Pregenerated sensors for RNF166 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014470Ensembl transcript IDs: ENSMUST00000014614.4
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAATGCTCACGGTGGAAGCGAAGCTAGGGACCGACCGGGTGGGCTaGCAGCCTTGGCTGGGCACCTCTTCCCCTGGCCCTGCTGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: QMLTVEAKLGTDRVG*QPWLGTSSPGPAGH Trigger: GTGCCCAGCAGGGCCAGGGGAAGAGGTGCCCAGCCAAGGCTGCCAGCCCACCCGGTCGGTCCCTAGCTTCGCTTCCACCGTGAGCATTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR GCA 90 bp | CCGGGTGGGCTGGCAGCCTTGGCTGGGCACCTCTTCCCCTGGCCCTaGTGGGCACAGCTTAGGGCACCTCATCCTTCTCCACACACAGAC | + |
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Preference number: 1 (lower is better) Translates to: PGGLAALAGHLFPWP*WAQLRAPHPSPHTD Trigger: GTCTGTGTGTGGAGAAGGATGAGGTGCCCTAAGCTGTGCCCAGCAGGGCCAGGGGAAGAGGTGCCCAGCCAAGGCTGCCAGCCCACCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR TCA 90 bp | GAAAGGCAGCCACCTGCTCTGACCCAATGGCCAGCACTTGCCCCTTaGAGCACCGAGGGCCCAGTGCTGCTGGCCAGGACCTGGTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: ERQPPALTQWPALAP*STEGPVLLARTWWS Trigger: GGACCACCAGGTCCTGGCCAGCAGCACTGGGCCCTCGGTGCTTCAAGGGGCAAGTGCTGGCCATTGGGTCAGAGCAGGTGGCTGCCTTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR GCA 90 bp | AGTCTGGGAAAGGCAGCCACCTGCTCTGACCCAATGGCCAGCACTTaGCCCTTGAAGCACCGAGGGCCCAGTGCTGCTGGCCAGGACCTG | + |
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Preference number: 1 (lower is better) Translates to: SLGKAATCSDPMAST*PLKHRGPSAAGQDL Trigger: CAGGTCCTGGCCAGCAGCACTGGGCCCTCGGTGCTTCAAGGGGCAAGTGCTGGCCATTGGGTCAGAGCAGGTGGCTGCCTTTCCCAGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CCA 90 bp | TTCTGTCTGGGCTGTCCTACATCTGCTGGGAGCAGCCACAGCAAGTaGCCCGCCGGTGCTAGGGTTTCTTCTGGGTCATCAAGAGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: FCLGCPTSAGSSHSK*PAGARVSSGSSRES Trigger: GCTTTCTCTTGATGACCCAGAAGAAACCCTAGCACCGGCGGGCCACTTGCTGTGGCTGCTCCCAGCAGATGTAGGACAGCCCAGACAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CCA 90 bp | AGATCACATGGCTTGGGGACGCCACCTGTCACACAGACAAAGCCCTaGCCACACCCACGCTCCTCCCTCTACACTCATCCCACATGTTTT | + |
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Preference number: 1 (lower is better) Translates to: RSHGLGTPPVTQTKP*PHPRSSLYTHPTCF Trigger: AAAACATGTGGGATGAGTGTAGAGGGAGGAGCGTGGGTGTGGCCAGGGCTTTGTCTGTGTGACAGGTGGCGTCCCCAAGCCATGTGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CAA 90 bp | AGCACCGAGGGCCCAGTGCTGCTGGCCAGGACCTGGTGGTCCTGCTaGATGACAAGGGGCCAGCTAGCCAGGATCCCAGCCTGGGGATTC | + |
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Preference number: 2 (lower is better) Translates to: STEGPVLLARTWWSC*MTRGQLARIPAWGF Trigger: GAATCCCCAGGCTGGGATCCTGGCTAGCTGGCCCCTTGTCATCAAGCAGGACCACCAGGTCCTGGCCAGCAGCACTGGGCCCTCGGTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CAA 90 bp | GGAAAGGCAGCCACCTGCTCTGACCCAATGGCCAGCACTTGCCCCTaGAAGCACCGAGGGCCCAGTGCTGCTGGCCAGGACCTGGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: GKAATCSDPMASTCP*KHRGPSAAGQDLVV Trigger: GACCACCAGGTCCTGGCCAGCAGCACTGGGCCCTCGGTGCTTCAAGGGGCAAGTGCTGGCCATTGGGTCAGAGCAGGTGGCTGCCTTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTGGGCACCTCTTCCCCTGGCCCTGCTGGGCACAGCTTAGGGCACCTCATGGCAGCCACCTGCTCTaGCCCAATGGCCAGCACTTG | + |
|
