + |
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Preference number: 4 (lower is better) Translates to: FELATFRRAADLQKSSLRSGDPF*RFGTIC Trigger: GCAAATGGTGCCAAACCGGCAGAAAGGATCCCCAGA...GCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR CCA 90 bp | GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGAGGGACAGCATAGATTaGCCTTTTCAACAGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: GLELRNLPASASRVLGLKRDSID*PFQQWT Trigger: AGTCCACTGTTGAAAAGGCCAATCTATGCTGTCCCT...CTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR TCA 90 bp | GAAGGTCCTAAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCACTCGTACCCACAGGTCTGTATTaGCCAGAGAATTTCTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: EGPKFKSQQPHGGSQPLVPTGLY*PENFFG Trigger: CCCGAAGAAATTCTCTGGTCAATACAGACCTGTGGG...TACGAGTGGTTGTGAGCCACCGTGTGGTTGCTGGGATTTGAACTTAGGACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR GCA 90 bp | TCTTCCTTTGTAACCAAACCTCAGAGAGTAAGCAAGCTTGCTGAGCAGAATGTGCTGGGGGTGAGGGTGTaGGTAGCTGGTACTGATCTG | + |
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Preference number: 4 (lower is better) Translates to: SSFVTKPQRVSKLAEQNVLGVRV*VAGTDL Trigger: CAGATCAGTACCAGCTACGCACACCCTCACCCCCAG...CACATTCTGCTCAGCAAGCTTGCTTACTCTCTGAGGTTTGGTTACAAAGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR CCA 90 bp | CATTCAGTTCCAGGGATTCCCTACCTACCAATCCACCACTCAGCCCATGCCACTTTTTCAACAGTGGACTaGAAGCATGGGTTACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: HSVPGIPYLPIHHSAHATFSTVD*KHGLQS Trigger: GCTCTGTAACCCATGCTTCCAGTCCACTGTTGAAAA...AGTGGCATGGGCTGAGTGGTGGATTGGTAGGTAGGGAATCCCTGGAACTGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR CAA 72 bp | GGTTGTGAGCCATCATGTGGTTGCTGGGATTTGAACTaGCGACCTTCAGAAGAGCAGCTGACCTTCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GCEPSCGCWDLN*RPSEEQLTFRR Trigger: TCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAATCCCAGCAACCACATGATGGCTCACAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| 3UTR CAA 72 bp | ATGGATGGTTGTGAGCCATCATGTGGTTGCTGGGATTaGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: MDGCEPSCGCWD*NLRPSEEQLTF Trigger: GAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAATCCCAGCAACCACATGATGGCTCACAACCATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
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| CDS-3UTR TCA 90 bp | CATGTGTCTGAGCCAGTAAGCAGCGAGGATGGTAAAGCCAGGTGTTCGACAGCAGTTTGTGACTGGATCTaGTTTTCTGGAACTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HVSEPVSSEDGKARCSTAVCDWI*FSGTQR Trigger: CCTTTGAGTTCCAGAAAATCAGATCCAGTCACAAAC...TGCTGTCGAACACCTGGCTTTACCATCCTCGCTGCTTACTGGCTCAGACACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTCAGAAGAGCAGTCTGCGCTCTGGGACTTGTTTGTaGCTGGATCTGATTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FELATFRRAADLQKSSLRSGTCL*LDLIFW Trigger: CCAGAAAATCAGATCCAGTCACAAACAAGTCCCAGA...GCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | CATGTGTCTGAGCCAGTAAGCAGCGAGGATGGTAAAGCCAGGTGTTCGACAGCAACTTCTGTTTCTTCTTaGTCTGAGGAGGATTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HVSEPVSSEDGKARCSTATSVSS*SEEDSM Trigger: CATCGAATCCTCCTCAGATCAAGAAGAAACAGAAGT...TGCTGTCGAACACCTGGCTTTACCATCCTCGCTGCTTACTGGCTCAGACACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGTCCTAAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCACTCGTATCAATTTCTGTGTCTTaGAACACAGGGCTCTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGPKFKSQQPHGGSQPLVSISVS*NTGLFV Trigger: CACGAAGAGCCCTGTGTTGCAAGACACAGAAATTGA...TACGAGTGGTTGTGAGCCACCGTGTGGTTGCTGGGATTTGAACTTAGGACCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCTGATTACCCATTCAGTTCCAGGGATTCCCTACCTACCAATCCACCACTCAGTGGACTGGAAGCATaGGTTACAGAGCGTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSDYPFSSRDSLPTNPPLSGLEA*VTERVV