Pregenerated sensors for RNF167 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040746Ensembl transcript IDs: ENSMUST00000037534.8, ENSMUST00000141695.8, ENSMUST00000152160.8
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGGTGGGAAGAGTAGGGCTAGAGCCCAGGAGTGGGGTCCATTCTaGAGCAGGTTGGTCCCTTGGCTCCCCTTCATCGCCTTCCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: GGGKSRARAQEWGPF*SRLVPWLPFIAFLL Trigger: CAAGAGGAAGGCGATGAAGGGGAGCCAAGGGACCAACCTGCTTCAGAATGGACCCCACTCCTGGGCTCTAGCCCTACTCTTCCCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR CCA 90 bp | GCTGTTGGATTTCCTCGCTGTTCCACACCATGTTCAGCAGTTCATTaGAATTCACATTGTGCACCACAGCTGCACCATACCCAGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: AVGFPRCSTPCSAVH*NSHCAPQLHHTQPS Trigger: AGAAGGCTGGGTATGGTGCAGCTGTGGTGCACAATGTGAATTCCAATGAACTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141695.8 ENSMUST00000152160.8 |
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| 3UTR TCA 90 bp | TGGGTAGGAATCTGTTTCAGTTGCTCTTTGGTAAGTCGGTTCCGCTaGAGCCGTTTCCGGTGCTGGATGCAACGAACTATCAATACTGTT | + |
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Preference number: 1 (lower is better) Translates to: WVGICFSCSLVSRFR*SRFRCWMQRTINTV Trigger: AACAGTATTGATAGTTCGTTGCATCCAGCACCGGAAACGGCTTCAGCGGAACCGACTTACCAAAGAGCAACTGAAACAGATTCCTACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCATTCTGAAGCAGGTTGGTCCCTTGGCTCCCCTTCATCGCCTTCCTCTTGCCAGGCATTTTCTGGGTaGGCCTCCACAAGGAACCCC | + |
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Preference number: 2 (lower is better) Translates to: VHSEAGWSLGSPSSPSSCQAFSG*ASTRNP Trigger: GGGGTTCCTTGTGGAGGCCCACCCAGAAAATGCCTG...GCAAGAGGAAGGCGATGAAGGGGAGCCAAGGGACCAACCTGCTTCAGAATGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCTTCCTGCTCCTCATCGCCAGGACCCCGATGTACAGGCTGTTTGCAGATGCCCCCTCAAAAGGATaGGGCTGGGTTCATGAACCT | + |
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Preference number: 2 (lower is better) Translates to: FFFLLLIARTPMYRLFADAPSKG*GWVHEP Trigger: AGGTTCATGAACCCAGCCTCATCCTTTTGAGGGGGC...ATCTGCAAACAGCCTGTACATCGGGGTCCTGGCGATGAGGAGCAGGAAGAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR CAA 90 bp | AAGTTGCAGTCGAATCTTCGAAGCAGTGCAATAAAGACTGACCCATaGACCGGGGCTGAGGGTGGTGGGGCAATAGGACCGCAGGCATTT | + |
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Preference number: 2 (lower is better) Translates to: KLQSNLRSSAIKTDP*TGAEGGGAIGPQAF Trigger: AAATGCCTGCGGTCCTATTGCCCCACCACCCTCAGCCCCGGTCAATGGGTCAGTCTTTATTGCACTGCTTCGAAGATTCGACTGCAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGTTTGTGCGTAAGTCGGTTCCGCTaGAGCCGTTTCCGGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: ECPLSLTLSLLDWKKSLCVSRFR*SRFRCW Trigger: CCAGCACCGGAAACGGCTTCAGCGGAACCGACTTAC...GCACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCATTCTGAAGCAGGTTGGTCCCTTGGCTCCCCTTCATCGCCTTCCTCTTGCTTGGAATTCACATTGTaGACCACAGCTGCACCATAC | + |
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Preference number: 2 (lower is better) Translates to: VHSEAGWSLGSPSSPSSCLEFTL*TTAAPY Trigger: GTATGGTGCAGCTGTGGTGCACAATGTGAATTCCAA...GCAAGAGGAAGGCGATGAAGGGGAGCCAAGGGACCAACCTGCTTCAGAATGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGTTTCTTCTTCCTGCTCCTCATCGCCAGGACCCCGATGTACAGGCTGTTATCCAGATCTGCTGTTaGATTTCCTCGCTGTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LEFLLPAPHRQDPDVQAVIQICC*ISSLFH Trigger: GTGGAACAGCGAGGAAATCCAACAGCAGATCTGGAT...AACAGCCTGTACATCGGGGTCCTGGCGATGAGGAGCAGGAAGAAGAAACTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR CAA 90 bp | TGCTGTTGGATTTCCTCGCTGTTCCACACCATGTTCAGCAGTTCATaGGAATTCACATTGTGCACCACAGCTGCACCATACCCAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: CCWISSLFHTMFSSS*EFTLCTTAAPYPAF Trigger: GAAGGCTGGGTATGGTGCAGCTGTGGTGCACAATGTGAATTCCAATGAACTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141695.8 ENSMUST00000152160.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGTTTGTGCGCCCCCTCAAAAGGATaGGGCTGGGTTCATGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: ECPLSLTLSLLDWKKSLCAPSKG*GWVHEP Trigger: AGGTTCATGAACCCAGCCTCATCCTTTTGAGGGGGC...GCACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
