Pregenerated sensors for RNF165 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025427Ensembl transcript IDs: ENSMUST00000026494.14, ENSMUST00000182024.2
Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CAGGAGCGGGGCATTGCCAGCCGGAGCATAGGGCCTGTCCTACTCTaGCCCCACACAACAGCACAGCGAGCCCGCGAGGAGCTCTGCGGG | + |
Preference number: 1 (lower is better) Translates to: QERGIASRSIGPVLL*PHTTAQRAREELCG Trigger: CCCGCAGAGCTCCTCGCGGGCTCGCTGTGCTGTTGTGTGGGGCCAGAGTAGGACAGGCCCTATGCTCCGGCTGGCAATGCCCCGCTCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR GCA 90 bp | CAACAGCACAGCGAGCCCGCGAGGAGCTCTGCGGGAGGCAGTGTCTaGCAGGCCTGGCAGTGTGGTAATTGTGCTCCACCGGCGTGGTGG | + |
Preference number: 1 (lower is better) Translates to: QQHSEPARSSAGGSV*QAWQCGNCAPPAWW Trigger: CCACCACGCCGGTGGAGCACAATTACCACACTGCCAGGCCTGGCAGACACTGCCTCCCGCAGAGCTCCTCGCGGGCTCGCTGTGCTGTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 90 bp | AGCTTGAGGCCTGTCACAGGTGGTGGCGAGGGTGACCGGGGAGACTaGGGTCCTTGGCAGGTGGAGGAACAACGTGCAGCCCCAGCTGCC | + |
Preference number: 1 (lower is better) Translates to: SLRPVTGGGEGDRGD*GPWQVEEQRAAPAA Trigger: GGCAGCTGGGGCTGCACGTTGTTCCTCCACCTGCCAAGGACCCCAGTCTCCCCGGTCACCCTCGCCACCACCTGTGACAGGCCTCAAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR TCA 90 bp | AAGAATGCTTGCACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCTTaGGGCCTGTCACAGGTGGTGGCGAGGGTGACCGGGGAGACTGGG | + |
Preference number: 1 (lower is better) Translates to: KNACTEAGGLCGRGA*GLSQVVARVTGETG Trigger: CCCAGTCTCCCCGGTCACCCTCGCCACCACCTGTGACAGGCCTCAAGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 90 bp | CCACCCAATCGGCAGCCCTCCCACCCTCGGCCTGGAAATGGGAGCTaGTCCAGGGCACAAGGACTCCAAGTACGTGGAAAGGGGAGGGGG | + |
Preference number: 1 (lower is better) Translates to: PPNRQPSHPRPGNGS*SRAQGLQVRGKGRG Trigger: CCCCCTCCCCTTTCCACGTACTTGGAGTCCTTGTGCCCTGGAGCAGCTCCCATTTCCAGGCCGAGGGTGGGAGGGCTGCCGATTGGGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CCA 90 bp | TGCCTCATCGCCGCTCCTTCCTGGCTTCCTGACCAGTCGGAGGACTaGGCAGAGGCACTGGCTTTTCTCCACCCAATCGGCAGCCCTCCC | + |
Preference number: 1 (lower is better) Translates to: CLIAAPSWLPDQSED*AEALAFLHPIGSPP Trigger: GGGAGGGCTGCCGATTGGGTGGAGAAAAGCCAGTGCCTCTGCCCAGTCCTCCGACTGGTCAGGAAGCCAGGAAGGAGCGGCGATGAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 90 bp | TCACTCGGCCTGTGTGCCAGGGCCTCGGAAGCAGGTGTATGTATGTaGGCACAGGAGACCTCTCAGCGGCAAGGCTGGCTGAGGGCAACT | + |
Preference number: 1 (lower is better) Translates to: SLGLCARASEAGVCM*AQETSQRQGWLRAT Trigger: AGTTGCCCTCAGCCAGCCTTGCCGCTGAGAGGTCTCCTGTGCGCACATACATACACCTGCTTCCGAGGCCCTGGCACACAGGCCGAGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 90 bp | AAAGGAAGCAAGCCGAACCCGCCCTGCCCTCTCACTCGGCCTGTGTaGCAGGGCCTCGGAAGCAGGTGTATGTATGTGCGCACAGGAGAC | + |
Preference number: 1 (lower is better) Translates to: KGSKPNPPCPLTRPV*QGLGSRCMYVRTGD Trigger: GTCTCCTGTGCGCACATACATACACCTGCTTCCGAGGCCCTGGCACACAGGCCGAGTGAGAGGGCAGGGCGGGTTCGGCTTGCTTCCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 90 bp | GTGGCAACCCCAGCTCTTGGGTTTCTCTCCTCCGTGCCAGAGCTATaGAAACCCATGGGGCTTCCCGTGGAAGGTGGAGCTACCCACCAG | + |
Preference number: 1 (lower is better) Translates to: VATPALGFLSSVPEL*KPMGLPVEGGATHQ Trigger: CTGGTGGGTAGCTCCACCTTCCACGGGAAGCCCCATGGGTTTGCATAGCTCTGGCACGGAGGAGAGAAACCCAAGAGCTGGGGTTGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 90 bp | GTCTGCCAGGCCTGGCAGTGTGGTAATTGTGCTCCACCGGCGTGGTaGGTGACTCCACAGGCCATCTCCAAGAAAAGCAAGGCTCCAGGG | + |
Preference number: 1 (lower is better) Translates to: VCQAWQCGNCAPPAW*VTPQAISKKSKAPG Trigger: CCCTGGAGCCTTGCTTTTCTTGGAGATGGCCTGTGGAGTCACCCACCACGCCGGTGGAGCACAATTACCACACTGCCAGGCCTGGCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR TCA 90 bp | GCCAGGCCTGGCAGTGTGGTAATTGTGCTCCACCGGCGTGGTGGGTaGCTCCACAGGCCATCTCCAAGAAAAGCAAGGCTCCAGGGTAGA | + |
Preference number: 1 (lower is better) Translates to: ARPGSVVIVLHRRGG*LHRPSPRKARLQGR Trigger: TCTACCCTGGAGCCTTGCTTTTCTTGGAGATGGCCTGTGGAGTCACCCACCACGCCGGTGGAGCACAATTACCACACTGCCAGGCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 90 bp | CAGCTCTTGGGTTTCTCTCCTCCGTGCCAGAGCTATGCAAACCCATaGGGCTTCCCGTGGAAGGTGGAGCTACCCACCAGGCAAAGGCAG | + |
Preference number: 1 (lower is better) Translates to: QLLGFSPPCQSYANP*GFPWKVELPTRQRQ Trigger: CTGCCTTTGCCTGGTGGGTAGCTCCACCTTCCACGGGAAGCCCCATGGGTTTGCATAGCTCTGGCACGGAGGAGAGAAACCCAAGAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 90 bp | ACGTGGTCTAGCCACACGGGTAGGTGGTGTGGCAACCCCAGCTCTTaGGTTTCTCTCCTCCGTGCCAGAGCTATGCAAACCCATGGGGCT | + |
Preference number: 1 (lower is better) Translates to: TWSSHTGRWCGNPSS*VSLLRARAMQTHGA Trigger: AGCCCCATGGGTTTGCATAGCTCTGGCACGGAGGAGAGAAACCCAAGAGCTGGGGTTGCCACACCACCTACCCGTGTGGCTAGACCACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 90 bp | TCACAGCTGAGGACGCTGAGGCCCAGCAAGCCATTGGGATGGGGTTaGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCCAGGAC | + |
Preference number: 1 (lower is better) Translates to: SQLRTLRPSKPLGWG*GFPASPSLPVKSQD Trigger: GTCCTGGCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGGCTTGCTGGGCCTCAGCGTCCTCAGCTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CCA 90 bp | CTCCGTGCCAGAGCTATGCAAACCCATGGGGCTTCCCGTGGAAGGTaGAGCTACCCACCAGGCAAAGGCAGTGATGTCAAGAGCCGAGAA | + |
Preference number: 1 (lower is better) Translates to: LRARAMQTHGASRGR*SYPPGKGSDVKSRE Trigger: TTCTCGGCTCTTGACATCACTGCCTTTGCCTGGTGGGTAGCTCCACCTTCCACGGGAAGCCCCATGGGTTTGCATAGCTCTGGCACGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 90 bp | AGTGTCTGCCAGGCCTGGCAGTGTGGTAATTGTGCTCCACCGGCGTaGTGGGTGACTCCACAGGCCATCTCCAAGAAAAGCAAGGCTCCA | + |
Preference number: 1 (lower is better) Translates to: SVCQAWQCGNCAPPA*WVTPQAISKKSKAP Trigger: TGGAGCCTTGCTTTTCTTGGAGATGGCCTGTGGAGTCACCCACCACGCCGGTGGAGCACAATTACCACACTGCCAGGCCTGGCAGACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR TCA 90 bp | ACAGAGTGGCCTCAGAGAGGAGTGACCCACCTAGACCACCCCCAATaGCCTCTGAGCCACAGCCATCTTCAGAGGACATCACGGCTTGGA | + |
Preference number: 1 (lower is better) Translates to: TEWPQRGVTHLDHPQ*PLSHSHLQRTSRLG Trigger: TCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGGCTCAGAGGTCATTGGGGGTGGTCTAGGTGGGTCACTCCTCTCTGAGGCCACTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR TCA 90 bp | GCCAGCCTTTGTACTGGAGACCGTGTTCTCGATGGCGACCAGAGTTaGCTGAGGCCACACTCAGCACGCCTGACCTTCACCATAAGCACT | + |
Preference number: 1 (lower is better) Translates to: ASLCTGDRVLDGDQS*LRPHSARLTFTIST Trigger: AGTGCTTATGGTGAAGGTCAGGCGTGCTGAGTGTGGCCTCAGTCAACTCTGGTCGCCATCGAGAACACGGTCTCCAGTACAAAGGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CCA 90 bp | CTTTCTTTCCTGGGCCAGCCTTTGTACTGGAGACCGTGTTCTCGATaGCGACCAGAGTTGACTGAGGCCACACTCAGCACGCCTGACCTT | + |
Preference number: 1 (lower is better) Translates to: LSFLGQPLYWRPCSR*RPELTEATLSTPDL Trigger: AAGGTCAGGCGTGCTGAGTGTGGCCTCAGTCAACTCTGGTCGCCATCGAGAACACGGTCTCCAGTACAAAGGCTGGCCCAGGAAAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR TCA 90 bp | CATTGGGATGGGGTTGGGGATTTCCAGCATCTCCCAGTTTGCCAGTaGAGAGCCAGGACTAGAATCTGGGACACTGGTTCCAGTTCCCTC | + |
Preference number: 1 (lower is better) Translates to: HWDGVGDFQHLPVCQ*RARTRIWDTGSSSL Trigger: GAGGGAACTGGAACCAGTGTCCCAGATTCTAGTCCTGGCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CCA 90 bp | GCTCCAGACAAGATTAGGGGTGGGAGAAATCCCCACACCATGGTCTaGGTCTTCTATGCCATCCGCTCCTTCTCTAGGACTGACCACCTA | + |
Preference number: 1 (lower is better) Translates to: APDKIRGGRNPHTMV*VFYAIRSFSRTDHL Trigger: TAGGTGGTCAGTCCTAGAGAAGGAGCGGATGGCATAGAAGACCCAGACCATGGTGTGGGGATTTCTCCCACCCCTAATCTTGTCTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 90 bp | CAAAGGCTCCAGACAAGATTAGGGGTGGGAGAAATCCCCACACCATaGTCTGGGTCTTCTATGCCATCCGCTCCTTCTCTAGGACTGACC | + |
Preference number: 1 (lower is better) Translates to: QRLQTRLGVGEIPTP*SGSSMPSAPSLGLT Trigger: GGTCAGTCCTAGAGAAGGAGCGGATGGCATAGAAGACCCAGACCATGGTGTGGGGATTTCTCCCACCCCTAATCTTGTCTGGAGCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR TCA 90 bp | ATCCTGGAGGAAGCTCAAGTTGCTCGCAAGGTTGTGGACTTGCCCTaGTGCCCAATGCTAACTGAGAGCACTTTAGCCGAGGCCAAGTCT | + |
Preference number: 1 (lower is better) Translates to: ILEEAQVARKVVDLP*CPMLTESTLAEAKS Trigger: AGACTTGGCCTCGGCTAAAGTGCTCTCAGTTAGCATTGGGCATCAGGGCAAGTCCACAACCTTGCGAGCAACTTGAGCTTCCTCCAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 90 bp | AGGACTAGAATCTGGGACACTGGTTCCAGTTCCCTCCTGGGTCCCTaGCAATCTCTTTTCCTACCAGCCTTTCAGGAGAGCCTCAAAGGA | + |
Preference number: 1 (lower is better) Translates to: RTRIWDTGSSSLLGP*QSLFLPAFQESLKG Trigger: TCCTTTGAGGCTCTCCTGAAAGGCTGGTAGGAAAAGAGATTGGCAGGGACCCAGGAGGGAACTGGAACCAGTGTCCCAGATTCTAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CCA 90 bp | CCAATGACCTCTGAGCCACAGCCATCTTCAGAGGACATCACGGCTTaGACACAGCCATCAGAGGAGCAGCAGGAAAGAAGTCACAAGTTC | + |
Preference number: 1 (lower is better) Translates to: PMTSEPQPSSEDITA*TQPSEEQQERSHKF Trigger: GAACTTGTGACTTCTTTCCTGCTGCTCCTCTGATGGCTGTGTCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGGCTCAGAGGTCATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CCA 90 bp | GCTGCCATCCACAGAATAGCTAGAGACCCCTACATGGTTTCTACGTaGTCAAGAGGTATATACACAATCCCTCAAAGGTCAGGATTGAGG | + |
Preference number: 1 (lower is better) Translates to: AAIHRIARDPYMVST*SRGIYTIPQRSGLR Trigger: CCTCAATCCTGACCTTTGAGGGATTGTGTATATACCTCTTGACCACGTAGAAACCATGTAGGGGTCTCTAGCTATTCTGTGGATGGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CCA 90 bp | TTTCTTTTCGCTCATAAAGATGGGAAGATTGGGGCTGTCGTTGGTTaGTTGGTTGGTTGGTTGGTTGGTTGGTTCGGTCAGGCACCAAAA | + |
Preference number: 1 (lower is better) Translates to: FLFAHKDGKIGAVVG*LVGWLVGWFGQAPK Trigger: TTTTGGTGCCTGACCGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCCCCAATCTTCCCATCTTTATGAGCGAAAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 90 bp | AGGAGGTGGGTTGAGAAGAGTAAGGGGCAAAGGACAGTTAAAGAATaGCAGGAGACCTGGTATTTTCTGCACACAACTAAGAGCTACACT | + |
Preference number: 1 (lower is better) Translates to: RRWVEKSKGQRTVKE*QETWYFLHTTKSYT Trigger: AGTGTAGCTCTTAGTTGTGTGCAGAAAATACCAGGTCTCCTGGCATTCTTTAACTGTCCTTTGCCCCTTACTCTTCTCAACCCACCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR TCA 90 bp | TGGTTGGTTGGTTGGTTCGGTCAGGCACCAAAACAAGAAACTCAATaGGAAATATTTGGTGCGAGTTCAGTAATAGCGACATGTCCACCA | + |
Preference number: 1 (lower is better) Translates to: WLVGWFGQAPKQETQ*EIFGASSVIATCPP Trigger: TGGTGGACATGTCGCTATTACTGAACTCGCACCAAATATTTCTCATTGAGTTTCTTGTTTTGGTGCCTGACCGAACCAACCAACCAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 90 bp | AGGGGCAAAGGACAGTTAAAGAATGCCAGGAGACCTGGTATTTTCTaGACACAACTAAGAGCTACACTCGAGTTAGAATTTGGCAGATTT | + |
Preference number: 1 (lower is better) Translates to: RGKGQLKNARRPGIF*TQLRATLELEFGRF Trigger: AAATCTGCCAAATTCTAACTCGAGTGTAGCTCTTAGTTGTGTGCAGAAAATACCAGGTCTCCTGGCATTCTTTAACTGTCCTTTGCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 90 bp | CCCAGCTGCCCTCTGCCTGTGCCCAGCTGGATTCGTGGCGTGGCGTaGATTGGTGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTA | + |
Preference number: 2 (lower is better) Translates to: PSCPLPVPSWIRGVA*IGVRGGPAAPWLRL Trigger: TAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACACCAATCAACGCCACGCCACGAATCCAGCTGGGCACAGGCAGAGGGCAGCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | ACCCTCGGCCTGGAAATGGGAGCTGCTCCAGGGCACAAGGACTCCAAGTACGTGCCAGTCCTCAGCAGCTaGGGCGCCCCCTTCCCGCCC | + |
Preference number: 2 (lower is better) Translates to: TLGLEMGAAPGHKDSKYVPVLSS*GAPFPP Trigger: GGGCGGGAAGGGGGCGCCCCAGCTGCTGAGGACTGG...CACGTACTTGGAGTCCTTGTGCCCTGGAGCAGCTCCCATTTCCAGGCCGAGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | AGGAGCTCTGCGGGAGGCAGTGTCTGCCAGGCCTGGCAGTGTGGTAATTGTGCTAGGTGGTGGCGAGGGTaGCCGGGGAGACTGGGGTCC | + |
Preference number: 2 (lower is better) Translates to: RSSAGGSVCQAWQCGNCARWWRG*PGRLGS Trigger: GGACCCCAGTCTCCCCGGTCACCCTCGCCACCACCT...AGCACAATTACCACACTGCCAGGCCTGGCAGACACTGCCTCCCGCAGAGCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR-3UTR GCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCACTCACTCGGCCTGTGTaGCAGGGCCTCGGAAGCAGG | + |
Preference number: 2 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSLTRPV*QGLGSR Trigger: CCTGCTTCCGAGGCCCTGGCACACAGGCCGAGTGAG...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCAAGACGGGGCCTGGGATaGGGCAGGCAGCCATTCCTT | + |