Trigger: AACCACACGCTCTGTAACCCATGCTTCCAGTCCACT...GAGTGGTGGATTGGTAGGTAGGGAATCCCTGGAACTGAATGGGTAATCAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGTCCTAAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCACTCGTAGCTGGCACTCATCAATaGTTTCCTTTGATTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGPKFKSQQPHGGSQPLVAGTHQ*FPLILV Trigger: GACAAGAATCAAAGGAAATCATTGATGAGTGCCAGC...TACGAGTGGTTGTGAGCCACCGTGTGGTTGCTGGGATTTGAACTTAGGACCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | GAACTAATTAGTGTTATGGAAGATACCTGTGTGGACTCCTTACCCATTCATTTAACTCCCCAGGTTCACTaGGCCGACGAACTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELISVMEDTCVDSLPIHLTPQVH*ADELAG Trigger: GCCAGCCAGTTCGTCGGCTCAGTGAACCTGGGGAGT...TAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAACACTAATTAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTCAGAAGAGCAGTCTGCGCGTTTGTGACTGGATCTaGTTTTCTGGAACTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FELATFRRAADLQKSSLRVCDWI*FSGTQR Trigger: CCTTTGAGTTCCAGAAAATCAGATCCAGTCACAAAC...GCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCTGATTACCCATTCAGTTCCAGGGATTCCCTACCTACCAATCCACCACTCGCTCAGCCTCCACCCTaGTTATCTCCTCTTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: VSDYPFSSRDSLPTNPPLAQPPP*LSPLHI Trigger: AATATGAAGAGGAGATAAGCAGGGTGGAGGCTGAGC...GAGTGGTGGATTGGTAGGTAGGGAATCCCTGGAACTGAATGGGTAATCAGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR GCA 90 bp | ATCATGTGGTTGCTGGGATTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTGCTCAGCCTCCACCCTaGTTATCTCCTCTTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: IMWLLGFELATFRRAADLAQPPP*LSPLHI Trigger: AATATGAAGAGGAGATAAGCAGGGTGGAGGCTGAGC...AAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAATCCCAGCAACCACATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCTGATTACCCATTCAGTTCCAGGGATTCCCTACCTACCAATCCACCACTCGAATTTCTTCGGGTATaGTACCGAGTCCACGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSDYPFSSRDSLPTNPPLEFLRV*YRVHEE Trigger: CTCTTCGTGGACTCGGTACCATACCCGAAGAAATTC...GAGTGGTGGATTGGTAGGTAGGGAATCCCTGGAACTGAATGGGTAATCAGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | ATCATGTGGTTGCTGGGATTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTTCAGCCAACAATCTCTaGATGTACTCCTCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IMWLLGFELATFRRAADLSANNL*MYSSLA Trigger: AGCCAGTGAGGAGTACATCCAGAGATTGTTGGCTGA...AAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAATCCCAGCAACCACATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTCAGAAGAGCAGTCTGCGCCTGGATCTGATTTTCTaGAACTCAAAGGAGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FELATFRRAADLQKSSLRLDLIF*NSKEKP Trigger: TGGCTTCTCCTTTGAGTTCCAGAAAATCAGATCCAG...GCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR GCA 90 bp | CACCATTTTCCATCTGTGCGCACATACAAGCATGTGTCTGAGCCAGTAAGCAGCCGGTTTGGCACCATTTaGTCTTTATCTACCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHFPSVRTYKHVSEPVSSRFGTI*SLSTSF Trigger: GAAAGAGGTAGATAAAGAGCAAATGGTGCCAAACCG...GCTGCTTACTGGCTCAGACACATGCTTGTATGTGCGCACAGATGGAAAATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR GCA 90 bp | GAGACATCTCAGGATATTAGGACAGAAGAGCTAGCTTTGCAATACATCATTTCTCTGGGGGTGAGGGTGTaGGTAGCTGGTACTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETSQDIRTEELALQYIISLGVRV*VAGTDL Trigger: CAGATCAGTACCAGCTACGCACACCCTCACCCCCAG...AGAAATGATGTATTGCAAAGCTAGCTCTTCTGTCCTAATATCCTGAGATGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTAGAGATGGCTCAGCAGGTAAGAGTGCTGCTGAAGGTCCTAAGTTCAAATTTTTCAACAGTGGACTaGAAGCATGGGTTACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVEMAQQVRVLLKVLSSNFSTVD*KHGLQS Trigger: GCTCTGTAACCCATGCTTCCAGTCCACTGTTGAAAA...ATTTGAACTTAGGACCTTCAGCAGCACTCTTACCTGCTGAGCCATCTCTACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | ATCATGTGGTTGCTGGGATTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTAGGGACAGCATAGATTaGCCTTTTCAACAGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: IMWLLGFELATFRRAADLRDSID*PFQQWT Trigger: AGTCCACTGTTGAAAAGGCCAATCTATGCTGTCCCT...AAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAATCCCAGCAACCACATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTAGAGATGGCTCAGCAGGTAAGAGTGCTGCTGAAGGTCCTAAGTTCAAATACTTCTGTTTCTTCTTaGTCTGAGGAGGATTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: AVEMAQQVRVLLKVLSSNTSVSS*SEEDSM Trigger: CATCGAATCCTCCTCAGATCAAGAAGAAACAGAAGT...ATTTGAACTTAGGACCTTCAGCAGCACTCTTACCTGCTGAGCCATCTCTACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTCAGAAGAGCAGTCTGCGCCTTGTATTTTTCTTCTaGGACTTGTTTGTGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FELATFRRAADLQKSSLRLVFFF*DLFVTG Trigger: TCCAGTCACAAACAAGTCCCAGAAGAAAAATACAAG...GCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| 3UTR CAA 72 bp | AGAGAATGTTCTGCTACAAGAAGCCTGAAGTCCATGTaGGACCCAGTTTCTGATTACCCATTCAGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RECSATRSLKSM*DPVSDYPFSSR Trigger: CCTGGAACTGAATGGGTAATCAGAAACTGGGTCCAACATGGACTTCAGGCTTCTTGTAGCAGAACATTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | GAGACATCTCAGGATATTAGGACAGAAGAGCTAGCTTTGCAATACATCATTTCTTTTCCTCTTCCTTGCTaGCTTGTCGCTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETSQDIRTEELALQYIISFPLPC*LVAQPP Trigger: TGGAGGCTGAGCGACAAGCCAGCAAGGAAGAGGAAA...AGAAATGATGTATTGCAAAGCTAGCTCTTCTGTCCTAATATCCTGAGATGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | GAACTAATTAGTGTTATGGAAGATACCTGTGTGGACTCCTTACCCATTCATTTATTGCCCCCAGTTAACTaGGGCACACCTGTCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELISVMEDTCVDSLPIHLLPPVN*GTPVTE Trigger: CTCTGTGACAGGTGTGCCCCAGTTAACTGGGGGCAA...TAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAACACTAATTAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | GAGACATCTCAGGATATTAGGACAGAAGAGCTAGCTTTGCAATACATCATTTCTCCCACAGGTCTGTATTaGCCAGAGAATTTCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETSQDIRTEELALQYIISPTGLY*PENFFG Trigger: CCCGAAGAAATTCTCTGGTCAATACAGACCTGTGGG...AGAAATGATGTATTGCAAAGCTAGCTCTTCTGTCCTAATATCCTGAGATGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCCTTTGTAACCAAACCTCAGAGAGTAAGCAAGCTTGCTGAGCAGAATGTGGCTGGCACTCATCAATaGTTTCCTTTGATTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSFVTKPQRVSKLAEQNVAGTHQ*FPLILV Trigger: GACAAGAATCAAAGGAAATCATTGATGAGTGCCAGC...CACATTCTGCTCAGCAAGCTTGCTTACTCTCTGAGGTTTGGTTACAAAGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | GAGACATCTCAGGATATTAGGACAGAAGAGCTAGCTTTGCAATACATCATTTCTTCTCATAGTTGCTGTTaGTACTGGTGCTCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETSQDIRTEELALQYIISSHSCC*YWCSGS Trigger: GGAGCCTGAGCACCAGTATCAACAGCAACTATGAGA...AGAAATGATGTATTGCAAAGCTAGCTCTTCTGTCCTAATATCCTGAGATGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCTGATTACCCATTCAGTTCCAGGGATTCCCTACCTACCAATCCACCACTCCTGAGGAGGATTCGATaGATATTTTCCTTCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSDYPFSSRDSLPTNPPLLRRIR*IFSFFL Trigger: CAAAAAGAAGGAAAATATTCATCGAATCCTCCTCAG...GAGTGGTGGATTGGTAGGTAGGGAATCCCTGGAACTGAATGGGTAATCAGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTAGAGATGGCTCAGCAGGTAAGAGTGCTGCTGAAGGTCCTAAGTTCAAATCTGAGGAGGATTCGATaGATATTTTCCTTCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AVEMAQQVRVLLKVLSSNLRRIR*IFSFFL Trigger: CAAAAAGAAGGAAAATATTCATCGAATCCTCCTCAG...ATTTGAACTTAGGACCTTCAGCAGCACTCTTACCTGCTGAGCCATCTCTACAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTTTGTAACCAAACCTCAGAGAGTAAGCAAGCTTGCTGAGCAGAATGTGCTGTCCTGCTCTTCTTaGTTATGTCTCTCAAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSFVTKPQRVSKLAEQNVLSCSS*LCLSKS Trigger: GCTTTTTGAGAGACATAAGCAAGAAGAGCAGGACAG...CACATTCTGCTCAGCAAGCTTGCTTACTCTCTGAGGTTTGGTTACAAAGGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR GCA 90 bp | CACCATTTTCCATCTGTGCGCACATACAAGCATGTGTCTGAGCCAGTAAGCAGCGAAACATTTGAACAATaGTTCTCTGGGACTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HHFPSVRTYKHVSEPVSSETFEQ*FSGTFY Trigger: ATAGAAAGTCCCAGAGAAGCATTGTTCAAATGTTTC...GCTGCTTACTGGCTCAGACACATGCTTGTATGTGCGCACAGATGGAAAATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | GAACTAATTAGTGTTATGGAAGATACCTGTGTGGACTCCTTACCCATTCATTTATTTCCTCTTCCTTGCTaGCTTGTCGCTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELISVMEDTCVDSLPIHLFPLPC*LVAQPP Trigger: TGGAGGCTGAGCGACAAGCCAGCAAGGAAGAGGAAA...TAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAACACTAATTAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTTTGTAACCAAACCTCAGAGAGTAAGCAAGCTTGCTGAGCAGAATGTGCTGGATCTGATTTTCTaGAACTCAAAGGAGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSFVTKPQRVSKLAEQNVLDLIF*NSKEKP Trigger: TGGCTTCTCCTTTGAGTTCCAGAAAATCAGATCCAG...CACATTCTGCTCAGCAAGCTTGCTTACTCTCTGAGGTTTGGTTACAAAGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCACTTAAAGGGATTAAAGAGAATGTTCTGCTACAAGAAGCCTGAAGTCTCAATTTCTGTGTCTTaGAACACAGGGCTCTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FCHLKGLKRMFCYKKPEVSISVS*NTGLFV Trigger: CACGAAGAGCCCTGTGTTGCAAGACACAGAAATTGA...GACTTCAGGCTTCTTGTAGCAGAACATTCTCTTTAATCCCTTTAAGTGGCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTAGAGATGGCTCAGCAGGTAAGAGTGCTGCTGAAGGTCCTAAGTTCAAATGAAACATTTGAACAATaGTTCTCTGGGACTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AVEMAQQVRVLLKVLSSNETFEQ*FSGTFY Trigger: ATAGAAAGTCCCAGAGAAGCATTGTTCAAATGTTTC...ATTTGAACTTAGGACCTTCAGCAGCACTCTTACCTGCTGAGCCATCTCTACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | GAACTAATTAGTGTTATGGAAGATACCTGTGTGGACTCCTTACCCATTCATTTAAGTGGACTGGAAGCATaGGTTACAGAGCGTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELISVMEDTCVDSLPIHLSGLEA*VTERVV Trigger: AACCACACGCTCTGTAACCCATGCTTCCAGTCCACT...TAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAACACTAATTAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | GAGACATCTCAGGATATTAGGACAGAAGAGCTAGCTTTGCAATACATCATTTCTGAATTTCTTCGGGTATaGTACCGAGTCCACGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ETSQDIRTEELALQYIISEFLRV*YRVHEE Trigger: CTCTTCGTGGACTCGGTACCATACCCGAAGAAATTC...AGAAATGATGTATTGCAAAGCTAGCTCTTCTGTCCTAATATCCTGAGATGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTTTATACCTGTAAAGATGCCACACTTAGAACACTGCAGTTATTGACAATGTCTCATAGTTGCTGTTaGTACTGGTGCTCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFYTCKDATLRTLQLLTMSHSCC*YWCSGS Trigger: GGAGCCTGAGCACCAGTATCAACAGCAACTATGAGA...CATTGTCAATAACTGCAGTGTTCTAAGTGTGGCATCTTTACAGGTATAAAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTATACCTGTAAAGATGCCACACTTAGAACACTGCAGTTATTGACAATGTGGCCTTTTCAACAGTaGACTGGAAGCATGGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CFYTCKDATLRTLQLLTMWPFQQ*TGSMGY Trigger: GTAACCCATGCTTCCAGTCCACTGTTGAAAAGGCCA...CATTGTCAATAACTGCAGTGTTCTAAGTGTGGCATCTTTACAGGTATAAAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| 3UTR CAA 72 bp | ACCTGTAAAGATGCCACACTTAGAACACTGCAGTTATaGACAATGGAAACAATTCCCAAGGTTGTTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TCKDATLRTLQL*TMETIPKVVSY Trigger: GTAGGAAACAACCTTGGGAATTGTTTCCATTGTCAATAACTGCAGTGTTCTAAGTGTGGCATCTTTACAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR GCA 90 bp | GAACTAATTAGTGTTATGGAAGATACCTGTGTGGACTCCTTACCCATTCATTTACTGTCCTGCTCTTCTTaGTTATGTCTCTCAAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELISVMEDTCVDSLPIHLLSCSS*LCLSKS Trigger: GCTTTTTGAGAGACATAAGCAAGAAGAGCAGGACAG...TAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAACACTAATTAGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR GCA 90 bp | GAACTAATTAGTGTTATGGAAGATACCTGTGTGGACTCCTTACCCATTCATTTACGGTTTGGCACCATTTaGTCTTTATCTACCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELISVMEDTCVDSLPIHLRFGTI*SLSTSF Trigger: GAAAGAGGTAGATAAAGAGCAAATGGTGCCAAACCG...TAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAACACTAATTAGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | GAGACATCTCAGGATATTAGGACAGAAGAGCTAGCTTTGCAATACATCATTTCTCTTGTATTTTTCTTCTaGGACTTGTTTGTGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETSQDIRTEELALQYIISLVFFF*DLFVTG Trigger: TCCAGTCACAAACAAGTCCCAGAAGAAAAATACAAG...AGAAATGATGTATTGCAAAGCTAGCTCTTCTGTCCTAATATCCTGAGATGTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | GAGACATCTCAGGATATTAGGACAGAAGAGCTAGCTTTGCAATACATCATTTCTTCAAATACAGATTCCTaGTTTTCTCTGTCGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: ETSQDIRTEELALQYIISSNTDS*FSLSEI Trigger: GATTTCCGACAGAGAAAACCAGGAATCTGTATTTGA...AGAAATGATGTATTGCAAAGCTAGCTCTTCTGTCCTAATATCCTGAGATGTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CCA 90 bp | GAACTAATTAGTGTTATGGAAGATACCTGTGTGGACTCCTTACCCATTCATTTATCAAATACAGATTCCTaGTTTTCTCTGTCGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: ELISVMEDTCVDSLPIHLSNTDS*FSLSEI Trigger: GATTTCCGACAGAGAAAACCAGGAATCTGTATTTGA...TAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAACACTAATTAGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | CATGTGTCTGAGCCAGTAAGCAGCGAGGATGGTAAAGCCAGGTGTTCGACAGCACTCTTCCTTGCTGGCTaGTCGCTCAGCCTCCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: HVSEPVSSEDGKARCSTALFLAG*SLSLHP Trigger: AGGGTGGAGGCTGAGCGACAAGCCAGCAAGGAAGAG...TGCTGTCGAACACCTGGCTTTACCATCCTCGCTGCTTACTGGCTCAGACACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CCA 90 bp | CCCGGCGACGACAGAAGGGACAGCATAGATTGGCCTTTTCAACAGTaGACTGGAAGCATGGGTTACAGAGCGTGTGGTTGCAAGGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGDDRRDSIDWPFQQ*TGSMGYRACGCKVG Trigger: CCCTACCTTGCAACCACACGCTCTGTAACCCATGCTTCCAGTCCACTGTTGAAAAGGCCAATCTATGCTGTCCCTTCTGTCGTCGCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGACACTCTACTCTCTGTaGGAACTCTGTTGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLELRNLPASASRVLGLKTLYSL*ELCCPQ Trigger: CTGGGGGCAACAGAGTTCCAACAGAGAGTAGAGTGT...CTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | CACCATTTTCCATCTGTGCGCACATACAAGCATGTGTCTGAGCCAGTAAGCAGCCTCTTCCTTGCTGGCTaGTCGCTCAGCCTCCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: HHFPSVRTYKHVSEPVSSLFLAG*SLSLHP Trigger: AGGGTGGAGGCTGAGCGACAAGCCAGCAAGGAAGAG...GCTGCTTACTGGCTCAGACACATGCTTGTATGTGCGCACAGATGGAAAATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | CATGTGTCTGAGCCAGTAAGCAGCGAGGATGGTAAAGCCAGGTGTTCGACAGCATTGTTTTCCTCTTCCTaGCTGGCTTGTCGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HVSEPVSSEDGKARCSTALFSSS*LACRSA Trigger: GGCTGAGCGACAAGCCAGCAAGGAAGAGGAAAACAA...TGCTGTCGAACACCTGGCTTTACCATCCTCGCTGCTTACTGGCTCAGACACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS TCA 90 bp | GGTAGGGTTACAGGCTCTAGGAGGATTTCCATACAGATCCCGCACTaGCATTCGGCTAAGGAAGGGATGGAGGTTTTAGGTGCAGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GRVTGSRRISIQIPH*HSAKEGMEVLGAAI Trigger: GATGGCTGCACCTAAAACCTCCATCCCTTCCTTAGCCGAATGTCAGTGCGGGATCTGTATGGAAATCCTCCTAGAGCCTGTAACCCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171474.2 |
||