Preference number: 2 (lower is better) Translates to: LAGHLFPWPCWAQLRAPHGSHLL*PNGQHL Trigger: CAAGTGCTGGCCATTGGGTCAGAGCAGGTGGCTGCC...ATGAGGTGCCCTAAGCTGTGCCCAGCAGGGCCAGGGGAAGAGGTGCCCAGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGGGCAGAAGGACTCCATTCTGTCTGGGCTGTCCTACATCTGCTGGGAGCGGGCACCTCTTCCCCTaGCCCTGCTGGGCACAGCTT | + |
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Preference number: 2 (lower is better) Translates to: GQGRRTPFCLGCPTSAGSGHLFP*PCWAQL Trigger: AAGCTGTGCCCAGCAGGGCCAGGGGAAGAGGTGCCC...GCTCCCAGCAGATGTAGGACAGCCCAGACAGAATGGAGTCCTTCTGCCCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR-3UTR CCA 90 bp | ACACCAAGTCTGGGAAAGGCAGCCACCTGCTCTGACCCAATGGCCAGCACTTGCAGGGCCCAGTGCTGCTaGCCAGGACCTGGTGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TPSLGKAATCSDPMASTCRAQCC*PGPGGP Trigger: AGGACCACCAGGTCCTGGCCAGCAGCACTGGGCCCT...GCAAGTGCTGGCCATTGGGTCAGAGCAGGTGGCTGCCTTTCCCAGACTTGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTACCACTGGTAAGGGAAGTCCCTGCCTGAGGAGGGATGCGGTTGGCTCTGCACTCCTGTGCAGGTaGCAGGGCAGAAGGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: GSTTGKGSPCLRRDAVGSALLCR*QGRRAT Trigger: TGTTGCCCTTCTGCCCTGGCACCTGCACAGGAGTGC...AGAGCCAACCGCATCCCTCCTCAGGCAGGGACTTCCCTTACCAGTGGTAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CAA 90 bp | AGAGAAAGCACCAGACAGGAGCCACCTCCTCAGAGATCACATGGCTaGGGGACGCCACCTGTCACACAGACAAAGCCCTGGCCACACCCA | + |
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Preference number: 2 (lower is better) Translates to: RESTRQEPPPQRSHG*GTPPVTQTKPWPHP Trigger: TGGGTGTGGCCAGGGCTTTGTCTGTGTGACAGGTGGCGTCCCCAAGCCATGTGATCTCTGAGGAGGTGGCTCCTGTCTGGTGCTTTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTACCACTGGTAAGGGAAGTCCCTGCCTGAGGAGGGATGCGGTTGGCTCTAGAGATCACATGGCTTaGGGACGCCACCTGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: GSTTGKGSPCLRRDAVGSRDHMA*GRHLSH Trigger: GTGTGACAGGTGGCGTCCCCAAGCCATGTGATCTCT...AGAGCCAACCGCATCCCTCCTCAGGCAGGGACTTCCCTTACCAGTGGTAGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR-3UTR CCA 90 bp | GACCTGCCACCAAGCAGGTCTCTCTGGCCCTTGAGGGCTCTACCACTGGTAAGGCTGTCCTACATCTGCTaGGAGCAGCCACAGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: DLPPSRSLWPLRALPLVRLSYIC*EQPQQV Trigger: CACTTGCTGTGGCTGCTCCCAGCAGATGTAGGACAG...CCTTACCAGTGGTAGAGCCCTCAAGGGCCAGAGAGACCTGCTTGGTGGCAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR-3UTR GCA 90 bp | GACCTGCCACCAAGCAGGTCTCTCTGGCCCTTGAGGGCTCTACCACTGGTAAGGAAAGCCAGTACCAAATaGTCACGGTGGAAGCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: DLPPSRSLWPLRALPLVRKASTK*SRWKRS Trigger: GCTTCGCTTCCACCGTGAGCATTTGGTACTGGCTTT...CCTTACCAGTGGTAGAGCCCTCAAGGGCCAGAGAGACCTGCTTGGTGGCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR-3UTR GCA 90 bp | AAATATCACAAAAGCCAGTACCAAATGCTCACGGTGGAAGCGAAGCTAGGGACCCGGGAGTGTGTCTTCTaGCCCATAAGAGGCGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: KYHKSQYQMLTVEAKLGTRECVF*PIRGGW Trigger: CCACCCGCCTCTTATGGGGCAGAAGACACACTCCCG...GGTCCCTAGCTTCGCTTCCACCGTGAGCATTTGGTACTGGCTTTTGTGATATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGGTCATCAAGAGAAAGCACCAGACAGGAGCCACCTCCTCAGAGATCACACACAGACACCAAGTCTaGGAAAGGCAGCCACCTGCT | + |