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| 3UTR-3UTR CCA 90 bp | GATTTCCTCGCTGTTCCACACCATGTTCAGCAGTTCATTGGAATTCACATTGTGACCGCAGGCATTTTCTaGGTGGGCCTCCACAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: DFLAVPHHVQQFIGIHIVTAGIF*VGLHKE Trigger: TTCCTTGTGGAGGCCCACCCAGAAAATGCCTGCGGT...CACAATGTGAATTCCAATGAACTGCTGAACATGGTGTGGAACAGCGAGGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141695.8 ENSMUST00000152160.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTCCACACAGCGACTGTGATAAGCATGAGCACAGGGAAGTACTCGAAGCTTGTTCAGCAGTTCATTaGAATTCACATTGTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: RGPHSDCDKHEHREVLEACSAVH*NSHCAP Trigger: TGGTGCACAATGTGAATTCCAATGAACTGCTGAACA...AGCTTCGAGTACTTCCCTGTGCTCATGCTTATCACAGTCGCTGTGTGGACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTCCACACAGCGACTGTGATAAGCATGAGCACAGGGAAGTACTCGAAGCTTCCAATAAATACAGATaGGATCCAGATCTGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: RGPHSDCDKHEHREVLEASNKYR*DPDLLL Trigger: CAACAGCAGATCTGGATCCCATCTGTATTTATTGGA...AGCTTCGAGTACTTCCCTGTGCTCATGCTTATCACAGTCGCTGTGTGGACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR CAA 90 bp | ATATTCATCTCCTTTCTGATAGTCATGGGTAGGAATCTGTTTCAGTaGCTCTTTGGTAAGTCGGTTCCGCTGAAGCCGTTTCCGGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: IFISFLIVMGRNLFQ*LFGKSVPLKPFPVL Trigger: CAGCACCGGAAACGGCTTCAGCGGAACCGACTTACCAAAGAGCAACTGAAACAGATTCCTACCCATGACTATCAGAAAGGAGATGAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGATTTCCTCGCTGTTCCACACCATGTTCAGCAGTTCATTGGAATTCACATTATGAGGCTGGGTTCATaGACCTGGGGTAGAATGTCC | + |
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Preference number: 2 (lower is better) Translates to: LDFLAVPHHVQQFIGIHIMRLGS*TWGRMS Trigger: GGACATTCTACCCCAGGTTCATGAACCCAGCCTCAT...AATGTGAATTCCAATGAACTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR-3UTR CCA 90 bp | GAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGTTTGTGCAAAACCATGTCCCTATaGCTTCTAGCCCCCTCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: ECPLSLTLSLLDWKKSLCKTMSL*LLAPSK Trigger: TTTTGAGGGGGCTAGAAGCCATAGGGACATGGTTTT...GCACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGATTTCCTCGCTGTTCCACACCATGTTCAGCAGTTCATTGGAATTCACATTGAGCATTTAGGACCTTaGGGTCAAAGTTGCAGTCGA | + |
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Preference number: 2 (lower is better) Translates to: LDFLAVPHHVQQFIGIHIEHLGP*GQSCSR Trigger: TCGACTGCAACTTTGACCTCAAGGTCCTAAATGCTC...AATGTGAATTCCAATGAACTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
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| 3UTR-3UTR CCA 90 bp | GAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGTTTGTGCCTCAGCTTATTAGACTaGAAAAAGAGTTTGTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: ECPLSLTLSLLDWKKSLCLSLLD*KKSLCK Trigger: TTTGCACAAACTCTTTTTCCAGTCTAATAAGCTGAG...GCACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGATTTCCTCGCTGTTCCACACCATGTTCAGCAGTTCATTGGAATTCACACTCAGCTTATTAGACTaGAAAAAGAGTTTGTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: CWISSLFHTMFSSSLEFTLSLLD*KKSLCK Trigger: TTTGCACAAACTCTTTTTCCAGTCTAATAAGCTGAG...TGTGAATTCCAATGAACTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR CCA 72 bp | CTAGAGCCCAGGAGTGGGGTCCATTCTGAAGCAGGTTaGTCCCTTGGCTCCCCTTCATCGCCTTCCTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LEPRSGVHSEAG*SLGSPSSPSSC Trigger: GCAAGAGGAAGGCGATGAAGGGGAGCCAAGGGACCAACCTGCTTCAGAATGGACCCCACTCCTGGGCTCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCTGCTCCTCATCGCCAGGACCCCGATGTACAGGCTGTTTGCAGATGGGGCAGATCCAGATCTGCTGTaGGATTTCCTCGCTGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: FLLLIARTPMYRLFADGADPDLL*DFLAVP Trigger: TGGAACAGCGAGGAAATCCAACAGCAGATCTGGATC...TGCCCCATCTGCAAACAGCCTGTACATCGGGGTCCTGGCGATGAGGAGCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCTTCCTGCTCCTCATCGCCAGGACCCCGATGTACAGGCTGTTTGCAGATCCCAAGGGGAAGCTGTaGTCTGGAACCAGAAGCACC | + |
