Pregenerated sensors for RNF152 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047496Ensembl transcript IDs: ENSMUST00000058688.7, ENSMUST00000172299.2
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGGAAAGATCCAGGCACCGGCCAGGAGGCTGGTGTTGTAGACACTTaGCTTATGCACGCCCACAAAGTCTTACTCCCAGGATTCTTCAGG | + |
Preference number: 1 (lower is better) Translates to: GKDPGTGQEAGVVDT*LMHAHKVLLPGFFR Trigger: CCTGAAGAATCCTGGGAGTAAGACTTTGTGGGCGTGCATAAGCCAAGTGTCTACAACACCAGCCTCCTGGCCGGTGCCTGGATCTTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 90 bp | GTTGGAGGTGATGTGGGGGAAAGATCCAGGCACCGGCCAGGAGGCTaGTGTTGTAGACACTTGGCTTATGCACGCCCACAAAGTCTTACT | + |
Preference number: 1 (lower is better) Translates to: VGGDVGERSRHRPGG*CCRHLAYARPQSLT Trigger: AGTAAGACTTTGTGGGCGTGCATAAGCCAAGTGTCTACAACACCAGCCTCCTGGCCGGTGCCTGGATCTTTCCCCCACATCACCTCCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR TCA 90 bp | ACATGGGATCACTATACACAGCAAAGTGCAAGTGGATGTTGGAGGTaGTGTGGGGGAAAGATCCAGGCACCGGCCAGGAGGCTGGTGTTG | + |
Preference number: 1 (lower is better) Translates to: TWDHYTQQSASGCWR*CGGKIQAPARRLVL Trigger: CAACACCAGCCTCCTGGCCGGTGCCTGGATCTTTCCCCCACATCACCTCCAACATCCACTTGCACTTTGCTGTGTATAGTGATCCCATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR TCA 90 bp | CTATCTATTCAGAGCCCAGGGTTTTGTCTGTACCATTCCCTCAGGTaGGGCTCCTTGGCAATGGGATGGCTAAGTCCACCTAGCCAACAG | + |
Preference number: 1 (lower is better) Translates to: LSIQSPGFCLYHSLR*GSLAMGWLSPPSQQ Trigger: CTGTTGGCTAGGTGGACTTAGCCATCCCATTGCCAAGGAGCCTCACCTGAGGGAATGGTACAGACAAAACCCTGGGCTCTGAATAGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 90 bp | CAGCTGCAACTGCTGTCCCTGCCACTGGCATGTGATTCTAAGCCCTaGCTGCTTGCCCCACATGAGATAGATAAAGTTTTAGTGTTGTGG | + |
Preference number: 1 (lower is better) Translates to: QLQLLSLPLACDSKP*LLAPHEIDKVLVLW Trigger: CCACAACACTAAAACTTTATCTATCTCATGTGGGGCAAGCAGCCAGGGCTTAGAATCACATGCCAGTGGCAGGGACAGCAGTTGCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 90 bp | AGACCAGCCCCAAAGAGAGTGCTCCCTATTGAAGGGCTGCAGAATTaGAAACTCAGCCCAATTCTGTTCCATCAAAGCAAGCACAGTTGG | + |
Preference number: 1 (lower is better) Translates to: RPAPKRVLPIEGLQN*KLSPILFHQSKHSW Trigger: CCAACTGTGCTTGCTTTGATGGAACAGAATTGGGCTGAGTTTCCAATTCTGCAGCCCTTCAATAGGGAGCACTCTCTTTGGGGCTGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR GCA 90 bp | CACAGCAGGACACGGGTCTTGTCTTCTTGCTATAGAATTACAACCTaGACACTACTGCTCTCTACATACCCCAATGAGCTCATCTGCAAG | + |
Preference number: 1 (lower is better) Translates to: HSRTRVLSSCYRITT*TLLLSTYPNELICK Trigger: CTTGCAGATGAGCTCATTGGGGTATGTAGAGAGCAGTAGTGTGCAGGTTGTAATTCTATAGCAAGAAGACAAGACCCGTGTCCTGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR TCA 90 bp | TCCACCATTTCAGGGATTCAACAGAACAGCAGGGAGGAACACAGCTaGGTGGAGTCCTTGACAAACATCACTCATTCCACAAACAGAGTT | + |
Preference number: 1 (lower is better) Translates to: STISGIQQNSREEHS*VESLTNITHSTNRV Trigger: AACTCTGTTTGTGGAATGAGTGATGTTTGTCAAGGACTCCACTCAGCTGTGTTCCTCCCTGCTGTTCTGTTGAATCCCTGAAATGGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR TCA 90 bp | TCCAGCCTGGCACCCACATATGCCCACACCAAATACATGACAAACTaGCTGACTTCAAGGGCAAATAGAAACACTGTAAACACCGCAATG | + |
Preference number: 1 (lower is better) Translates to: SSLAPTYAHTKYMTN*LTSRANRNTVNTAM Trigger: CATTGCGGTGTTTACAGTGTTTCTATTTGCCCTTGAAGTCAGTCAGTTTGTCATGTATTTGGTGTGGGCATATGTGGGTGCCAGGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR GCA 90 bp | TCTCACTCTAAAAGTGGTACCTTGTTCCAGCCTGGCACCCACATATaGCCACACCAAATACATGACAAACTGACTGACTTCAAGGGCAAA | + |
Preference number: 1 (lower is better) Translates to: SHSKSGTLFQPGTHI*PHQIHDKLTDFKGK Trigger: TTTGCCCTTGAAGTCAGTCAGTTTGTCATGTATTTGGTGTGGGCATATGTGGGTGCCAGGCTGGAACAAGGTACCACTTTTAGAGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 90 bp | TTGGCCACAAGACCCTACACACACTTTCACAGCACAGGTCATGCATaGCTTGCAAGTCAAAAATTTTACAGCTACTGTCTAGCTATGAGC | + |
Preference number: 1 (lower is better) Translates to: LATRPYTHFHSTGHA*LASQKFYSYCLAMS Trigger: GCTCATAGCTAGACAGTAGCTGTAAAATTTTTGACTTGCAAGCCATGCATGACCTGTGCTGTGAAAGTGTGTGTAGGGTCTTGTGGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR GCA 90 bp | TGTTTTATTTCACTGCAAAGTCATCACTTTAGCACACGTCTGTTGTaGAGCTTGAAGATGAAGGCCAGCAGGCCAATCATGCTTCCATGT | + |
Preference number: 1 (lower is better) Translates to: CFISLQSHHFSTRLL*SLKMKASRPIMLPC Trigger: ACATGGAAGCATGATTGGCCTGCTGGCCTTCATCTTCAAGCTGCACAACAGACGTGTGCTAAAGTGATGACTTTGCAGTGAAATAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR GCA 90 bp | CACAAGACCCTACACACACTTTCACAGCACAGGTCATGCATGGCTTaGAAGTCAAAAATTTTACAGCTACTGTCTAGCTATGAGCTTTGG | + |
Preference number: 1 (lower is better) Translates to: HKTLHTLSQHRSCMA*KSKILQLLSSYELW Trigger: CCAAAGCTCATAGCTAGACAGTAGCTGTAAAATTTTTGACTTGCAAGCCATGCATGACCTGTGCTGTGAAAGTGTGTGTAGGGTCTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR TCA 90 bp | TTGGGCTTCCAGCTTAACAAGCACAGAGCAAGCTTAAATCACAGATaGAGAGAAATGAAGGAACTTGGCAAAGCACAACACACTGAAGAC | + |
Preference number: 1 (lower is better) Translates to: LGFQLNKHRASLNHR*REMKELGKAQHTED Trigger: GTCTTCAGTGTGTTGTGCTTTGCCAAGTTCCTTCATTTCTCTTCATCTGTGATTTAAGCTTGCTCTGTGCTTGTTAAGCTGGAAGCCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR GCA 90 bp | GGAAGGGACAGGAGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTaGCAGACTATCGGCTACAGTCTGAGTTTTATACGGAATGTATCT | + |
Preference number: 1 (lower is better) Translates to: GRDRRSLNQNLSREG*QTIGYSLSFIRNVS Trigger: AGATACATTCCGTATAAAACTCAGACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCTCCTGTCCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 90 bp | AACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTaGACAAGAATTTCTACACTGCCCGGCAGCTCATTTATCTGTAGG | + |
Preference number: 1 (lower is better) Translates to: NSSLISPMKSVFGNI*TRISTLPGSSFICR Trigger: CCTACAGATAAATGAGCTGCCGGGCAGTGTAGAAATTCTTGTCCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 90 bp | CCGATTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTaGCAACATTTGGACAAGAATTTCTACACTGCCCGGCAGCTCATT | + |
Preference number: 1 (lower is better) Translates to: PINKQQLDIPYEVSI*QHLDKNFYTARQLI Trigger: AATGAGCTGCCGGGCAGTGTAGAAATTCTTGTCCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAATCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR TCA 90 bp | CCAAAAGTTCTATCAAACAGGACTGACTTAGAAAATTCCAAGAGCTaGACTAGCATACAGCTGAAACTCCAATGGATCCACTCTGTGAGT | + |
Preference number: 1 (lower is better) Translates to: PKVLSNRTDLENSKS*TSIQLKLQWIHSVS Trigger: ACTCACAGAGTGGATCCATTGGAGTTTCAGCTGTATGCTAGTTCAGCTCTTGGAATTTTCTAAGTCAGTCCTGTTTGATAGAACTTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR TCA 90 bp | TCACAGATGAAGAGAAATGAAGGAACTTGGCAAAGCACAACACACTaGAGACATGTGTGCAAATATTTTCTTCAAACAGCCAAAAGGTCT | + |
Preference number: 1 (lower is better) Translates to: SQMKRNEGTWQSTTH*RHVCKYFLQTAKRS Trigger: AGACCTTTTGGCTGTTTGAAGAAAATATTTGCACACATGTCTTCAGTGTGTTGTGCTTTGCCAAGTTCCTTCATTTCTCTTCATCTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 90 bp | TTTACTGACATGGGATCACTATACACAGCAAAGTGCAAGTGGATGTaGGAGGTGATGTGGGGGAAAGATCCAGGCACCGGCCAGGAGGCT | + |
Preference number: 2 (lower is better) Translates to: FTDMGSLYTAKCKWM*EVMWGKDPGTGQEA Trigger: AGCCTCCTGGCCGGTGCCTGGATCTTTCCCCCACATCACCTCCAACATCCACTTGCACTTTGCTGTGTATAGTGATCCCATGTCAGTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 90 bp | CTCCTTCTCTGGGCATGTCTGTCTATCTATTCAGAGCCCAGGGTTTaGTCTGTACCATTCCCTCAGGTGAGGCTCCTTGGCAATGGGATG | + |
Preference number: 2 (lower is better) Translates to: LLLWACLSIYSEPRV*SVPFPQVRLLGNGM Trigger: CATCCCATTGCCAAGGAGCCTCACCTGAGGGAATGGTACAGACAAAACCCTGGGCTCTGAATAGATAGACAGACATGCCCAGAGAAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | ACAAGACCCTACACACACTTTCACAGCACAGGTCATGCATGGCTTGCAAGTCAAGAGCCTCCTTTCAGCTaGAACTGCTGTCCCTGCCAC | + |
Preference number: 2 (lower is better) Translates to: TRPYTHFHSTGHAWLASQEPPFS*NCCPCH Trigger: GTGGCAGGGACAGCAGTTGCAGCTGAAAGGAGGCTC...TTGACTTGCAAGCCATGCATGACCTGTGCTGTGAAAGTGTGTGTAGGGTCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGCACCGGCCAGGAGGCTaGTGTTGTAGACACTTGGCT | + |
Preference number: 2 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVHRPGG*CCRHLA Trigger: AGCCAAGTGTCTACAACACCAGCCTCCTGGCCGGTG...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAACACCGGCCAGGAGGCTaGTGTTGTAGACACTTGGCT | + |
Preference number: 2 (lower is better) Translates to: TLPGSSFICRAIWPFQRKHRPGG*CCRHLA Trigger: AGCCAAGTGTCTACAACACCAGCCTCCTGGCCGGTG...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAAATCGTCCTGGACATGTaGGGGGCAGGATCCTGGTTT | + |
Preference number: 2 (lower is better) Translates to: TLPGSSFICRAIWPFQRKIVLDM*GAGSWF Trigger: AAACCAGGATCCTGCCCCCCACATGTCCAGGACGAT...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TGGAAACTCAGCCCAATTCTGTTCCATCAAAGCAAGCACAGTTGGCTTCCACTAATCGTCCTGGACATGTaGGGGGCAGGATCCTGGTTT | + |
Preference number: 2 (lower is better) Translates to: WKLSPILFHQSKHSWLPLIVLDM*GAGSWF Trigger: AAACCAGGATCCTGCCCCCCACATGTCCAGGACGAT...TAGTGGAAGCCAACTGTGCTTGCTTTGATGGAACAGAATTGGGCTGAGTTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 90 bp | TTTGGCCAACAAGTTGAAGACCAGCCCCAAAGAGAGTGCTCCCTATaGAAGGGCTGCAGAATTGGAAACTCAGCCCAATTCTGTTCCATC | + |