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Preference number: 2 (lower is better) Translates to: FWVIKRKHQTGATSSEITHRHQV*ERQPPA Trigger: AGCAGGTGGCTGCCTTTCCCAGACTTGGTGTCTGTG...TGTGATCTCTGAGGAGGTGGCTCCTGTCTGGTGCTTTCTCTTGATGACCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CCA 72 bp | ACGGTGGAAGCGAAGCTAGGGACCGACCGGGTGGGCTaGCAGCCTTGGCTGGGCACCTCTTCCCCTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: TVEAKLGTDRVG*QPWLGTSSPGP Trigger: AGGGCCAGGGGAAGAGGTGCCCAGCCAAGGCTGCCAGCCCACCCGGTCGGTCCCTAGCTTCGCTTCCACCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR TCA 72 bp | CCACCTGCTCTGACCCAATGGCCAGCACTTGCCCCTTaGAGCACCGAGGGCCCAGTGCTGCTGGCCAGGACC | + |
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Preference number: 3 (lower is better) Translates to: PPALTQWPALAP*STEGPVLLART Trigger: GGTCCTGGCCAGCAGCACTGGGCCCTCGGTGCTTCAAGGGGCAAGTGCTGGCCATTGGGTCAGAGCAGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CCA 72 bp | AGCACCGAGGGCCCAGTGCTGCTGGCCAGGACCTGGTaGTCCTGCTTGATGACAAGGGGCCAGCTAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: STEGPVLLARTW*SCLMTRGQLAR Trigger: CCTGGCTAGCTGGCCCCTTGTCATCAAGCAGGACCACCAGGTCCTGGCCAGCAGCACTGGGCCCTCGGTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR GCA 72 bp | GAGGGCCCAGTGCTGCTGGCCAGGACCTGGTGGTCCTaGTTGATGACAAGGGGCCAGCTAGCCAGGATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: EGPVLLARTWWS*LMTRGQLARIP Trigger: TGGGATCCTGGCTAGCTGGCCCCTTGTCATCAAGCAGGACCACCAGGTCCTGGCCAGCAGCACTGGGCCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR GCA 72 bp | AAGGCAGCCACCTGCTCTGACCCAATGGCCAGCACTTaGCCCTTGAAGCACCGAGGGCCCAGTGCTGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: KAATCSDPMAST*PLKHRGPSAAG Trigger: GCCAGCAGCACTGGGCCCTCGGTGCTTCAAGGGGCAAGTGCTGGCCATTGGGTCAGAGCAGGTGGCTGCCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR-3UTR CAA 90 bp | GGTGACAGGGCAGGGCAGAAGGACTCCATTCTGTCTGGGCTGTCCTACATCTGCGGTGGGCTGGCAGCCTaGGCTGGGCACCTCTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: GDRAGQKDSILSGLSYICGGLAA*AGHLFP Trigger: GGGGAAGAGGTGCCCAGCCAAGGCTGCCAGCCCACC...GCAGATGTAGGACAGCCCAGACAGAATGGAGTCCTTCTGCCCTGCCCTGTCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR GCA 72 bp | CAGAAGGACTCCATTCTGTCTGGGCTGTCCTACATCTaGTGGGAGCAGCCACAGCAAGTGGCCCGCCGGTGC | + |
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Preference number: 3 (lower is better) Translates to: QKDSILSGLSYI*WEQPQQVARRC Trigger: GCACCGGCGGGCCACTTGCTGTGGCTGCTCCCAGCAGATGTAGGACAGCCCAGACAGAATGGAGTCCTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CCA 72 bp | CCAGACAGGAGCCACCTCCTCAGAGATCACATGGCTTaGGGACGCCACCTGTCACACAGACAAAGCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: PDRSHLLRDHMA*GRHLSHRQSPG Trigger: GCCAGGGCTTTGTCTGTGTGACAGGTGGCGTCCCCAAGCCATGTGATCTCTGAGGAGGTGGCTCCTGTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR TCA 72 bp | ACAGACACCAAGTCTGGGAAAGGCAGCCACCTGCTCTaGCCCAATGGCCAGCACTTGCCCCTTGAAGCACCG | + |