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Preference number: 3 (lower is better) Translates to: FFFLLLIARTPMYRLFADPKGKL*SGTRST Trigger: GGTGCTTCTGGTTCCAGACAACAGCTTCCCCTTGGG...ATCTGCAAACAGCCTGTACATCGGGGTCCTGGCGATGAGGAGCAGGAAGAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR TCA 72 bp | ATCTGTTTCAGTTGCTCTTTGGTAAGTCGGTTCCGCTaGAGCCGTTTCCGGTGCTGGATGCAACGAACTATC | + |
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Preference number: 3 (lower is better) Translates to: ICFSCSLVSRFR*SRFRCWMQRTI Trigger: GATAGTTCGTTGCATCCAGCACCGGAAACGGCTTCAGCGGAACCGACTTACCAAAGAGCAACTGAAACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| 3UTR CCA 72 bp | TTTCCTCGCTGTTCCACACCATGTTCAGCAGTTCATTaGAATTCACATTGTGCACCACAGCTGCACCATACC | + |
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Preference number: 3 (lower is better) Translates to: FPRCSTPCSAVH*NSHCAPQLHHT Trigger: GGTATGGTGCAGCTGTGGTGCACAATGTGAATTCCAATGAACTGCTGAACATGGTGTGGAACAGCGAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141695.8 ENSMUST00000152160.8 |
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| 3UTR GCA 72 bp | CTTCTCTCTCCAATAAATACAGATGGGATCCAGATCTaGTGTTGGATTTCCTCGCTGTTCCACACCATGTTC | + |
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Preference number: 3 (lower is better) Translates to: LLSPINTDGIQI*CWISSLFHTMF Trigger: GAACATGGTGTGGAACAGCGAGGAAATCCAACAGCAGATCTGGATCCCATCTGTATTTATTGGAGAGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141695.8 ENSMUST00000152160.8 |
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| 3UTR CCA 72 bp | TCTCCAATAAATACAGATGGGATCCAGATCTGCTGTTaGATTTCCTCGCTGTTCCACACCATGTTCAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: SPINTDGIQICC*ISSLFHTMFSS Trigger: ACTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAACAGCAGATCTGGATCCCATCTGTATTTATTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141695.8 ENSMUST00000152160.8 |
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| 3UTR CAA 72 bp | CCAGGAGTGGGGTCCATTCTGAAGCAGGTTGGTCCCTaGGCTCCCCTTCATCGCCTTCCTCTTGCTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: PGVGSILKQVGP*APLHRLPLALE Trigger: CTCAAGAGCAAGAGGAAGGCGATGAAGGGGAGCCAAGGGACCAACCTGCTTCAGAATGGACCCCACTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| CDS-3UTR TCA 90 bp | CATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGTCTTGCGGGTCTGAGTaGGCCAGGGGTCCACACAGC | + |
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Preference number: 4 (lower is better) Translates to: HEPGVECPLSLTLSLLDWSCGSE*ARGPHS Trigger: GCTGTGTGGACCCCTGGCTCACTCAGACCCGCAAGA...CCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
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| CDS-3UTR GCA 90 bp | CATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGCCCTCGGACAGGGGCTaGTCCCCACAGTACAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: HEPGVECPLSLTLSLLDWPSDRG*SPQYSS Trigger: GCTACTGTACTGTGGGGAGCAGCCCCTGTCCGAGGG...CCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
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| CDS-3UTR CCA 90 bp | CATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGGAGGTGAGGGATCTGTaGAGGGCCCAGGGAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: HEPGVECPLSLTLSLLDWEVRDL*RAQGRP Trigger: TGGTCTTCCCTGGGCCCTCCACAGATCCCTCACCTC...CCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
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| 3UTR CAA 72 bp | TCGAATCTTCGAAGCAGTGCAATAAAGACTGACCCATaGACCGGGGCTGAGGGTGGTGGGGCAATAGGACCG | + |
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Preference number: 4 (lower is better) Translates to: SNLRSSAIKTDP*TGAEGGGAIGP Trigger: CGGTCCTATTGCCCCACCACCCTCAGCCCCGGTCAATGGGTCAGTCTTTATTGCACTGCTTCGAAGATTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
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| CDS-3UTR TCA 90 bp | ACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAACAGGTCTTGCGGGTCTaGGTGAGCCAGGGGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: TWGRMSPIPHPQLIRLEKQVLRV*VSQGST Trigger: TGTGGACCCCTGGCTCACTCAGACCCGCAAGACCTG...TTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