Preference number: 2 (lower is better) Translates to: FGQQVEDQPQRECSL*KGCRIGNSAQFCSI Trigger: GATGGAACAGAATTGGGCTGAGTTTCCAATTCTGCAGCCCTTCAATAGGGAGCACTCTCTTTGGGGCTGGTCTTCAACTTGTTGGCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAATTCCAGGGCTGCTTCTaGCCTTGCTTAGATCCTGTG | + |
Preference number: 2 (lower is better) Translates to: TLPGSSFICRAIWPFQRKFQGCF*PCLDPV Trigger: CACAGGATCTAAGCAAGGTCAGAAGCAGCCCTGGAA...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | ACTGACATGGGATCACTATACACAGCAAAGTGCAAGTGGATGTTGGAGGTGATGTCCCTGTCCATCACTTaGCTGTTGGGCTTCCAGCTT | + |
Preference number: 2 (lower is better) Translates to: TDMGSLYTAKCKWMLEVMSLSIT*LLGFQL Trigger: AAGCTGGAAGCCCAACAGGCAAGTGATGGACAGGGA...CATCACCTCCAACATCCACTTGCACTTTGCTGTGTATAGTGATCCCATGTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TGGAAACTCAGCCCAATTCTGTTCCATCAAAGCAAGCACAGTTGGCTTCCACTAATGTTGGAGGTGATGTaGGGGAAAGATCCAGGCACC | + |
Preference number: 2 (lower is better) Translates to: WKLSPILFHQSKHSWLPLMLEVM*GKDPGT Trigger: GGTGCCTGGATCTTTCCCCCACATCACCTCCAACAT...TAGTGGAAGCCAACTGTGCTTGCTTTGATGGAACAGAATTGGGCTGAGTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 90 bp | ATTTCACTGCAAAGTCATCACTTTAGCACACGTCTGTTGTGCAGCTaGAAGATGAAGGCCAGCAGGCCAATCATGCTTCCATGTTCCAGG | + |
Preference number: 2 (lower is better) Translates to: ISLQSHHFSTRLLCS*KMKASRPIMLPCSR Trigger: CCTGGAACATGGAAGCATGATTGGCCTGCTGGCCTTCATCTTCAAGCTGCACAACAGACGTGTGCTAAAGTGATGACTTTGCAGTGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAACACTCACTGATGCAGTaGTTCGGTTGGGAAAGAGCT | + |
Preference number: 2 (lower is better) Translates to: TLPGSSFICRAIWPFQRKHSLMQ*FGWERA Trigger: AGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTG...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | AAGACGACATATGAAGTGCCATACTTGGCTCTACTTAACACGGTAAGCATTCTCCCTTTCAGCTGCAACTaGTGTCCCTGCCACTGGCAT | + |
Preference number: 2 (lower is better) Translates to: KTTYEVPYLALLNTVSILPFSCN*CPCHWH Trigger: ATGCCAGTGGCAGGGACAGCAGTTGCAGCTGAAAGG...GAGAATGCTTACCGTGTTAAGTAGAGCCAAGTATGGCACTTCATATGTCGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACAATGTTGGAGGTGATGTaGGGGAAAGATCCAGGCACC | + |
Preference number: 2 (lower is better) Translates to: LAKTPSITERASRKAFKTMLEVM*GKDPGT Trigger: GGTGCCTGGATCTTTCCCCCACATCACCTCCAACAT...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGACAGCAAAGTGCAAGTaGATGTTGGAGGTGATGTGG | + |
Preference number: 2 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVTAKCK*MLEVMW Trigger: CCACATCACCTCCAACATCCACTTGCACTTTGCTGT...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGAGCAGCCTGAGAGTTTaGGAAATTGATGCTAACCCA | + |
Preference number: 2 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVSSLRV*EIDANP Trigger: TGGGTTAGCATCAATTTCTCAAACTCTCAGGCTGCT...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACACCTGGCACCCACATATaGCCACACCAAATACATGAC | + |
Preference number: 2 (lower is better) Translates to: LAKTPSITERASRKAFKTPGTHI*PHQIHD Trigger: GTCATGTATTTGGTGTGGGCATATGTGGGTGCCAGG...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAACCAACTTCCCCAGACTaGTGGCAATTTCCATACCTA | + |
Preference number: 2 (lower is better) Translates to: TLPGSSFICRAIWPFQRKPTSPD*WQFPYL Trigger: TAGGTATGGAAATTGCCAGCAGTCTGGGGAAGTTGG...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | ACAAGACCCTACACACACTTTCACAGCACAGGTCATGCATGGCTTGCAAGTCAATTGAAACTGTTCTCCTaGGATCTTGCTGAGACCTCA | + |
Preference number: 2 (lower is better) Translates to: TRPYTHFHSTGHAWLASQLKLFS*DLAETS Trigger: TGAGGTCTCAGCAAGATCCCAGGAGAACAGTTTCAA...TTGACTTGCAAGCCATGCATGACCTGTGCTGTGAAAGTGTGTGTAGGGTCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | ACTGACATGGGATCACTATACACAGCAAAGTGCAAGTGGATGTTGGAGGTGATGCACAGGAGCCAGCTCTaGGTCTTCACTGTTTTTGTT | + |
Preference number: 2 (lower is better) Translates to: TDMGSLYTAKCKWMLEVMHRSQL*VFTVFV Trigger: AACAAAAACAGTGAAGACCCAGAGCTGGCTCCTGTG...CATCACCTCCAACATCCACTTGCACTTTGCTGTGTATAGTGATCCCATGTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | GCAGTGAACAGAGAAAAATCAAAAGACATTGGCTGGAACAAGCAAGACAAGAGAAGGGAGGAACACAGCTaGGTGGAGTCCTTGACAAAC | + |
Preference number: 2 (lower is better) Translates to: AVNREKSKDIGWNKQDKRREEHS*VESLTN Trigger: GTTTGTCAAGGACTCCACTCAGCTGTGTTCCTCCCT...TCTCTTGTCTTGCTTGTTCCAGCCAATGTCTTTTGATTTTTCTCTGTTCACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCACACTCACTGATGCAGTaGTTCGGTTGGGAAAGAGCT | + |
Preference number: 2 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSHSLMQ*FGWERA Trigger: AGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTG...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAAAGTGACCAGTCCCTTTaGAAAGCTCCTGTTAGAGTA | + |
Preference number: 2 (lower is better) Translates to: TLPGSSFICRAIWPFQRKSDQSL*KAPVRV Trigger: TACTCTAACAGGAGCTTTTCAAAGGGACTGGTCACT...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCAGCACACGTCTGTTGTaGAGCTTGAAGATGAAGGCC | + |
Preference number: 2 (lower is better) Translates to: FHSKERSKVHLYVLHGQLSTRLL*SLKMKA Trigger: GGCCTTCATCTTCAAGCTGCACAACAGACGTGTGCT...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TGGAAACTCAGCCCAATTCTGTTCCATCAAAGCAAGCACAGTTGGCTTCCACTATTGAAACTGTTCTCCTaGGATCTTGCTGAGACCTCA | + |
Preference number: 2 (lower is better) Translates to: WKLSPILFHQSKHSWLPLLKLFS*DLAETS Trigger: TGAGGTCTCAGCAAGATCCCAGGAGAACAGTTTCAA...TAGTGGAAGCCAACTGTGCTTGCTTTGATGGAACAGAATTGGGCTGAGTTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCACCATCACTTGCCTGTTaGGCTTCCAGCTTAACAAGC | + |
Preference number: 2 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSPSLAC*ASSLTS Trigger: GCTTGTTAAGCTGGAAGCCCAACAGGCAAGTGATGG...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCCAAGTATATAGAAGTTaGCAGGCCTCCTTGCCCCCT | + |
Preference number: 2 (lower is better) Translates to: FHSKERSKVHLYVLHGQLQVYRS*QASLPP Trigger: AGGGGGCAAGGAGGCCTGCCAACTTCTATATACTTG...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | AAGACGACATATGAAGTGCCATACTTGGCTCTACTTAACACGGTAAGCATTCTCCAAGTATATAGAAGTTaGCAGGCCTCCTTGCCCCCT | + |
Preference number: 2 (lower is better) Translates to: KTTYEVPYLALLNTVSILQVYRS*QASLPP Trigger: AGGGGGCAAGGAGGCCTGCCAACTTCTATATACTTG...GAGAATGCTTACCGTGTTAAGTAGAGCCAAGTATGGCACTTCATATGTCGTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 90 bp | GCATGCTTGATTGTGGATTTCCCACTCACTGATGCAGTGATTCGGTaGGGAAAGAGCTCAAAAGTGAACTGGGATTTCATCAGACTCTTA | + |
Preference number: 2 (lower is better) Translates to: ACLIVDFPLTDAVIR*GKSSKVNWDFIRLL Trigger: TAAGAGTCTGATGAAATCCCAGTTCACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCACAATCAAGCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAATGCATTAGAGCAGCCTaGGAGTTTGAGAAATTGATG | + |
Preference number: 2 (lower is better) Translates to: TLPGSSFICRAIWPFQRKCIRAA*EFEKLM Trigger: CATCAATTTCTCAAACTCTCAGGCTGCTCTAATGCA...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGTACCAGGGAGCAGATTaGTTTTGCTTAATTACAGCT | + |
Preference number: 2 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVYQGAD*FCLITA Trigger: AGCTGTAATTAAGCAAAATCAATCTGCTCCCTGGTA...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGGACTGTCTATTACAATaGCCATCTAGGTATGCCATT | + |
Preference number: 2 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVDCLLQ*PSRYAI Trigger: AATGGCATACCTAGATGGGCATTGTAATAGACAGTC...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGCCTTTCAGCTGCAACTaGTGTCCCTGCCACTGGCAT | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWPFSCN*CPCHWH Trigger: ATGCCAGTGGCAGGGACAGCAGTTGCAGCTGAAAGG...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCACCCAATGAGCTCATCTaGAAGATGAAGCCACTAGAG | + |
Preference number: 2 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSPNELI*KMKPLE Trigger: CTCTAGTGGCTTCATCTTGCAGATGAGCTCATTGGG...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | ACAAGACCCTACACACACTTTCACAGCACAGGTCATGCATGGCTTGCAAGTCAAAGACGACATATGAAGTaGCATACTTGGCTCTACTTA | + |
Preference number: 2 (lower is better) Translates to: TRPYTHFHSTGHAWLASQRRHMK*HTWLYL Trigger: TAAGTAGAGCCAAGTATGGCACTTCATATGTCGTCT...TTGACTTGCAAGCCATGCATGACCTGTGCTGTGAAAGTGTGTGTAGGGTCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACATCACAGCACAGGTCATaGATGGCTTGCAAGTCAAAA | + |
Preference number: 2 (lower is better) Translates to: LAKTPSITERASRKAFKTSQHRS*MACKSK Trigger: TTTTGACTTGCAAGCCATGCATGACCTGTGCTGTGA...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | GCAGTGAACAGAGAAAAATCAAAAGACATTGGCTGGAACAAGCAAGACAAGAGACCTGGCACCCACATATaGCCACACCAAATACATGAC | + |
Preference number: 2 (lower is better) Translates to: AVNREKSKDIGWNKQDKRPGTHI*PHQIHD Trigger: GTCATGTATTTGGTGTGGGCATATGTGGGTGCCAGG...TCTCTTGTCTTGCTTGTTCCAGCCAATGTCTTTTGATTTTTCTCTGTTCACTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCTCCCTATTGAAGGGCTaGAGAATTGGAAACTCAGCC | + |
Preference number: 2 (lower is better) Translates to: FHSKERSKVHLYVLHGQLSLLKG*RIGNSA Trigger: GGCTGAGTTTCCAATTCTGCAGCCCTTCAATAGGGA...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACACAGGAGGACCCTCAGTaGTTTGTTCTAATAGCTGAT | + |