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Preference number: 3 (lower is better) Translates to: TDTKSGKGSHLL*PNGQHLPLEAP Trigger: CGGTGCTTCAAGGGGCAAGTGCTGGCCATTGGGTCAGAGCAGGTGGCTGCCTTTCCCAGACTTGGTGTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR GCA 72 bp | CACACACAGACACCAAGTCTGGGAAAGGCAGCCACCTaGTCTGACCCAATGGCCAGCACTTGCCCCTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: HTQTPSLGKAAT*SDPMASTCPLK Trigger: CTTCAAGGGGCAAGTGCTGGCCATTGGGTCAGAGCAGGTGGCTGCCTTTCCCAGACTTGGTGTCTGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CCA 72 bp | AAGCACCAGACAGGAGCCACCTCCTCAGAGATCACATaGCTTGGGGACGCCACCTGTCACACAGACAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: KHQTGATSSEIT*LGDATCHTDKA Trigger: GGCTTTGTCTGTGTGACAGGTGGCGTCCCCAAGCCATGTGATCTCTGAGGAGGTGGCTCCTGTCTGGTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR TCA 72 bp | AGGGGCCAGCTAGCCAGGATCCCAGCCTGGGGATTCTaGGACCAACTCTCCTTGTGTAACATTCCACTTGGC | + |
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Preference number: 3 (lower is better) Translates to: RGQLARIPAWGF*DQLSLCNIPLG Trigger: GCCAAGTGGAATGTTACACAAGGAGAGTTGGTCTCAGAATCCCCAGGCTGGGATCCTGGCTAGCTGGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CCA 72 bp | GTTTTCTTGCCTGACCTGCCACCAAGCAGGTCTCTCTaGCCCTTGAGGGCTCTACCACTGGTAAGGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: VFLPDLPPSRSL*PLRALPLVREV Trigger: GACTTCCCTTACCAGTGGTAGAGCCCTCAAGGGCCAGAGAGACCTGCTTGGTGGCAGGTCAGGCAAGAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR TCA 72 bp | AAGACAGCAATTTATGCCATGAACAGAATAAGATGCTaGCAAATGTTTTCTTGCCTGACCTGCCACCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: KTAIYAMNRIRC*QMFSCLTCHQA Trigger: TGCTTGGTGGCAGGTCAGGCAAGAAAACATTTGTCAGCATCTTATTCTGTTCATGGCATAAATTGCTGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR TCA 90 bp | CGGGTGGGCTGGCAGCCTTGGCTGGGCACCTCTTCCCCTGGCCCTGCTGGGCACGGCAGATGGGACAGCTaGACTGCGCCTCCAGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: RVGWQPWLGTSSPGPAGHGRWDS*TAPPGR Trigger: GCGGCCTGGAGGCGCAGTTCAGCTGTCCCATCTGCC...GTGCCCAGCAGGGCCAGGGGAAGAGGTGCCCAGCCAAGGCTGCCAGCCCACCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR GCA 90 bp | AAGCTAGGGACCGACCGGGTGGGCTGGCAGCCTTGGCTGGGCACCTCTTCCCCTACGTGTGGCCGCAGCTaGCGATGGCCACTGGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: KLGTDRVGWQPWLGTSSPTCGRS*RWPLAD Trigger: ATCGGCCAGTGGCCATCGGCAGCTGCGGCCACACGT...AGGGGAAGAGGTGCCCAGCCAAGGCTGCCAGCCCACCCGGTCGGTCCCTAGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | AAGCTAGGGACCGACCGGGTGGGCTGGCAGCCTTGGCTGGGCACCTCTTCCCCTGCTGCCGATGGCCACTaGCCGATGGTACACCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: KLGTDRVGWQPWLGTSSPAADGH*PMVHLQ Trigger: CTGGAGGTGTACCATCGGCCAGTGGCCATCGGCAGC...AGGGGAAGAGGTGCCCAGCCAAGGCTGCCAGCCCACCCGGTCGGTCCCTAGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | CCCTTGAAGCACCGAGGGCCCAGTGCTGCTGGCCAGGACCTGGTGGTCCTGCTTGGCCGCAGCTGCCGATaGCCACTGGCCGATGGTACA | + |
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Preference number: 4 (lower is better) Translates to: PLKHRGPSAAGQDLVVLLGRSCR*PLADGT Trigger: TGTACCATCGGCCAGTGGCCATCGGCAGCTGCGGCC...AAGCAGGACCACCAGGTCCTGGCCAGCAGCACTGGGCCCTCGGTGCTTCAAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CAA 72 bp | GCCACCTGCTCTGACCCAATGGCCAGCACTTGCCCCTaGAAGCACCGAGGGCCCAGTGCTGCTGGCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: ATCSDPMASTCP*KHRGPSAAGQD Trigger: GTCCTGGCCAGCAGCACTGGGCCCTCGGTGCTTCAAGGGGCAAGTGCTGGCCATTGGGTCAGAGCAGGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | CCTTGGCTGGGCACCTCTTCCCCTGGCCCTGCTGGGCACAGCTTAGGGCACCTCATGGCCACTGGCCGATaGTACACCTCCAGGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: PWLGTSSPGPAGHSLGHLMATGR*YTSRQM Trigger: CATCTGCCTGGAGGTGTACCATCGGCCAGTGGCCAT...GAGGTGCCCTAAGCTGTGCCCAGCAGGGCCAGGGGAAGAGGTGCCCAGCCAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | GGGCAGGGCAGAAGGACTCCATTCTGTCTGGGCTGTCCTACATCTGCTGGGAGCTCCCCGCAGAACGTGTaGCCGCAGCTGCCGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: GQGRRTPFCLGCPTSAGSSPQNV*PQLPMA Trigger: GGCCATCGGCAGCTGCGGCCACACGTTCTGCGGGGA...GCTCCCAGCAGATGTAGGACAGCCCAGACAGAATGGAGTCCTTCTGCCCTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | AGGGCAGGGCAGAAGGACTCCATTCTGTCTGGGCTGTCCTACATCTGCTGGGAGCGGCACCTGCAGACATaGCTGGAGGCACTCCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: RAGQKDSILSGLSYICWERHLQT*LEALPA Trigger: TGCGGGGAGTGCCTCCAGCCATGTCTGCAGGTGCCG...CTCCCAGCAGATGTAGGACAGCCCAGACAGAATGGAGTCCTTCTGCCCTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR TCA 90 bp | GGGCACCTCATCCTTCTCCACACACAGACACCAAGTCTGGGAAAGGCAGCCACCTTGCTGGGGATGGGCTaGGATGTGGGCACCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: GHLILLHTQTPSLGKAATLLGMG*DVGTTG Trigger: CCCTGTGGTGCCCACATCTCAGCCCATCCCCAGCAA...GGTGGCTGCCTTTCCCAGACTTGGTGTCTGTGTGTGGAGAAGGATGAGGTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | AAGCTAGGGACCGACCGGGTGGGCTGGCAGCCTTGGCTGGGCACCTCTTCCCCTTGTGCGCTCTCATCTTaGCCAGTGTCACCTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: KLGTDRVGWQPWLGTSSPCALSS*PVSPSC Trigger: ACAAGAAGGTGACACTGGCCAAGATGAGAGCGCACA...AGGGGAAGAGGTGCCCAGCCAAGGCTGCCAGCCCACCCGGTCGGTCCCTAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CAA 72 bp | TTGCCTGACCTGCCACCAAGCAGGTCTCTCTGGCCCTaGAGGGCTCTACCACTGGTAAGGGAAGTCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LPDLPPSRSLWP*RALPLVREVPA Trigger: GGCAGGGACTTCCCTTACCAGTGGTAGAGCCCTCAAGGGCCAGAGAGACCTGCTTGGTGGCAGGTCAGGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR GCA 90 bp | TCCTTGTGTAACATTCCACTTGGCCTGGTGAGGCGCACTCCTGTGCAGGTGCCAATGGGACAGCTGAACTaGGCCTCCAGGCCGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: SLCNIPLGLVRRTPVQVPMGQLN*ASRPLS Trigger: CGACAGCGGCCTGGAGGCGCAGTTCAGCTGTCCCAT...TGGCACCTGCACAGGAGTGCGCCTCACCAGGCCAAGTGGAATGTTACACAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR GCA 90 bp | ACACCAAGTCTGGGAAAGGCAGCCACCTGCTCTGACCCAATGGCCAGCACTTGCTGCCGGTGCAGCAGATaGTGCAGGAAGTTGGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: TPSLGKAATCSDPMASTCCRCSR*CRKLAL Trigger: AAGCGCCAACTTCCTGCAGCATCTGCTGCACCGGCA...GCAAGTGCTGGCCATTGGGTCAGAGCAGGTGGCTGCCTTTCCCAGACTTGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | GGTGACAGGGCAGGGCAGAAGGACTCCATTCTGTCTGGGCTGTCCTACATCTGCCCTTGTCCACTTTCTTaGGGTCGAAGGGCAGACGGC | + |
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Preference number: 4 (lower is better) Translates to: GDRAGQKDSILSGLSYICPCPLS*GRRADG Trigger: GCCGTCTGCCCTTCGACCCCAAGAAAGTGGACAAGG...GCAGATGTAGGACAGCCCAGACAGAATGGAGTCCTTCTGCCCTGCCCTGTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR GCA 90 bp | GGCAGAAGGACTCCATTCTGTCTGGGCTGTCCTACATCTGCTGGGAGCAGCCACCGGTGCAGCAGATGCTaGAGGAAGTTGGCGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: GRRTPFCLGCPTSAGSSHRCSRC*RKLALL Trigger: CAAAAGCGCCAACTTCCTGCAGCATCTGCTGCACCG...GTGGCTGCTCCCAGCAGATGTAGGACAGCCCAGACAGAATGGAGTCCTTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | AGGGCAGAAGGACTCCATTCTGTCTGGGCTGTCCTACATCTGCTGGGAGCAGCCGGATATTGCTGGGGATaGGCTGAGATGTGGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: RAEGLHSVWAVLHLLGAAGYCWG*AEMWAP Trigger: TGGTGCCCACATCTCAGCCCATCCCCAGCAATATCC...GGCTGCTCCCAGCAGATGTAGGACAGCCCAGACAGAATGGAGTCCTTCTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | GTGCTAGGGTTTCTTCTGGGTCATCAAGAGAAAGCACCAGACAGGAGCCACCTCACCTGCAGACATGGCTaGAGGCACTCCCCGCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: VLGFLLGHQEKAPDRSHLTCRHG*RHSPQN Trigger: GTTCTGCGGGGAGTGCCTCCAGCCATGTCTGCAGGT...GAGGTGGCTCCTGTCTGGTGCTTTCTCTTGATGACCCAGAAGAAACCCTAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | AGGGCAGGGCAGAAGGACTCCATTCTGTCTGGGCTGTCCTACATCTGCTGGGAGGATGCTGCAGGAAGTTaGCGCTTTTGTAGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: RAGQKDSILSGLSYICWEDAAGS*RFCSWG Trigger: ACCCCAGCTACAAAAGCGCCAACTTCCTGCAGCATC...CTCCCAGCAGATGTAGGACAGCCCAGACAGAATGGAGTCCTTCTGCCCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR TCA 90 bp | AAATATCACAAAAGCCAGTACCAAATGCTCACGGTGGAAGCGAAGCTAGGGACCTTCACCAGCTCCTGCTaGTCCAGATTGCGGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KYHKSQYQMLTVEAKLGTFTSSC*SRLRAP Trigger: CGGAGCCCGCAATCTGGATCAGCAGGAGCTGGTGAA...GGTCCCTAGCTTCGCTTCCACCGTGAGCATTTGGTACTGGCTTTTGTGATATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGGGATTCTGAGACCAACTCTCCTTGTGTAACATTCCACTTGGCCTGGGCTTCTCTACATGGGTaGCCTTGTCCACTTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: QPGDSETNSPCVTFHLAWASLHG*PCPLSW Trigger: CCAAGAAAGTGGACAAGGCCACCCATGTAGAGAAGC...CCAGGCCAAGTGGAATGTTACACAAGGAGAGTTGGTCTCAGAATCCCCAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| 3UTR CAA 72 bp | TGCCATGAACAGAATAAGATGCTGACAAATGTTTTCTaGCCTGACCTGCCACCAAGCAGGTCTCTCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: CHEQNKMLTNVF*PDLPPSRSLWP Trigger: GGGCCAGAGAGACCTGCTTGGTGGCAGGTCAGGCAAGAAAACATTTGTCAGCATCTTATTCTGTTCATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR GCA 90 bp | AAAATACTGCTCTTCCTAGTCAAACCTGGGTATTGCGATAGAAGAGTAACTGCTGGGCAGTTAGCCATCTaGTCCTGGACCTTCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KILLFLVKPGYCDRRVTAGQLAI*SWTFRQ Trigger: CTGCCTGAAGGTCCAGGAGCAGATGGCTAACTGCCC...AGCAGTTACTCTTCTATCGCAATACCCAGGTTTGACTAGGAAGAGCAGTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR GCA 90 bp | AAAATACTGCTCTTCCTAGTCAAACCTGGGTATTGCGATAGAAGAGTAACTGCTGAGAACTTGTGCCGGTaGAGCAGATGCTGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KILLFLVKPGYCDRRVTAENLCR*SRCCRK Trigger: CTTCCTGCAGCATCTGCTGCACCGGCACAAGTTCTC...AGCAGTTACTCTTCTATCGCAATACCCAGGTTTGACTAGGAAGAGCAGTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CCA 90 bp | AAAATACTGCTCTTCCTAGTCAAACCTGGGTATTGCGATAGAAGAGTAACTGCTAGTTGCTTCTCTACATaGGTGGCCTTGTCCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: KILLFLVKPGYCDRRVTASCFST*VALSTF Trigger: GAAAGTGGACAAGGCCACCCATGTAGAGAAGCAACT...AGCAGTTACTCTTCTATCGCAATACCCAGGTTTGACTAGGAAGAGCAGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CCA 90 bp | GGGCAGACGGCAGAGTGGGCACAGAGGGGACGGCACCTGCAGACATaGCTGGAGGCACTCCCCGCAGAACGTGTGGCCGCAGCTGCCGAT | + |
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Preference number: 5 (lower is better) Translates to: GQTAEWAQRGRHLQT*LEALPAERVAAAAD Trigger: ATCGGCAGCTGCGGCCACACGTTCTGCGGGGAGTGCCTCCAGCCATGTCTGCAGGTGCCGTCCCCTCTGTGCCCACTCTGCCGTCTGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CCA 90 bp | GGTGGCCTTGTCCACTTTCTTGGGGTCGAAGGGCAGACGGCAGAGTaGGCACAGAGGGGACGGCACCTGCAGACATGGCTGGAGGCACTC | + |