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| CDS-3UTR CCA 90 bp | CATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGCCTCGTCGCTCAGAGTaGCCCCAAACAGAGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: HEPGVECPLSLTLSLLDWPRRSE*PQTELE Trigger: TTCCAGCTCTGTTTGGGGCCACTCTGAGCGACGAGG...CCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
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| CDS-3UTR TCA 90 bp | ACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGTAAGTCGGTTCCGCTaGAGCCGTTTCCGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TWGRMSPIPHPQLIRLEKVSRFR*SRFRCW Trigger: CCAGCACCGGAAACGGCTTCAGCGGAACCGACTTAC...TTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
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| CDS-3UTR TCA 90 bp | TGGGTTCATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGAGTGGGGTCCATTCTaGAGCAGGTTGGTCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: WVHEPGVECPLSLTLSLLEWGPF*SRLVPW Trigger: CCAAGGGACCAACCTGCTTCAGAATGGACCCCACTC...TAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATGAACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
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| CDS-3UTR GCA 90 bp | CTGTTGGATTTCCTCGCTGTTCCACACCATGTTCAGCAGTTCATTGGAATTCACCCCTCGGACAGGGGCTaGTCCCCACAGTACAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LLDFLAVPHHVQQFIGIHPSDRG*SPQYSS Trigger: GCTACTGTACTGTGGGGAGCAGCCCCTGTCCGAGGG...GTGAATTCCAATGAACTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000141695.8 ENSMUST00000152160.8 |
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| CDS-3UTR GCA 90 bp | TCGCTGTTCCACACCATGTTCAGCAGTTCATTGGAATTCACATTGTGCACCACACCCTCGGACAGGGGCTaGTCCCCACAGTACAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SLFHTMFSSSLEFTLCTTPSDRG*SPQYSS Trigger: GCTACTGTACTGTGGGGAGCAGCCCCTGTCCGAGGG...TGTGGTGCACAATGTGAATTCCAATGAACTGCTGAACATGGTGTGGAACAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141695.8 ENSMUST00000152160.8 |
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| CDS-3UTR CCA 90 bp | GAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAGGGGAAGCTGTTGTCTaGAACCAGAAGCACCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: EPGVECPLSLTLSLLDWKGEAVV*NQKHPS Trigger: GCTCGGGTGCTTCTGGTTCCAGACAACAGCTTCCCC...TTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
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| CDS-3UTR CCA 90 bp | GAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAACAGGCTGTTTGCAGATaGGGCAGGTCTTGCGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: EPGVECPLSLTLSLLDWKQAVCR*GRSCGS Trigger: AGACCCGCAAGACCTGCCCCATCTGCAAACAGCCTG...TTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
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| CDS-3UTR GCA 90 bp | CATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGATTGTGCACCACAGCTaGACCATACCCAGCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: HEPGVECPLSLTLSLLDWIVHHS*TIPSLL Trigger: CAGAAGGCTGGGTATGGTGCAGCTGTGGTGCACAAT...CCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
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| CDS-3UTR CCA 90 bp | GGGATCCAGATCTGCTGTTGGATTTCCTCGCTGTTCCACACCATGTTCAGCAGTCTGCAAAGTCCATGCTaGCATTGTGCTCCGAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: GIQICCWISSLFHTMFSSLQSPC*HCAPKS Trigger: CGACTTCGGAGCACAATGCCAGCATGGACTTTGCAG...ACTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAACAGCAGATCTGGATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
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| CDS-3UTR CCA 90 bp | CATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGCATTCTGAAGCAGGTTaGTCCCTTGGCTCCCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: HEPGVECPLSLTLSLLDWHSEAG*SLGSPS Trigger: TGAAGGGGAGCCAAGGGACCAACCTGCTTCAGAATG...CCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