Preference number: 2 (lower is better) Translates to: LAKTPSITERASRKAFKTQEDPQ*FVLIAD Trigger: ATCAGCTATTAGAACAAAGCACTGAGGGTCCTCCTG...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTACAGCAAAGTGCAAGTaGATGTTGGAGGTGATGTGG | + |
Preference number: 2 (lower is better) Translates to: RSLNQNLSREGCQTIGYSTAKCK*MLEVMW Trigger: CCACATCACCTCCAACATCCACTTGCACTTTGCTGT...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGGAGAGAAATAGAAAGTaGGTCAGACATGCATTAGAG | + |
Preference number: 2 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVERNRK*VRHALE Trigger: CTCTAATGCATGTCTGACCCACTTTCTATTTCTCTC...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCAGAAGGGCTGCAGAATTaGAAACTCAGCCCAATTCTG | + |
Preference number: 2 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSEGLQN*KLSPIL Trigger: CAGAATTGGGCTGAGTTTCCAATTCTGCAGCCCTTC...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCGAAGGGCTGCAGAATTaGAAACTCAGCCCAATTCTG | + |
Preference number: 2 (lower is better) Translates to: FHSKERSKVHLYVLHGQLEGLQN*KLSPIL Trigger: CAGAATTGGGCTGAGTTTCCAATTCTGCAGCCCTTC...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACATGGAAGGGAACATGGTaGTGGTTACATATGTCCTCT | + |
Preference number: 2 (lower is better) Translates to: LAKTPSITERASRKAFKTWKGTW*WLHMSS Trigger: AGAGGACATATGTAACCACCACCATGTTCCCTTCCA...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACACAGAAAGCCCACACATaGGTCTTTAAGAATGGAAGG | + |
Preference number: 2 (lower is better) Translates to: LAKTPSITERASRKAFKTQKAHT*VFKNGR Trigger: CCTTCCATTCTTAAAGACCCATGTGTGGGCTTTCTG...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 90 bp | GGAATTAGACATTGCCTATATATTTCCCTGTCCATCACTTGCCTGTaGGGCTTCCAGCTTAACAAGCACAGAGCAAGCTTAAATCACAGA | + |
Preference number: 2 (lower is better) Translates to: GIRHCLYISLSITCL*GFQLNKHRASLNHR Trigger: TCTGTGATTTAAGCTTGCTCTGTGCTTGTTAAGCTGGAAGCCCAACAGGCAAGTGATGGACAGGGAAATATATAGGCAATGTCTAATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGTTCCAGGGCTGCTTCTaGCCTTGCTTAGATCCTGTG | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWFQGCF*PCLDPV Trigger: CACAGGATCTAAGCAAGGTCAGAAGCAGCCCTGGAA...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCAATGGATCCACTCTGTaGGTAATGCAGAGGGTGAAA | + |
Preference number: 2 (lower is better) Translates to: FHSKERSKVHLYVLHGQLNGSTL*VMQRVK Trigger: TTTCACCCTCTGCATTACTCACAGAGTGGATCCATT...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | TGGAAACTCAGCCCAATTCTGTTCCATCAAAGCAAGCACAGTTGGCTTCCACTAGAAAATTCCAAGAGCTaGACTAGCATACAGCTGAAA | + |
Preference number: 2 (lower is better) Translates to: WKLSPILFHQSKHSWLPLENSKS*TSIQLK Trigger: TTTCAGCTGTATGCTAGTTCAGCTCTTGGAATTTTC...TAGTGGAAGCCAACTGTGCTTGCTTTGATGGAACAGAATTGGGCTGAGTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGTCTATCAAACAGGACTaGCTTAGAAAATTCCAAGAG | + |
Preference number: 2 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVSIKQD*LRKFQE Trigger: CTCTTGGAATTTTCTAAGTCAGTCCTGTTTGATAGA...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGTCCCTGTCCATCACTTaGCTGTTGGGCTTCCAGCTT | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWSLSIT*LLGFQL Trigger: AAGCTGGAAGCCCAACAGGCAAGTGATGGACAGGGA...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | GCAGTGAACAGAGAAAAATCAAAAGACATTGGCTGGAACAAGCAAGACAAGAGACCCAATGAGCTCATCTaGAAGATGAAGCCACTAGAG | + |
Preference number: 2 (lower is better) Translates to: AVNREKSKDIGWNKQDKRPNELI*KMKPLE Trigger: CTCTAGTGGCTTCATCTTGCAGATGAGCTCATTGGG...TCTCTTGTCTTGCTTGTTCCAGCCAATGTCTTTTGATTTTTCTCTGTTCACTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAAAATTCTGAAATCAAATaGCCTGCCTGCTCAGTGTAT | + |
Preference number: 2 (lower is better) Translates to: TLPGSSFICRAIWPFQRKNSEIK*PACSVY Trigger: ATACACTGAGCAGGCAGGGCATTTGATTTCAGAATT...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGCACTACAGTGTGGGATaGACAAGTGGGGATACCCCA | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWHYSVG*TSGDTP Trigger: TGGGGTATCCCCACTTGTGCATCCCACACTGTAGTG...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | GCAGTGAACAGAGAAAAATCAAAAGACATTGGCTGGAACAAGCAAGACAAGAGACACAGGAGCCAGCTCTaGGTCTTCACTGTTTTTGTT | + |
Preference number: 2 (lower is better) Translates to: AVNREKSKDIGWNKQDKRHRSQL*VFTVFV Trigger: AACAAAAACAGTGAAGACCCAGAGCTGGCTCCTGTG...TCTCTTGTCTTGCTTGTTCCAGCCAATGTCTTTTGATTTTTCTCTGTTCACTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGTCTTATCTTGTGAGATaGCTTGAGAAAGATTGGCAT | + |
Preference number: 2 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVSYLVR*LEKDWH Trigger: ATGCCAATCTTTCTCAAGCCATCTCACAAGATAAGA...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAAAAGGGAACATGGTGGTaGTTACATATGTCCTCTATT | + |
Preference number: 2 (lower is better) Translates to: TLPGSSFICRAIWPFQRKKGTWW*LHMSSI Trigger: AATAGAGGACATATGTAACCACCACCATGTTCCCTT...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTGGTTCACTTACATGGTaGGCATTTTTGTTCACCGTA | + |
Preference number: 2 (lower is better) Translates to: RSLNQNLSREGCQTIGYSGSLTW*AFLFTV Trigger: TACGGTGAACAAAAATGCTCACCATGTAAGTGAACC...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | TGGAAACTCAGCCCAATTCTGTTCCATCAAAGCAAGCACAGTTGGCTTCCACTAATAGTTGAGCAATCATaGGAAACTGGTTCACTTACA | + |
Preference number: 2 (lower is better) Translates to: WKLSPILFHQSKHSWLPLIVEQS*ETGSLT Trigger: TGTAAGTGAACCAGTTTCTCATGATTGCTCAACTAT...TAGTGGAAGCCAACTGTGCTTGCTTTGATGGAACAGAATTGGGCTGAGTTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTTGCATTAGAGCAGCCTaGGAGTTTGAGAAATTGATG | + |
Preference number: 2 (lower is better) Translates to: RSLNQNLSREGCQTIGYSCIRAA*EFEKLM Trigger: CATCAATTTCTCAAACTCTCAGGCTGCTCTAATGCA...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTCCAAAGGGCAATGGATaGGATTTTATTACTACCCCT | + |
Preference number: 2 (lower is better) Translates to: RSLNQNLSREGCQTIGYSPKGNG*DFITTP Trigger: AGGGGTAGTAATAAAATCTCATCCATTGCCCTTTGG...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACAGGTTATTTAGAATTCTaGAATCAAATGCCCTGCCTG | + |
Preference number: 2 (lower is better) Translates to: LAKTPSITERASRKAFKTGYLEF*NQMPCL Trigger: CAGGCAGGGCATTTGATTTCAGAATTCTAAATAACC...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGTATTTAGAGAGCTATTaGACCCACATGTACATTTTC | + |
Preference number: 2 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVYLESY*THMYIF Trigger: GAAAATGTACATGTGGGTGCAATAGCTCTCTAAATA...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGAGCACACGTCTGTTGTaGAGCTTGAAGATGAAGGCC | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWSTRLL*SLKMKA Trigger: GGCCTTCATCTTCAAGCTGCACAACAGACGTGTGCT...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCAAAACACCGCAATGCATaGTTGATTGTGGATTTCCCA | + |
Preference number: 2 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSKHRNA*LIVDFP Trigger: TGGGAAATCCACAATCAAGCATGCATTGCGGTGTTT...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACAGCAAGACAAGAGAAGTaGTCAGAGAAATTGATTCAG | + |
Preference number: 2 (lower is better) Translates to: LAKTPSITERASRKAFKTARQEK*SEKLIQ Trigger: CTGAATCAATTTCTCTGAGCACTTCTCTTGTCTTGC...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | ACTGACATGGGATCACTATACACAGCAAAGTGCAAGTGGATGTTGGAGGTGATGTCTTATCTTGTGAGATaGCTTGAGAAAGATTGGCAT | + |
Preference number: 2 (lower is better) Translates to: TDMGSLYTAKCKWMLEVMSYLVR*LEKDWH Trigger: ATGCCAATCTTTCTCAAGCCATCTCACAAGATAAGA...CATCACCTCCAACATCCACTTGCACTTTGCTGTGTATAGTGATCCCATGTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTCAGCTGAAACTCCAATaGATCCACTCTGTGAGTAAT | + |
Preference number: 2 (lower is better) Translates to: RSLNQNLSREGCQTIGYSQLKLQ*IHSVSN Trigger: ATTACTCACAGAGTGGATCCATTGGAGTTTCAGCTG...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | CAGAAAAGGGGCTTAATAAAGTTCTCTTTAAGCTTCACTGCTCATTCCTTGGTTTGCTTAACAGCCATGTaGCTAGTGGCCACTCTACTA | + |
Preference number: 2 (lower is better) Translates to: QKRGLIKFSLSFTAHSLVCLTAM*LVATLL Trigger: TAGTAGAGTGGCCACTAGCCACATGGCTGTTAAGCA...AACCAAGGAATGAGCAGTGAAGCTTAAAGAGAACTTTATTAAGCCCCTTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 90 bp | AGATCATCAAGGACTGTCTATTACAATGCCCATCTAGGTATGCCATaGATTAGCAACATTTGTGACTTTGACACAAAGCCCTCCAAACTG | + |
Preference number: 2 (lower is better) Translates to: RSSRTVYYNAHLGMP*ISNICDFDTKPSKL Trigger: CAGTTTGGAGGGCTTTGTGTCAAAGTCACAAATGTTGCTAATCAATGGCATACCTAGATGGGCATTGTAATAGACAGTCCTTGATGATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR TCA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACATGTATAAAAAGTTTATaGAGACCAGGGTTCAGTCAC | + |
Preference number: 2 (lower is better) Translates to: LAKTPSITERASRKAFKTCIKSL*RPGFSH Trigger: GTGACTGAACCCTGGTCTTCATAAACTTTTTATACA...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCACAAAGCACAACACACTaGAGACATGTGTGCAAATAT | + |
Preference number: 2 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSQSTTH*RHVCKY Trigger: ATATTTGCACACATGTCTTCAGTGTGTTGTGCTTTG...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | AAGACGACATATGAAGTGCCATACTTGGCTCTACTTAACACGGTAAGCATTCTCTACCAGGGAGCAGATTaGTTTTGCTTAATTACAGCT | + |
