Pregenerated sensors for RNF151 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008482Ensembl transcript IDs: ENSMUST00000008626.10, ENSMUST00000234399.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCAGGGATGACAAGGACAACGGAACAGAGAAGGCAAGGAGGACTTaGGGTGTGAGGTGGGCCAGGCCTGGGTTCAGTGTTTATTTAACT | + |
|
Preference number: 1 (lower is better) Translates to: CRDDKDNGTEKARRT*GVRWARPGFSVYLT Trigger: AGTTAAATAAACACTGAACCCAGGCCTGGCCCACCTCACACCTCAAGTCCTCCTTGCCTTCTCTGTTCCGTTGTCCTTGTCATCCCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR TCA 90 bp | TCCAGGGAAGAAAGGGCAGTGTCTAATATGGAAGATTTGCAGGGATaGCAAGGACAACGGAACAGAGAAGGCAAGGAGGACTTGAGGTGT | + |
|
Preference number: 1 (lower is better) Translates to: SREERAVSNMEDLQG*QGQRNREGKEDLRC Trigger: ACACCTCAAGTCCTCCTTGCCTTCTCTGTTCCGTTGTCCTTGTCATCCCTGCAAATCTTCCATATTAGACACTGCCCTTTCTTCCCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR GCA 90 bp | GAGAACAGTCCAGGGAAGAAAGGGCAGTGTCTAATATGGAAGATTTaGAGGGATGACAAGGACAACGGAACAGAGAAGGCAAGGAGGACT | + |
|
Preference number: 1 (lower is better) Translates to: ENSPGKKGQCLIWKI*RDDKDNGTEKARRT Trigger: AGTCCTCCTTGCCTTCTCTGTTCCGTTGTCCTTGTCATCCCTGCAAATCTTCCATATTAGACACTGCCCTTTCTTCCCTGGACTGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR CCA 90 bp | ATTAAGTCTGGTAGGAAAGTGCAGGAGACCCATGGAGAGACAAGGTaGGTTAACGAAGAAGGGAAGAGCTTTGCAGGATGGGGACTATTC | + |
|
Preference number: 1 (lower is better) Translates to: IKSGRKVQETHGETR*VNEEGKSFAGWGLF Trigger: GAATAGTCCCCATCCTGCAAAGCTCTTCCCTTCTTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCACTTTCCTACCAGACTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR CCA 90 bp | AAAGTCTGGGAGAACAGTCCAGGGAAGAAAGGGCAGTGTCTAATATaGAAGATTTGCAGGGATGACAAGGACAACGGAACAGAGAAGGCA | + |
|
Preference number: 1 (lower is better) Translates to: KVWENSPGKKGQCLI*KICRDDKDNGTEKA Trigger: TGCCTTCTCTGTTCCGTTGTCCTTGTCATCCCTGCAAATCTTCCATATTAGACACTGCCCTTTCTTCCCTGGACTGTTCTCCCAGACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGGTGGTGGGGTGGTGGTGACACAGCCAGAGCTACCGAGAAATCCTGTCTCAAGGCAAGGAGGACTTaGGGTGTGAGGTGGGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GRWWGGGDTARATEKSCLKARRT*GVRWAR Trigger: CCTGGCCCACCTCACACCTCAAGTCCTCCTTGCCTT...GAGACAGGATTTCTCGGTAGCTCTGGCTGTGTCACCACCACCCCACCACCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR-3UTR CCA 90 bp | GGTAGGAAAGTGCAGGAGACCCATGGAGAGACAAGGTGGGTTAACGAAGAAGGGGTGTCTGGGAGGTGGTaGGGTGGTGGTGACACAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GRKVQETHGETRWVNEEGVSGRW*GGGDTA Trigger: GGCTGTGTCACCACCACCCCACCACCTCCCAGACAC...CCCTTCTTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCACTTTCCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTGGGAGAACAGTCCAGGGAAGAAAGGGCAGTGTCTAATATGGAAGATTTGGGAGGACTTGAGGTGTaGGGTGGGCCAGGCCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SLGEQSREERAVSNMEDLGGLEV*GGPGLG