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| CDS-3UTR GCA 90 bp | CATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGGATGGGATCCAGATCTaGTGTTGGATTTCCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: HEPGVECPLSLTLSLLDWDGIQI*CWISSL Trigger: CAGCGAGGAAATCCAACAGCAGATCTGGATCCCATC...CCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
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| CDS-3UTR CCA 90 bp | TGGGTTCATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTACTGCAAAGTCCATGCTaGCATTGTGCTCCGAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: WVHEPGVECPLSLTLSLLLQSPC*HCAPKS Trigger: CGACTTCGGAGCACAATGCCAGCATGGACTTTGCAG...TAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATGAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
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| CDS-3UTR CCA 90 bp | GAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGTTTGTGCCCTCGTCGCTCAGAGTaGCCCCAAACAGAGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: ECPLSLTLSLLDWKKSLCPRRSE*PQTELE Trigger: TTCCAGCTCTGTTTGGGGCCACTCTGAGCGACGAGG...GCACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
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| CDS-3UTR CCA 90 bp | GAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGTTTGTGCCAGGCATTTTCTGGGTaGGCCTCCACAAGGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: ECPLSLTLSLLDWKKSLCQAFSG*ASTRNP Trigger: GGGGTTCCTTGTGGAGGCCCACCCAGAAAATGCCTG...GCACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGTTTGTGCAGCAGGTTGGTCCCTTaGCTCCCCTTCATCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ECPLSLTLSLLDWKKSLCSRLVP*LPFIAF Trigger: GAAGGCGATGAAGGGGAGCCAAGGGACCAACCTGCT...GCACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAACCATACCCAGCCTTCTaGGCATTTAGGACCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TWGRMSPIPHPQLIRLEKPYPAF*AFRTLR Trigger: CCTCAAGGTCCTAAATGCTCAGAAGGCTGGGTATGG...TTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR GCA 90 bp | CCAGATCTGCTGTTGGATTTCCTCGCTGTTCCACACCATGTTCAGCAGTTCATTTCCATGCTGGCATTGTaGTCCGAAGTCGCTCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: PDLLLDFLAVPHHVQQFISMLAL*SEVARI Trigger: GATTCGAGCGACTTCGGAGCACAATGCCAGCATGGA...AATGAACTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAACAGCAGATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGATGTACAGGCTGTTTaGAGATGGGGCAGGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TWGRMSPIPHPQLIRLEKDVQAV*RWGRSC Trigger: GCAAGACCTGCCCCATCTGCAAACAGCCTGTACATC...TTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR GCA 90 bp | CCAATAAATACAGATGGGATCCAGATCTGCTGTTGGATTTCCTCGCTGTTCCACTCCATGCTGGCATTGTaGTCCGAAGTCTGCAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: PINTDGIQICCWISSLFHSMLAL*SEVCRR Trigger: CCGTCTGCAGACTTCGGAGCACAATGCCAGCATGGA...GTGGAACAGCGAGGAAATCCAACAGCAGATCTGGATCCCATCTGTATTTATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGTTTGTGCACCGCAGGCATTTTCTaGGTGGGCCTCCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ECPLSLTLSLLDWKKSLCTAGIF*VGLHKE Trigger: TTCCTTGTGGAGGCCCACCCAGAAAATGCCTGCGGT...GCACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR GCA 90 bp | CATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGTTGGAATTCACATTGTaGACCACAGCTGCACCATAC | + |
|
Preference number: 4 (lower is better) Translates to: HEPGVECPLSLTLSLLDWLEFTL*TTAAPY Trigger: GTATGGTGCAGCTGTGGTGCACAATGTGAATTCCAA...CCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR GCA 90 bp | CATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGGTTTCCGGTGCTGGATaGAACGAACTATCAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: HEPGVECPLSLTLSLLDWVSGAG*NELSIL Trigger: CAGTATTGATAGTTCGTTGCATCCAGCACCGGAAAC...CCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGCATTTAGGACCTTaGGGTCAAAGTTGCAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TWGRMSPIPHPQLIRLEKEHLGP*GQSCSR Trigger: TCGACTGCAACTTTGACCTCAAGGTCCTAAATGCTC...TTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR GCA 90 bp | AGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGTTTGTGTCCATGCTGGCATTGTaGTCCGAAGTCGCTCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: RMSPIPHPQLIRLEKEFVSMLAL*SEVARI