| CDS CCA 90 bp | ATAATCTCCCACAGGTCTGTATTGACCAGAGAATTTCTTCGGGTATaGTACCGAGTCCACGAAGAGACCCGGCGACGACAGAAGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: IISHRSVLTREFLRV*YRVHEETRRRQKGQ Trigger: CTGTCCCTTCTGTCGTCGCCGGGTCTCTTCGTGGACTCGGTACCATACCCGAAGAAATTCTCTGGTCAATACAGACCTGTGGGAGATTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGCCGGTTTGGCACCATTaGCTCTTTATCTACCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLELRNLPASASRVLGLKPVWHH*LFIYLF Trigger: AAAGAGGTAGATAAAGAGCAAATGGTGCCAAACCGG...CTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | CACCATTTTCCATCTGTGCGCACATACAAGCATGTGTCTGAGCCAGTAAGCAGCACACTCTACTCTCTGTaGGAACTCTGTTGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HHFPSVRTYKHVSEPVSSTLYSL*ELCCPQ Trigger: CTGGGGGCAACAGAGTTCCAACAGAGAGTAGAGTGT...GCTGCTTACTGGCTCAGACACATGCTTGTATGTGCGCACAGATGGAAAATGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGTTTGGAATTCTTCCTTaGTCTATTCAGCAGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLELRNLPASASRVLGLKFGILP*SIQQPV Trigger: GACAGGCTGCTGAATAGACAAAGGAAGAATTCCAAA...CTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTCAGAAGAGCAGTCTGCGCAGAAGACTCCGAACCTaGTTCTTGAGTTTCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FELATFRRAADLQKSSLRRRLRT*FLSFQA Trigger: TGCCTGGAAACTCAAGAACAAGGTTCGGAGTCTTCT...GCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGAGGGAGTTCCTATCTTaGGAATTCTTCCTTTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GLELRNLPASASRVLGLKREFLS*EFFLCL Trigger: TAGACAAAGGAAGAATTCCAAAGATAGGAACTCCCT...CTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | CATGTGTCTGAGCCAGTAAGCAGCGAGGATGGTAAAGCCAGGTGTTCGACAGCACCCAATAGTCACCTTTaGTGTTCCTCGGAGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HVSEPVSSEDGKARCSTAPNSHL*CSSEIL Trigger: CAAAATCTCCGAGGAACACAAAAGGTGACTATTGGG...TGCTGTCGAACACCTGGCTTTACCATCCTCGCTGCTTACTGGCTCAGACACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTCAGAAGAGCAGTCTGCGCTTCAATTTCTGTGTCTaGCAACACAGGGCTCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: FELATFRRAADLQKSSLRFNFCV*QHRALR Trigger: ACGAAGAGCCCTGTGTTGCAAGACACAGAAATTGAA...GCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTCAGAAGAGCAGTCTGCGCCCCAATAGTCACCTTTaGTGTTCCTCGGAGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FELATFRRAADLQKSSLRPNSHL*CSSEIL Trigger: CAAAATCTCCGAGGAACACAAAAGGTGACTATTGGG...GCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | CATGTGTCTGAGCCAGTAAGCAGCGAGGATGGTAAAGCCAGGTGTTCGACAGCACTTTGCATAGTGTTTTaGAATAATCTCCCACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HVSEPVSSEDGKARCSTALCIVF*NNLPQV Trigger: GACCTGTGGGAGATTATTCAAAAACACTATGCAAAG...TGCTGTCGAACACCTGGCTTTACCATCCTCGCTGCTTACTGGCTCAGACACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGATTACCCATTCAGTTCCAGGGATTCCCTACCTACCAATCCACCACTCTACTCCTCACTGGCTTaGTTTTCCTCTTCCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSDYPFSSRDSLPTNPPLYSSLA*FSSSLL Trigger: CAGCAAGGAAGAGGAAAACAAAGCCAGTGAGGAGTA...GAGTGGTGGATTGGTAGGTAGGGAATCCCTGGAACTGAATGGGTAATCAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGATTACCCATTCAGTTCCAGGGATTCCCTACCTACCAATCCACCACTCAGAAGACTCCGAACCTaGTTCTTGAGTTTCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSDYPFSSRDSLPTNPPLRRLRT*FLSFQA Trigger: TGCCTGGAAACTCAAGAACAAGGTTCGGAGTCTTCT...GAGTGGTGGATTGGTAGGTAGGGAATCCCTGGAACTGAATGGGTAATCAGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGTCCTAAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCACTCGTACTTTGCATAGTGTTTTaGAATAATCTCCCACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EGPKFKSQQPHGGSQPLVLCIVF*NNLPQV Trigger: GACCTGTGGGAGATTATTCAAAAACACTATGCAAAG...TACGAGTGGTTGTGAGCCACCGTGTGGTTGCTGGGATTTGAACTTAGGACCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGATTACCCATTCAGTTCCAGGGATTCCCTACCTACCAATCCACCACTCTCTGTCCTGCTCTTCTaGCTTATGTCTCTCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSDYPFSSRDSLPTNPPLSVLLF*LMSLKK Trigger: CTTTTTGAGAGACATAAGCAAGAAGAGCAGGACAGA...GAGTGGTGGATTGGTAGGTAGGGAATCCCTGGAACTGAATGGGTAATCAGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTAGAGATGGCTCAGCAGGTAAGAGTGCTGCTGAAGGTCCTAAGTTCAAATTCTGTCCTGCTCTTCTaGCTTATGTCTCTCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AVEMAQQVRVLLKVLSSNSVLLF*LMSLKK Trigger: CTTTTTGAGAGACATAAGCAAGAAGAGCAGGACAGA...ATTTGAACTTAGGACCTTCAGCAGCACTCTTACCTGCTGAGCCATCTCTACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | ATCATGTGGTTGCTGGGATTTGAACTTGCGACCTTCAGAAGAGCAGCTGACCTTTTTGGAATTCTTCCTTaGTCTATTCAGCAGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IMWLLGFELATFRRAADLFGILP*SIQQPV Trigger: GACAGGCTGCTGAATAGACAAAGGAAGAATTCCAAA...AAGGTCAGCTGCTCTTCTGAAGGTCGCAAGTTCAAATCCCAGCAACCACATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS TCA 90 bp | GATTCCTGGTTTTCTCTGTCGGAAATCTCTTCTTCAACTAGTAAGTaGTACACTCTACTCTCTGTTGGAACTCTGTTGCCCCCAGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSWFSLSEISSSTSK*YTLLSVGTLLPPVN Trigger: GTTAACTGGGGGCAACAGAGTTCCAACAGAGAGTAGAGTGTATCACTTACTAGTTGAAGAAGAGATTTCCGACAGAGAAAACCAGGAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCACTTAAAGGGATTAAAGAGAATGTTCTGCTACAAGAAGCCTGAAGTCTACTCCTCACTGGCTTaGTTTTCCTCTTCCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FCHLKGLKRMFCYKKPEVYSSLA*FSSSLL Trigger: CAGCAAGGAAGAGGAAAACAAAGCCAGTGAGGAGTA...GACTTCAGGCTTCTTGTAGCAGAACATTCTCTTTAATCCCTTTAAGTGGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCCTTTGTAACCAAACCTCAGAGAGTAAGCAAGCTTGCTGAGCAGAATGTGTTTTTCTTCTGGGACTaGTTTGTGACTGGATCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSFVTKPQRVSKLAEQNVFFFWD*FVTGSD Trigger: ATCAGATCCAGTCACAAACAAGTCCCAGAAGAAAAA...CACATTCTGCTCAGCAAGCTTGCTTACTCTCTGAGGTTTGGTTACAAAGGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCCTTTGTAACCAAACCTCAGAGAGTAAGCAAGCTTGCTGAGCAGAATGTGTTATCTCTGAAACATTaGAACAATGCTTCTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSFVTKPQRVSKLAEQNVLSLKH*NNASLG Trigger: TCCCAGAGAAGCATTGTTCAAATGTTTCAGAGATAA...CACATTCTGCTCAGCAAGCTTGCTTACTCTCTGAGGTTTGGTTACAAAGGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCACTTAAAGGGATTAAAGAGAATGTTCTGCTACAAGAAGCCTGAAGTCTTTTTCTTCTGGGACTaGTTTGTGACTGGATCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FCHLKGLKRMFCYKKPEVFFFWD*FVTGSD Trigger: ATCAGATCCAGTCACAAACAAGTCCCAGAAGAAAAA...GACTTCAGGCTTCTTGTAGCAGAACATTCTCTTTAATCCCTTTAAGTGGCAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTTTATACCTGTAAAGATGCCACACTTAGAACACTGCAGTTATTGACAATGCCGGTTTGGCACCATTaGCTCTTTATCTACCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CFYTCKDATLRTLQLLTMPVWHH*LFIYLF Trigger: AAAGAGGTAGATAAAGAGCAAATGGTGCCAAACCGG...CATTGTCAATAACTGCAGTGTTCTAAGTGTGGCATCTTTACAGGTATAAAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | GAACTAATTAGTGTTATGGAAGATACCTGTGTGGACTCCTTACCCATTCATTTAAGGGAGTTCCTATCTTaGGAATTCTTCCTTTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: ELISVMEDTCVDSLPIHLREFLS*EFFLCL Trigger: TAGACAAAGGAAGAATTCCAAAGATAGGAACTCCCT...TAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAACACTAATTAGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS TCA 90 bp | TTGTTTACTTGTATTTTTCTTCTGGGACTTGTTTGTGACTGGATCTaGTTTTCTGGAACTCAAAGGAGAAGCCAAGGTATTTCTCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: LFTCIFLLGLVCDWI*FSGTQRRSQGISLI Trigger: TATGAGAGAAATACCTTGGCTTCTCCTTTGAGTTCCAGAAAATCAGATCCAGTCACAAACAAGTCCCAGAAGAAAAATACAAGTAAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS-3UTR CAA 90 bp | GAACTAATTAGTGTTATGGAAGATACCTGTGTGGACTCCTTACCCATTCATTTATTATCTCTGAAACATTaGAACAATGCTTCTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ELISVMEDTCVDSLPIHLLSLKH*NNASLG Trigger: TCCCAGAGAAGCATTGTTCAAATGTTTCAGAGATAA...TAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAACACTAATTAGTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS TCA 72 bp | AGCCTGTCTGGGGGTGAGGGTGTGCGTAGCTGGTACTaGTCTGGGGATCCTTTCTGCCGGTTTGGCACCATT | + |
|