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Preference number: 5 (lower is better) Translates to: GGLVHFLGVEGQTAE*AQRGRHLQTWLEAL Trigger: GAGTGCCTCCAGCCATGTCTGCAGGTGCCGTCCCCTCTGTGCCCACTCTGCCGTCTGCCCTTCGACCCCAAGAAAGTGGACAAGGCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CCA 90 bp | CCCGACAGGGTGCCTTGTAGGATGAGAGTTGCTTCTCTACATGGGTaGCCTTGTCCACTTTCTTGGGGTCGAAGGGCAGACGGCAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: PDRVPCRMRVASLHG*PCPLSWGRRADGRV Trigger: CACTCTGCCGTCTGCCCTTCGACCCCAAGAAAGTGGACAAGGCCACCCATGTAGAGAAGCAACTCTCATCCTACAAGGCACCCTGTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CCA 90 bp | GTGGGCACCACAGGGACGAATTTGGGGCAGTTAGCCATCTGCTCCTaGACCTTCAGGCAGGAGGAAATGTGCGCTCTCATCTTGGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: VGTTGTNLGQLAICS*TFRQEEMCALILAS Trigger: ACTGGCCAAGATGAGAGCGCACATTTCCTCCTGCCTGAAGGTCCAGGAGCAGATGGCTAACTGCCCCAAATTCGTCCCTGTGGTGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CCA 90 bp | TCTGCTCCTGGACCTTCAGGCAGGAGGAAATGTGCGCTCTCATCTTaGCCAGTGTCACCTTCTTGTTGCAACCCCGACAGGGTGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: SAPGPSGRRKCALSS*PVSPSCCNPDRVPC Trigger: ACAAGGCACCCTGTCGGGGTTGCAACAAGAAGGTGACACTGGCCAAGATGAGAGCGCACATTTCCTCCTGCCTGAAGGTCCAGGAGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CAA 90 bp | CCGGTGCTAGGGTTTCTTCTGGGTCATCAAGAGAAAGCACCAGACAGGAGCCACTCTACATGGGTGGCCTaGTCCACTTTCTTGGGGTCG | + |
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Preference number: 5 (lower is better) Translates to: PVLGFLLGHQEKAPDRSHSTWVA*STFLGS Trigger: CGACCCCAAGAAAGTGGACAAGGCCACCCATGTAGA...GTGGCTCCTGTCTGGTGCTTTCTCTTGATGACCCAGAAGAAACCCTAGCACCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS TCA 90 bp | CAGTGTCACCTTCTTGTTGCAACCCCGACAGGGTGCCTTGTAGGATaGGAGTTGCTTCTCTACATGGGTGGCCTTGTCCACTTTCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: QCHLLVATPTGCLVG*ELLLYMGGLVHFLG Trigger: CCCAAGAAAGTGGACAAGGCCACCCATGTAGAGAAGCAACTCTCATCCTACAAGGCACCCTGTCGGGGTTGCAACAAGAAGGTGACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS-3UTR CAA 90 bp | AAATATCACAAAAGCCAGTACCAAATGCTCACGGTGGAAGCGAAGCTAGGGACCGCCTTGTCCACTTTCTaGGGGTCGAAGGGCAGACGG | + |
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Preference number: 5 (lower is better) Translates to: KYHKSQYQMLTVEAKLGTALSTF*GSKGRR Trigger: CCGTCTGCCCTTCGACCCCAAGAAAGTGGACAAGGC...GGTCCCTAGCTTCGCTTCCACCGTGAGCATTTGGTACTGGCTTTTGTGATATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS GCA 90 bp | AGGAGGAAATGTGCGCTCTCATCTTGGCCAGTGTCACCTTCTTGTTaGAACCCCGACAGGGTGCCTTGTAGGATGAGAGTTGCTTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: RRKCALSSWPVSPSC*NPDRVPCRMRVASL Trigger: TAGAGAAGCAACTCTCATCCTACAAGGCACCCTGTCGGGGTTGCAACAAGAAGGTGACACTGGCCAAGATGAGAGCGCACATTTCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS GCA 72 bp | GGCAGACGGCAGAGTGGGCACAGAGGGGACGGCACCTaGAGACATGGCTGGAGGCACTCCCCGCAGAACGTG | + |