Trigger: GATTCGAGCGACTTCGGAGCACAATGCCAGCATGGA...CACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAATCCAGATCTGCTGTTaGATTTCCTCGCTGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TWGRMSPIPHPQLIRLEKIQICC*ISSLFH Trigger: GTGGAACAGCGAGGAAATCCAACAGCAGATCTGGAT...TTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAAGCCGTTTCCGGTGCTaGATGCAACGAACTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TWGRMSPIPHPQLIRLEKSRFRC*MQRTIN Trigger: ATTGATAGTTCGTTGCATCCAGCACCGGAAACGGCT...TTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGATTTCCTCGCTGTTCCACACCATGTTCAGCAGTTCATTGGAATTCACCTGCAAAGTCCATGCTaGCATTGTGCTCCGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLDFLAVPHHVQQFIGIHLQSPC*HCAPKS Trigger: AGACTTCGGAGCACAATGCCAGCATGGACTTTGCAG...GTGAATTCCAATGAACTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
||
| CDS-3UTR CCA 90 bp | CATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGTCAATACTGTTCCCATaGCCAAAACCAGTAATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: HEPGVECPLSLTLSLLDWSILFP*PKPVIL Trigger: TAGGATTACTGGTTTTGGCCATGGGAACAGTATTGA...CCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| 3UTR CAA 72 bp | ATTTCCTCGCTGTTCCACACCATGTTCAGCAGTTCATaGGAATTCACATTGTGCACCACAGCTGCACCATAC | + |
|
Preference number: 4 (lower is better) Translates to: ISSLFHTMFSSS*EFTLCTTAAPY Trigger: GTATGGTGCAGCTGTGGTGCACAATGTGAATTCCAATGAACTGCTGAACATGGTGTGGAACAGCGAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141695.8 ENSMUST00000152160.8 |
||
| 3UTR CAA 72 bp | CTCTCCAATAAATACAGATGGGATCCAGATCTGCTGTaGGATTTCCTCGCTGTTCCACACCATGTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSNKYRWDPDLL*DFLAVPHHVQQ Trigger: CTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAACAGCAGATCTGGATCCCATCTGTATTTATTGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141695.8 ENSMUST00000152160.8 |
||
| CDS-3UTR CCA 90 bp | GAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAATGTTCAGCAGTTCATTaGAATTCACATTGTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EPGVECPLSLTLSLLDWKCSAVH*NSHCAP Trigger: TGGTGCACAATGTGAATTCCAATGAACTGCTGAACA...TTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| 3UTR CAA 72 bp | TCCTTTCTGATAGTCATGGGTAGGAATCTGTTTCAGTaGCTCTTTGGTAAGTCGGTTCCGCTGAAGCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLIVMGRNLFQ*LFGKSVPLKPF Trigger: AAACGGCTTCAGCGGAACCGACTTACCAAAGAGCAACTGAAACAGATTCCTACCCATGACTATCAGAAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAATCCAATAAATACAGATaGGATCCAGATCTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TWGRMSPIPHPQLIRLEKSNKYR*DPDLLL Trigger: CAACAGCAGATCTGGATCCCATCTGTATTTATTGGA...TTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| 3UTR CAA 72 bp | TTTTATCTTAGCCCACTCTCAGACTCCCTCTTAAACTaGGGAGTTCTAGGGGTTGTAGATGGTTCAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FYLSPLSDSLLN*GVLGVVDGSVL Trigger: AAGCACTGAACCATCTACAACCCCTAGAACTCCCAAGTTTAAGAGGGAGTCTGAGAGTGGGCTAAGATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
||
| CDS GCA 90 bp | GGCATTGTGCTCCGAAGTCGCTCGAATCAGCCCTCGGACAGGGGCTaGTCCCCACAGTACAGTAGCCACGACAACAGGAAGCGGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GIVLRSRSNQPSDRG*SPQYSSHDNRKREG Trigger: GCCTTCCCGCTTCCTGTTGTCGTGGCTACTGTACTGTGGGGAGCAGCCCCTGTCCGAGGGCTGATTCGAGCGACTTCGGAGCACAATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
||
| CDS GCA 90 bp | GCCCCAAACAGAGCTGGAAGGTCTGCAAAGTCCATGCTGGCATTGTaGTCCGAAGTCGCTCGAATCAGCCCTCGGACAGGGGCTGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: APNRAGRSAKSMLAL*SEVARISPRTGAAP Trigger: GGGAGCAGCCCCTGTCCGAGGGCTGATTCGAGCGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTTTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
||
| CDS GCA 90 bp | AAGTCTGCAGACGGAACACGCTCGAATCAGCCCTCGGACAGGGGCTaGTCCCCACAGTACAGTAGCCACGACAACAGGAAGCGGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSADGTRSNQPSDRG*SPQYSSHDNRKREG Trigger: GCCTTCCCGCTTCCTGTTGTCGTGGCTACTGTACTGTGGGGAGCAGCCCCTGTCCGAGGGCTGATTCGAGCGTGTTCCGTCTGCAGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
||