Preference number: 2 (lower is better) Translates to: KTTYEVPYLALLNTVSILYQGAD*FCLITA Trigger: AGCTGTAATTAAGCAAAATCAATCTGCTCCCTGGTA...GAGAATGCTTACCGTGTTAAGTAGAGCCAAGTATGGCACTTCATATGTCGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | CAGAAAAGGGGCTTAATAAAGTTCTCTTTAAGCTTCACTGCTCATTCCTTGGTTAATGGATCCACTCTGTaGGTAATGCAGAGGGTGAAA | + |
Preference number: 2 (lower is better) Translates to: QKRGLIKFSLSFTAHSLVNGSTL*VMQRVK Trigger: TTTCACCCTCTGCATTACTCACAGAGTGGATCCATT...AACCAAGGAATGAGCAGTGAAGCTTAAAGAGAACTTTATTAAGCCCCTTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCGGTTATTTAGAATTCTaGAATCAAATGCCCTGCCTG | + |
Preference number: 2 (lower is better) Translates to: FHSKERSKVHLYVLHGQLGYLEF*NQMPCL Trigger: CAGGCAGGGCATTTGATTTCAGAATTCTAAATAACC...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAATTTACTATACAGCTTTaGAAGAAAAACCACAGGACA | + |
Preference number: 2 (lower is better) Translates to: TLPGSSFICRAIWPFQRKFTIQL*KKNHRT Trigger: TGTCCTGTGGTTTTTCTTGCAAAGCTGTATAGTAAA...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCAGACGACATATGAAGTaGCATACTTGGCTCTACTTA | + |
Preference number: 2 (lower is better) Translates to: FHSKERSKVHLYVLHGQLRRHMK*HTWLYL Trigger: TAAGTAGAGCCAAGTATGGCACTTCATATGTCGTCT...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR GCA 90 bp | GCAGTGAACAGAGAAAAATCAAAAGACATTGGCTGGAACAAGCAAGACAAGAGAAAACACCGCAATGCATaGTTGATTGTGGATTTCCCA | + |
Preference number: 2 (lower is better) Translates to: AVNREKSKDIGWNKQDKRKHRNA*LIVDFP Trigger: TGGGAAATCCACAATCAAGCATGCATTGCGGTGTTT...TCTCTTGTCTTGCTTGTTCCAGCCAATGTCTTTTGATTTTTCTCTGTTCACTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCATGGCTTGAGAAAGATTaGCATATAGGTTTCTTAGGG | + |
Preference number: 2 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSWLEKD*HIGFLG Trigger: CCCTAAGAAACCTATATGCCAATCTTTCTCAAGCCA...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCAGAGAGAAATAGAAAGTaGGTCAGACATGCATTAGAG | + |
Preference number: 2 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSERNRK*VRHALE Trigger: CTCTAATGCATGTCTGACCCACTTTCTATTTCTCTC...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTAGCACAGGTCATGCATaGCTTGCAAGTCAAAAATTT | + |
Preference number: 2 (lower is better) Translates to: RSLNQNLSREGCQTIGYSSTGHA*LASQKF Trigger: AAATTTTTGACTTGCAAGCCATGCATGACCTGTGCT...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCAGCACAGGTCATGCATaGCTTGCAAGTCAAAAATTT | + |
Preference number: 2 (lower is better) Translates to: FHSKERSKVHLYVLHGQLSTGHA*LASQKF Trigger: AAATTTTTGACTTGCAAGCCATGCATGACCTGTGCT...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCATTCCCCAAAGTAGTTaGTTTGACATGGCATATGGA | + |
Preference number: 2 (lower is better) Translates to: FHSKERSKVHLYVLHGQLIPQSS*FDMAYG Trigger: TCCATATGCCATGTCAAACCAACTACTTTGGGGAAT...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | GCAGTGAACAGAGAAAAATCAAAAGACATTGGCTGGAACAAGCAAGACAAGAGATGCCTGCTCAGTGTATaGGTGATCAATGGTTTTTCA | + |
Preference number: 2 (lower is better) Translates to: AVNREKSKDIGWNKQDKRCLLSV*VINGFS Trigger: TGAAAAACCATTGATCACCCATACACTGAGCAGGCA...TCTCTTGTCTTGCTTGTTCCAGCCAATGTCTTTTGATTTTTCTCTGTTCACTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAAAAAATCAAAAGACATTaGCTGGAACAAGCAAGACAA | + |
Preference number: 2 (lower is better) Translates to: TLPGSSFICRAIWPFQRKKIKRH*LEQARQ Trigger: TTGTCTTGCTTGTTCCAGCCAATGTCTTTTGATTTT...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 41% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 90 bp | GCAAGCAGGAAGGCTTTTAAGACATTCCGATTAATAAACAGCAGCTaGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGACAAGA | + |
Preference number: 2 (lower is better) Translates to: ASRKAFKTFRLINSS*ISPMKSVFGNIWTR Trigger: TCTTGTCCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAATCGGAATGTCTTAAAAGCCTTCCTGCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTTGTATAAAAAGTTTATaGAGACCAGGGTTCAGTCAC | + |
Preference number: 2 (lower is better) Translates to: RSLNQNLSREGCQTIGYSCIKSL*RPGFSH Trigger: GTGACTGAACCCTGGTCTTCATAAACTTTTTATACA...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | CAGAAAAGGGGCTTAATAAAGTTCTCTTTAAGCTTCACTGCTCATTCCTTGGTTGGTTCACTTACATGGTaGGCATTTTTGTTCACCGTA | + |
Preference number: 2 (lower is better) Translates to: QKRGLIKFSLSFTAHSLVGSLTW*AFLFTV Trigger: TACGGTGAACAAAAATGCTCACCATGTAAGTGAACC...AACCAAGGAATGAGCAGTGAAGCTTAAAGAGAACTTTATTAAGCCCCTTTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTATAGTTGAGCAATCATaGGAAACTGGTTCACTTACA | + |
Preference number: 2 (lower is better) Translates to: RSLNQNLSREGCQTIGYSIVEQS*ETGSLT Trigger: TGTAAGTGAACCAGTTTCTCATGATTGCTCAACTAT...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTTCTATCAAACAGGACTaGCTTAGAAAATTCCAAGAG | + |
Preference number: 2 (lower is better) Translates to: RSLNQNLSREGCQTIGYSSIKQD*LRKFQE Trigger: CTCTTGGAATTTTCTAAGTCAGTCCTGTTTGATAGA...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCTCAAGAGTTTCAGGTTaGAAAAGATCCAGCAACTAT | + |
Preference number: 2 (lower is better) Translates to: FHSKERSKVHLYVLHGQLSRVSG*KRSSNY Trigger: ATAGTTGCTGGATCTTTTTCAACCTGAAACTCTTGA...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACATATTTAGAGAGCTATTaGACCCACATGTACATTTTC | + |
Preference number: 2 (lower is better) Translates to: LAKTPSITERASRKAFKTYLESY*THMYIF Trigger: GAAAATGTACATGTGGGTGCAATAGCTCTCTAAATA...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCACTCTTTAAGCTTCACTaGTCATTCCTTGGTTTAAAG | + |
Preference number: 2 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSLFKLH*SFLGLK Trigger: CTTTAAACCAAGGAATGAGCAGTGAAGCTTAAAGAG...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TTGATTAGCAACATTTGTGACTTTGACACAAAGCCCTCCAAACTGAGGGAAAATGAGCCTTTACTGACATaGGATCACTATACACAGCAA | + |
Preference number: 2 (lower is better) Translates to: LISNICDFDTKPSKLRENEPLLT*DHYTQQ Trigger: TTGCTGTGTATAGTGATCCCATGTCAGTAAAGGCTC...ATTTTCCCTCAGTTTGGAGGGCTTTGTGTCAAAGTCACAAATGTTGCTAATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | CAGAAAAGGGGCTTAATAAAGTTCTCTTTAAGCTTCACTGCTCATTCCTTGGTTCAGCTGAAACTCCAATaGATCCACTCTGTGAGTAAT | + |
Preference number: 2 (lower is better) Translates to: QKRGLIKFSLSFTAHSLVQLKLQ*IHSVSN Trigger: ATTACTCACAGAGTGGATCCATTGGAGTTTCAGCTG...AACCAAGGAATGAGCAGTGAAGCTTAAAGAGAACTTTATTAAGCCCCTTTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCTGTATGGGTGATCAATaGTTTTTCAATGACATCACG | + |
Preference number: 2 (lower is better) Translates to: FHSKERSKVHLYVLHGQLCMGDQ*FFNDIT Trigger: CGTGATGTCATTGAAAAACCATTGATCACCCATACA...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGTGGAAGGGAACATGGTaGTGGTTACATATGTCCTCT | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWWKGTW*WLHMSS Trigger: AGAGGACATATGTAACCACCACCATGTTCCCTTCCA...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 90 bp | ACTGCCTTCTCTTACTGTTCAAACAGAGATAACATAGGTATCAACTaGTTCCCTGAAGGACATCTGTCACATCTGTTTCTCTTTTCTTTC | + |
Preference number: 2 (lower is better) Translates to: TAFSYCSNRDNIGIN*FPEGHLSHLFLFSF Trigger: GAAAGAAAAGAGAAACAGATGTGACAGATGTCCTTCAGGGAACAAGTTGATACCTATGTTATCTCTGTTTGAACAGTAAGAGAAGGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | TTGATTAGCAACATTTGTGACTTTGACACAAAGCCCTCCAAACTGAGGGAAAATCAAAGCACAACACACTaGAGACATGTGTGCAAATAT | + |
Preference number: 2 (lower is better) Translates to: LISNICDFDTKPSKLRENQSTTH*RHVCKY Trigger: ATATTTGCACACATGTCTTCAGTGTGTTGTGCTTTG...ATTTTCCCTCAGTTTGGAGGGCTTTGTGTCAAAGTCACAAATGTTGCTAATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGTCTTGTGAGATGGCTTaGGAAAGATTGGCATATAGG | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWSCEMA*ERLAYR Trigger: CCTATATGCCAATCTTTCTCAAGCCATCTCACAAGA...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | GCAGTGAACAGAGAAAAATCAAAAGACATTGGCTGGAACAAGCAAGACAAGAGAAGGTCATGCATGGCTTaGAAGTCAAAAATTTTACAG | + |
Preference number: 2 (lower is better) Translates to: AVNREKSKDIGWNKQDKRRSCMA*KSKILQ Trigger: CTGTAAAATTTTTGACTTGCAAGCCATGCATGACCT...TCTCTTGTCTTGCTTGTTCCAGCCAATGTCTTTTGATTTTTCTCTGTTCACTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGTTGAGATCAGTGATCTaGGAAACAGGGAAAGATCCA | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWLRSVI*ETGKDP Trigger: TGGATCTTTCCCTGTTTCCCAGATCACTGATCTCAA...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 90 bp | AAGAGTAACATCCATTGGAAACATAACATCCTTTACGCAACATTTTaGTCTATGTGTGTTTTCTCCTCCGAGAGAAATAGAAAGTGGGTC | + |
Preference number: 2 (lower is better) Translates to: KSNIHWKHNILYATF*SMCVFSSERNRKWV Trigger: GACCCACTTTCTATTTCTCTCGGAGGAGAAAACACACATAGACAAAAATGTTGCGTAAAGGATGTTATGTTTCCAATGGATGTTACTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGTGGCTTGAGAAAGATTaGCATATAGGTTTCTTAGGG | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWWLEKD*HIGFLG Trigger: CCCTAAGAAACCTATATGCCAATCTTTCTCAAGCCA...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGATTCCCCAAAGTAGTTaGTTTGACATGGCATATGGA | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWIPQSS*FDMAYG Trigger: TCCATATGCCATGTCAAACCAACTACTTTGGGGAAT...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR TCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGAAATACATGACAAACTaGCTGACTTCAAGGGCAAAT | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWKYMTN*LTSRAN Trigger: ATTTGCCCTTGAAGTCAGTCAGTTTGTCATGTATTT...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGTGTATGGGTGATCAATaGTTTTTCAATGACATCACG | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWCMGDQ*FFNDIT Trigger: CGTGATGTCATTGAAAAACCATTGATCACCCATACA...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR GCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGTTTACTATACAGCTTTaGAAGAAAAACCACAGGACA | + |