Preference number: 2 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSRRGLG*GRQPFL Trigger: AAGGAATGGCTGCCTGCCTCATCCCAGGCCCCGTCT...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCACCAGAAGACGGGGCCTaGGATGAGGCAGGCAGCCAT | + |
Preference number: 2 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSPEDGA*DEAGSH Trigger: ATGGCTGCCTGCCTCATCCCAGGCCCCGTCTTCTGG...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CACTCGGCCTGTGTGCCAGGGCCTCGGAAGCAGGTGTATGTATGTGCGCACAGGAGACGGGGCCTGGGATaGGGCAGGCAGCCATTCCTT | + |
Preference number: 2 (lower is better) Translates to: HSACVPGPRKQVYVCAHRRRGLG*GRQPFL Trigger: AAGGAATGGCTGCCTGCCTCATCCCAGGCCCCGTCT...CCTGTGCGCACATACATACACCTGCTTCCGAGGCCCTGGCACACAGGCCGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | AGGAGCTCTGCGGGAGGCAGTGTCTGCCAGGCCTGGCAGTGTGGTAATTGTGCTCACCGGCGTGGTGGGTaGCTCCACAGGCCATCTCCA | + |
Preference number: 2 (lower is better) Translates to: RSSAGGSVCQAWQCGNCAHRRGG*LHRPSP Trigger: TGGAGATGGCCTGTGGAGTCACCCACCACGCCGGTG...AGCACAATTACCACACTGCCAGGCCTGGCAGACACTGCCTCCCGCAGAGCTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR-3UTR GCA 90 bp | ACCCTCGGCCTGGAAATGGGAGCTGCTCCAGGGCACAAGGACTCCAAGTACGTGCTCACTCGGCCTGTGTaGCAGGGCCTCGGAAGCAGG | + |
Preference number: 2 (lower is better) Translates to: TLGLEMGAAPGHKDSKYVLTRPV*QGLGSR Trigger: CCTGCTTCCGAGGCCCTGGCACACAGGCCGAGTGAG...CACGTACTTGGAGTCCTTGTGCCCTGGAGCAGCTCCCATTTCCAGGCCGAGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | ACCCTCGGCCTGGAAATGGGAGCTGCTCCAGGGCACAAGGACTCCAAGTACGTGCATGGGCCTGAGGACTaGGGAGCCCACTGCAAGGTG | + |
Preference number: 2 (lower is better) Translates to: TLGLEMGAAPGHKDSKYVHGPED*GAHCKV Trigger: CACCTTGCAGTGGGCTCCTCAGTCCTCAGGCCCATG...CACGTACTTGGAGTCCTTGTGCCCTGGAGCAGCTCCCATTTCCAGGCCGAGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCAACCCCCAATGACCTCTaGGCCACAGCCATCTTCAGA | + |
Preference number: 2 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSTPNDL*ATAIFR Trigger: TCTGAAGATGGCTGTGGCTCAGAGGTCATTGGGGGT...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCATGGATATGGTGGATGTaGGATGCTGAGGCCTGGACC | + |
Preference number: 2 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSWIWWM*DAEAWT Trigger: GGTCCAGGCCTCAGCATCTCACATCCACCATATCCA...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR GCA 90 bp | CCACAGCCATCTTCAGAGGACATCACGGCTTGGACACAGCCATCAGAGGAGCAGGGAGTGAGCAGGGGCTaGTGGCTCCCAGGAACACGC | + |
Preference number: 2 (lower is better) Translates to: PQPSSEDITAWTQPSEEQGVSRG*WLPGTR Trigger: GCGTGTTCCTGGGAGCCAGCAGCCCCTGCTCACTCC...CTGCTCCTCTGATGGCTGTGTCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | TGTAGCTGGAGGCATTGTCCTCCCTGGTTCAGTGTGGAACCTAGGAAAGCTACTCCAGTCCTCAGCAGCTaGGGCGCCCCCTTCCCGCCC | + |
Preference number: 2 (lower is better) Translates to: CSWRHCPPWFSVEPRKATPVLSS*GAPFPP Trigger: GGGCGGGAAGGGGGCGCCCCAGCTGCTGAGGACTGG...AGTAGCTTTCCTAGGTTCCACACTGAACCAGGGAGGACAATGCCTCCAGCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCAGCAGTGCAAATGAGGTaGGGGAGAAGAAGTGGAGGG | + |
Preference number: 2 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSAVQMR*GRRSGG Trigger: CCCTCCACTTCTTCTCCCCCACCTCATTTGCACTGC...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCGGGGTCCTTGGCAGGTaGAGGAACAACGTGCAGCCC | + |
Preference number: 2 (lower is better) Translates to: YARAGDETQGGPDRRCYSGVLGR*RNNVQP Trigger: GGGCTGCACGTTGTTCCTCCACCTGCCAAGGACCCC...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR TCA 90 bp | CACTCGGCCTGTGTGCCAGGGCCTCGGAAGCAGGTGTATGTATGTGCGCACAGGCTCAAAGGTCAGGATTaGGGGGCCGATCACCAGCTA | + |
Preference number: 2 (lower is better) Translates to: HSACVPGPRKQVYVCAHRLKGQD*GADHQL Trigger: TAGCTGGTGATCGGCCCCTCAATCCTGACCTTTGAG...CCTGTGCGCACATACATACACCTGCTTCCGAGGCCCTGGCACACAGGCCGAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR TCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCAGTTGTGGACTTGCCCTaGTGCCCAATGCTAACTGAG | + |
Preference number: 2 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSVVDLP*CPMLTE Trigger: CTCAGTTAGCATTGGGCATCAGGGCAAGTCCACAAC...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR TCA 90 bp | AGGAGCTCTGCGGGAGGCAGTGTCTGCCAGGCCTGGCAGTGTGGTAATTGTGCTGTGGATGTGAGATGCTaGGGCCTGGACCTGCCTCAT | + |
Preference number: 2 (lower is better) Translates to: RSSAGGSVCQAWQCGNCAVDVRC*GLDLPH Trigger: ATGAGGCAGGTCCAGGCCTCAGCATCTCACATCCAC...AGCACAATTACCACACTGCCAGGCCTGGCAGACACTGCCTCCCGCAGAGCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR-3UTR GCA 90 bp | AAAGAGTTTAAGAATGCTTGCACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCTGGAGTGAGCAGGGGCTaGTGGCTCCCAGGAACACGC | + |
Preference number: 2 (lower is better) Translates to: KEFKNACTEAGGLCGRGAGVSRG*WLPGTR Trigger: GCGTGTTCCTGGGAGCCAGCAGCCCCTGCTCACTCC...AGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTTAAACTCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CAA 90 bp | GTCACAGCTGAGGACGCTGAGGCCCAGCAAGCCATTGGGATGGGGTaGGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCCAGGA | + |
Preference number: 2 (lower is better) Translates to: VTAEDAEAQQAIGMG*GISSISQFASEEPG Trigger: TCCTGGCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGGCTTGCTGGGCCTCAGCGTCCTCAGCTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR TCA 90 bp | AAAGAGTTTAAGAATGCTTGCACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCTCATGGGCCTGAGGACTaGGGAGCCCACTGCAAGGTG | + |
Preference number: 2 (lower is better) Translates to: KEFKNACTEAGGLCGRGAHGPED*GAHCKV Trigger: CACCTTGCAGTGGGCTCCTCAGTCCTCAGGCCCATG...AGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTTAAACTCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR TCA 90 bp | CCATTGGGATGGGGTTGGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCGCTAAGCCATGGGCCTaGGGACTGAGGAGCCCACTG | + |
Preference number: 2 (lower is better) Translates to: PLGWGWGFPASPSLPVKSAKPWA*GLRSPL Trigger: CAGTGGGCTCCTCAGTCCTCAGGCCCATGGCTTAGC...GCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | AGGAGCTCTGCGGGAGGCAGTGTCTGCCAGGCCTGGCAGTGTGGTAATTGTGCTCCTCAGAGACTCCCCTaGGAGAACCGAAAGCACATC | + |
Preference number: 2 (lower is better) Translates to: RSSAGGSVCQAWQCGNCAPQRLP*ENRKHI Trigger: GATGTGCTTTCGGTTCTCTCAGGGGAGTCTCTGAGG...AGCACAATTACCACACTGCCAGGCCTGGCAGACACTGCCTCCCGCAGAGCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR-3UTR TCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGCCTCAGAGACTCCCCTaGGAGAACCGAAAGCACATC | + |
Preference number: 2 (lower is better) Translates to: AGDETQGGPDRRCYSPTRPQRLP*ENRKHI Trigger: GATGTGCTTTCGGTTCTCTCAGGGGAGTCTCTGAGG...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR GCA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCTTCCTCAACACCTGCTaGCCCCCTACCCCAATAGGC | + |
Preference number: 2 (lower is better) Translates to: YARAGDETQGGPDRRCYSFLNTC*PPTPIG Trigger: GCCTATTGGGGTAGGGGGGCAGCAGGTGTTGAGGAA...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGGGTTGGTTGGTTGGTTaGTTGGTTCGGTCAGGCACC | + |
Preference number: 2 (lower is better) Translates to: AGDETQGGPDRRCYSPTRGWLVG*LVRSGT Trigger: GGTGCCTGACCGAACCAACCAACCAACCAACCAACC...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | AAAGAGTTTAAGAATGCTTGCACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCTAACCCCCTCACTGGCTaGGGTTCTGCCCTCCTCACC | + |
Preference number: 2 (lower is better) Translates to: KEFKNACTEAGGLCGRGANPLTG*GSALLT Trigger: GGTGAGGAGGGCAGAACCCCAGCCAGTGAGGGGGTT...AGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTTAAACTCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCACTCCCTGGTTCAGTGTaGAACCTAGGAAAGCTACTG | + |
Preference number: 2 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSLPGSV*NLGKLL Trigger: CAGTAGCTTTCCTAGGTTCCACACTGAACCAGGGAG...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCACCTGACTTTCTTTCCTaGGCCAGCCTTTGTACTGGA | + |
Preference number: 2 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSPDFLS*ASLCTG Trigger: TCCAGTACAAAGGCTGGCCCAGGAAAGAAAGTCAGG...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGACTGGGCAGAGGCACTaGCTTTTCTCCACCCAATCG | + |
Preference number: 2 (lower is better) Translates to: AGDETQGGPDRRCYSPTRTGQRH*LFSTQS Trigger: CGATTGGGTGGAGAAAAGCCAGTGCCTCTGCCCAGT...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGGTTGTGGACTTGCCCTaGTGCCCAATGCTAACTGAG | + |
Preference number: 2 (lower is better) Translates to: AGDETQGGPDRRCYSPTRVVDLP*CPMLTE Trigger: CTCAGTTAGCATTGGGCATCAGGGCAAGTCCACAAC...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR TCA 90 bp | CCACAGCCATCTTCAGAGGACATCACGGCTTGGACACAGCCATCAGAGGAGCAGGGCCGAGACATCGCCTaGGTGATCACCTTCCTCAAC | + |
Preference number: 2 (lower is better) Translates to: PQPSSEDITAWTQPSEEQGRDIA*VITFLN Trigger: GTTGAGGAAGGTGATCACTCAGGCGATGTCTCGGCC...CTGCTCCTCTGATGGCTGTGTCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGCTCCCAGTTTGCCAGTaGAGAGCCAGGACTAGAATC | + |
Preference number: 2 (lower is better) Translates to: AGDETQGGPDRRCYSPTRLPVCQ*RARTRI Trigger: GATTCTAGTCCTGGCTCTTCACTGGCAAACTGGGAG...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR GCA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCAAGGCAAAGTTTGGCTaGAAGGGCTATGGCCGTGGG | + |
Preference number: 2 (lower is better) Translates to: YARAGDETQGGPDRRCYSKAKFG*KGYGRG Trigger: CCCACGGCCATAGCCCTTGCAGCCAAACTTTGCCTT...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR GCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGGCAGGTGTATGTATGTaGGCACAGGAGACCTCTCAG | + |
Preference number: 2 (lower is better) Translates to: AGDETQGGPDRRCYSPTRAGVCM*AQETSQ Trigger: CTGAGAGGTCTCCTGTGCGCACATACATACACCTGC...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CCCTACCCCAATAGGCAGTCCACAGAGATTGAAGGACACACCAGAAGACGGGGCCATGTCCACCACAGATaGCGAGAGCACCACACACGA | + |
Preference number: 2 (lower is better) Translates to: PYPNRQSTEIEGHTRRRGHVHHR*REHHTR Trigger: TCGTGTGTGGTGCTCTCGTCATCTGTGGTGGACATG...GCCCCGTCTTCTGGTGTGTCCTTCAATCTCTGTGGACTGCCTATTGGGGTAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CCCAATAGGCAGTCCACAGAGATTGAAGGACACACCAGAAGACGGGGCCTGGGACCTCCTCACCTTGCCTaGAAGCCTCAGAAACCCAGT | + |
Preference number: 2 (lower is better) Translates to: PNRQSTEIEGHTRRRGLGPPHLA*KPQKPS Trigger: ACTGGGTTTCTGAGGCTTTCAGGCAAGGTGAGGAGG...TCCCAGGCCCCGTCTTCTGGTGTGTCCTTCAATCTCTGTGGACTGCCTATTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CCACAGCCATCTTCAGAGGACATCACGGCTTGGACACAGCCATCAGAGGAGCAGCGAGAGCAGTGCAAATaGGGTGGGGGAGAAGAAGTG | + |
Preference number: 2 (lower is better) Translates to: PQPSSEDITAWTQPSEEQREQCK*GGGEEV Trigger: CACTTCTTCTCCCCCACCTCATTTGCACTGCTCTCG...CTGCTCCTCTGATGGCTGTGTCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGAGCTTTCTAACACCCTaGCTTTCTTTCCTGGGCCAG | + |
Preference number: 2 (lower is better) Translates to: AGDETQGGPDRRCYSPTRSFLTP*LSFLGQ Trigger: CTGGCCCAGGAAAGAAAGTCAGGGTGTTAGAAAGCT...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CAGCTGCACAGCAAGGCGATGAGGCAGTCACCATTCCTGATGGGTGGGTCTTCCTCAGAAGGCAAAGTTTaGCTGCAAGGGCTATGGCCG | + |
Preference number: 2 (lower is better) Translates to: QLHSKAMRQSPFLMGGSSSEGKV*LQGLWP Trigger: CGGCCATAGCCCTTGCAGCCAAACTTTGCCTTCTGA...GGAAGACCCACCCATCAGGAATGGTGACTGCCTCATCGCCTTGCTGTGCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CCATTGGGATGGGGTTGGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCACCATTCCTGATGGGTaGGTCTTCCCACCCTACCCC | + |
Preference number: 2 (lower is better) Translates to: PLGWGWGFPASPSLPVKSTIPDG*VFPPYP Trigger: GGGGTAGGGTGGGAAGACCCACCCATCAGGAATGGT...GCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCAGCAAGCCATTGGGATaGGGTTGGGGATTTCCAGCA | + |
Preference number: 2 (lower is better) Translates to: YARAGDETQGGPDRRCYSSKPLG*GWGFPA Trigger: TGCTGGAAATCCCCAACCCCATCCCAATGGCTTGCT...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CTGCGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAACCCTCGGCCTGGAAATaGGAGCTGCTCCAGGGCACA | + |
Preference number: 2 (lower is better) Translates to: LRLGGPTCQRHSCVSVRKPSAWK*ELLQGT Trigger: TGTGCCCTGGAGCAGCTCCCATTTCCAGGCCGAGGG...TTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGGAAGGAGACGGAAACTaGGGCACAGAGAAAGAAAAG | + |