Preference number: 6 (lower is better) Translates to: SLSGGEGVRSWY*SGDPFCRFGTI Trigger: AATGGTGCCAAACCGGCAGAAAGGATCCCCAGATCAGTACCAGCTACGCACACCCTCACCCCCAGACAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CAA 72 bp | CTGTGGCCCGGGTATCCCTGCAGAAGACTCCGAACCTaGTTCTTGAGTTTCCAGGCAGGTCTGAGGAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LWPGYPCRRLRT*FLSFQAGLRRK Trigger: CTTTCTCCTCAGACCTGCCTGGAAACTCAAGAACAAGGTTCGGAGTCTTCTGCAGGGATACCCGGGCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CAA 90 bp | TCCTCCTCCTCAGCCAACAATCTCTGGATGTACTCCTCACTGGCTTaGTTTTCCTCTTCCTTGCTGGCTTGTCGCTCAGCCTCCACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSANNLWMYSSLA*FSSSLLACRSASTL Trigger: CAGGGTGGAGGCTGAGCGACAAGCCAGCAAGGAAGAGGAAAACAAAGCCAGTGAGGAGTACATCCAGAGATTGTTGGCTGAGGAGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CCA 72 bp | CACAGGTCTGTATTGACCAGAGAATTTCTTCGGGTATaGTACCGAGTCCACGAAGAGACCCGGCGACGACAG | + |
|
Preference number: 6 (lower is better) Translates to: HRSVLTREFLRV*YRVHEETRRRQ Trigger: CTGTCGTCGCCGGGTCTCTTCGTGGACTCGGTACCATACCCGAAGAAATTCTCTGGTCAATACAGACCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CAA 72 bp | ACAGTGGACTGGAAGCATGGGTTACAGAGCGTGTGGTaGCAAGGTAGGGTTACAGGCTCTAGGAGGATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVDWKHGLQSVW*QGRVTGSRRIS Trigger: GGAAATCCTCCTAGAGCCTGTAACCCTACCTTGCAACCACACGCTCTGTAACCCATGCTTCCAGTCCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CCA 72 bp | GACAGAAGGGACAGCATAGATTGGCCTTTTCAACAGTaGACTGGAAGCATGGGTTACAGAGCGTGTGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: DRRDSIDWPFQQ*TGSMGYRACGC Trigger: GCAACCACACGCTCTGTAACCCATGCTTCCAGTCCACTGTTGAAAAGGCCAATCTATGCTGTCCCTTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS TCA 72 bp | ACAGGCTCTAGGAGGATTTCCATACAGATCCCGCACTaGCATTCGGCTAAGGAAGGGATGGAGGTTTTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGSRRISIQIPH*HSAKEGMEVLG Trigger: ACCTAAAACCTCCATCCCTTCCTTAGCCGAATGTCAGTGCGGGATCTGTATGGAAATCCTCCTAGAGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CAA 90 bp | CGGAAATCTCTTCTTCAACTAGTAAGTGATACACTCTACTCTCTGTaGGAACTCTGTTGCCCCCAGTTAACTGGGGCACACCTGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RKSLLQLVSDTLYSL*ELCCPQLTGAHLSQ Trigger: CTGTGACAGGTGTGCCCCAGTTAACTGGGGGCAACAGAGTTCCAACAGAGAGTAGAGTGTATCACTTACTAGTTGAAGAAGAGATTTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CCA 72 bp | CTACTCTCTGTTGGAACTCTGTTGCCCCCAGTTAACTaGGGCACACCTGTCACAGAGTATTCTTCATTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLSVGTLLPPVN*GTPVTEYSSFS Trigger: AGAAAATGAAGAATACTCTGTGACAGGTGTGCCCCAGTTAACTGGGGGCAACAGAGTTCCAACAGAGAGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CAA 72 bp | CTTCTTCAACTAGTAAGTGATACACTCTACTCTCTGTaGGAACTCTGTTGCCCCCAGTTAACTGGGGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: LLQLVSDTLYSL*ELCCPQLTGAH Trigger: GTGTGCCCCAGTTAACTGGGGGCAACAGAGTTCCAACAGAGAGTAGAGTGTATCACTTACTAGTTGAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CAA 90 bp | TTCTTGTCCAGAGATTCTAAGCTTGCATTCCTTTGCATAGTGTTTTaGAATAATCTCCCACAGGTCTGTATTGACCAGAGAATTTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: FLSRDSKLAFLCIVF*NNLPQVCIDQRISS Trigger: CGAAGAAATTCTCTGGTCAATACAGACCTGTGGGAGATTATTCAAAAACACTATGCAAAGGAATGCAAGCTTAGAATCTCTGGACAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CCA 72 bp | GTCCATCATCATTTACAATACATAAATCATCAGGACTaGTTGATACTGTTTCAACTTTTCCCTCAAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: VHHHLQYINHQD*LILFQLFPQGT Trigger: AGTCCCTTGAGGGAAAAGTTGAAACAGTATCAACCAGTCCTGATGATTTATGTATTGTAAATGATGATGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||
| CDS CAA 72 bp | CATCATCATTTACAATACATAAATCATCAGGACTGGTaGATACTGTTTCAACTTTTCCCTCAAGGGACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HHHLQYINHQDW*ILFQLFPQGTL Trigger: AAGAGTCCCTTGAGGGAAAAGTTGAAACAGTATCAACCAGTCCTGATGATTTATGTATTGTAAATGATGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014218.15 ENSMUST00000171474.2 |
||