Preference number: 2 (lower is better) Translates to: LINSSLISPMKSVFGNIWFTIQL*KKNHRT Trigger: TGTCCTGTGGTTTTTCTTGCAAAGCTGTATAGTAAA...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 72 bp | GAGCCTCCTTTCAGCTGCAACTGCTGTCCCTGCCACTaGCATGTGATTCTAAGCCCTGGCTGCTTGCCCCAC | + |
Preference number: 3 (lower is better) Translates to: EPPFSCNCCPCH*HVILSPGCLPH Trigger: GTGGGGCAAGCAGCCAGGGCTTAGAATCACATGCCAGTGGCAGGGACAGCAGTTGCAGCTGAAAGGAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 72 bp | CCAGGCACCGGCCAGGAGGCTGGTGTTGTAGACACTTaGCTTATGCACGCCCACAAAGTCTTACTCCCAGGA | + |
Preference number: 3 (lower is better) Translates to: PGTGQEAGVVDT*LMHAHKVLLPG Trigger: TCCTGGGAGTAAGACTTTGTGGGCGTGCATAAGCCAAGTGTCTACAACACCAGCCTCCTGGCCGGTGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 72 bp | GATGTGGGGGAAAGATCCAGGCACCGGCCAGGAGGCTaGTGTTGTAGACACTTGGCTTATGCACGCCCACAA | + |
Preference number: 3 (lower is better) Translates to: DVGERSRHRPGG*CCRHLAYARPQ Trigger: TTGTGGGCGTGCATAAGCCAAGTGTCTACAACACCAGCCTCCTGGCCGGTGCCTGGATCTTTCCCCCACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR GCA 72 bp | CCACTAGAGCCTCCTTTCAGCTGCAACTGCTGTCCCTaGCACTGGCATGTGATTCTAAGCCCTGGCTGCTTG | + |
Preference number: 3 (lower is better) Translates to: PLEPPFSCNCCP*HWHVILSPGCL Trigger: CAAGCAGCCAGGGCTTAGAATCACATGCCAGTGGCAGGGACAGCAGTTGCAGCTGAAAGGAGGCTCTAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR CCA 72 bp | TACACAGCAAAGTGCAAGTGGATGTTGGAGGTGATGTaGGGGAAAGATCCAGGCACCGGCCAGGAGGCTGGT | + |
Preference number: 3 (lower is better) Translates to: YTAKCKWMLEVM*GKDPGTGQEAG Trigger: ACCAGCCTCCTGGCCGGTGCCTGGATCTTTCCCCCACATCACCTCCAACATCCACTTGCACTTTGCTGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | CACTATACACAGCAAAGTGCAAGTGGATGTTGGAGGTaGTGTGGGGGAAAGATCCAGGCACCGGCCAGGAGG | + |
Preference number: 3 (lower is better) Translates to: HYTQQSASGCWR*CGGKIQAPARR Trigger: CCTCCTGGCCGGTGCCTGGATCTTTCCCCCACATCACCTCCAACATCCACTTGCACTTTGCTGTGTATAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | CAGAGCCCAGGGTTTTGTCTGTACCATTCCCTCAGGTaGGGCTCCTTGGCAATGGGATGGCTAAGTCCACCT | + |
Preference number: 3 (lower is better) Translates to: QSPGFCLYHSLR*GSLAMGWLSPP Trigger: AGGTGGACTTAGCCATCCCATTGCCAAGGAGCCTCACCTGAGGGAATGGTACAGACAAAACCCTGGGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR GCA 72 bp | CAAGTGACAATTGCAGGCCAGCGCTTGCACCAAATGTaGAGTGTCACCCCCATCTCATCACAGGGATCCCAT | + |
Preference number: 3 (lower is better) Translates to: QVTIAGQRLHQM*SVTPISSQGSH Trigger: ATGGGATCCCTGTGATGAGATGGGGGTGACACTGCACATTTGGTGCAAGCGCTGGCCTGCAATTGTCACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR GCA 72 bp | CGCACGCACACACACGTGAGCATACACACACAAACATaGACACACAGGAGCCAGCTCTGGGTCTTCACTGTT | + |
Preference number: 3 (lower is better) Translates to: RTHTHVSIHTQT*THRSQLWVFTV Trigger: AACAGTGAAGACCCAGAGCTGGCTCCTGTGTGTGCATGTTTGTGTGTGTATGCTCACGTGTGTGTGCGTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGTGTTCTCCTGGGATCTaGCTGAGACCTCACCCTCTG | + |
Preference number: 3 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVCSPGI*LRPHPL Trigger: CAGAGGGTGAGGTCTCAGCAAGATCCCAGGAGAACA...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | ACAAGACCCTACACACACTTTCACAGCACAGGTCATGCATGGCTTGCAAGTCAAGGGCTGCTTCTGACCTaGCTTAGATCCTGTGCCACT | + |
Preference number: 3 (lower is better) Translates to: TRPYTHFHSTGHAWLASQGLLLT*LRSCAT Trigger: AGTGGCACAGGATCTAAGCAAGGTCAGAAGCAGCCC...TTGACTTGCAAGCCATGCATGACCTGTGCTGTGAAAGTGTGTGTAGGGTCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACAAGTTGGCAGGCCTCCTaGCCCCCTCCTCTAACACAC | + |
Preference number: 3 (lower is better) Translates to: LAKTPSITERASRKAFKTSWQAS*PPPLTH Trigger: GTGTGTTAGAGGAGGGGGCAAGGAGGCCTGCCAACT...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | CAGGCCAATCATGCTTCCATGTTCCAGGGCTGCTTCTaGCCTTGCTTAGATCCTGTGCCACTCTTTCCTTTC | + |
Preference number: 3 (lower is better) Translates to: QANHASMFQGCF*PCLDPVPLFPF Trigger: GAAAGGAAAGAGTGGCACAGGATCTAAGCAAGGTCAGAAGCAGCCCTGGAACATGGAAGCATGATTGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR GCA 72 bp | ATCTGCAAGATGAAGCCACTAGAGCCTCCTTTCAGCTaGAACTGCTGTCCCTGCCACTGGCATGTGATTCTA | + |
Preference number: 3 (lower is better) Translates to: ICKMKPLEPPFS*NCCPCHWHVIL Trigger: TAGAATCACATGCCAGTGGCAGGGACAGCAGTTGCAGCTGAAAGGAGGCTCTAGTGGCTTCATCTTGCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR GCA 72 bp | GACCAGCCCCAAAGAGAGTGCTCCCTATTGAAGGGCTaGAGAATTGGAAACTCAGCCCAATTCTGTTCCATC | + |
Preference number: 3 (lower is better) Translates to: DQPQRECSLLKG*RIGNSAQFCSI Trigger: GATGGAACAGAATTGGGCTGAGTTTCCAATTCTGCAGCCCTTCAATAGGGAGCACTCTCTTTGGGGCTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | GGGCGGGGAGCAATGAAGAGGAAGGCTAGGAAATTCTaGCATGGTACAGATTTTCAAAGGAAGGGACAGGAG | + |
Preference number: 3 (lower is better) Translates to: GRGAMKRKARKF*HGTDFQRKGQE Trigger: CTCCTGTCCCTTCCTTTGAAAATCTGTACCATGTCAGAATTTCCTAGCCTTCCTCTTCATTGCTCCCCGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR CCA 72 bp | ACTGACATGGGATCACTATACACAGCAAAGTGCAAGTaGATGTTGGAGGTGATGTGGGGGAAAGATCCAGGC | + |
Preference number: 3 (lower is better) Translates to: TDMGSLYTAKCK*MLEVMWGKDPG Trigger: GCCTGGATCTTTCCCCCACATCACCTCCAACATCCACTTGCACTTTGCTGTGTATAGTGATCCCATGTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACATGTTCTCCTGGGATCTaGCTGAGACCTCACCCTCTG | + |
Preference number: 3 (lower is better) Translates to: LAKTPSITERASRKAFKTCSPGI*LRPHPL Trigger: CAGAGGGTGAGGTCTCAGCAAGATCCCAGGAGAACA...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACACGTCTGTTGTGCAGCTaGAAGATGAAGGCCAGCAGG | + |
Preference number: 3 (lower is better) Translates to: LAKTPSITERASRKAFKTRLLCS*KMKASR Trigger: CCTGCTGGCCTTCATCTTCAAGCTGCACAACAGACG...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | GCAGTGAACAGAGAAAAATCAAAAGACATTGGCTGGAACAAGCAAGACAAGAGAAGTTGGCAGGCCTCCTaGCCCCCTCCTCTAACACAC | + |
Preference number: 3 (lower is better) Translates to: AVNREKSKDIGWNKQDKRSWQAS*PPPLTH Trigger: GTGTGTTAGAGGAGGGGGCAAGGAGGCCTGCCAACT...TCTCTTGTCTTGCTTGTTCCAGCCAATGTCTTTTGATTTTTCTCTGTTCACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | TCAGGGATTCAACAGAACAGCAGGGAGGAACACAGCTaGGTGGAGTCCTTGACAAACATCACTCATTCCACA | + |
Preference number: 3 (lower is better) Translates to: SGIQQNSREEHS*VESLTNITHST Trigger: TGTGGAATGAGTGATGTTTGTCAAGGACTCCACTCAGCTGTGTTCCTCCCTGCTGTTCTGTTGAATCCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | AAGTTGAAGACCAGCCCCAAAGAGAGTGCTCCCTATTaGAGGGCTGCAGAATTGGAAACTCAGCCCAATTCT | + |
Preference number: 3 (lower is better) Translates to: KLKTSPKESAPY*RAAELETQPNS Trigger: AGAATTGGGCTGAGTTTCCAATTCTGCAGCCCTTCAATAGGGAGCACTCTCTTTGGGGCTGGTCTTCAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR GCA 72 bp | TCACTGCAAAGTCATCACTTTAGCACACGTCTGTTGTaGAGCTTGAAGATGAAGGCCAGCAGGCCAATCATG | + |
Preference number: 3 (lower is better) Translates to: SLQSHHFSTRLL*SLKMKASRPIM Trigger: CATGATTGGCCTGCTGGCCTTCATCTTCAAGCTGCACAACAGACGTGTGCTAAAGTGATGACTTTGCAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | ACTGACATGGGATCACTATACACAGCAAAGTGCAAGTGGATGTTGGAGGTGATGTCCATCACTTGCCTGTaGGGCTTCCAGCTTAACAAG | + |
Preference number: 3 (lower is better) Translates to: TDMGSLYTAKCKWMLEVMSITCL*GFQLNK Trigger: CTTGTTAAGCTGGAAGCCCAACAGGCAAGTGATGGA...CATCACCTCCAACATCCACTTGCACTTTGCTGTGTATAGTGATCCCATGTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTTTCCCTGTCCATCACTaGCCTGTTGGGCTTCCAGCT | + |
Preference number: 3 (lower is better) Translates to: RSLNQNLSREGCQTIGYSFPVHH*PVGLPA Trigger: AGCTGGAAGCCCAACAGGCAAGTGATGGACAGGGAA...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAACCATCTAGGGAGGCATaGAGATCAGTGATCTGGGAA | + |
Preference number: 3 (lower is better) Translates to: TLPGSSFICRAIWPFQRKPSREA*RSVIWE Trigger: TTCCCAGATCACTGATCTCAATGCCTCCCTAGATGG...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR GCA 72 bp | GCCTTTACTGACATGGGATCACTATACACAGCAAAGTaGAAGTGGATGTTGGAGGTGATGTGGGGGAAAGAT | + |
Preference number: 3 (lower is better) Translates to: AFTDMGSLYTAK*KWMLEVMWGKD Trigger: ATCTTTCCCCCACATCACCTCCAACATCCACTTGCACTTTGCTGTGTATAGTGATCCCATGTCAGTAAAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR CCA 72 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTaGCCCTTTCAAAGAAAAGCTTCCCCAAAGAAACTG | + |
Preference number: 3 (lower is better) Translates to: TLPGSSFICRAI*PFQRKASPKKL Trigger: CAGTTTCTTTGGGGAAGCTTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACACCTCACCCTCTGCACTaGTCTTTAGGTGAATCAAGT | + |