Preference number: 2 (lower is better) Translates to: AGDETQGGPDRRCYSPTREGDGN*GTEKEK Trigger: CTTTTCTTTCTCTGTGCCTCAGTTTCCGTCTCCTTC...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCAGCTTTCTAACACCCTaGCTTTCTTTCCTGGGCCAG | + |
Preference number: 2 (lower is better) Translates to: YARAGDETQGGPDRRCYSSFLTP*LSFLGQ Trigger: CTGGCCCAGGAAAGAAAGTCAGGGTGTTAGAAAGCT...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR GCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGTGTCAAAGGCACTCATaGGTCTCAGTCAGAAAAGGG | + |
Preference number: 2 (lower is better) Translates to: AGDETQGGPDRRCYSPTRCQRHS*VSVRKG Trigger: CCCTTTTCTGACTGAGACGCATGAGTGCCTTTGACA...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CACTCGGCCTGTGTGCCAGGGCCTCGGAAGCAGGTGTATGTATGTGCGCACAGGTACATTGCCTCTTTGTaGCAAGATGAGAGCTCAGGA | + |
Preference number: 2 (lower is better) Translates to: HSACVPGPRKQVYVCAHRYIASL*QDESSG Trigger: TCCTGAGCTCTCATCTTGCCACAAAGAGGCAATGTA...CCTGTGCGCACATACATACACCTGCTTCCGAGGCCCTGGCACACAGGCCGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCGTTCTTTCTCCCCACTaGAAGGAGACGGAAACTGAG | + |
Preference number: 2 (lower is better) Translates to: YARAGDETQGGPDRRCYSVLSPH*KETETE Trigger: CTCAGTTTCCGTCTCCTTCCAGTGGGGAGAAAGAAC...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAGGGCATGTCCACCACAGATaGCGAGAGCACCACACACGA | + |
Preference number: 2 (lower is better) Translates to: RLGGPTCQRHSCVSVRKGHVHHR*REHHTR Trigger: TCGTGTGTGGTGCTCTCGTCATCTGTGGTGGACATG...CCCTTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR GCA 90 bp | CGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAGGGAAGGCAAAGTTTGGCTaGAAGGGCTATGGCCGTGGG | + |
Preference number: 2 (lower is better) Translates to: RLGGPTCQRHSCVSVRKGKAKFG*KGYGRG Trigger: CCCACGGCCATAGCCCTTGCAGCCAAACTTTGCCTT...CCCTTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CCCTACCCCAATAGGCAGTCCACAGAGATTGAAGGACACACCAGAAGACGGGGCGTTCTTTCTCCCCACTaGAAGGAGACGGAAACTGAG | + |
Preference number: 2 (lower is better) Translates to: PYPNRQSTEIEGHTRRRGVLSPH*KETETE Trigger: CTCAGTTTCCGTCTCCTTCCAGTGGGGAGAAAGAAC...GCCCCGTCTTCTGGTGTGTCCTTCAATCTCTGTGGACTGCCTATTGGGGTAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CCCTACCCCAATAGGCAGTCCACAGAGATTGAAGGACACACCAGAAGACGGGGCGCCATTCCTTCACGATaGTTGTCCTGGAAGGATCTC | + |
Preference number: 2 (lower is better) Translates to: PYPNRQSTEIEGHTRRRGAIPSR*LSWKDL Trigger: GAGATCCTTCCAGGACAACCATCGTGAAGGAATGGC...GCCCCGTCTTCTGGTGTGTCCTTCAATCTCTGTGGACTGCCTATTGGGGTAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAGGGGAGACATCGCCTGAGTaGTCACCTTCCTCAACACCT | + |
Preference number: 2 (lower is better) Translates to: RLGGPTCQRHSCVSVRKGETSPE*SPSSTP Trigger: AGGTGTTGAGGAAGGTGATCACTCAGGCGATGTCTC...CCCTTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CTGCGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAACCCCCAATGACCTCTaGGCCACAGCCATCTTCAGA | + |
Preference number: 2 (lower is better) Translates to: LRLGGPTCQRHSCVSVRKTPNDL*ATAIFR Trigger: TCTGAAGATGGCTGTGGCTCAGAGGTCATTGGGGGT...TTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | GCGGTACAGAAAGCATACACTAATACTGTGTCACTTGGGACTTTCCGTCTCCTTAACCCCCTCACTGGCTaGGGTTCTGCCCTCCTCACC | + |
Preference number: 2 (lower is better) Translates to: AVQKAYTNTVSLGTFRLLNPLTG*GSALLT Trigger: GGTGAGGAGGGCAGAACCCCAGCCAGTGAGGGGGTT...AAGGAGACGGAAAGTCCCAAGTGACACAGTATTAGTGTATGCTTTCTGTACCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | AAAGAGTTTAAGAATGCTTGCACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCTTGCATAGGGAGGCAGTaGCTACATTGCCTCTTTGTG | + |
Preference number: 2 (lower is better) Translates to: KEFKNACTEAGGLCGRGACIGRQ*LHCLFV Trigger: CACAAAGAGGCAATGTAGCCACTGCCTCCCTATGCA...AGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTTAAACTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CCATCAGAGGAGCAGCAGGAAAGAAGTCACAAGTTCTTGTGGCTTTTGGTCGGCGCAGTGCAAATGAGGTaGGGGAGAAGAAGTGGAGGG | + |
Preference number: 2 (lower is better) Translates to: PSEEQQERSHKFLWLLVGAVQMR*GRRSGG Trigger: CCCTCCACTTCTTCTCCCCCACCTCATTTGCACTGC...GCCGACCAAAAGCCACAAGAACTTGTGACTTCTTTCCTGCTGCTCCTCTGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CCA 90 bp | CCATTGGGATGGGGTTGGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCAAGGAAAGAACAGAGTaGCCTCAGAGAGGAGTGACC | + |
Preference number: 2 (lower is better) Translates to: PLGWGWGFPASPSLPVKSKERTE*PQRGVT Trigger: GGTCACTCCTCTCTGAGGCCACTCTGTTCTTTCCTT...GCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CCATTGGGATGGGGTTGGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCGAAGGAGACGGAAACTaGGGCACAGAGAAAGAAAAG | + |
Preference number: 2 (lower is better) Translates to: PLGWGWGFPASPSLPVKSEGDGN*GTEKEK Trigger: CTTTTCTTTCTCTGTGCCTCAGTTTCCGTCTCCTTC...GCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR TCA 90 bp | AAAGAGTTTAAGAATGCTTGCACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCTTACCATTTCCTGCTCTaGGCATACGAGGACACTAAG | + |
Preference number: 2 (lower is better) Translates to: KEFKNACTEAGGLCGRGAYHFLL*AYEDTK Trigger: CTTAGTGTCCTCGTATGCTCAGAGCAGGAAATGGTA...AGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTTAAACTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CTGCGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAACTCCCAGTTTGCCAGTaGAGAGCCAGGACTAGAATC | + |
Preference number: 2 (lower is better) Translates to: LRLGGPTCQRHSCVSVRKLPVCQ*RARTRI Trigger: GATTCTAGTCCTGGCTCTTCACTGGCAAACTGGGAG...TTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | AGGAGCTCTGCGGGAGGCAGTGTCTGCCAGGCCTGGCAGTGTGGTAATTGTGCTCTTTTTCTTCACCGTTaGAAAAACTGTGCTTGTTCG | + |
Preference number: 2 (lower is better) Translates to: RSSAGGSVCQAWQCGNCALFLHR*KNCACS Trigger: CGAACAAGCACAGTTTTTTCAACGGTGAAGAAAAAG...AGCACAATTACCACACTGCCAGGCCTGGCAGACACTGCCTCCCGCAGAGCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR-3UTR GCA 90 bp | CTGCGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAATCCCTCCTGGGTCCCTaGCAATCTCTTTTCCTACCA | + |
Preference number: 2 (lower is better) Translates to: LRLGGPTCQRHSCVSVRKSLLGP*QSLFLP Trigger: TGGTAGGAAAAGAGATTGGCAGGGACCCAGGAGGGA...TTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR GCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGGGAAAACAAGTCTGGTaGTTTTTCTTCACCGTTGAA | + |
Preference number: 2 (lower is better) Translates to: AGDETQGGPDRRCYSPTRGKQVW*FFFTVE Trigger: TTCAACGGTGAAGAAAAAGCACCAGACTTGTTTTCC...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CTGCGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAATCAGAAGGCAAAGTTTaGCTGCAAGGGCTATGGCCG | + |
Preference number: 2 (lower is better) Translates to: LRLGGPTCQRHSCVSVRKSEGKV*LQGLWP Trigger: CGGCCATAGCCCTTGCAGCCAAACTTTGCCTTCTGA...TTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CCA 90 bp | CCATTGGGATGGGGTTGGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCCTAGAGACCCCTACATaGTTTCTACGTGGTCAAGAG | + |
Preference number: 2 (lower is better) Translates to: PLGWGWGFPASPSLPVKSLETPT*FLRGQE Trigger: CTCTTGACCACGTAGAAACCATGTAGGGGTCTCTAG...GCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | AAAGAGTTTAAGAATGCTTGCACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCTTCACGATGGTTGTCCTaGAAGGATCTCTCTCAAGTC | + |
Preference number: 2 (lower is better) Translates to: KEFKNACTEAGGLCGRGASRWLS*KDLSQV Trigger: GACTTGAGAGAGATCCTTCCAGGACAACCATCGTGA...AGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTTAAACTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CCCAATAGGCAGTCCACAGAGATTGAAGGACACACCAGAAGACGGGGCCTGGGACGATGCTGTGCCGTCTaGTTCATCTGGTTAATATTT | + |
Preference number: 2 (lower is better) Translates to: PNRQSTEIEGHTRRRGLGRCCAV*FIWLIF Trigger: AAATATTAACCAGATGAATCAGACGGCACAGCATCG...TCCCAGGCCCCGTCTTCTGGTGTGTCCTTCAATCTCTGTGGACTGCCTATTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR GCA 90 bp | ACCCTCGGCCTGGAAATGGGAGCTGCTCCAGGGCACAAGGACTCCAAGTACGTGATGAGAAATATTTGGTaGGAGTTCAGTAATAGCGAC | + |
Preference number: 2 (lower is better) Translates to: TLGLEMGAAPGHKDSKYVMRNIW*EFSNSD Trigger: GTCGCTATTACTGAACTCGCACCAAATATTTCTCAT...CACGTACTTGGAGTCCTTGTGCCCTGGAGCAGCTCCCATTTCCAGGCCGAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CCATCAGAGGAGCAGCAGGAAAGAAGTCACAAGTTCTTGTGGCTTTTGGTCGGCCTCCCTGGTTCAGTGTaGAACCTAGGAAAGCTACTG | + |
Preference number: 2 (lower is better) Translates to: PSEEQQERSHKFLWLLVGLPGSV*NLGKLL Trigger: CAGTAGCTTTCCTAGGTTCCACACTGAACCAGGGAG...GCCGACCAAAAGCCACAAGAACTTGTGACTTCTTTCCTGCTGCTCCTCTGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | GCGGTACAGAAAGCATACACTAATACTGTGTCACTTGGGACTTTCCGTCTCCTTCTCAAAGGTCAGGATTaGGGGGCCGATCACCAGCTA | + |
Preference number: 2 (lower is better) Translates to: AVQKAYTNTVSLGTFRLLLKGQD*GADHQL Trigger: TAGCTGGTGATCGGCCCCTCAATCCTGACCTTTGAG...AAGGAGACGGAAAGTCCCAAGTGACACAGTATTAGTGTATGCTTTCTGTACCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | AAAGAGTTTAAGAATGCTTGCACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCTCGATGCTGTGCCGTCTaGTTCATCTGGTTAATATTT | + |
Preference number: 2 (lower is better) Translates to: KEFKNACTEAGGLCGRGARCCAV*FIWLIF Trigger: AAATATTAACCAGATGAATCAGACGGCACAGCATCG...AGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTTAAACTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CCAGGTCCTAATGTTAGCCTGGAGCGTTCAAAGAGCCTGAACAAAAAGGAAGCAGAGACATCGCCTGAGTaGTCACCTTCCTCAACACCT | + |
Preference number: 2 (lower is better) Translates to: PGPNVSLERSKSLNKKEAETSPE*SPSSTP Trigger: AGGTGTTGAGGAAGGTGATCACTCAGGCGATGTCTC...TGCTTCCTTTTTGTTCAGGCTCTTTGAACGCTCCAGGCTAACATTAGGACCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | TGTAGCTGGAGGCATTGTCCTCCCTGGTTCAGTGTGGAACCTAGGAAAGCTACTCTAGAGACCCCTACATaGTTTCTACGTGGTCAAGAG | + |
Preference number: 2 (lower is better) Translates to: CSWRHCPPWFSVEPRKATLETPT*FLRGQE Trigger: CTCTTGACCACGTAGAAACCATGTAGGGGTCTCTAG...AGTAGCTTTCCTAGGTTCCACACTGAACCAGGGAGGACAATGCCTCCAGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CCATCAGAGGAGCAGCAGGAAAGAAGTCACAAGTTCTTGTGGCTTTTGGTCGGCAAAGCACATCAGGGCTaGAGGGTGTTAACTCTCAGA | + |
Preference number: 2 (lower is better) Translates to: PSEEQQERSHKFLWLLVGKAHQG*RVLTLR Trigger: TCTGAGAGTTAACACCCTCCAGCCCTGATGTGCTTT...GCCGACCAAAAGCCACAAGAACTTGTGACTTCTTTCCTGCTGCTCCTCTGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CTGCGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAAAAGCACATCAGGGCTaGAGGGTGTTAACTCTCAGA | + |
Preference number: 2 (lower is better) Translates to: LRLGGPTCQRHSCVSVRKKAHQG*RVLTLR Trigger: TCTGAGAGTTAACACCCTCCAGCCCTGATGTGCTTT...TTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCGCAG 50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 90 bp | TCTACGTGGTCAAGAGGTATATACACAATCCCTCAAAGGTCAGGATaGAGGGGCCGATCACCAGCTAGTACCCTCGAGATAACATCCAGT | + |
Preference number: 2 (lower is better) Translates to: STWSRGIYTIPQRSG*RGRSPASTLEITSS Trigger: ACTGGATGTTATCTCGAGGGTACTAGCTGGTGATCGGCCCCTCAATCCTGACCTTTGAGGGATTGTGTATATACCTCTTGACCACGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | GTTTGTTTGTTTCGCAGTTGTCATCGTACCAACGCATGCAAAGCATTCCACTCCATGCCCAATGCTAACTaGGAGCACTTTAGCCGAGGC | + |
Preference number: 2 (lower is better) Translates to: VCLFRSCHRTNACKAFHSMPNAN*EHFSRG Trigger: GCCTCGGCTAAAGTGCTCTCAGTTAGCATTGGGCAT...GGAGTGGAATGCTTTGCATGCGTTGGTACGATGACAACTGCGAAACAAACAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR-3UTR TCA 90 bp | GTTTGTTTGTTTCGCAGTTGTCATCGTACCAACGCATGCAAAGCATTCCACTCCGCAGTCCACAGAGATTaGAGGACACACCAGAAGACG | + |
Preference number: 2 (lower is better) Translates to: VCLFRSCHRTNACKAFHSAVHRD*RTHQKT Trigger: CGTCTTCTGGTGTGTCCTTCAATCTCTGTGGACTGC...GGAGTGGAATGCTTTGCATGCGTTGGTACGATGACAACTGCGAAACAAACAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR-3UTR GCA 90 bp | AAAGAGTTTAAGAATGCTTGCACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCTAGGACAGTTAAAGAATaGCAGGAGACCTGGTATTTT | + |
Preference number: 2 (lower is better) Translates to: KEFKNACTEAGGLCGRGARTVKE*QETWYF Trigger: AAAATACCAGGTCTCCTGGCATTCTTTAACTGTCCT...AGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTTAAACTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CCAGGTCCTAATGTTAGCCTGGAGCGTTCAAAGAGCCTGAACAAAAAGGAAGCAGGTTGGTTGGTTGGTTaGTTCGGTCAGGCACCAAAA | + |