| CDS GCA 90 bp | GCTGGAAGGTCTGCAAAGTCCATGCTGGCATTGTGCTCCGAAGTCTaGAGACGGAACACGCTCGAATCAGCCCTCGGACAGGGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGRSAKSMLALCSEV*RRNTLESALGQGLL Trigger: GAGCAGCCCCTGTCCGAGGGCTGATTCGAGCGTGTTCCGTCTGCAGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
||
| CDS GCA 90 bp | CGCTCAGAGTGGCCCCAAACAGAGCTGGAAGGTCTGCAAAGTCCATaGTGGCATTGTGCTCCGAAGTCGCTCGAATCAGCCCTCGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: RSEWPQTELEGLQSP*WHCAPKSLESALGQ Trigger: CTGTCCGAGGGCTGATTCGAGCGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTTTGGGGCCACTCTGAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
||
| CDS CCA 90 bp | TCAGAGTGGCCCCAAACAGAGCTGGAAGGTCTGCAAAGTCCATGCTaGCATTGTGCTCCGAAGTCGCTCGAATCAGCCCTCGGACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SEWPQTELEGLQSPC*HCAPKSLESALGQG Trigger: CCCCTGTCCGAGGGCTGATTCGAGCGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTTTGGGGCCACTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
||
| CDS GCA 90 bp | GCCCCAAACAGAGCTGGAAGGTCTGCAAAGTCCATGCTGGCATTGTaGTCCGAAGTCTGCAGACGGAACACGCTCGAATCAGCCCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: APNRAGRSAKSMLAL*SEVCRRNTLESALG Trigger: TCCGAGGGCTGATTCGAGCGTGTTCCGTCTGCAGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTTTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
||
| CDS CCA 90 bp | TCAGAGTGGCCCCAAACAGAGCTGGAAGGTCTGCAAAGTCCATGCTaGCATTGTGCTCCGAAGTCTGCAGACGGAACACGCTCGAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SEWPQTELEGLQSPC*HCAPKSADGTRSNQ Trigger: CTGATTCGAGCGTGTTCCGTCTGCAGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTTTGGGGCCACTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
||
| CDS-3UTR CAA 90 bp | CTTGAGTTTCTTCTTCCTGCTCCTCATCGCCAGGACCCCGATGTACAGGCTGTTAAGTCCATGCTGGCATaGTGCTCCGAAGTCGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LEFLLPAPHRQDPDVQAVKSMLA*CSEVAR Trigger: TCGAGCGACTTCGGAGCACAATGCCAGCATGGACTT...AACAGCCTGTACATCGGGGTCCTGGCGATGAGGAGCAGGAAGAAGAAACTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141695.8 |
||
| CDS-3UTR CAA 90 bp | CATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAGTCCATGCTGGCATaGTGCTCCGAAGTCGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: HEPGVECPLSLTLSLLDWKSMLA*CSEVAR Trigger: TCGAGCGACTTCGGAGCACAATGCCAGCATGGACTT...CCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTACCCAAGGGGAAGCTGTaGTCTGGAACCAGAAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: WVHEPGVECPLSLTLSLLPKGKL*SGTRST Trigger: GGTGCTTCTGGTTCCAGACAACAGCTTCCCCTTGGG...TAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATGAACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAAAGCAGGTTGGTCCCTaGGCTCCCCTTCATCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TWGRMSPIPHPQLIRLEKKQVGP*APLHRL Trigger: AAGGCGATGAAGGGGAGCCAAGGGACCAACCTGCTT...TTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR CAA 90 bp | GGGATCCAGATCTGCTGTTGGATTTCCTCGCTGTTCCACACCATGTTCAGCAGTAAGTCCATGCTGGCATaGTGCTCCGAAGTCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GIQICCWISSLFHTMFSSKSMLA*CSEVCR Trigger: TCTGCAGACTTCGGAGCACAATGCCAGCATGGACTT...ACTGCTGAACATGGTGTGGAACAGCGAGGAAATCCAACAGCAGATCTGGATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
||
| CDS-3UTR CAA 90 bp | GAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGTTTGTGCATAAAGACTGACCCATaGACCGGGGCTGAGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ECPLSLTLSLLDWKKSLCIKTDP*TGAEGG Trigger: ACCACCCTCAGCCCCGGTCAATGGGTCAGTCTTTAT...GCACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR CAA 90 bp | GAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAGATCCAGATCTGCTGTaGGATTTCCTCGCTGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EPGVECPLSLTLSLLDWKDPDLL*DFLAVP Trigger: TGGAACAGCGAGGAAATCCAACAGCAGATCTGGATC...TTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR CAA 90 bp | GAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAACCTTGAGGTCAAAGTaGCAGTCGAATCTTCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EPGVECPLSLTLSLLDWKTLRSK*QSNLRS Trigger: GCTTCGAAGATTCGACTGCAACTTTGACCTCAAGGT...TTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCATGAACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGGAAGTACTCGAAGCTaGTCCCCATCCTCATATTCA | + |