Preference number: 3 (lower is better) Translates to: LAKTPSITERASRKAFKTPHPLH*SLGESS Trigger: ACTTGATTCACCTAAAGACAAGTGCAGAGGGTGAGG...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTTCCATCACTTGCCTGTaGGGCTTCCAGCTTAACAAG | + |
Preference number: 3 (lower is better) Translates to: RSLNQNLSREGCQTIGYSSITCL*GFQLNK Trigger: CTTGTTAAGCTGGAAGCCCAACAGGCAAGTGATGGA...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR GCA 72 bp | ACACGGGTCTTGTCTTCTTGCTATAGAATTACAACCTaGACACTACTGCTCTCTACATACCCCAATGAGCTC | + |
Preference number: 3 (lower is better) Translates to: TRVLSSCYRITT*TLLLSTYPNEL Trigger: GAGCTCATTGGGGTATGTAGAGAGCAGTAGTGTGCAGGTTGTAATTCTATAGCAAGAAGACAAGACCCGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CAA 90 bp | AGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTGCCAGACTATCGGCTACAGTCCTCACCCTCTGCACTaGTCTTTAGGTGAATCAAGT | + |
Preference number: 3 (lower is better) Translates to: RSLNQNLSREGCQTIGYSPHPLH*SLGESS Trigger: ACTTGATTCACCTAAAGACAAGTGCAGAGGGTGAGG...ACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CAA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGTTCCCTGTCCATCACTaGCCTGTTGGGCTTCCAGCT | + |
Preference number: 3 (lower is better) Translates to: LINSSLISPMKSVFGNIWFPVHH*PVGLPA Trigger: AGCTGGAAGCCCAACAGGCAAGTGATGGACAGGGAA...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CAA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAATTCAGAAAACACCATTaGGCCAACAAGTTGAAGACC | + |
Preference number: 3 (lower is better) Translates to: TLPGSSFICRAIWPFQRKFRKHH*ANKLKT Trigger: GGTCTTCAACTTGTTGGCCAAATGGTGTTTTCTGAA...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | GCAACATTTGTGACTTTGACACAAAGCCCTCCAAACTaGGGGAAAATGACGAGTTCTTCTGATGCTCTGTCT | + |
Preference number: 3 (lower is better) Translates to: ATFVTLTQSPPN*GKMTSSSDALS Trigger: AGACAGAGCATCAGAAGAACTCGTCATTTTCCCTCAGTTTGGAGGGCTTTGTGTCAAAGTCACAAATGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR TCA 72 bp | TGTCAAGAAGTAATTTCTCCATCTAGGTCCAGAGTATaGGTTGGCCAACTTCTGGTGTGGTTCCGGAATGTT | + |
Preference number: 3 (lower is better) Translates to: CQEVISPSRSRV*VGQLLVWFRNV Trigger: AACATTCCGGAACCACACCAGAAGTTGGCCAACTCATACTCTGGACCTAGATGGAGAAATTACTTCTTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR GCA 72 bp | ATTAGACATTGCCTATATATTTCCCTGTCCATCACTTaGCTGTTGGGCTTCCAGCTTAACAAGCACAGAGCA | + |
Preference number: 3 (lower is better) Translates to: IRHCLYISLSIT*LLGFQLNKHRA Trigger: TGCTCTGTGCTTGTTAAGCTGGAAGCCCAACAGGCAAGTGATGGACAGGGAAATATATAGGCAATGTCTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR GCA 72 bp | CAGTATTTGGCAACATTTGGACAAGAATTTCTACACTaGCCGGCAGCTCATTTATCTGTAGGGCAATTTGGC | + |
Preference number: 3 (lower is better) Translates to: QYLATFGQEFLH*PAAHLSVGQFG Trigger: GCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGTAGAAATTCTTGTCCAAATGTTGCCAAATACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 72 bp | AGTTCTTCTGATGCTCTGTCTGAGCCTTTACTGACATaGGATCACTATACACAGCAAAGTGCAAGTGGATGT | + |
Preference number: 3 (lower is better) Translates to: SSSDALSEPLLT*DHYTQQSASGC Trigger: ACATCCACTTGCACTTTGCTGTGTATAGTGATCCCATGTCAGTAAAGGCTCAGACAGAGCATCAGAAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 72 bp | TTGCAATGTGTTATACAAGACCAGAAAGCCCACACATaGGTCTTTAAGAATGGAAGGGAACATGGTGGTGGT | + |
Preference number: 3 (lower is better) Translates to: LQCVIQDQKAHT*VFKNGREHGGG Trigger: ACCACCACCATGTTCCCTTCCATTCTTAAAGACCCATGTGTGGGCTTTCTGGTCTTGTATAACACATTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CAA 90 bp | CAGAAAAGGGGCTTAATAAAGTTCTCTTTAAGCTTCACTGCTCATTCCTTGGTTAAGTGCAAGTGGATGTaGGAGGTGATGTGGGGGAAA | + |
Preference number: 3 (lower is better) Translates to: QKRGLIKFSLSFTAHSLVKCKWM*EVMWGK Trigger: TTTCCCCCACATCACCTCCAACATCCACTTGCACTT...AACCAAGGAATGAGCAGTGAAGCTTAAAGAGAACTTTATTAAGCCCCTTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCTTTAGCACACGTCTGTaGTGCAGCTTGAAGATGAAG | + |
Preference number: 3 (lower is better) Translates to: FHSKERSKVHLYVLHGQLFSTRL*CSLKMK Trigger: CTTCATCTTCAAGCTGCACAACAGACGTGTGCTAAA...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CAA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGTCAGAGCCCAGGGTTTaGTCTGTACCATTCCCTCAG | + |
Preference number: 3 (lower is better) Translates to: LINSSLISPMKSVFGNIWSEPRV*SVPFPQ Trigger: CTGAGGGAATGGTACAGACAAAACCCTGGGCTCTGA...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR TCA 72 bp | GCACCCACATATGCCCACACCAAATACATGACAAACTaGCTGACTTCAAGGGCAAATAGAAACACTGTAAAC | + |
Preference number: 3 (lower is better) Translates to: APTYAHTKYMTN*LTSRANRNTVN Trigger: GTTTACAGTGTTTCTATTTGCCCTTGAAGTCAGTCAGTTTGTCATGTATTTGGTGTGGGCATATGTGGGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR GCA 72 bp | AGGAGATCTTTAAATCAAAATCTAAGCAGGGAAGGGTaGCAGACTATCGGCTACAGTCTGAGTTTTATACGG | + |
Preference number: 3 (lower is better) Translates to: RRSLNQNLSREG*QTIGYSLSFIR Trigger: CCGTATAAAACTCAGACTGTAGCCGATAGTCTGGCACCCTTCCCTGCTTAGATTTTGATTTAAAGATCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR GCA 72 bp | AACAGCCTCAGAACAGCACTAATCTCACCATCTGATTaGAATGTGTTATACAAGACCAGAAAGCCCACACAT | + |
Preference number: 3 (lower is better) Translates to: NSLRTALISPSD*NVLYKTRKPTH Trigger: ATGTGTGGGCTTTCTGGTCTTGTATAACACATTGCAATCAGATGGTGAGATTAGTGCTGTTCTGAGGCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGAAGTGCAAGTGGATGTaGGAGGTGATGTGGGGGAAA | + |
Preference number: 3 (lower is better) Translates to: LINSSLISPMKSVFGNIWKCKWM*EVMWGK Trigger: TTTCCCCCACATCACCTCCAACATCCACTTGCACTT...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | TGGAAACTCAGCCCAATTCTGTTCCATCAAAGCAAGCACAGTTGGCTTCCACTATTCACCGTACTACTTTaGGCAGTAGAAACATTTGAA | + |
Preference number: 3 (lower is better) Translates to: WKLSPILFHQSKHSWLPLFTVLL*AVETFE Trigger: TTCAAATGTTTCTACTGCCAAAAGTAGTACGGTGAA...TAGTGGAAGCCAACTGTGCTTGCTTTGATGGAACAGAATTGGGCTGAGTTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAATTTTACTATACAGCTTaGCAAGAAAAACCACAGGAC | + |
Preference number: 3 (lower is better) Translates to: TLPGSSFICRAIWPFQRKFYYTA*QEKPQD Trigger: GTCCTGTGGTTTTTCTTGCAAAGCTGTATAGTAAAA...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCACTACCAGGGAGCAGATaGATTTTGCTTAATTACAGC | + |
Preference number: 3 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSLPGSR*ILLNYS Trigger: GCTGTAATTAAGCAAAATCAATCTGCTCCCTGGTAG...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCCTACCAGGGAGCAGATaGATTTTGCTTAATTACAGC | + |
Preference number: 3 (lower is better) Translates to: FHSKERSKVHLYVLHGQLLPGSR*ILLNYS Trigger: GCTGTAATTAAGCAAAATCAATCTGCTCCCTGGTAG...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | CAGCTTAACAAGCACAGAGCAAGCTTAAATCACAGATaGAGAGAAATGAAGGAACTTGGCAAAGCACAACAC | + |
Preference number: 3 (lower is better) Translates to: QLNKHRASLNHR*REMKELGKAQH Trigger: GTGTTGTGCTTTGCCAAGTTCCTTCATTTCTCTTCATCTGTGATTTAAGCTTGCTCTGTGCTTGTTAAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | CTATCAAACAGGACTGACTTAGAAAATTCCAAGAGCTaGACTAGCATACAGCTGAAACTCCAATGGATCCAC | + |
Preference number: 3 (lower is better) Translates to: LSNRTDLENSKS*TSIQLKLQWIH Trigger: GTGGATCCATTGGAGTTTCAGCTGTATGCTAGTTCAGCTCTTGGAATTTTCTAAGTCAGTCCTGTTTGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR GCA 72 bp | CTACACACACTTTCACAGCACAGGTCATGCATGGCTTaGAAGTCAAAAATTTTACAGCTACTGTCTAGCTAT | + |
Preference number: 3 (lower is better) Translates to: LHTLSQHRSCMA*KSKILQLLSSY Trigger: ATAGCTAGACAGTAGCTGTAAAATTTTTGACTTGCAAGCCATGCATGACCTGTGCTGTGAAAGTGTGTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR CCA 72 bp | CCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTaGAATTTCTGTCAGTATGAGAATGACTTTTCAGGT | + |
Preference number: 3 (lower is better) Translates to: PWVNSLGDLTLA*NFCQYENDFSG Trigger: ACCTGAAAAGTCATTCTCATACTGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR CCA 72 bp | CAGGCAGTGAACAGAGAAAAATCAAAAGACATTGGCTaGAACAAGCAAGACAAGAGAAGTGCTCAGAGAAAT | + |
Preference number: 3 (lower is better) Translates to: QAVNREKSKDIG*NKQDKRSAQRN Trigger: ATTTCTCTGAGCACTTCTCTTGTCTTGCTTGTTCCAGCCAATGTCTTTTGATTTTTCTCTGTTCACTGCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACATTAATAAACAGCAGCTaGATATCCCCTATGAAGTCA | + |
Preference number: 3 (lower is better) Translates to: LAKTPSITERASRKAFKTLINSS*ISPMKS Trigger: TGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCCTTTACGCAACATTTTaGTCTATGTGTGTTTTCTCC | + |
Preference number: 3 (lower is better) Translates to: FHSKERSKVHLYVLHGQLLYATF*SMCVFS Trigger: GGAGAAAACACACATAGACAAAAATGTTGCGTAAAG...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | AAGACGACATATGAAGTGCCATACTTGGCTCTACTTAACACGGTAAGCATTCTCTTTTACTATACAGCTTaGCAAGAAAAACCACAGGAC | + |
Preference number: 3 (lower is better) Translates to: KTTYEVPYLALLNTVSILFYYTA*QEKPQD Trigger: GTCCTGTGGTTTTTCTTGCAAAGCTGTATAGTAAAA...GAGAATGCTTACCGTGTTAAGTAGAGCCAAGTATGGCACTTCATATGTCGTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCAAAAATCAAAAGACATaGGCTGGAACAAGCAAGACA | + |