Preference number: 2 (lower is better) Translates to: PGPNVSLERSKSLNKKEAGWLVG*FGQAPK Trigger: TTTTGGTGCCTGACCGAACCAACCAACCAACCAACC...TGCTTCCTTTTTGTTCAGGCTCTTTGAACGCTCCAGGCTAACATTAGGACCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR GCA 90 bp | CCATCAGAGGAGCAGCAGGAAAGAAGTCACAAGTTCTTGTGGCTTTTGGTCGGCCCCTCTTACACTCCGTaGACTGTAAACATGAGAAAA | + |
Preference number: 2 (lower is better) Translates to: PSEEQQERSHKFLWLLVGPSYTP*TVNMRK Trigger: TTTTCTCATGTTTACAGTGCACGGAGTGTAAGAGGG...GCCGACCAAAAGCCACAAGAACTTGTGACTTCTTTCCTGCTGCTCCTCTGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CCAGGTCCTAATGTTAGCCTGGAGCGTTCAAAGAGCCTGAACAAAAAGGAAGCATCACGATGGTTGTCCTaGAAGGATCTCTCTCAAGTC | + |
Preference number: 2 (lower is better) Translates to: PGPNVSLERSKSLNKKEASRWLS*KDLSQV Trigger: GACTTGAGAGAGATCCTTCCAGGACAACCATCGTGA...TGCTTCCTTTTTGTTCAGGCTCTTTGAACGCTCCAGGCTAACATTAGGACCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 90 bp | GTGCTGGGGAGAAAGCAGGATATAATTCTGCTGCTCCCCAAGTTCTaGTCAATGACTGGTATCCTAACCACAAAGGCTCCAGACAAGATT | + |
Preference number: 2 (lower is better) Translates to: VLGRKQDIILLLPKF*SMTGILTTKAPDKI Trigger: AATCTTGTCTGGAGCCTTTGTGGTTAGGATACCAGTCATTGACAAGAACTTGGGGAGCAGCAGAATTATATCCTGCTTTCTCCCCAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR-3UTR GCA 90 bp | CCATCAGAGGAGCAGCAGGAAAGAAGTCACAAGTTCTTGTGGCTTTTGGTCGGCAGACCTGGTATTTTCTaGACACAACTAAGAGCTACA | + |
Preference number: 2 (lower is better) Translates to: PSEEQQERSHKFLWLLVGRPGIF*TQLRAT Trigger: TGTAGCTCTTAGTTGTGTGCAGAAAATACCAGGTCT...GCCGACCAAAAGCCACAAGAACTTGTGACTTCTTTCCTGCTGCTCCTCTGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | GCGGTACAGAAAGCATACACTAATACTGTGTCACTTGGGACTTTCCGTCTCCTTAATCAAGCAGGATCCTaGAGGAAGCTCAAGTTGCTC | + |
Preference number: 2 (lower is better) Translates to: AVQKAYTNTVSLGTFRLLNQAGS*RKLKLL Trigger: GAGCAACTTGAGCTTCCTCCAGGATCCTGCTTGATT...AAGGAGACGGAAAGTCCCAAGTGACACAGTATTAGTGTATGCTTTCTGTACCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 90 bp | GAAGATTGGGGCTGTCGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTaGGTTCGGTCAGGCACCAAAACAAGAAACTCAATGAGAAATATT | + |
Preference number: 2 (lower is better) Translates to: EDWGCRWLVGWLVGW*VRSGTKTRNSMRNI Trigger: AATATTTCTCATTGAGTTTCTTGTTTTGGTGCCTGACCGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCCCCAATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CCAGGTCCTAATGTTAGCCTGGAGCGTTCAAAGAGCCTGAACAAAAAGGAAGCACTTCTCTACGTCAAATaGCTCAGAAGGCAAAGTTTG | + |
Preference number: 2 (lower is better) Translates to: PGPNVSLERSKSLNKKEALLYVK*LRRQSL Trigger: CAAACTTTGCCTTCTGAGCCATTTGACGTAGAGAAG...TGCTTCCTTTTTGTTCAGGCTCTTTGAACGCTCCAGGCTAACATTAGGACCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAGGGTCAATGAGAAATATTTaGTGCGAGTTCAGTAATAGC | + |
Preference number: 2 (lower is better) Translates to: RLGGPTCQRHSCVSVRKGSMRNI*CEFSNS Trigger: GCTATTACTGAACTCGCACCAAATATTTCTCATTGA...CCCTTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | GCGGTACAGAAAGCATACACTAATACTGTGTCACTTGGGACTTTCCGTCTCCTTCTTCTCTACGTCAAATaGCTCAGAAGGCAAAGTTTG | + |
Preference number: 2 (lower is better) Translates to: AVQKAYTNTVSLGTFRLLLLYVK*LRRQSL Trigger: CAAACTTTGCCTTCTGAGCCATTTGACGTAGAGAAG...AAGGAGACGGAAAGTCCCAAGTGACACAGTATTAGTGTATGCTTTCTGTACCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | CCATCAGAGGAGCAGCAGGAAAGAAGTCACAAGTTCTTGTGGCTTTTGGTCGGCGCTTGTTTAACTTCGTaGAATTTCTCCTTTTATCTG | + |
Preference number: 2 (lower is better) Translates to: PSEEQQERSHKFLWLLVGACLTS*NFSFYL Trigger: CAGATAAAAGGAGAAATTCCACGAAGTTAAACAAGC...GCCGACCAAAAGCCACAAGAACTTGTGACTTCTTTCCTGCTGCTCCTCTGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR TCA 90 bp | CCAGGTCCTAATGTTAGCCTGGAGCGTTCAAAGAGCCTGAACAAAAAGGAAGCAATTTCTCCTTTTATCTaGTCAGCATACCATTTCCTG | + |
Preference number: 2 (lower is better) Translates to: PGPNVSLERSKSLNKKEAISPFI*SAYHFL Trigger: CAGGAAATGGTATGCTGATCAGATAAAAGGAGAAAT...TGCTTCCTTTTTGTTCAGGCTCTTTGAACGCTCCAGGCTAACATTAGGACCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR GCA 90 bp | ATCTGGTTAATATTTTTGCATAGGGAGGCAGTGGCTACATTGCCTCTTTGTGGCATGAGAAATATTTGGTaGGAGTTCAGTAATAGCGAC | + |
Preference number: 2 (lower is better) Translates to: IWLIFLHREAVATLPLCGMRNIW*EFSNSD Trigger: GTCGCTATTACTGAACTCGCACCAAATATTTCTCAT...GCCACAAAGAGGCAATGTAGCCACTGCCTCCCTATGCAAAAATATTAACCAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CCA 90 bp | ATCTGGTTAATATTTTTGCATAGGGAGGCAGTGGCTACATTGCCTCTTTGTGGCTACATGGTTTCTACGTaGTCAAGAGGTATATACACA | + |
Preference number: 2 (lower is better) Translates to: IWLIFLHREAVATLPLCGYMVST*SRGIYT Trigger: TGTGTATATACCTCTTGACCACGTAGAAACCATGTA...GCCACAAAGAGGCAATGTAGCCACTGCCTCCCTATGCAAAAATATTAACCAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 72 bp | CCCCACACAACAGCACAGCGAGCCCGCGAGGAGCTCTaGGGGAGGCAGTGTCTGCCAGGCCTGGCAGTGTGG | + |
Preference number: 3 (lower is better) Translates to: PHTTAQRAREEL*GRQCLPGLAVW Trigger: CCACACTGCCAGGCCTGGCAGACACTGCCTCCCGCAGAGCTCCTCGCGGGCTCGCTGTGCTGTTGTGTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 72 bp | GCCATGGGCCTGAGGACTGAGGAGCCCACTGCAAGGTaGGGAACCCCCTCACTGGCTGGGGTTCTGCCCTCC | + |
Preference number: 3 (lower is better) Translates to: AMGLRTEEPTAR*GTPSLAGVLPS Trigger: GGAGGGCAGAACCCCAGCCAGTGAGGGGGTTCCCCACCTTGCAGTGGGCTCCTCAGTCCTCAGGCCCATGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CCA 72 bp | GCCTGTGCCCAGCTGGATTCGTGGCGTGGCGTTGATTaGTGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCG | + |
Preference number: 3 (lower is better) Translates to: ACAQLDSWRGVD*CPRWTCCAVAA Trigger: CGCAGCCACGGCGCAGCAGGTCCACCTCGGACACCAATCAACGCCACGCCACGAATCCAGCTGGGCACAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR TCA 72 bp | CTCTGCCTGTGCCCAGCTGGATTCGTGGCGTGGCGTTaGTTGGTGTCCGAGGTGGACCTGCTGCGCCGTGGC | + |
Preference number: 3 (lower is better) Translates to: LCLCPAGFVAWR*LVSEVDLLRRG Trigger: GCCACGGCGCAGCAGGTCCACCTCGGACACCAATCAACGCCACGCCACGAATCCAGCTGGGCACAGGCAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 72 bp | AGCGAGCCCGCGAGGAGCTCTGCGGGAGGCAGTGTCTaGCAGGCCTGGCAGTGTGGTAATTGTGCTCCACCG | + |
Preference number: 3 (lower is better) Translates to: SEPARSSAGGSV*QAWQCGNCAPP Trigger: CGGTGGAGCACAATTACCACACTGCCAGGCCTGGCAGACACTGCCTCCCGCAGAGCTCCTCGCGGGCTCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 72 bp | CCCCAGCTGCCCTCTGCCTGTGCCCAGCTGGATTCGTaGCGTGGCGTTGATTGGTGTCCGAGGTGGACCTGC | + |
Preference number: 3 (lower is better) Translates to: PQLPSACAQLDS*RGVDWCPRWTC Trigger: GCAGGTCCACCTCGGACACCAATCAACGCCACGCCACGAATCCAGCTGGGCACAGGCAGAGGGCAGCTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CCA 72 bp | CCTGTCACAGGTGGTGGCGAGGGTGACCGGGGAGACTaGGGTCCTTGGCAGGTGGAGGAACAACGTGCAGCC | + |
Preference number: 3 (lower is better) Translates to: PVTGGGEGDRGD*GPWQVEEQRAA Trigger: GGCTGCACGTTGTTCCTCCACCTGCCAAGGACCCCAGTCTCCCCGGTCACCCTCGCCACCACCTGTGACAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 72 bp | AAGCCGAACCCGCCCTGCCCTCTCACTCGGCCTGTGTaGCAGGGCCTCGGAAGCAGGTGTATGTATGTGCGC | + |
Preference number: 3 (lower is better) Translates to: KPNPPCPLTRPV*QGLGSRCMYVR Trigger: GCGCACATACATACACCTGCTTCCGAGGCCCTGGCACACAGGCCGAGTGAGAGGGCAGGGCGGGTTCGGCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR GCA 72 bp | TCCTTGGCAGGTGGAGGAACAACGTGCAGCCCCAGCTaGCCTCTGCCTGTGCCCAGCTGGATTCGTGGCGTG | + |
Preference number: 3 (lower is better) Translates to: SLAGGGTTCSPS*PLPVPSWIRGV Trigger: CACGCCACGAATCCAGCTGGGCACAGGCAGAGGGCAGCTGGGGCTGCACGTTGTTCCTCCACCTGCCAAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CCA 72 bp | GGAGCCCACTGCAAGGTGGGGAACCCCCTCACTGGCTaGGGTTCTGCCCTCCTCACCTTGCCTGAAAGCCTC | + |
Preference number: 3 (lower is better) Translates to: GAHCKVGNPLTG*GSALLTLPESL Trigger: GAGGCTTTCAGGCAAGGTGAGGAGGGCAGAACCCCAGCCAGTGAGGGGGTTCCCCACCTTGCAGTGGGCTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR GCA 72 bp | CGGCAGCCCTCCCACCCTCGGCCTGGAAATGGGAGCTaGTCCAGGGCACAAGGACTCCAAGTACGTGGAAAG | + |
Preference number: 3 (lower is better) Translates to: RQPSHPRPGNGS*SRAQGLQVRGK Trigger: CTTTCCACGTACTTGGAGTCCTTGTGCCCTGGAGCAGCTCCCATTTCCAGGCCGAGGGTGGGAGGGCTGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CCA 72 bp | TTCTCCACCCAATCGGCAGCCCTCCCACCCTCGGCCTaGAAATGGGAGCTGCTCCAGGGCACAAGGACTCCA | + |
Preference number: 3 (lower is better) Translates to: FSTQSAALPPSA*KWELLQGTRTP Trigger: TGGAGTCCTTGTGCCCTGGAGCAGCTCCCATTTCCAGGCCGAGGGTGGGAGGGCTGCCGATTGGGTGGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR GCA 72 bp | CTGTGTGCCAGGGCCTCGGAAGCAGGTGTATGTATGTaGGCACAGGAGACCTCTCAGCGGCAAGGCTGGCTG | + |
Preference number: 3 (lower is better) Translates to: LCARASEAGVCM*AQETSQRQGWL Trigger: CAGCCAGCCTTGCCGCTGAGAGGTCTCCTGTGCGCACATACATACACCTGCTTCCGAGGCCCTGGCACACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CCA 72 bp | GCGTTGATTGGTGTCCGAGGTGGACCTGCTGCGCCGTaGCTGCGGTTAGGAGGCCCAACTTGTCAAAGGCAC | + |
Preference number: 3 (lower is better) Translates to: ALIGVRGGPAAP*LRLGGPTCQRH Trigger: GTGCCTTTGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACACCAATCAACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR TCA 72 bp | GAACCTAGGAAAGCTACTGGGGCTAAGCCATGGGCCTaGGGACTGAGGAGCCCACTGCAAGGTGGGGAACCC | + |
Preference number: 3 (lower is better) Translates to: EPRKATGAKPWA*GLRSPLQGGEP Trigger: GGGTTCCCCACCTTGCAGTGGGCTCCTCAGTCCTCAGGCCCATGGCTTAGCCCCAGTAGCTTTCCTAGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR GCA 72 bp | GTGTGGCAACCCCAGCTCTTGGGTTTCTCTCCTCCGTaGCAGAGCTATGCAAACCCATGGGGCTTCCCGTGG | + |
Preference number: 3 (lower is better) Translates to: VWQPQLLGFSPP*QSYANPWGFPW Trigger: CCACGGGAAGCCCCATGGGTTTGCATAGCTCTGGCACGGAGGAGAGAAACCCAAGAGCTGGGGTTGCCACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR CCA 72 bp | GGTTTCTCTCCTCCGTGCCAGAGCTATGCAAACCCATaGGGCTTCCCGTGGAAGGTGGAGCTACCCACCAGG | + |
Preference number: 3 (lower is better) Translates to: GFSPPCQSYANP*GFPWKVELPTR Trigger: CCTGGTGGGTAGCTCCACCTTCCACGGGAAGCCCCATGGGTTTGCATAGCTCTGGCACGGAGGAGAGAAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR CCA 72 bp | CTGAGGGGTCACACGTGGTCTAGCCACACGGGTAGGTaGTGTGGCAACCCCAGCTCTTGGGTTTCTCTCCTC | + |
Preference number: 3 (lower is better) Translates to: LRGHTWSSHTGR*CGNPSSWVSLL Trigger: GAGGAGAGAAACCCAAGAGCTGGGGTTGCCACACCACCTACCCGTGTGGCTAGACCACGTGTGACCCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR TCA 72 bp | CCTCACTGGCTGGGGTTCTGCCCTCCTCACCTTGCCTaGAAGCCTCAGAAACCCAGTGAGACCCAGTCTGCT | + |
Preference number: 3 (lower is better) Translates to: PHWLGFCPPHLA*KPQKPSETQSA Trigger: AGCAGACTGGGTCTCACTGGGTTTCTGAGGCTTTCAGGCAAGGTGAGGAGGGCAGAACCCCAGCCAGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR GCA 72 bp | CCAGCTCTTGGGTTTCTCTCCTCCGTGCCAGAGCTATaGAAACCCATGGGGCTTCCCGTGGAAGGTGGAGCT | + |
Preference number: 3 (lower is better) Translates to: PALGFLSSVPEL*KPMGLPVEGGA Trigger: AGCTCCACCTTCCACGGGAAGCCCCATGGGTTTGCATAGCTCTGGCACGGAGGAGAGAAACCCAAGAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR CCA 72 bp | CTGGGCCAGCCTTTGTACTGGAGACCGTGTTCTCGATaGCGACCAGAGTTGACTGAGGCCACACTCAGCACG | + |
Preference number: 3 (lower is better) Translates to: LGQPLYWRPCSR*RPELTEATLST Trigger: CGTGCTGAGTGTGGCCTCAGTCAACTCTGGTCGCCATCGAGAACACGGTCTCCAGTACAAAGGCTGGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CCA 72 bp | AGCCACACGGGTAGGTGGTGTGGCAACCCCAGCTCTTaGGTTTCTCTCCTCCGTGCCAGAGCTATGCAAACC | + |
Preference number: 3 (lower is better) Translates to: SHTGRWCGNPSS*VSLLRARAMQT Trigger: GGTTTGCATAGCTCTGGCACGGAGGAGAGAAACCCAAGAGCTGGGGTTGCCACACCACCTACCCGTGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR CCA 72 bp | CAGGCCTGGCAGTGTGGTAATTGTGCTCCACCGGCGTaGTGGGTGACTCCACAGGCCATCTCCAAGAAAAGC | + |
Preference number: 3 (lower is better) Translates to: QAWQCGNCAPPA*WVTPQAISKKS Trigger: GCTTTTCTTGGAGATGGCCTGTGGAGTCACCCACCACGCCGGTGGAGCACAATTACCACACTGCCAGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR-3UTR CAA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGGTTAGGAGGCCCAACTaGTCAAAGGCACTCATGCGT | + |