|
Preference number: 5 (lower is better) Translates to: WVHEPGVECPLSLTLSLLGSTRS*SPSSYS Trigger: TGAATATGAGGATGGGGACAAGCTTCGAGTACTTCC...TAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGTTCATGAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGGTAGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAATGTTCAGCAGTTCATaGGAATTCACATTGTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TWGRMSPIPHPQLIRLEKMFSSS*EFTLCT Trigger: GGTGCACAATGTGAATTCCAATGAACTGCTGAACAT...TTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCTACCCCAGGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS-3UTR CAA 90 bp | AGAATGTCCCCTATCCCTCACCCTCAGCTTATTAGACTGGAAAAAGAGTTTGTGAGGAATCTGTTTCAGTaGCTCTTTGGTAAGTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RMSPIPHPQLIRLEKEFVRNLFQ*LFGKSV Trigger: AACCGACTTACCAAAGAGCAACTGAAACAGATTCCT...CACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGACATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037534.8 |
||
| CDS CAA 90 bp | GTGGCCCCAAACAGAGCTGGAAGGTCTGCAAAGTCCATGCTGGCATaGTGCTCCGAAGTCGCTCGAATCAGCCCTCGGACAGGGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VAPNRAGRSAKSMLA*CSEVARISPRTGAA Trigger: AGCAGCCCCTGTCCGAGGGCTGATTCGAGCGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTTTGGGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
||
| CDS CAA 90 bp | GTGGCCCCAAACAGAGCTGGAAGGTCTGCAAAGTCCATGCTGGCATaGTGCTCCGAAGTCTGCAGACGGAACACGCTCGAATCAGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VAPNRAGRSAKSMLA*CSEVCRRNTLESAL Trigger: GAGGGCTGATTCGAGCGTGTTCCGTCTGCAGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTTTGGGGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
||
| CDS GCA 72 bp | AGAGCTGGAAGGTCTGCAAAGTCCATGCTGGCATTGTaGTCCGAAGTCGCTCGAATCAGCCCTCGGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RAGRSAKSMLAL*SEVARISPRTG Trigger: CCCTGTCCGAGGGCTGATTCGAGCGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
||
| CDS GCA 72 bp | TCTGCAAAGTCCATGCTGGCATTGTGCTCCGAAGTCTaGAGACGGAACACGCTCGAATCAGCCCTCGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: SAKSMLALCSEV*RRNTLESALGQ Trigger: CTGTCCGAGGGCTGATTCGAGCGTGTTCCGTCTGCAGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
||
| CDS CCA 72 bp | CCCCAAACAGAGCTGGAAGGTCTGCAAAGTCCATGCTaGCATTGTGCTCCGAAGTCGCTCGAATCAGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PQTELEGLQSPC*HCAPKSLESAL Trigger: GAGGGCTGATTCGAGCGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
||
| CDS CCA 72 bp | CCCCAAACAGAGCTGGAAGGTCTGCAAAGTCCATGCTaGCATTGTGCTCCGAAGTCTGCAGACGGAACACGC | + |
|
Preference number: 6 (lower is better) Translates to: PQTELEGLQSPC*HCAPKSADGTR Trigger: GCGTGTTCCGTCTGCAGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
||
| CDS CAA 72 bp | AACAGAGCTGGAAGGTCTGCAAAGTCCATGCTGGCATaGTGCTCCGAAGTCGCTCGAATCAGCCCTCGGACA | + |
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Preference number: 6 (lower is better) Translates to: NRAGRSAKSMLA*CSEVARISPRT Trigger: TGTCCGAGGGCTGATTCGAGCGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037534.8 ENSMUST00000141695.8 |
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| CDS GCA 72 bp | AGAGCTGGAAGGTCTGCAAAGTCCATGCTGGCATTGTaGTCCGAAGTCTGCAGACGGAACACGCTCGAATCA | + |
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Preference number: 6 (lower is better) Translates to: RAGRSAKSMLAL*SEVCRRNTLES Trigger: TGATTCGAGCGTGTTCCGTCTGCAGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
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| CDS CAA 72 bp | AACAGAGCTGGAAGGTCTGCAAAGTCCATGCTGGCATaGTGCTCCGAAGTCTGCAGACGGAACACGCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: NRAGRSAKSMLA*CSEVCRRNTLE Trigger: TTCGAGCGTGTTCCGTCTGCAGACTTCGGAGCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152160.8 |
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