Preference number: 3 (lower is better) Translates to: FHSKERSKVHLYVLHGQLKNQKT*AGTSKT Trigger: TGTCTTGCTTGTTCCAGCCAATGTCTTTTGATTTTT...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | AGCCATGTGGCTAGTGGCCACTCTACTAAACAACACTaGACAAATACAGAACAATTTCCATCAATCCCAAAA | + |
Preference number: 3 (lower is better) Translates to: SHVASGHSTKQH*TNTEQFPSIPK Trigger: TTTTGGGATTGATGGAAATTGTTCTGTATTTGTTCAGTGTTGTTTAGTAGAGTGGCCACTAGCCACATGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR GCA 72 bp | AAAAGACATTGGCTGGAACAAGCAAGACAAGAGAAGTaGTCAGAGAAATTGATTCAGAATGGAGTATCTCAG | + |
Preference number: 3 (lower is better) Translates to: KRHWLEQARQEK*SEKLIQNGVSQ Trigger: CTGAGATACTCCATTCTGAATCAATTTCTCTGAGCACTTCTCTTGTCTTGCTTGTTCCAGCCAATGTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR TCA 72 bp | ACTTCACATTTCCTTGCCACCAATATATCCAACCACTaGCTACTGTGTTCTCAAAAAGCAAATGCTGAGTTA | + |
Preference number: 3 (lower is better) Translates to: TSHFLATNISNH*LLCSQKANAEL Trigger: TAACTCAGCATTTGCTTTTTGAGAACACAGTAGTCAGTGGTTGGATATATTGGTGGCAAGGAAATGTGAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR-3UTR CAA 90 bp | CAGAAAAGGGGCTTAATAAAGTTCTCTTTAAGCTTCACTGCTCATTCCTTGGTTGCCAAAAGGTCTGTTTaGATTATTTTGATTTGGGTG | + |
Preference number: 3 (lower is better) Translates to: QKRGLIKFSLSFTAHSLVAKRSV*IILIWV Trigger: CACCCAAATCAAAATAATCAAAACAGACCTTTTGGC...AACCAAGGAATGAGCAGTGAAGCTTAAAGAGAACTTTATTAAGCCCCTTTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CAA 90 bp | CAGAAAAGGGGCTTAATAAAGTTCTCTTTAAGCTTCACTGCTCATTCCTTGGTTTTCACCGTACTACTTTaGGCAGTAGAAACATTTGAA | + |
Preference number: 3 (lower is better) Translates to: QKRGLIKFSLSFTAHSLVFTVLL*AVETFE Trigger: TTCAAATGTTTCTACTGCCAAAAGTAGTACGGTGAA...AACCAAGGAATGAGCAGTGAAGCTTAAAGAGAACTTTATTAAGCCCCTTTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CAA 90 bp | CAGAAAAGGGGCTTAATAAAGTTCTCTTTAAGCTTCACTGCTCATTCCTTGGTTCTTTACGCAACATTTTaGTCTATGTGTGTTTTCTCC | + |
Preference number: 3 (lower is better) Translates to: QKRGLIKFSLSFTAHSLVLYATF*SMCVFS Trigger: GGAGAAAACACACATAGACAAAAATGTTGCGTAAAG...AACCAAGGAATGAGCAGTGAAGCTTAAAGAGAACTTTATTAAGCCCCTTTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR TCA 72 bp | TCAGCATTTTGTGATCCATGGATGAGAAAATCATGCTaGTGCTTTCTACTTTATGTTAACTCCGATTACAGG | + |
Preference number: 3 (lower is better) Translates to: SAFCDPWMRKSC*CFLLYVNSDYR Trigger: CCTGTAATCGGAGTTAACATAAAGTAGAAAGCATCAGCATGATTTTCTCATCCATGGATCACAAAATGCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | AGAATGGAGTATCTCAGAGATAGTAGTTTACAATCTTaGAACATAACAAGGACCAAAAGAGGAGAGAGAGAG | + |
Preference number: 3 (lower is better) Translates to: RMEYLRDSSLQS*NITRTKRGERE Trigger: CTCTCTCTCTCCTCTTTTGGTCCTTGTTATGTTTCAAGATTGTAAACTACTATCTCTGAGATACTCCATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR GCA 72 bp | CAACTCTTTCAGAATACACACAGCCAGACTAGGGACTaGTTCTTTTATGCTAACAGATCTTTCTTCATAAAT | + |
Preference number: 3 (lower is better) Translates to: QLFQNTHSQTRD*FFYANRSFFIN Trigger: ATTTATGAAGAAAGATCTGTTAGCATAAAAGAAGCAGTCCCTAGTCTGGCTGTGTGTATTCTGAAAGAGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR CCA 72 bp | TATCTCTTTCAAATAGATACCATGGGTAAATTCTCTTaGAGATCTCACTCTTGCCTGGAATTTCTGTCAGTA | + |
Preference number: 3 (lower is better) Translates to: YLFQIDTMGKFS*RSHSCLEFLSV Trigger: TACTGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATCTATTTGAAAGAGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR-3UTR CAA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGTTCAAGAGTTTCAGGTaGAAAAAGATCCAGCAACTA | + |
Preference number: 3 (lower is better) Translates to: LINSSLISPMKSVFGNIWFKSFR*KKIQQL Trigger: TAGTTGCTGGATCTTTTTCAACCTGAAACTCTTGAA...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR TCA 72 bp | AAGCTTCCCCAAAGAAACTGTCTCCATTATTATAAATaGAACAAGTCAGGAACTAGAATTAACAGCCTCAGA | + |
Preference number: 3 (lower is better) Translates to: KLPQRNCLHYYK*NKSGTRINSLR Trigger: TCTGAGGCTGTTAATTCTAGTTCCTGACTTGTTTCATTTATAATAATGGAGACAGTTTCTTTGGGGAAGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CCA 72 bp | AAGACAAGAGAAGTGCTCAGAGAAATTGATTCAGAATaGAGTATCTCAGAGATAGTAGTTTACAATCTTGAA | + |
Preference number: 3 (lower is better) Translates to: KTREVLREIDSE*SISEIVVYNLE Trigger: TTCAAGATTGTAAACTACTATCTCTGAGATACTCCATTCTGAATCAATTTCTCTGAGCACTTCTCTTGTCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR CAA 72 bp | TCCAGGCACCGGCCAGGAGGCTGGTGTTGTAGACACTaGGCTTATGCACGCCCACAAAGTCTTACTCCCAGG | + |
Preference number: 4 (lower is better) Translates to: SRHRPGGWCCRH*AYARPQSLTPR Trigger: CCTGGGAGTAAGACTTTGTGGGCGTGCATAAGCCAAGTGTCTACAACACCAGCCTCCTGGCCGGTGCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR TCA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGGGATGGTCACCACGGTaGGAGACTTCTGCTGGCTCC | + |
Preference number: 4 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVGWSPR*ETSAGS Trigger: GGAGCCAGCAGAAGTCTCTCACCGTGGTGACCATCC...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR CCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAAGTGAGAGACTTCTGCTaGCTCCCTGGCAGCAGGCGG | + |
Preference number: 4 (lower is better) Translates to: TLPGSSFICRAIWPFQRKVRDFC*LPGSRR Trigger: CCGCCTGCTGCCAGGGAGCCAGCAGAAGTCTCTCAC...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | ATGGGATCACTATACACAGCAAAGTGCAAGTGGATGTaGGAGGTGATGTGGGGGAAAGATCCAGGCACCGGC | + |
Preference number: 4 (lower is better) Translates to: MGSLYTAKCKWM*EVMWGKDPGTG Trigger: GCCGGTGCCTGGATCTTTCCCCCACATCACCTCCAACATCCACTTGCACTTTGCTGTGTATAGTGATCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | ACTCAGCCCAATTCTGTTCCATCAAAGCAAGCACAGTaGGCTTCCACTACACTGGGGCGGGGAGCAATGAAG | + |
Preference number: 4 (lower is better) Translates to: TQPNSVPSKQAQ*ASTTLGRGAMK Trigger: CTTCATTGCTCCCCGCCCCAGTGTAGTGGAAGCCAACTGTGCTTGCTTTGATGGAACAGAATTGGGCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | TGGGCATGTCTGTCTATCTATTCAGAGCCCAGGGTTTaGTCTGTACCATTCCCTCAGGTGAGGCTCCTTGGC | + |
Preference number: 4 (lower is better) Translates to: WACLSIYSEPRV*SVPFPQVRLLG Trigger: GCCAAGGAGCCTCACCTGAGGGAATGGTACAGACAAAACCCTGGGCTCTGAATAGATAGACAGACATGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR TCA 90 bp | CTGGCTAAGACACCATCTATAACAGAGAGAGCAAGCAGGAAGGCTTTTAAGACACACAGGCCACCAGGATaGCAGTGCACACGCCAGACC | + |
Preference number: 4 (lower is better) Translates to: LAKTPSITERASRKAFKTHRPPG*QCTRQT Trigger: GGTCTGGCGTGTGCACTGTCATCCTGGTGGCCTGTG...TGTCTTAAAAGCCTTCCTGCTTGCTCTCTCTGTTATAGATGGTGTCTTAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR GCA 90 bp | ACACTGCCCGGCAGCTCATTTATCTGTAGGGCAATTTGGCCCTTTCAAAGAAAAACGGTGAGAGACTTCTaGTGGCTCCCTGGCAGCAGG | + |
Preference number: 4 (lower is better) Translates to: TLPGSSFICRAIWPFQRKTVRDF*WLPGSR Trigger: CCTGCTGCCAGGGAGCCAGCAGAAGTCTCTCACCGT...TTTTCTTTGAAAGGGCCAAATTGCCCTACAGATAAATGAGCTGCCGGGCAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR CCA 90 bp | ACTGACATGGGATCACTATACACAGCAAAGTGCAAGTGGATGTTGGAGGTGATGCTGGTCCTCATCTGCTaGAGGCACACCGAGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: TDMGSLYTAKCKWMLEVMLVLIC*RHTEQQ Trigger: CTGCTGCTCGGTGTGCCTCCAGCAGATGAGGACCAG...CATCACCTCCAACATCCACTTGCACTTTGCTGTGTATAGTGATCCCATGTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR CCA 90 bp | TGGAAACTCAGCCCAATTCTGTTCCATCAAAGCAAGCACAGTTGGCTTCCACTACTGGTCCTCATCTGCTaGAGGCACACCGAGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: WKLSPILFHQSKHSWLPLLVLIC*RHTEQQ Trigger: CTGCTGCTCGGTGTGCCTCCAGCAGATGAGGACCAG...TAGTGGAAGCCAACTGTGCTTGCTTTGATGGAACAGAATTGGGCTGAGTTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR CCA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGCACCTTACGTCCTTCTaGCTGGTCCTCATCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVHLTSF*LVLICW Trigger: CCAGCAGATGAGGACCAGCCAGAAGGACGTAAGGTG...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR CCA 90 bp | ACAAGACCCTACACACACTTTCACAGCACAGGTCATGCATGGCTTGCAAGTCAACACCTTACGTCCTTCTaGCTGGTCCTCATCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: TRPYTHFHSTGHAWLASQHLTSF*LVLICW Trigger: CCAGCAGATGAGGACCAGCCAGAAGGACGTAAGGTG...TTGACTTGCAAGCCATGCATGACCTGTGCTGTGAAAGTGTGTGTAGGGTCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR GCA 90 bp | AAGACGACATATGAAGTGCCATACTTGGCTCTACTTAACACGGTAAGCATTCTCACGGTGAGAGACTTCTaGTGGCTCCCTGGCAGCAGG | + |
Preference number: 4 (lower is better) Translates to: KTTYEVPYLALLNTVSILTVRDF*WLPGSR Trigger: CCTGCTGCCAGGGAGCCAGCAGAAGTCTCTCACCGT...GAGAATGCTTACCGTGTTAAGTAGAGCCAAGTATGGCACTTCATATGTCGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR CCA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCAACACGCCAGACCATGTaGAGCTCTTCACCACGCCCC | + |
Preference number: 4 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSTRQTM*SSSPRP Trigger: GGGGCGTGGTGAAGAGCTCCACATGGTCTGGCGTGT...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | TCTCCTGGGATCTTGCTGAGACCTCACCCTCTGCACTaGTCTTTAGGTGAATCAAGTGACAATTGCAGGCCA | + |