Preference number: 3 (lower is better) Translates to: AGDETQGGPDRRCYSPTRVRRPN*SKALMR Trigger: ACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAAC...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR TCA 72 bp | TGTACTGGAGACCGTGTTCTCGATGGCGACCAGAGTTaGCTGAGGCCACACTCAGCACGCCTGACCTTCACC | + |
Preference number: 3 (lower is better) Translates to: CTGDRVLDGDQS*LRPHSARLTFT Trigger: GGTGAAGGTCAGGCGTGCTGAGTGTGGCCTCAGTCAACTCTGGTCGCCATCGAGAACACGGTCTCCAGTACA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR TCA 72 bp | CATGTCTCTCTCCTGGATATGGTGGATGTGAGATGCTaGGGCCTGGACCTGCCTCATCGCCGCTCCTTCCTG | + |
Preference number: 3 (lower is better) Translates to: HVSLLDMVDVRC*GLDLPHRRSFL Trigger: CAGGAAGGAGCGGCGATGAGGCAGGTCCAGGCCTCAGCATCTCACATCCACCATATCCAGGAGAGAGACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR TCA 72 bp | GGACTGACTCAGGGGGTCCAGGGACTGACTTACCCTTaGTCAGAGCGGGCCTTCTGGGCCCCACCTAATAAA | + |
Preference number: 3 (lower is better) Translates to: GLTQGVQGLTYP*SERAFWAPPNK Trigger: TTTATTAGGTGGGGCCCAGAAGGCCCGCTCTGATCAAGGGTAAGTCAGTCCCTGGACCCCCTGAGTCAGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR CCA 72 bp | AGGACGCTGAGGCCCAGCAAGCCATTGGGATGGGGTTaGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAG | + |
Preference number: 3 (lower is better) Translates to: RTLRPSKPLGWG*GFPASPSLPVK Trigger: CTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGGCTTGCTGGGCCTCAGCGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CCA 72 bp | GCCTGGCAGTGTGGTAATTGTGCTCCACCGGCGTGGTaGGTGACTCCACAGGCCATCTCCAAGAAAAGCAAG | + |
Preference number: 3 (lower is better) Translates to: AWQCGNCAPPAW*VTPQAISKKSK Trigger: CTTGCTTTTCTTGGAGATGGCCTGTGGAGTCACCCACCACGCCGGTGGAGCACAATTACCACACTGCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR-3UTR CAA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCGAGGCAGTGGCTACATaGCCTCTTTGTGGCAAGATG | + |
Preference number: 3 (lower is better) Translates to: YARAGDETQGGPDRRCYSEAVAT*PLCGKM Trigger: CATCTTGCCACAAAGAGGCAATGTAGCCACTGCCTC...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR TCA 72 bp | CAAGAGATCACCCTTCTAGACTCCCTCTCTCGGAGCTaGGGACTGACTCAGGGGGTCCAGGGACTGACTTAC | + |
Preference number: 3 (lower is better) Translates to: QEITLLDSLSRS*GLTQGVQGLTY Trigger: GTAAGTCAGTCCCTGGACCCCCTGAGTCAGTCCTCAGCTCCGAGAGAGGGAGTCTAGAAGGGTGATCTCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR TCA 72 bp | CCGTGGAAGGTGGAGCTACCCACCAGGCAAAGGCAGTaGTGTCAAGAGCCGAGAAGGAGGAGGGTTGAGTTA | + |
Preference number: 3 (lower is better) Translates to: PWKVELPTRQRQ*CQEPRRRRVEL Trigger: TAACTCAACCCTCCTCCTTCTCGGCTCTTGACATCACTGCCTTTGCCTGGTGGGTAGCTCCACCTTCCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR CCA 72 bp | GCTGTAGCTGGAGGCATTGTCCTCCCTGGTTCAGTGTaGAACCTAGGAAAGCTACTGGGGCTAAGCCATGGG | + |
Preference number: 3 (lower is better) Translates to: AVAGGIVLPGSV*NLGKLLGLSHG Trigger: CCCATGGCTTAGCCCCAGTAGCTTTCCTAGGTTCCACACTGAACCAGGGAGGACAATGCCTCCAGCTACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CCA 72 bp | AGAGCTATGCAAACCCATGGGGCTTCCCGTGGAAGGTaGAGCTACCCACCAGGCAAAGGCAGTGATGTCAAG | + |
Preference number: 3 (lower is better) Translates to: RAMQTHGASRGR*SYPPGKGSDVK Trigger: CTTGACATCACTGCCTTTGCCTGGTGGGTAGCTCCACCTTCCACGGGAAGCCCCATGGGTTTGCATAGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR-3UTR CAA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGATAAAGATGGGAAGATaGGGGCTGTCGTTGGTTGGT | + |
Preference number: 3 (lower is better) Translates to: AGDETQGGPDRRCYSPTRIKMGR*GLSLVG Trigger: ACCAACCAACGACAGCCCCAATCTTCCCATCTTTAT...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CAA 90 bp | CCATCAGAGGAGCAGCAGGAAAGAAGTCACAAGTTCTTGTGGCTTTTGGTCGGCCGATGGCGACCAGAGTaGACTGAGGCCACACTCAGC | + |
Preference number: 3 (lower is better) Translates to: PSEEQQERSHKFLWLLVGRWRPE*TEATLS Trigger: GCTGAGTGTGGCCTCAGTCAACTCTGGTCGCCATCG...GCCGACCAAAAGCCACAAGAACTTGTGACTTCTTTCCTGCTGCTCCTCTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CAA 90 bp | CCATTGGGATGGGGTTGGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCTGGTTGGTTGGTTGGTaGGTTCGGTCAGGCACCAAA | + |
Preference number: 3 (lower is better) Translates to: PLGWGWGFPASPSLPVKSWLVGW*VRSGTK Trigger: TTTGGTGCCTGACCGAACCAACCAACCAACCAACCA...GCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CAA 90 bp | CGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAGGGTGGTTGGTTGGTTGGTaGGTTGGTTCGGTCAGGCAC | + |
Preference number: 3 (lower is better) Translates to: RLGGPTCQRHSCVSVRKGWLVGW*VGSVRH Trigger: GTGCCTGACCGAACCAACCAACCAACCAACCAACCA...CCCTTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CAA 90 bp | CCATTGGGATGGGGTTGGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCGGCAGTCCACAGAGATaGAAGGACACACCAGAAGAC | + |
Preference number: 3 (lower is better) Translates to: PLGWGWGFPASPSLPVKSGSPQR*KDTPED Trigger: GTCTTCTGGTGTGTCCTTCAATCTCTGTGGACTGCC...GCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR TCA 72 bp | CAAGGTTGTGGACTTGCCCTGATGCCCAATGCTAACTaGGAGCACTTTAGCCGAGGCCAAGTCTACACTGCC | + |
Preference number: 3 (lower is better) Translates to: QGCGLALMPNAN*EHFSRGQVYTA Trigger: GGCAGTGTAGACTTGGCCTCGGCTAAAGTGCTCTCAGTTAGCATTGGGCATCAGGGCAAGTCCACAACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR GCA 72 bp | CTGCGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATaGGTCTCAGTCAGAAAAGGGTCTGAGTCCCTTGAG | + |
Preference number: 3 (lower is better) Translates to: LRLGGPTCQRHS*VSVRKGSESLE Trigger: CTCAAGGGACTCAGACCCTTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR GCA 72 bp | TGCTTGTTCGTTAGGCGTAAAGAGTTTAAGAATGCTTaGACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCT | + |
Preference number: 3 (lower is better) Translates to: CLFVRRKEFKNA*TEAGGLCGRGA Trigger: AGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTTAAACTCTTTACGCCTAACGAACAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CCA 72 bp | TCTGAGCCACAGCCATCTTCAGAGGACATCACGGCTTaGACACAGCCATCAGAGGAGCAGCAGGAAAGAAGT | + |
Preference number: 3 (lower is better) Translates to: SEPQPSSEDITA*TQPSEEQQERS Trigger: ACTTCTTTCCTGCTGCTCCTCTGATGGCTGTGTCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGGCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CAA 90 bp | AGGAGCTCTGCGGGAGGCAGTGTCTGCCAGGCCTGGCAGTGTGGTAATTGTGCTATCTGGTTAATATTTTaGCATAGGGAGGCAGTGGCT | + |
Preference number: 3 (lower is better) Translates to: RSSAGGSVCQAWQCGNCAIWLIF*HREAVA Trigger: AGCCACTGCCTCCCTATGCAAAAATATTAACCAGAT...AGCACAATTACCACACTGCCAGGCCTGGCAGACACTGCCTCCCGCAGAGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR-3UTR CAA 90 bp | CCATTGGGATGGGGTTGGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCAAGAGAGGAGGTGGGTaGAGAAGAGTAAGGGGCAAA | + |
Preference number: 3 (lower is better) Translates to: PLGWGWGFPASPSLPVKSKRGGG*RRVRGK Trigger: TTTGCCCCTTACTCTTCTCAACCCACCTCCTCTCTT...GCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CAA 90 bp | CCAGGTCCTAATGTTAGCCTGGAGCGTTCAAAGAGCCTGAACAAAAAGGAAGCACGATGGCGACCAGAGTaGACTGAGGCCACACTCAGC | + |
Preference number: 3 (lower is better) Translates to: PGPNVSLERSKSLNKKEARWRPE*TEATLS Trigger: GCTGAGTGTGGCCTCAGTCAACTCTGGTCGCCATCG...TGCTTCCTTTTTGTTCAGGCTCTTTGAACGCTCCAGGCTAACATTAGGACCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CAA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCAAGTTCTTGTGGCTTTaGGTCGGCAGCTTTCTAACA | + |
Preference number: 3 (lower is better) Translates to: YARAGDETQGGPDRRCYSKFLWL*VGSFLT Trigger: TGTTAGAAAGCTGCCGACCAAAAGCCACAAGAACTT...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR TCA 72 bp | ACTCTGTGGGCCGCTGCTATGAGCAGACCTCTAAGGTaGTTCCTAACTGACTCTCTCTGTTCCCCATGTTCC | + |
Preference number: 3 (lower is better) Translates to: TLWAAAMSRPLR*FLTDSLCSPCS Trigger: GGAACATGGGGAACAGAGAGAGTCAGTTAGGAATCACCTTAGAGGTCTGCTCATAGCAGCGGCCCACAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR CCA 72 bp | AGATGGGAAGATTGGGGCTGTCGTTGGTTGGTTGGTTaGTTGGTTGGTTGGTTGGTTCGGTCAGGCACCAAA | + |
Preference number: 3 (lower is better) Translates to: RWEDWGCRWLVG*LVGWLVRSGTK Trigger: TTTGGTGCCTGACCGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCCCCAATCTTCCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CCA 72 bp | AAGATTAGGGGTGGGAGAAATCCCCACACCATGGTCTaGGTCTTCTATGCCATCCGCTCCTTCTCTAGGACT | + |
Preference number: 3 (lower is better) Translates to: KIRGGRNPHTMV*VFYAIRSFSRT Trigger: AGTCCTAGAGAAGGAGCGGATGGCATAGAAGACCCAGACCATGGTGTGGGGATTTCTCCCACCCCTAATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR CCA 72 bp | CAGACAAGATTAGGGGTGGGAGAAATCCCCACACCATaGTCTGGGTCTTCTATGCCATCCGCTCCTTCTCTA | + |
Preference number: 3 (lower is better) Translates to: QTRLGVGEIPTP*SGSSMPSAPSL Trigger: TAGAGAAGGAGCGGATGGCATAGAAGACCCAGACCATGGTGTGGGGATTTCTCCCACCCCTAATCTTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR-3UTR CAA 90 bp | CCATCAGAGGAGCAGCAGGAAAGAAGTCACAAGTTCTTGTGGCTTTTGGTCGGCTGGTTGGTTGGTTGGTaGGTTCGGTCAGGCACCAAA | + |
Preference number: 3 (lower is better) Translates to: PSEEQQERSHKFLWLLVGWLVGW*VRSGTK Trigger: TTTGGTGCCTGACCGAACCAACCAACCAACCAACCA...GCCGACCAAAAGCCACAAGAACTTGTGACTTCTTTCCTGCTGCTCCTCTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CAA 90 bp | CGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAGGGGGCTACATTGCCTCTTaGTGGCAAGATGAGAGCTCA | + |
Preference number: 3 (lower is better) Translates to: RLGGPTCQRHSCVSVRKGGYIAS*WQDESS Trigger: TGAGCTCTCATCTTGCCACAAAGAGGCAATGTAGCC...CCCTTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CAA 90 bp | CCAGGTCCTAATGTTAGCCTGGAGCGTTCAAAGAGCCTGAACAAAAAGGAAGCACTCAGAAGGCAAAGTTaGGCTGCAAGGGCTATGGCC | + |
Preference number: 3 (lower is better) Translates to: PGPNVSLERSKSLNKKEALRRQS*AARAMA Trigger: GGCCATAGCCCTTGCAGCCAAACTTTGCCTTCTGAG...TGCTTCCTTTTTGTTCAGGCTCTTTGAACGCTCCAGGCTAACATTAGGACCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CCA 72 bp | TGGGGCTGTCGTTGGTTGGTTGGTTGGTTGGTTGGTTaGTTGGTTCGGTCAGGCACCAAAACAAGAAACTCA | + |
Preference number: 3 (lower is better) Translates to: WGCRWLVGWLVG*LVRSGTKTRNS Trigger: TGAGTTTCTTGTTTTGGTGCCTGACCGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CCA 72 bp | ATAAAGATGGGAAGATTGGGGCTGTCGTTGGTTGGTTaGTTGGTTGGTTGGTTGGTTGGTTCGGTCAGGCAC | + |
Preference number: 3 (lower is better) Translates to: IKMGRLGLSLVG*LVGWLVGSVRH Trigger: GTGCCTGACCGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCCCCAATCTTCCCATCTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR CCA 72 bp | GCTCATAAAGATGGGAAGATTGGGGCTGTCGTTGGTTaGTTGGTTGGTTGGTTGGTTGGTTGGTTCGGTCAG | + |
Preference number: 3 (lower is better) Translates to: AHKDGKIGAVVG*LVGWLVGWFGQ Trigger: CTGACCGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCCCCAATCTTCCCATCTTTATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CAA 90 bp | GTTTGTTTGTTTCGCAGTTGTCATCGTACCAACGCATGCAAAGCATTCCACTCCCTCAGAAGGCAAAGTTaGGCTGCAAGGGCTATGGCC | + |
Preference number: 3 (lower is better) Translates to: VCLFRSCHRTNACKAFHSLRRQS*AARAMA Trigger: GGCCATAGCCCTTGCAGCCAAACTTTGCCTTCTGAG...GGAGTGGAATGCTTTGCATGCGTTGGTACGATGACAACTGCGAAACAAACAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR-3UTR CAA 90 bp | AAAGAGTTTAAGAATGCTTGCACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCTATCTGGTTAATATTTTaGCATAGGGAGGCAGTGGCT | + |
Preference number: 3 (lower is better) Translates to: KEFKNACTEAGGLCGRGAIWLIF*HREAVA Trigger: AGCCACTGCCTCCCTATGCAAAAATATTAACCAGAT...AGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTTAAACTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR TCA 72 bp | CCGAGGCCAAGTCTACACTGCCGATGCTGTGCCGTCTaGTTCATCTGGTTAATATTTTTGCATAGGGAGGCA | + |
Preference number: 3 (lower is better) Translates to: PRPSLHCRCCAV*FIWLIFLHREA Trigger: TGCCTCCCTATGCAAAAATATTAACCAGATGAATCAGACGGCACAGCATCGGCAGTGTAGACTTGGCCTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR TCA 72 bp | TTCTTGTGGCTTTTGGTCGGCAGCTTTCTAACACCCTaGCTTTCTTTCCTGGGCCAGCCTTTGTACTGGAGA | + |
Preference number: 3 (lower is better) Translates to: FLWLLVGSFLTP*LSFLGQPLYWR Trigger: TCTCCAGTACAAAGGCTGGCCCAGGAAAGAAAGTCAGGGTGTTAGAAAGCTGCCGACCAAAAGCCACAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR GCA 72 bp | GCAAACCCAAGGACATATCTAGCTAGTCTTTGCATCTaGAGGATGTTGTATAGAGAGGACTCTGTGGGCCGC | + |