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Preference number: 6 (lower is better) Translates to: GRRQSGHRGDGT*RHGWRHSPQNV Trigger: CACGTTCTGCGGGGAGTGCCTCCAGCCATGTCTGCAGGTGCCGTCCCCTCTGTGCCCACTCTGCCGTCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CCA 72 bp | GCAGAGTGGGCACAGAGGGGACGGCACCTGCAGACATaGCTGGAGGCACTCCCCGCAGAACGTGTGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: AEWAQRGRHLQT*LEALPAERVAA Trigger: TGCGGCCACACGTTCTGCGGGGAGTGCCTCCAGCCATGTCTGCAGGTGCCGTCCCCTCTGTGCCCACTCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CCA 72 bp | CCCGCAGAACGTGTGGCCGCAGCTGCCGATGGCCACTaGCCGATGGTACACCTCCAGGCAGATGGGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: PAERVAAAADGH*PMVHLQADGTA Trigger: AGCTGTCCCATCTGCCTGGAGGTGTACCATCGGCCAGTGGCCATCGGCAGCTGCGGCCACACGTTCTGCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS GCA 72 bp | GGCACCACAGGGACGAATTTGGGGCAGTTAGCCATCTaGTCCTGGACCTTCAGGCAGGAGGAAATGTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: GTTGTNLGQLAI*SWTFRQEEMCA Trigger: AGCGCACATTTCCTCCTGCCTGAAGGTCCAGGAGCAGATGGCTAACTGCCCCAAATTCGTCCCTGTGGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS GCA 72 bp | CTGAGCAGATGGGGCATACCACACGGTTGGGATCACTaGGGTGACTTTCCACGCAGTGCTTCACCAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSRWGIPHGWDH*GDFPRSASPAP Trigger: AGGAGCTGGTGAAGCACTGCGTGGAAAGTCACCGCAGTGATCCCAACCGTGTGGTATGCCCCATCTGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CAA 90 bp | ATCTGCTCCTGGACCTTCAGGCAGGAGGAAATGTGCGCTCTCATCTaGGCCAGTGTCACCTTCTTGTTGCAACCCCGACAGGGTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ICSWTFRQEEMCALI*ASVTFLLQPRQGAL Trigger: CAAGGCACCCTGTCGGGGTTGCAACAAGAAGGTGACACTGGCCAAGATGAGAGCGCACATTTCCTCCTGCCTGAAGGTCCAGGAGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CCA 72 bp | GGACCTTCAGGCAGGAGGAAATGTGCGCTCTCATCTTaGCCAGTGTCACCTTCTTGTTGCAACCCCGACAGG | + |
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Preference number: 6 (lower is better) Translates to: GPSGRRKCALSS*PVSPSCCNPDR Trigger: CCTGTCGGGGTTGCAACAAGAAGGTGACACTGGCCAAGATGAGAGCGCACATTTCCTCCTGCCTGAAGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CCA 72 bp | AGGGCATTGCTGAGCAGATGGGGCATACCACACGGTTaGGATCACTGCGGTGACTTTCCACGCAGTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RALLSRWGIPHG*DHCGDFPRSAS Trigger: TGAAGCACTGCGTGGAAAGTCACCGCAGTGATCCCAACCGTGTGGTATGCCCCATCTGCTCAGCAATGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CCA 72 bp | ACAGGGACGAATTTGGGGCAGTTAGCCATCTGCTCCTaGACCTTCAGGCAGGAGGAAATGTGCGCTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: TGTNLGQLAICS*TFRQEEMCALI Trigger: GATGAGAGCGCACATTTCCTCCTGCCTGAAGGTCCAGGAGCAGATGGCTAACTGCCCCAAATTCGTCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS CAA 72 bp | TGGACCTTCAGGCAGGAGGAAATGTGCGCTCTCATCTaGGCCAGTGTCACCTTCTTGTTGCAACCCCGACAG | + |
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Preference number: 6 (lower is better) Translates to: WTFRQEEMCALI*ASVTFLLQPRQ Trigger: CTGTCGGGGTTGCAACAAGAAGGTGACACTGGCCAAGATGAGAGCGCACATTTCCTCCTGCCTGAAGGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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| CDS TCA 72 bp | CTTCTTGTTGCAACCCCGACAGGGTGCCTTGTAGGATaGGAGTTGCTTCTCTACATGGGTGGCCTTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLVATPTGCLVG*ELLLYMGGLVH Trigger: GTGGACAAGGCCACCCATGTAGAGAAGCAACTCTCATCCTACAAGGCACCCTGTCGGGGTTGCAACAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014614.4 |
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