Preference number: 4 (lower is better) Translates to: SPGILLRPHPLH*SLGESSDNCRP Trigger: TGGCCTGCAATTGTCACTTGATTCACCTAAAGACAAGTGCAGAGGGTGAGGTCTCAGCAAGATCCCAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | AAACATCCTGTAAGGAACGAAGAGAAAGGCCCACTGTaGGAGCTCTCAGGAGGACCCTCAGTGCTTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: KHPVRNEEKGPL*ELSGGPSVLCS Trigger: AGAACAAAGCACTGAGGGTCCTCCTGAGAGCTCCAACAGTGGGCCTTTCTCTTCGTTCCTTACAGGATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR TCA 90 bp | TTGATTAGCAACATTTGTGACTTTGACACAAAGCCCTCCAAACTGAGGGAAAATCACAGGCCACCAGGATaGCAGTGCACACGCCAGACC | + |
Preference number: 4 (lower is better) Translates to: LISNICDFDTKPSKLRENHRPPG*QCTRQT Trigger: GGTCTGGCGTGTGCACTGTCATCCTGGTGGCCTGTG...ATTTTCCCTCAGTTTGGAGGGCTTTGTGTCAAAGTCACAAATGTTGCTAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR CCA 90 bp | TTGATTAGCAACATTTGTGACTTTGACACAAAGCCCTCCAAACTGAGGGAAAATGTGAGAGACTTCTGCTaGCTCCCTGGCAGCAGGCGG | + |
Preference number: 4 (lower is better) Translates to: LISNICDFDTKPSKLRENVRDFC*LPGSRR Trigger: CCGCCTGCTGCCAGGGAGCCAGCAGAAGTCTCTCAC...ATTTTCCCTCAGTTTGGAGGGCTTTGTGTCAAAGTCACAAATGTTGCTAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | CAAAGTCATCACTTTAGCACACGTCTGTTGTGCAGCTaGAAGATGAAGGCCAGCAGGCCAATCATGCTTCCA | + |
Preference number: 4 (lower is better) Translates to: QSHHFSTRLLCS*KMKASRPIMLP Trigger: TGGAAGCATGATTGGCCTGCTGGCCTTCATCTTCAAGCTGCACAACAGACGTGTGCTAAAGTGATGACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR CAA 72 bp | CTGAAACATCAAGTATATAGAAGTTGGCAGGCCTCCTaGCCCCCTCCTCTAACACACAACCACACACACACA | + |
Preference number: 4 (lower is better) Translates to: LKHQVYRSWQAS*PPPLTHNHTHT Trigger: TGTGTGTGTGTGGTTGTGTGTTAGAGGAGGGGGCAAGGAGGCCTGCCAACTTCTATATACTTGATGTTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR CAA 72 bp | CCTTGGGAATCTCCTCATGAGCCAAGCACCTTCCATTaGTGTCTTCAACTTAAGCAGGTGATCCCTGGTAGA | + |
Preference number: 4 (lower is better) Translates to: PWESPHEPSTFH*CLQLKQVIPGR Trigger: TCTACCAGGGATCACCTGCTTAAGTTGAAGACACAAATGGAAGGTGCTTGGCTCATGAGGAGATTCCCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
3UTR CAA 72 bp | ACATGGTGGTGGTTACATATGTCCTCTATTGGGAGTTaGTGGCCAACTTCCCCAGACTGCTGGCAATTTCCA | + |
Preference number: 4 (lower is better) Translates to: TWWWLHMSSIGS*WPTSPDCWQFP Trigger: TGGAAATTGCCAGCAGTCTGGGGAAGTTGGCCACAAACTCCCAATAGAGGACATATGTAACCACCACCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR TCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGGGATGGTCACCACGGTaGGAGACTTCTGCTGGCTCC | + |
Preference number: 4 (lower is better) Translates to: LINSSLISPMKSVFGNIWGWSPR*ETSAGS Trigger: GGAGCCAGCAGAAGTCTCTCACCGTGGTGACCATCC...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
||
CDS-3UTR CCA 90 bp | TTAATAAACAGCAGCTTGATATCCCCTATGAAGTCAGTATTTGGCAACATTTGGACACGCCAGACCATGTaGAGCTCTTCACCACGCCCC | + |
Preference number: 4 (lower is better) Translates to: LINSSLISPMKSVFGNIWTRQTM*SSSPRP Trigger: GGGGCGTGGTGAAGAGCTCCACATGGTCTGGCGTGT...CCAAATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | ATTTCACTGCAAAGTCATCACTTTAGCACACGTCTGTaGTGCAGCTTGAAGATGAAGGCCAGCAGGCCAATC | + |
Preference number: 4 (lower is better) Translates to: ISLQSHHFSTRL*CSLKMKASRPI Trigger: GATTGGCCTGCTGGCCTTCATCTTCAAGCTGCACAACAGACGTGTGCTAAAGTGATGACTTTGCAGTGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | CATTGCCTATATATTTCCCTGTCCATCACTTGCCTGTaGGGCTTCCAGCTTAACAAGCACAGAGCAAGCTTA | + |
Preference number: 4 (lower is better) Translates to: HCLYISLSITCL*GFQLNKHRASL Trigger: TAAGCTTGCTCTGTGCTTGTTAAGCTGGAAGCCCAACAGGCAAGTGATGGACAGGGAAATATATAGGCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR GCA 90 bp | GATACCATGGGTAAATTCTCTTGGAGATCTCACTCTTGCCTGGAATTTCTGTCAATGAAGACTGGGGTATaGTCGGAAGTGTGTGGTATG | + |
Preference number: 4 (lower is better) Translates to: DTMGKFSWRSHSCLEFLSMKTGV*SEVCGM Trigger: CATACCACACACTTCCGAGCATACCCCAGTCTTCAT...TGACAGAAATTCCAGGCAAGAGTGAGATCTCCAAGAGAATTTACCCATGGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | AGGAAGCATGCAAACATCTTCATAGTTGTCACCATCTaGAAACTGTTCTCCTGGGATCTTGCTGAGACCTCA | + |
Preference number: 4 (lower is better) Translates to: RKHANIFIVVTI*KLFSWDLAETS Trigger: TGAGGTCTCAGCAAGATCCCAGGAGAACAGTTTCAAGATGGTGACAACTATGAAGATGTTTGCATGCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | ATTGTGGATTTCCCACTCACTGATGCAGTGATTCGGTaGGGAAAGAGCTCAAAAGTGAACTGGGATTTCATC | + |
Preference number: 4 (lower is better) Translates to: IVDFPLTDAVIR*GKSSKVNWDFI Trigger: GATGAAATCCCAGTTCACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR CCA 90 bp | TTTCATAGCAAAGAGAGGAGCAAGGTACACTTATATGTACTCCATGGCCAACTCAAGTTTGATGAAGACTaGGGTATGCTCGGAAGTGTG | + |
Preference number: 4 (lower is better) Translates to: FHSKERSKVHLYVLHGQLKFDED*GMLGSV Trigger: CACACTTCCGAGCATACCCCAGTCTTCATCAAACTT...GAGTTGGCCATGGAGTACATATAAGTGTACCTTGCTCCTCTCTTTGCTATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | TATCGGCTACAGTCTGAGTTTTATACGGAATGTATCTaGAGCTGGACTCTCCACTCCCCTTTACTAACAGAA | + |
Preference number: 4 (lower is better) Translates to: YRLQSEFYTECI*SWTLHSPLLTE Trigger: TTCTGTTAGTAAAGGGGAGTGGAGAGTCCAGCTCAAGATACATTCCGTATAAAACTCAGACTGTAGCCGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR GCA 90 bp | TTGATTAGCAACATTTGTGACTTTGACACAAAGCCCTCCAAACTGAGGGAAAATATGAAGACTGGGGTATaGTCGGAAGTGTGTGGTATG | + |
Preference number: 4 (lower is better) Translates to: LISNICDFDTKPSKLRENMKTGV*SEVCGM Trigger: CATACCACACACTTCCGAGCATACCCCAGTCTTCAT...ATTTTCCCTCAGTTTGGAGGGCTTTGTGTCAAAGTCACAAATGTTGCTAATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR CCA 90 bp | CAGAAAAGGGGCTTAATAAAGTTCTCTTTAAGCTTCACTGCTCATTCCTTGGTTATGCTCGGAAGTGTGTaGTATGGCAATGACTGCCAA | + |
Preference number: 4 (lower is better) Translates to: QKRGLIKFSLSFTAHSLVMLGSV*YGNDCQ Trigger: TTGGCAGTCATTGCCATACCACACACTTCCGAGCAT...AACCAAGGAATGAGCAGTGAAGCTTAAAGAGAACTTTATTAAGCCCCTTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | AGGACTGTCTATTACAATGCCCATCTAGGTATGCCATaGATTAGCAACATTTGTGACTTTGACACAAAGCCC | + |
Preference number: 4 (lower is better) Translates to: RTVYYNAHLGMP*ISNICDFDTKP Trigger: GGGCTTTGTGTCAAAGTCACAAATGTTGCTAATCAATGGCATACCTAGATGGGCATTGTAATAGACAGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR CCA 90 bp | TTGATTAGCAACATTTGTGACTTTGACACAAAGCCCTCCAAACTGAGGGAAAATAAGTTTGATGAAGACTaGGGTATGCTCGGAAGTGTG | + |
Preference number: 4 (lower is better) Translates to: LISNICDFDTKPSKLRENKFDED*GMLGSV Trigger: CACACTTCCGAGCATACCCCAGTCTTCATCAAACTT...ATTTTCCCTCAGTTTGGAGGGCTTTGTGTCAAAGTCACAAATGTTGCTAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | TCTTACTGTTCAAACAGAGATAACATAGGTATCAACTaGTTCCCTGAAGGACATCTGTCACATCTGTTTCTC | + |
Preference number: 4 (lower is better) Translates to: SYCSNRDNIGIN*FPEGHLSHLFL Trigger: GAGAAACAGATGTGACAGATGTCCTTCAGGGAACAAGTTGATACCTATGTTATCTCTGTTTGAACAGTAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | ATCCATTGGAAACATAACATCCTTTACGCAACATTTTaGTCTATGTGTGTTTTCTCCTCCGAGAGAAATAGA | + |
Preference number: 4 (lower is better) Translates to: IHWKHNILYATF*SMCVFSSERNR Trigger: TCTATTTCTCTCGGAGGAGAAAACACACATAGACAAAAATGTTGCGTAAAGGATGTTATGTTTCCAATGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | AAAATTTTTCTAAAGACGACATATGAAGTGCCATACTaGGCTCTACTTAACACGGTAAGCATTCTCTTGCTT | + |
Preference number: 4 (lower is better) Translates to: KIFLKTTYEVPY*ALLNTVSILLL Trigger: AAGCAAGAGAATGCTTACCGTGTTAAGTAGAGCCAAGTATGGCACTTCATATGTCGTCTTTAGAAAAATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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3UTR CAA 72 bp | AAGGCTTTTAAGACATTCCGATTAATAAACAGCAGCTaGATATCCCCTATGAAGTCAGTATTTGGCAACATT | + |
Preference number: 4 (lower is better) Translates to: KAFKTFRLINSS*ISPMKSVFGNI Trigger: AATGTTGCCAAATACTGACTTCATAGGGGATATCAAGCTGCTGTTTATTAATCGGAATGTCTTAAAAGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS CCA 90 bp | ATTGCTTGGAAGTTTGATGAAGACTGGGGTATGCTCGGAAGTGTGTaGTATGGCAATGACTGCCAAGACCTCTGGGTCATCGGGCAGTTG | + |
Preference number: 5 (lower is better) Translates to: IAWKFDEDWGMLGSV*YGNDCQDLWVIGQL Trigger: CAACTGCCCGATGACCCAGAGGTCTTGGCAGTCATTGCCATACCACACACTTCCGAGCATACCCCAGTCTTCATCAAACTTCCAAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS-3UTR CAA 90 bp | GTGGATTTCCCACTCACTGATGCAGTGATTCGGTTGGGAAAGAGCTCAAAAGTGGAGATGCAGGACATGTaGTGTAGCACAATGCCCAGG | + |
Preference number: 5 (lower is better) Translates to: VDFPLTDAVIRLGKSSKVEMQDM*CSTMPR Trigger: CCTGGGCATTGTGCTACACAACATGTCCTGCATCTC...CACTTTTGAGCTCTTTCCCAACCGAATCACTGCATCAGTGAGTGGGAAATCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS GCA 72 bp | CACCCATTGCTTGGAAGTTTGATGAAGACTGGGGTATaGTCGGAAGTGTGTGGTATGGCAATGACTGCCAAG | + |
Preference number: 6 (lower is better) Translates to: HPLLGSLMKTGV*SEVCGMAMTAK Trigger: CTTGGCAGTCATTGCCATACCACACACTTCCGAGCATACCCCAGTCTTCATCAAACTTCCAAGCAATGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |
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CDS CCA 72 bp | AAGTTTGATGAAGACTGGGGTATGCTCGGAAGTGTGTaGTATGGCAATGACTGCCAAGACCTCTGGGTCATC | + |
Preference number: 6 (lower is better) Translates to: KFDEDWGMLGSV*YGNDCQDLWVI Trigger: GATGACCCAGAGGTCTTGGCAGTCATTGCCATACCACACACTTCCGAGCATACCCCAGTCTTCATCAAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058688.7 ENSMUST00000172299.2 |