Preference number: 3 (lower is better) Translates to: ANPRTYLASLCI*RMLYREDSVGR Trigger: GCGGCCCACAGAGTCCTCTCTATACAACATCCTGCAGATGCAAAGACTAGCTAGATATGTCCTTGGGTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR CCA 72 bp | AGATTGGGGCTGTCGTTGGTTGGTTGGTTGGTTGGTTaGTTGGTTGGTTCGGTCAGGCACCAAAACAAGAAA | + |
Preference number: 3 (lower is better) Translates to: RLGLSLVGWLVG*LVGSVRHQNKK Trigger: TTTCTTGTTTTGGTGCCTGACCGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCCCCAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR-3UTR CAA 90 bp | ATCTGGTTAATATTTTTGCATAGGGAGGCAGTGGCTACATTGCCTCTTTGTGGCTCTGCCCTCCTCACCTaGCCTGAAAGCCTCAGAAAC | + |
Preference number: 3 (lower is better) Translates to: IWLIFLHREAVATLPLCGSALLT*PESLRN Trigger: GTTTCTGAGGCTTTCAGGCAAGGTGAGGAGGGCAGA...GCCACAAAGAGGCAATGTAGCCACTGCCTCCCTATGCAAAAATATTAACCAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CAA 90 bp | GTTTGTTTGTTTCGCAGTTGTCATCGTACCAACGCATGCAAAGCATTCCACTCCGAGGCAGTGGCTACATaGCCTCTTTGTGGCAAGATG | + |
Preference number: 3 (lower is better) Translates to: VCLFRSCHRTNACKAFHSEAVAT*PLCGKM Trigger: CATCTTGCCACAAAGAGGCAATGTAGCCACTGCCTC...GGAGTGGAATGCTTTGCATGCGTTGGTACGATGACAACTGCGAAACAAACAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
||
3UTR-3UTR CAA 90 bp | CCAGGTCCTAATGTTAGCCTGGAGCGTTCAAAGAGCCTGAACAAAAAGGAAGCAAAGAGAGGAGGTGGGTaGAGAAGAGTAAGGGGCAAA | + |
Preference number: 3 (lower is better) Translates to: PGPNVSLERSKSLNKKEAKRGGG*RRVRGK Trigger: TTTGCCCCTTACTCTTCTCAACCCACCTCCTCTCTT...TGCTTCCTTTTTGTTCAGGCTCTTTGAACGCTCCAGGCTAACATTAGGACCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR-3UTR CAA 90 bp | GCGGTACAGAAAGCATACACTAATACTGTGTCACTTGGGACTTTCCGTCTCCTTGGCTACATTGCCTCTTaGTGGCAAGATGAGAGCTCA | + |
Preference number: 3 (lower is better) Translates to: AVQKAYTNTVSLGTFRLLGYIAS*WQDESS Trigger: TGAGCTCTCATCTTGCCACAAAGAGGCAATGTAGCC...AAGGAGACGGAAAGTCCCAAGTGACACAGTATTAGTGTATGCTTTCTGTACCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
3UTR GCA 72 bp | GTTTGTTTGTTTCGCAGTTGTCATCGTACCAACGCATaGAAAGCATTCCACTCCCAGAAACGACGCCAAAAT | + |
Preference number: 3 (lower is better) Translates to: VCLFRSCHRTNA*KAFHSQKRRQN Trigger: ATTTTGGCGTCGTTTCTGGGAGTGGAATGCTTTGCATGCGTTGGTACGATGACAACTGCGAAACAAACAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 72 bp | AAGGGGCAAAGGACAGTTAAAGAATGCCAGGAGACCTaGTATTTTCTGCACACAACTAAGAGCTACACTCGA | + |
Preference number: 3 (lower is better) Translates to: KGQRTVKECQET*YFLHTTKSYTR Trigger: TCGAGTGTAGCTCTTAGTTGTGTGCAGAAAATACCAGGTCTCCTGGCATTCTTTAACTGTCCTTTGCCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 72 bp | GTTGAGAAGAGTAAGGGGCAAAGGACAGTTAAAGAATaGCAGGAGACCTGGTATTTTCTGCACACAACTAAG | + |
Preference number: 3 (lower is better) Translates to: VEKSKGQRTVKE*QETWYFLHTTK Trigger: CTTAGTTGTGTGCAGAAAATACCAGGTCTCCTGGCATTCTTTAACTGTCCTTTGCCCCTTACTCTTCTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 72 bp | CATGTTGCAAACCCAAGGACATATCTAGCTAGTCTTTaGATCTGCAGGATGTTGTATAGAGAGGACTCTGTG | + |
Preference number: 3 (lower is better) Translates to: HVANPRTYLASL*ICRMLYREDSV Trigger: CACAGAGTCCTCTCTATACAACATCCTGCAGATGCAAAGACTAGCTAGATATGTCCTTGGGTTTGCAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 72 bp | CACAGAATAGCTAGAGACCCCTACATGGTTTCTACGTaGTCAAGAGGTATATACACAATCCCTCAAAGGTCA | + |
Preference number: 3 (lower is better) Translates to: HRIARDPYMVST*SRGIYTIPQRS Trigger: TGACCTTTGAGGGATTGTGTATATACCTCTTGACCACGTAGAAACCATGTAGGGGTCTCTAGCTATTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 72 bp | GGACAGTTAAAGAATGCCAGGAGACCTGGTATTTTCTaGACACAACTAAGAGCTACACTCGAGTTAGAATTT | + |
Preference number: 3 (lower is better) Translates to: GQLKNARRPGIF*TQLRATLELEF Trigger: AAATTCTAACTCGAGTGTAGCTCTTAGTTGTGTGCAGAAAATACCAGGTCTCCTGGCATTCTTTAACTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR GCA 72 bp | CTTGTCACTAGATCACAGCATACAGAATCAAAGGTTTaGATTTCGTATGGAATGTATCCAAAGAGGCCAGCA | + |
Preference number: 3 (lower is better) Translates to: LVTRSQHTESKV*ISYGMYPKRPA Trigger: TGCTGGCCTCTTTGGATACATTCCATACGAAATGCAAACCTTTGATTCTGTATGCTGTGATCTAGTGACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CCA 72 bp | AGAGGTGAAGGATGTGTTGATGTTAGGAAGAATCACTaGATGTGTTTTGGGAGAAATTTAGGGAGCATCCAA | + |
Preference number: 3 (lower is better) Translates to: RGEGCVDVRKNH*MCFGRNLGSIQ Trigger: TTGGATGCTCCCTAAATTTCTCCCAAAACACATCCAGTGATTCTTCCTAACATCAACACATCCTTCACCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CCA 72 bp | CGACTCCAAAACTTATCCTGGGCTTGTTTAACTTCGTaGAATTTCTCCTTTTATCTGATCAGCATACCATTT | + |
Preference number: 3 (lower is better) Translates to: RLQNLSWACLTS*NFSFYLISIPF Trigger: AAATGGTATGCTGATCAGATAAAAGGAGAAATTCCACGAAGTTAAACAAGCCCAGGATAAGTTTTGGAGTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR TCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCAGGGCCATGTGGGCGCTaGGGCCCGGCTGCGACTGCA | + |
Preference number: 4 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSGPCGR*GPAATA Trigger: TGCAGTCGCAGCCGGGCCTCAGCGCCCACATGGCCC...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CAA 72 bp | CCTCTGCCTGTGCCCAGCTGGATTCGTGGCGTGGCGTaGATTGGTGTCCGAGGTGGACCTGCTGCGCCGTGG | + |
Preference number: 4 (lower is better) Translates to: PLPVPSWIRGVA*IGVRGGPAAPW Trigger: CCACGGCGCAGCAGGTCCACCTCGGACACCAATCAACGCCACGCCACGAATCCAGCTGGGCACAGGCAGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR GCA 90 bp | AGGAGCTCTGCGGGAGGCAGTGTCTGCCAGGCCTGGCAGTGTGGTAATTGTGCTTGCAGCGTGCCACTGTaGTGGTGGGCCGGGGCCATG | + |
Preference number: 4 (lower is better) Translates to: RSSAGGSVCQAWQCGNCACSVPL*WWAGAM Trigger: CATGGCCCCGGCCCACCAGCACAGTGGCACGCTGCA...AGCACAATTACCACACTGCCAGGCCTGGCAGACACTGCCTCCCGCAGAGCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR GCA 90 bp | ACCCTCGGCCTGGAAATGGGAGCTGCTCCAGGGCACAAGGACTCCAAGTACGTGGCGACTGGTGCAGCGTaGCACTGTGCTGGTGGGCCG | + |
Preference number: 4 (lower is better) Translates to: TLGLEMGAAPGHKDSKYVATGAA*HCAGGP Trigger: CGGCCCACCAGCACAGTGGCACGCTGCACCAGTCGC...CACGTACTTGGAGTCCTTGTGCCCTGGAGCAGCTCCCATTTCCAGGCCGAGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCGTGCCACTGTGCTGGTaGGCCGGGGCCATGTGGGCG | + |
Preference number: 4 (lower is better) Translates to: YARAGDETQGGPDRRCYSVPLCW*AGAMWA Trigger: CGCCCACATGGCCCCGGCCCACCAGCACAGTGGCAC...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR TCA 90 bp | CAGCTGCACAGCAAGGCGATGAGGCAGTCACCATTCCTGATGGGTGGGTCTTCCACGAGCCTGCGGTGCTaGGCTTCCAGGAGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: QLHSKAMRQSPFLMGGSSTSLRC*ASRSCC Trigger: GCAGCAGCTCCTGGAAGCTCAGCACCGCAGGCTCGT...GGAAGACCCACCCATCAGGAATGGTGACTGCCTCATCGCCTTGCTGTGCAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR TCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGGCCAGATACCGGGGCTaGGGTGTCTGCAGTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: AGDETQGGPDRRCYSPTRARYRG*GVCSWW Trigger: CCACCAACTGCAGACACCTCAGCCCCGGTATCTGGC...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR GCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCAGCTTCCAGGAGCTGCTaGTGCAGCAGGTATTGCTGG | + |
Preference number: 4 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSASRSC*CSRYCW Trigger: CCAGCAATACCTGCTGCAGCAGCAGCTCCTGGAAGC...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR TCA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCAGCCGGCGTCCACACTaGGATCCCAGTCAGTGCCCT | + |
Preference number: 4 (lower is better) Translates to: YARAGDETQGGPDRRCYSSRRPH*DPSQCP Trigger: AGGGCACTGACTGGGATCTCAGTGTGGACGCCGGCT...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | CCCTACCCCAATAGGCAGTCCACAGAGATTGAAGGACACACCAGAAGACGGGGCAGCGGGGTCAGCGACTaGTGCAGCGTGCCACTGTGC | + |
Preference number: 4 (lower is better) Translates to: PYPNRQSTEIEGHTRRRGSGVSD*CSVPLC Trigger: GCACAGTGGCACGCTGCACCAGTCGCTGACCCCGCT...GCCCCGTCTTCTGGTGTGTCCTTCAATCTCTGTGGACTGCCTATTGGGGTAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCGGACCTGTGACGTCCTaGAACTGCAGGGTGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: YARAGDETQGGPDRRCYSGPVTS*NCRVGS Trigger: GCTGCCCACCCTGCAGTTCCAGGACGTCACAGGTCC...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | CGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAGGGAGCGTGCCACTGTGCTaGTGGGCCGGGGCCATGTGG | + |
Preference number: 4 (lower is better) Translates to: RLGGPTCQRHSCVSVRKGSVPLC*WAGAMW Trigger: CCACATGGCCCCGGCCCACCAGCACAGTGGCACGCT...CCCTTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | CCACAGCCATCTTCAGAGGACATCACGGCTTGGACACAGCCATCAGAGGAGCAGGGGATGGGCCGCACCTaGAACTGGGCAGGACTCAAG | + |
Preference number: 4 (lower is better) Translates to: PQPSSEDITAWTQPSEEQGMGRT*NWAGLK Trigger: CTTGAGTCCTGCCCAGTTCCAGGTGCGGCCCATCCC...CTGCTCCTCTGATGGCTGTGTCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR GCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCATTTCTCGGGAAGTGGTaGATTCGAGGAGTTGCCAAG | + |
Preference number: 4 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSFLGKW*IRGVAK Trigger: CTTGGCAACTCCTCGAATGCACCACTTCCCGAGAAA...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR GCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCAAGTTGGTGGAAGAGATaGATACAAGGTAGGCGTCTC | + |
Preference number: 4 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSSWWKR*IQGRRL Trigger: GAGACGCCTACCTTGTATGCATCTCTTCCACCAACT...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CCA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCGGCATTTCTTGCTCATaGCGAGCCACTGGTCCACAC | + |
Preference number: 4 (lower is better) Translates to: YARAGDETQGGPDRRCYSGISCS*RATGPH Trigger: GTGTGGACCAGTGGCTCGCCATGAGCAAGAAATGCC...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 72 bp | ACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTaGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAGG | + |
Preference number: 4 (lower is better) Translates to: TCCAVAAVRRPN*SKALMRLSQKR Trigger: CCTTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR GCA 90 bp | CCACAGCCATCTTCAGAGGACATCACGGCTTGGACACAGCCATCAGAGGAGCAGCCCCTTCATCTTTCTTaGCCTTGCTGTCCTGGGGTC | + |
Preference number: 4 (lower is better) Translates to: PQPSSEDITAWTQPSEEQPLHLS*PCCPGV Trigger: GACCCCAGGACAGCAAGGGCAAGAAAGATGAAGGGG...CTGCTCCTCTGATGGCTGTGTCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CCA 90 bp | TGTCCGAGGTGGACCTGCTGCGCCGTGGCTGCGGTTAGGAGGCCCAACTTGTCACGCTTCTTATACTTGTaGGGGAAGGTGAATCTCTCA | + |
Preference number: 4 (lower is better) Translates to: CPRWTCCAVAAVRRPNLSRFLYL*GKVNLS Trigger: TGAGAGATTCACCTTCCCCCACAAGTATAAGAAGCG...TGACAAGTTGGGCCTCCTAACCGCAGCCACGGCGCAGCAGGTCCACCTCGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CCA 90 bp | CCATTGGGATGGGGTTGGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCCTCATGGCGAGCCACTaGTCCACACACAGTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: PLGWGWGFPASPSLPVKSLMASH*STHSWW Trigger: CCACCAACTGTGTGTGGACCAGTGGCTCGCCATGAG...GCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 72 bp | TTGTACTGGAGACCGTGTTCTCGATGGCGACCAGAGTaGACTGAGGCCACACTCAGCACGCCTGACCTTCAC | + |
Preference number: 4 (lower is better) Translates to: LYWRPCSRWRPE*TEATLSTPDLH Trigger: GTGAAGGTCAGGCGTGCTGAGTGTGGCCTCAGTCAACTCTGGTCGCCATCGAGAACACGGTCTCCAGTACAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR TCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGACTTGTGGGGGAAGGTaGATCTCTCAATGGTGTTCT | + |
Preference number: 4 (lower is better) Translates to: AGDETQGGPDRRCYSPTRTCGGR*ISQWCS Trigger: AGAACACCATTGAGAGATTCACCTTCCCCCACAAGT...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR GCA 90 bp | CCCTACCCCAATAGGCAGTCCACAGAGATTGAAGGACACACCAGAAGACGGGGCAGATGGGGCATTTCTTaGTCATGGCGAGCCACTGGT | + |
Preference number: 4 (lower is better) Translates to: PYPNRQSTEIEGHTRRRGRWGIS*SWRATG Trigger: ACCAGTGGCTCGCCATGAGCAAGAAATGCCCCATCT...GCCCCGTCTTCTGGTGTGTCCTTCAATCTCTGTGGACTGCCTATTGGGGTAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CCA 90 bp | CCACAGCCATCTTCAGAGGACATCACGGCTTGGACACAGCCATCAGAGGAGCAGCACAGAGCCAAACACTaGAAGCACGAGATAGCCGAC | + |
Preference number: 4 (lower is better) Translates to: PQPSSEDITAWTQPSEEQHRAKH*KHEIAD Trigger: GTCGGCTATCTCGTGCTTCCAGTGTTTGGCTCTGTG...CTGCTCCTCTGATGGCTGTGTCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | ATATTTGGTGCGAGTTCAGTAATAGCGACATGTCCACCACAGATGACGAGAGCAGGCCGCACCTGGAACTaGGCAGGACTCAAGCCGGCG | + |
Preference number: 4 (lower is better) Translates to: IFGASSVIATCPPQMTRAGRTWN*AGLKPA Trigger: CGCCGGCTTGAGTCCTGCCCAGTTCCAGGTGCGGCC...TGCTCTCGTCATCTGTGGTGGACATGTCGCTATTACTGAACTCGCACCAAATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | CCCAATAGGCAGTCCACAGAGATTGAAGGACACACCAGAAGACGGGGCCTGGGAGAGTTTCTCGGGAAGTaGTGCATTCGAGGAGTTGCC | + |
Preference number: 4 (lower is better) Translates to: PNRQSTEIEGHTRRRGLGEFLGK*CIRGVA Trigger: GGCAACTCCTCGAATGCACCACTTCCCGAGAAACTC...TCCCAGGCCCCGTCTTCTGGTGTGTCCTTCAATCTCTGTGGACTGCCTATTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | CCACAGCCATCTTCAGAGGACATCACGGCTTGGACACAGCCATCAGAGGAGCAGTGTCCACTCGGCAGATaGGGCATTTCTTGCTCATGG | + |
Preference number: 4 (lower is better) Translates to: PQPSSEDITAWTQPSEEQCPLGR*GISCSW Trigger: CCATGAGCAAGAAATGCCCCATCTGCCGAGTGGACA...CTGCTCCTCTGATGGCTGTGTCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 72 bp | CCTGGGATGAGGCAGGCAGCCATTCCTTCACGATGGTaGTCCTGGAAGGATCTCTCTCAAGTCCAATTGGCC | + |
Preference number: 4 (lower is better) Translates to: PGMRQAAIPSRW*SWKDLSQVQLA Trigger: GGCCAATTGGACTTGAGAGAGATCCTTCCAGGACAACCATCGTGAAGGAATGGCTGCCTGCCTCATCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
||
CDS-3UTR GCA 90 bp | GTTTGTTTGTTTCGCAGTTGTCATCGTACCAACGCATGCAAAGCATTCCACTCCGGGGTCAGCGACTGGTaGAGCGTGCCACTGTGCTGG | + |
Preference number: 4 (lower is better) Translates to: VCLFRSCHRTNACKAFHSGVSDW*SVPLCW Trigger: CCAGCACAGTGGCACGCTGCACCAGTCGCTGACCCC...GGAGTGGAATGCTTTGCATGCGTTGGTACGATGACAACTGCGAAACAAACAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR GCA 90 bp | GTTTGTTTGTTTCGCAGTTGTCATCGTACCAACGCATGCAAAGCATTCCACTCCGTGACGTCCTGGAACTaGAGGGTGGGCAGCGGGGTC | + |
Preference number: 4 (lower is better) Translates to: VCLFRSCHRTNACKAFHSVTSWN*RVGSGV Trigger: GACCCCGCTGCCCACCCTGCAGTTCCAGGACGTCAC...GGAGTGGAATGCTTTGCATGCGTTGGTACGATGACAACTGCGAAACAAACAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | TGTAGCTGGAGGCATTGTCCTCCCTGGTTCAGTGTGGAACCTAGGAAAGCTACTGGTGTCTGCAGTTGGTaGCCAAAGTCGAAGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: CSWRHCPPWFSVEPRKATGVCSW*PKSKLG Trigger: CCCCAGCTTCGACTTTGGCCACCAACTGCAGACACC...AGTAGCTTTCCTAGGTTCCACACTGAACCAGGGAGGACAATGCCTCCAGCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | CCACAGCCATCTTCAGAGGACATCACGGCTTGGACACAGCCATCAGAGGAGCAGTTGCCCTTGCTGTCCTaGGGTCTTCGCTTCTTATAC | + |
Preference number: 4 (lower is better) Translates to: PQPSSEDITAWTQPSEEQLPLLS*GLRFLY Trigger: GTATAAGAAGCGAAGACCCCAGGACAGCAAGGGCAA...CTGCTCCTCTGATGGCTGTGTCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CCA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGTCCACACACAGTTGGTaGAAGAGATGCATACAAGGT | + |
Preference number: 4 (lower is better) Translates to: AGDETQGGPDRRCYSPTRSTHSW*KRCIQG Trigger: ACCTTGTATGCATCTCTTCCACCAACTGTGTGTGGA...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR GCA 90 bp | TCTACGTGGTCAAGAGGTATATACACAATCCCTCAAAGGTCAGGATTGAGGGGCGATGCGAGACGAGCCTaGGGTGCTGAGCTTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: STWSRGIYTIPQRSGLRGDARRA*GAELPG Trigger: TCCTGGAAGCTCAGCACCGCAGGCTCGTCTCGCATC...GCCCCTCAATCCTGACCTTTGAGGGATTGTGTATATACCTCTTGACCACGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | CTGCGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAGGCATTTCTTGCTCATaGCGAGCCACTGGTCCACAC | + |
Preference number: 4 (lower is better) Translates to: LRLGGPTCQRHSCVSVRKGISCS*RATGPH Trigger: GTGTGGACCAGTGGCTCGCCATGAGCAAGAAATGCC...TTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 72 bp | AAGATGGGAAGATTGGGGCTGTCGTTGGTTGGTTGGTaGGTTGGTTGGTTGGTTGGTTCGGTCAGGCACCAA | + |
Preference number: 4 (lower is better) Translates to: KMGRLGLSLVGW*VGWLVGSVRHQ Trigger: TTGGTGCCTGACCGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCCCCAATCTTCCCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CCA 90 bp | ATCTGGTTAATATTTTTGCATAGGGAGGCAGTGGCTACATTGCCTCTTTGTGGCGGCCAAAGTCGAAGCTaGGGTGAAGGCGGTGGGGGT | + |
Preference number: 4 (lower is better) Translates to: IWLIFLHREAVATLPLCGGQSRS*GEGGGG Trigger: ACCCCCACCGCCTTCACCCCAGCTTCGACTTTGGCC...GCCACAAAGAGGCAATGTAGCCACTGCCTCCCTATGCAAAAATATTAACCAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CCA 90 bp | TGTAGCTGGAGGCATTGTCCTCCCTGGTTCAGTGTGGAACCTAGGAAAGCTACTGGACAACCATCTGTGTaGACGAGGAGTTTCTCGGGA | + |
Preference number: 4 (lower is better) Translates to: CSWRHCPPWFSVEPRKATGQPSV*TRSFSG Trigger: TCCCGAGAAACTCCTCGTCCACACAGATGGTTGTCC...AGTAGCTTTCCTAGGTTCCACACTGAACCAGGGAGGACAATGCCTCCAGCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CCA 90 bp | CCACAGCCATCTTCAGAGGACATCACGGCTTGGACACAGCCATCAGAGGAGCAGTCCACACACAGTTGGTaGAAGAGATGCATACAAGGT | + |
Preference number: 4 (lower is better) Translates to: PQPSSEDITAWTQPSEEQSTHSW*KRCIQG Trigger: ACCTTGTATGCATCTCTTCCACCAACTGTGTGTGGA...CTGCTCCTCTGATGGCTGTGTCCAAGCCGTGATGTCCTCTGAAGATGGCTGTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CCA 90 bp | CCATCAGAGGAGCAGCAGGAAAGAAGTCACAAGTTCTTGTGGCTTTTGGTCGGCTGTCCACTCGGCAGATaGGGCATTTCTTGCTCATGG | + |
Preference number: 4 (lower is better) Translates to: PSEEQQERSHKFLWLLVGCPLGR*GISCSW Trigger: CCATGAGCAAGAAATGCCCCATCTGCCGAGTGGACA...GCCGACCAAAAGCCACAAGAACTTGTGACTTCTTTCCTGCTGCTCCTCTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 72 bp | TTGGGGCTGTCGTTGGTTGGTTGGTTGGTTGGTTGGTaGGTTGGTTCGGTCAGGCACCAAAACAAGAAACTC | + |
Preference number: 4 (lower is better) Translates to: LGLSLVGWLVGW*VGSVRHQNKKL Trigger: GAGTTTCTTGTTTTGGTGCCTGACCGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR GCA 90 bp | TCTACGTGGTCAAGAGGTATATACACAATCCCTCAAAGGTCAGGATTGAGGGGCCATCTTTCTTGCCCTTaGTGTCCTGGGGTCTTCGCT | + |
Preference number: 4 (lower is better) Translates to: STWSRGIYTIPQRSGLRGHLSCP*CPGVFA Trigger: AGCGAAGACCCCAGGACAGCAAGGGCAAGAAAGATG...GCCCCTCAATCCTGACCTTTGAGGGATTGTGTATATACCTCTTGACCACGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR GCA 90 bp | GCGGTACAGAAAGCATACACTAATACTGTGTCACTTGGGACTTTCCGTCTCCTTCCCCTTCATCTTTCTTaGCCTTGCTGTCCTGGGGTC | + |
Preference number: 4 (lower is better) Translates to: AVQKAYTNTVSLGTFRLLPLHLS*PCCPGV Trigger: GACCCCAGGACAGCAAGGGCAAGAAAGATGAAGGGG...AAGGAGACGGAAAGTCCCAAGTGACACAGTATTAGTGTATGCTTTCTGTACCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CCA 90 bp | CATAAAGATGGGAAGATTGGGGCTGTCGTTGGTTGGTTGGTTGGTTGGTTGGTTGGACAACCATCTGTGTaGACGAGGAGTTTCTCGGGA | + |
Preference number: 4 (lower is better) Translates to: HKDGKIGAVVGWLVGWLVGQPSV*TRSFSG Trigger: TCCCGAGAAACTCCTCGTCCACACAGATGGTTGTCC...AACCAACCAACCAACCAACCAACCAACGACAGCCCCAATCTTCCCATCTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CCA 90 bp | ATCTGGTTAATATTTTTGCATAGGGAGGCAGTGGCTACATTGCCTCTTTGTGGCCTCATGGCGAGCCACTaGTCCACACACAGTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: IWLIFLHREAVATLPLCGLMASH*STHSWW Trigger: CCACCAACTGTGTGTGGACCAGTGGCTCGCCATGAG...GCCACAAAGAGGCAATGTAGCCACTGCCTCCCTATGCAAAAATATTAACCAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 72 bp | GGCTGTCGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTaGGTTCGGTCAGGCACCAAAACAAGAAACTCAATG | + |
Preference number: 4 (lower is better) Translates to: GCRWLVGWLVGW*VRSGTKTRNSM Trigger: CATTGAGTTTCTTGTTTTGGTGCCTGACCGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 72 bp | AAGATTGGGGCTGTCGTTGGTTGGTTGGTTGGTTGGTaGGTTGGTTGGTTCGGTCAGGCACCAAAACAAGAA | + |
Preference number: 4 (lower is better) Translates to: KIGAVVGWLVGW*VGWFGQAPKQE Trigger: TTCTTGTTTTGGTGCCTGACCGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCCCCAATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR GCA 90 bp | GCGGTACAGAAAGCATACACTAATACTGTGTCACTTGGGACTTTCCGTCTCCTTCATCTTTCTTGCCCTTaGTGTCCTGGGGTCTTCGCT | + |
Preference number: 4 (lower is better) Translates to: AVQKAYTNTVSLGTFRLLHLSCP*CPGVFA Trigger: AGCGAAGACCCCAGGACAGCAAGGGCAAGAAAGATG...AAGGAGACGGAAAGTCCCAAGTGACACAGTATTAGTGTATGCTTTCTGTACCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 72 bp | TCAAGAGGTATATACACAATCCCTCAAAGGTCAGGATaGAGGGGCCGATCACCAGCTAGTACCCTCGAGATA | + |
Preference number: 4 (lower is better) Translates to: SRGIYTIPQRSG*RGRSPASTLEI Trigger: TATCTCGAGGGTACTAGCTGGTGATCGGCCCCTCAATCCTGACCTTTGAGGGATTGTGTATATACCTCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 72 bp | TTTTCGCTCATAAAGATGGGAAGATTGGGGCTGTCGTaGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTCG | + |
Preference number: 4 (lower is better) Translates to: FSLIKMGRLGLS*VGWLVGWLVGS Trigger: CGAACCAACCAACCAACCAACCAACCAACCAACCAACGACAGCCCCAATCTTCCCATCTTTATGAGCGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR GCA 90 bp | ATCTGGTTAATATTTTTGCATAGGGAGGCAGTGGCTACATTGCCTCTTTGTGGCAGATGGGGCATTTCTTaGTCATGGCGAGCCACTGGT | + |
Preference number: 4 (lower is better) Translates to: IWLIFLHREAVATLPLCGRWGIS*SWRATG Trigger: ACCAGTGGCTCGCCATGAGCAAGAAATGCCCCATCT...GCCACAAAGAGGCAATGTAGCCACTGCCTCCCTATGCAAAAATATTAACCAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CCA 90 bp | GTTTGTTTGTTTCGCAGTTGTCATCGTACCAACGCATGCAAAGCATTCCACTCCTTGCCCTTGCTGTCCTaGGGTCTTCGCTTCTTATAC | + |
Preference number: 4 (lower is better) Translates to: VCLFRSCHRTNACKAFHSLPLLS*GLRFLY Trigger: GTATAAGAAGCGAAGACCCCAGGACAGCAAGGGCAA...GGAGTGGAATGCTTTGCATGCGTTGGTACGATGACAACTGCGAAACAAACAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CAA 72 bp | CTGGCTGAGGGCAACTCTACAGAGGTGAAGGATGTGTaGATGTTAGGAAGAATCACTGGATGTGTTTTGGGA | + |
Preference number: 4 (lower is better) Translates to: LAEGNSTEVKDV*MLGRITGCVLG Trigger: TCCCAAAACACATCCAGTGATTCTTCCTAACATCAACACATCCTTCACCTCTGTAGAGTTGCCCTCAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR GCA 90 bp | GTTTGTTTGTTTCGCAGTTGTCATCGTACCAACGCATGCAAAGCATTCCACTCCGTGCATTCGAGGAGTTaGCAAGTAATGCTGATAGTG | + |
Preference number: 4 (lower is better) Translates to: VCLFRSCHRTNACKAFHSVHSRS*QVMLIV Trigger: CACTATCAGCATTACTTGGCAACTCCTCGAATGCAC...GGAGTGGAATGCTTTGCATGCGTTGGTACGATGACAACTGCGAAACAAACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CAA 72 bp | GAGCGGTACAGAAAGCATACACTAATACTGTGTCACTaGGGACTTTCCGTCTCCTTTCTCACTAAACCCTCA | + |
Preference number: 4 (lower is better) Translates to: ERYRKHTLILCH*GLSVSFLTKPS Trigger: TGAGGGTTTAGTGAGAAAGGAGACGGAAAGTCCCAAGTGACACAGTATTAGTGTATGCTTTCTGTACCGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 72 bp | TGGTTAATATTTTTGCATAGGGAGGCAGTGGCTACATaGCCTCTTTGTGGCAAGATGAGAGCTCAGGATAGA | + |
Preference number: 4 (lower is better) Translates to: WLIFLHREAVAT*PLCGKMRAQDR Trigger: TCTATCCTGAGCTCTCATCTTGCCACAAAGAGGCAATGTAGCCACTGCCTCCCTATGCAAAAATATTAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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3UTR CAA 72 bp | AGAAAGCAGGATATAATTCTGCTGCTCCCCAAGTTCTaGTCAATGACTGGTATCCTAACCACAAAGGCTCCA | + |
Preference number: 4 (lower is better) Translates to: RKQDIILLLPKF*SMTGILTTKAP Trigger: TGGAGCCTTTGTGGTTAGGATACCAGTCATTGACAAGAACTTGGGGAGCAGCAGAATTATATCCTGCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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3UTR CAA 72 bp | ACAGTAGGACAGCTTGCAATCACACACCCTGATAGTTaGGACAAAATAAAGTTCGCAGACTTTTATTTAAAA | + |
Preference number: 4 (lower is better) Translates to: TVGQLAITHPDS*DKIKFADFYLK Trigger: TTTTAAATAAAAGTCTGCGAACTTTATTTTGTCCAAACTATCAGGGTGTGTGATTGCAAGCTGTCCTACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS TCA 90 bp | GGTGCAGCGTGCCACTGTGCTGGTGGGCCGGGGCCATGTGGGCGCTaGGGCCCGGCTGCGACTGCACGGGGTGGGCCAGCGGGAAGTCCG | + |
Preference number: 5 (lower is better) Translates to: GAACHCAGGPGPCGR*GPAATARGGPAGSP Trigger: CGGACTTCCCGCTGGCCCACCCCGTGCAGTCGCAGCCGGGCCTCAGCGCCCACATGGCCCCGGCCCACCAGCACAGTGGCACGCTGCACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS CCA 90 bp | AGCGACTGGTGCAGCGTGCCACTGTGCTGGTGGGCCGGGGCCATGTaGGCGCTGAGGCCCGGCTGCGACTGCACGGGGTGGGCCAGCGGG | + |
Preference number: 5 (lower is better) Translates to: SDWCSVPLCWWAGAM*ALRPGCDCTGWASG Trigger: CCCGCTGGCCCACCCCGTGCAGTCGCAGCCGGGCCTCAGCGCCCACATGGCCCCGGCCCACCAGCACAGTGGCACGCTGCACCAGTCGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS GCA 90 bp | TGCAGGGTGGGCAGCGGGGTCAGCGACTGGTGCAGCGTGCCACTGTaGTGGTGGGCCGGGGCCATGTGGGCGCTGAGGCCCGGCTGCGAC | + |
Preference number: 5 (lower is better) Translates to: CRVGSGVSDWCSVPL*WWAGAMWALRPGCD Trigger: GTCGCAGCCGGGCCTCAGCGCCCACATGGCCCCGGCCCACCAGCACAGTGGCACGCTGCACCAGTCGCTGACCCCGCTGCCCACCCTGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS CCA 90 bp | GTGGGCAGCGGGGTCAGCGACTGGTGCAGCGTGCCACTGTGCTGGTaGGCCGGGGCCATGTGGGCGCTGAGGCCCGGCTGCGACTGCACG | + |
Preference number: 5 (lower is better) Translates to: VGSGVSDWCSVPLCW*AGAMWALRPGCDCT Trigger: CGTGCAGTCGCAGCCGGGCCTCAGCGCCCACATGGCCCCGGCCCACCAGCACAGTGGCACGCTGCACCAGTCGCTGACCCCGCTGCCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS GCA 90 bp | GTGACGTCCTGGAACTGCAGGGTGGGCAGCGGGGTCAGCGACTGGTaGAGCGTGCCACTGTGCTGGTGGGCCGGGGCCATGTGGGCGCTG | + |
Preference number: 5 (lower is better) Translates to: VTSWNCRVGSGVSDW*SVPLCWWAGAMWAL Trigger: CAGCGCCCACATGGCCCCGGCCCACCAGCACAGTGGCACGCTGCACCAGTCGCTGACCCCGCTGCCCACCCTGCAGTTCCAGGACGTCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS CCA 90 bp | GATACCGGGGCTGAGGTGTCTGCAGTTGGTGGCCAAAGTCGAAGCTaGGGTGAAGGCGGTGGGGGTGGACAGACACTCGATCCTGATTCC | + |
Preference number: 5 (lower is better) Translates to: DTGAEVSAVGGQSRS*GEGGGGGQTLDPDS Trigger: GGAATCAGGATCGAGTGTCTGTCCACCCCCACCGCCTTCACCCCAGCTTCGACTTTGGCCACCAACTGCAGACACCTCAGCCCCGGTATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS CCA 90 bp | GGTGCATTCGAGGAGTTGCCAAGTAATGCTGATAGTGCTGAGGGATaGGCCGCACCTGGAACTGGGCAGGACTCAAGCCGGCGTCCACAC | + |
Preference number: 5 (lower is better) Translates to: GAFEELPSNADSAEG*AAPGTGQDSSRRPH Trigger: GTGTGGACGCCGGCTTGAGTCCTGCCCAGTTCCAGGTGCGGCCCATCCCTCAGCACTATCAGCATTACTTGGCAACTCCTCGAATGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CAA 90 bp | AAAGAGTTTAAGAATGCTTGCACGGAGGCTGGGGGCCTTTGCGGGAGAGGAGCTCTGCTGCAGCAGGTATaGCTGGTGCAGGGCCTGAGG | + |
Preference number: 5 (lower is better) Translates to: KEFKNACTEAGGLCGRGALLQQV*LVQGLR Trigger: CCTCAGGCCCTGCACCAGCAATACCTGCTGCAGCAG...AGCTCCTCTCCCGCAAAGGCCCCCAGCCTCCGTGCAAGCATTCTTAAACTCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CAA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCAGATGGGGCATTTCTaGCTCATGGCGAGCCACTGG | + |
Preference number: 5 (lower is better) Translates to: YARAGDETQGGPDRRCYSQMGHF*LMASHW Trigger: CCAGTGGCTCGCCATGAGCAAGAAATGCCCCATCTG...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CAA 90 bp | CAGCTGCACAGCAAGGCGATGAGGCAGTCACCATTCCTGATGGGTGGGTCTTCCTCATCTTTCTTGCCCTaGCTGTCCTGGGGTCTTCGC | + |
Preference number: 5 (lower is better) Translates to: QLHSKAMRQSPFLMGGSSSSFLP*LSWGLR Trigger: GCGAAGACCCCAGGACAGCAAGGGCAAGAAAGATGA...GGAAGACCCACCCATCAGGAATGGTGACTGCCTCATCGCCTTGCTGTGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CAA 90 bp | TACGCGCGCGCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCTCATCTTTCTTGCCCTaGCTGTCCTGGGGTCTTCGC | + |
Preference number: 5 (lower is better) Translates to: YARAGDETQGGPDRRCYSSSFLP*LSWGLR Trigger: GCGAAGACCCCAGGACAGCAAGGGCAAGAAAGATGA...GCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGCGCGCGCGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CAA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGCTGGTCCACACACAGTaGGTGGAAGAGATGCATACA | + |
Preference number: 5 (lower is better) Translates to: AGDETQGGPDRRCYSPTRLVHTQ*VEEMHT Trigger: TGTATGCATCTCTTCCACCAACTGTGTGTGGACCAG...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS GCA 90 bp | CTGTGTGGACGAGGAGTTTCTCGGGAAGTGGTGCATTCGAGGAGTTaGCAAGTAATGCTGATAGTGCTGAGGGATGGGCCGCACCTGGAA | + |
Preference number: 5 (lower is better) Translates to: LCGRGVSREVVHSRS*QVMLIVLRDGPHLE Trigger: TTCCAGGTGCGGCCCATCCCTCAGCACTATCAGCATTACTTGGCAACTCCTCGAATGCACCACTTCCCGAGAAACTCCTCGTCCACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CAA 90 bp | GCAGGAGATGAAACACAAGGGGGACCTGACAGACGTTGCTACAGCCCCACGCGGGGTGCATTCGAGGAGTaGCCAAGTAATGCTGATAGT | + |
Preference number: 5 (lower is better) Translates to: AGDETQGGPDRRCYSPTRGAFEE*PSNADS Trigger: ACTATCAGCATTACTTGGCAACTCCTCGAATGCACC...CCGCGTGGGGCTGTAGCAACGTCTGTCAGGTCCCCCTTGTGTTTCATCTCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS CCA 90 bp | ATGTCCACTCGGCAGATGGGGCATTTCTTGCTCATGGCGAGCCACTaGTCCACACACAGTTGGTGGAAGAGATGCATACAAGGTAGGCGT | + |
Preference number: 5 (lower is better) Translates to: MSTRQMGHFLLMASH*STHSWWKRCIQGRR Trigger: ACGCCTACCTTGTATGCATCTCTTCCACCAACTGTGTGTGGACCAGTGGCTCGCCATGAGCAAGAAATGCCCCATCTGCCGAGTGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS TCA 90 bp | CCTTGCTGTCCTGGGGTCTTCGCTTCTTATACTTGTGGGGGAAGGTaGATCTCTCAATGGTGTTCTGTACAGCGCCTCGGGTCACGTTTC | + |
Preference number: 5 (lower is better) Translates to: PCCPGVFASYTCGGR*ISQWCSVQRLGSRF Trigger: GAAACGTGACCCGAGGCGCTGTACAGAACACCATTGAGAGATTCACCTTCCCCCACAAGTATAAGAAGCGAAGACCCCAGGACAGCAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS CCA 90 bp | ATGGGGCATTTCTTGCTCATGGCGAGCCACTGGTCCACACACAGTTaGTGGAAGAGATGCATACAAGGTAGGCGTCTCACATCTTCCCCA | + |
Preference number: 5 (lower is better) Translates to: MGHFLLMASHWSTHS*WKRCIQGRRLTSSP Trigger: TGGGGAAGATGTGAGACGCCTACCTTGTATGCATCTCTTCCACCAACTGTGTGTGGACCAGTGGCTCGCCATGAGCAAGAAATGCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CAA 90 bp | CCATCAGAGGAGCAGCAGGAAAGAAGTCACAAGTTCTTGTGGCTTTTGGTCGGCTCCCCTTCATCTTTCTaGCCCTTGCTGTCCTGGGGT | + |
Preference number: 5 (lower is better) Translates to: PSEEQQERSHKFLWLLVGSPSSF*PLLSWG Trigger: ACCCCAGGACAGCAAGGGCAAGAAAGATGAAGGGGA...GCCGACCAAAAGCCACAAGAACTTGTGACTTCTTTCCTGCTGCTCCTCTGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS GCA 90 bp | TTGCTCATGGCGAGCCACTGGTCCACACACAGTTGGTGGAAGAGATaGATACAAGGTAGGCGTCTCACATCTTCCCCATCCTCCAACATA | + |
Preference number: 5 (lower is better) Translates to: LLMASHWSTHSWWKR*IQGRRLTSSPSSNI Trigger: TATGTTGGAGGATGGGGAAGATGTGAGACGCCTACCTTGTATGCATCTCTTCCACCAACTGTGTGTGGACCAGTGGCTCGCCATGAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CAA 90 bp | CCATTGGGATGGGGTTGGGGATTTCCAGCATCTCCCAGTTTGCCAGTGAAGAGCCTTCGCTTCTTATACTaGTGGGGGAAGGTGAATCTC | + |
Preference number: 5 (lower is better) Translates to: PLGWGWGFPASPSLPVKSLRFLY*WGKVNL Trigger: GAGATTCACCTTCCCCCACAAGTATAAGAAGCGAAG...GCTCTTCACTGGCAAACTGGGAGATGCTGGAAATCCCCAACCCCATCCCAATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CAA 90 bp | CGGTTAGGAGGCCCAACTTGTCAAAGGCACTCATGCGTCTCAGTCAGAAAAGGGCTGGTCCACACACAGTaGGTGGAAGAGATGCATACA | + |
Preference number: 5 (lower is better) Translates to: RLGGPTCQRHSCVSVRKGLVHTQ*VEEMHT Trigger: TGTATGCATCTCTTCCACCAACTGTGTGTGGACCAG...CCCTTTTCTGACTGAGACGCATGAGTGCCTTTGACAAGTTGGGCCTCCTAACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CAA 90 bp | CATAAAGATGGGAAGATTGGGGCTGTCGTTGGTTGGTTGGTTGGTTGGTTGGTTTCCCCTTCATCTTTCTaGCCCTTGCTGTCCTGGGGT | + |
Preference number: 5 (lower is better) Translates to: HKDGKIGAVVGWLVGWLVSPSSF*PLLSWG Trigger: ACCCCAGGACAGCAAGGGCAAGAAAGATGAAGGGGA...AACCAACCAACCAACCAACCAACCAACGACAGCCCCAATCTTCCCATCTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS-3UTR CAA 90 bp | TCTACGTGGTCAAGAGGTATATACACAATCCCTCAAAGGTCAGGATTGAGGGGCAGGATGCTGAGACCTTaGAAAGGGGGCACCTCTGTT | + |
Preference number: 5 (lower is better) Translates to: STWSRGIYTIPQRSGLRGRMLRP*KGGTSV Trigger: AACAGAGGTGCCCCCTTTCAAAGGTCTCAGCATCCT...GCCCCTCAATCCTGACCTTTGAGGGATTGTGTATATACCTCTTGACCACGTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS-3UTR CAA 90 bp | ATCTGGTTAATATTTTTGCATAGGGAGGCAGTGGCTACATTGCCTCTTTGTGGCCTGAGGTGTCTGCAGTaGGTGGCCAAAGTCGAAGCT | + |
Preference number: 5 (lower is better) Translates to: IWLIFLHREAVATLPLCGLRCLQ*VAKVEA Trigger: AGCTTCGACTTTGGCCACCAACTGCAGACACCTCAG...GCCACAAAGAGGCAATGTAGCCACTGCCTCCCTATGCAAAAATATTAACCAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS TCA 72 bp | TGCCACTGTGCTGGTGGGCCGGGGCCATGTGGGCGCTaGGGCCCGGCTGCGACTGCACGGGGTGGGCCAGCG | + |
Preference number: 6 (lower is better) Translates to: CHCAGGPGPCGR*GPAATARGGPA Trigger: CGCTGGCCCACCCCGTGCAGTCGCAGCCGGGCCTCAGCGCCCACATGGCCCCGGCCCACCAGCACAGTGGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS CCA 72 bp | GGGGTCAGCGACTGGTGCAGCGTGCCACTGTGCTGGTaGGCCGGGGCCATGTGGGCGCTGAGGCCCGGCTGC | + |
Preference number: 6 (lower is better) Translates to: GVSDWCSVPLCW*AGAMWALRPGC Trigger: GCAGCCGGGCCTCAGCGCCCACATGGCCCCGGCCCACCAGCACAGTGGCACGCTGCACCAGTCGCTGACCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS GCA 72 bp | TGGAACTGCAGGGTGGGCAGCGGGGTCAGCGACTGGTaGAGCGTGCCACTGTGCTGGTGGGCCGGGGCCATG | + |
Preference number: 6 (lower is better) Translates to: WNCRVGSGVSDW*SVPLCWWAGAM Trigger: CATGGCCCCGGCCCACCAGCACAGTGGCACGCTGCACCAGTCGCTGACCCCGCTGCCCACCCTGCAGTTCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS CCA 72 bp | GCTGAGGTGTCTGCAGTTGGTGGCCAAAGTCGAAGCTaGGGTGAAGGCGGTGGGGGTGGACAGACACTCGAT | + |
Preference number: 6 (lower is better) Translates to: AEVSAVGGQSRS*GEGGGGGQTLD Trigger: ATCGAGTGTCTGTCCACCCCCACCGCCTTCACCCCAGCTTCGACTTTGGCCACCAACTGCAGACACCTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS CAA 72 bp | GTGGCGGCAGGAGGTAGCGTGAGGATGCTGAGACCTTaGAAAGGGGGCACCTCTGTTTCGCACAGAGCCAAA | + |
Preference number: 6 (lower is better) Translates to: VAAGGSVRMLRP*KGGTSVSHRAK Trigger: TTTGGCTCTGTGCGAAACAGAGGTGCCCCCTTTCAAAGGTCTCAGCATCCTCACGCTACCTCCTGCCGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS CCA 72 bp | AAAGGGGGCACCTCTGTTTCGCACAGAGCCAAACACTaGAAGCACGAGATAGCCGACGTGGACCAGGACCAT | + |
Preference number: 6 (lower is better) Translates to: KGGTSVSHRAKH*KHEIADVDQDH Trigger: ATGGTCCTGGTCCACGTCGGCTATCTCGTGCTTCCAGTGTTTGGCTCTGTGCGAAACAGAGGTGCCCCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS CAA 90 bp | TCTGTGTGGACGAGGAGTTTCTCGGGAAGTGGTGCATTCGAGGAGTaGCCAAGTAATGCTGATAGTGCTGAGGGATGGGCCGCACCTGGA | + |
Preference number: 6 (lower is better) Translates to: SVWTRSFSGSGAFEE*PSNADSAEGWAAPG Trigger: TCCAGGTGCGGCCCATCCCTCAGCACTATCAGCATTACTTGGCAACTCCTCGAATGCACCACTTCCCGAGAAACTCCTCGTCCACACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS GCA 72 bp | CGAGGAGTTTCTCGGGAAGTGGTGCATTCGAGGAGTTaGCAAGTAATGCTGATAGTGCTGAGGGATGGGCCG | + |
Preference number: 6 (lower is better) Translates to: RGVSREVVHSRS*QVMLIVLRDGP Trigger: CGGCCCATCCCTCAGCACTATCAGCATTACTTGGCAACTCCTCGAATGCACCACTTCCCGAGAAACTCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS GCA 72 bp | GCGAGCCACTGGTCCACACACAGTTGGTGGAAGAGATaGATACAAGGTAGGCGTCTCACATCTTCCCCATCC | + |
Preference number: 6 (lower is better) Translates to: ASHWSTHSWWKR*IQGRRLTSSPS Trigger: GGATGGGGAAGATGTGAGACGCCTACCTTGTATGCATCTCTTCCACCAACTGTGTGTGGACCAGTGGCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS TCA 72 bp | CCTGGGGTCTTCGCTTCTTATACTTGTGGGGGAAGGTaGATCTCTCAATGGTGTTCTGTACAGCGCCTCGGG | + |
Preference number: 6 (lower is better) Translates to: PGVFASYTCGGR*ISQWCSVQRLG Trigger: CCCGAGGCGCTGTACAGAACACCATTGAGAGATTCACCTTCCCCCACAAGTATAAGAAGCGAAGACCCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS CCA 72 bp | CGGCAGATGGGGCATTTCTTGCTCATGGCGAGCCACTaGTCCACACACAGTTGGTGGAAGAGATGCATACAA | + |
Preference number: 6 (lower is better) Translates to: RQMGHFLLMASH*STHSWWKRCIQ Trigger: TTGTATGCATCTCTTCCACCAACTGTGTGTGGACCAGTGGCTCGCCATGAGCAAGAAATGCCCCATCTGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |
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CDS CAA 72 bp | ACGAGGAGTTTCTCGGGAAGTGGTGCATTCGAGGAGTaGCCAAGTAATGCTGATAGTGCTGAGGGATGGGCC | + |
Preference number: 6 (lower is better) Translates to: TRSFSGSGAFEE*PSNADSAEGWA Trigger: GGCCCATCCCTCAGCACTATCAGCATTACTTGGCAACTCCTCGAATGCACCACTTCCCGAGAAACTCCTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026494.14 |
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CDS CCA 72 bp | CCCTTGCTGTCCTGGGGTCTTCGCTTCTTATACTTGTaGGGGAAGGTGAATCTCTCAATGGTGTTCTGTACA | + |
Preference number: 6 (lower is better) Translates to: PLLSWGLRFLYL*GKVNLSMVFCT Trigger: TGTACAGAACACCATTGAGAGATTCACCTTCCCCCACAAGTATAAGAAGCGAAGACCCCAGGACAGCAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026494.14 ENSMUST00000182024.2 |