Trigger: ACCCAGGCCTGGCCCACCTCACACCTCAAGTCCTCC...CAAATCTTCCATATTAGACACTGCCCTTTCTTCCCTGGACTGTTCTCCCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGGTGGTGGGGTGGTGGTGACACAGCCAGAGCTACCGAGAAATCCTGTCTCGGGCAGTGTCTAATATaGAAGATTTGCAGGGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: GRWWGGGDTARATEKSCLGQCLI*KICRDD Trigger: GTCATCCCTGCAAATCTTCCATATTAGACACTGCCC...GAGACAGGATTTCTCGGTAGCTCTGGCTGTGTCACCACCACCCCACCACCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAGTGCAGGAGACCCATGGAGAGACAAGGTGGGTTAACGAAGAAGGGAAGAGGAGAAAGAAGTGTCTaGGAGGTGGTGGGGTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GKCRRPMERQGGLTKKGRGERSV*EVVGWW Trigger: CCACCACCCCACCACCTCCCAGACACTTCTTTCTCC...TCTTCCCTTCTTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCACTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR CCA 72 bp | GGTAGGAAAGTGCAGGAGACCCATGGAGAGACAAGGTaGGTTAACGAAGAAGGGAAGAGCTTTGCAGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: GRKVQETHGETR*VNEEGKSFAGW Trigger: CCATCCTGCAAAGCTCTTCCCTTCTTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCACTTTCCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTGGGAGAACAGTCCAGGGAAGAAAGGGCAGTGTCTAATATGGAAGATTTGGAAGGCAAGGAGGACTaGAGGTGTGAGGTGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLGEQSREERAVSNMEDLEGKED*RCEVGQ Trigger: CTGGCCCACCTCACACCTCAAGTCCTCCTTGCCTTC...CAAATCTTCCATATTAGACACTGCCCTTTCTTCCCTGGACTGTTCTCCCAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR GCA 72 bp | GTACCAGCTAGGAAGCTATTAAGTCTGGTAGGAAAGTaGAGGAGACCCATGGAGAGACAAGGTGGGTTAACG | + |
|
Preference number: 3 (lower is better) Translates to: VPARKLLSLVGK*RRPMERQGGLT Trigger: CGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCACTTTCCTACCAGACTTAATAGCTTCCTAGCTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| 3UTR GCA 72 bp | CCAGGGAAGAAAGGGCAGTGTCTAATATGGAAGATTTaGAGGGATGACAAGGACAACGGAACAGAGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PGKKGQCLIWKI*RDDKDNGTEKA Trigger: TGCCTTCTCTGTTCCGTTGTCCTTGTCATCCCTGCAAATCTTCCATATTAGACACTGCCCTTTCTTCCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR CCA 90 bp | GGGAGGTGGTGGGGTGGTGGTGACACAGCCAGAGCTACCGAGAAATCCTGTCTCCAGTGCAACCCTCATTaGGGCAGGCCATCAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRWWGGGDTARATEKSCLQCNPH*GRPSAQ Trigger: TTGAGCTGATGGCCTGCCCCAATGAGGGTTGCACTG...GAGACAGGATTTCTCGGTAGCTCTGGCTGTGTCACCACCACCCCACCACCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR CCA 90 bp | TATGGAAGATTTGCAGGGATGACAAGGACAACGGAACAGAGAAGGCAAGGAGGACCAAGGCAGCCAGGGTaGACCCACAGCCTAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YGRFAGMTRTTEQRRQGGPRQPG*THSLRG Trigger: GCCCCTTAGGCTGTGGGTCCACCCTGGCTGCCTTGG...TCCTCCTTGCCTTCTCTGTTCCGTTGTCCTTGTCATCCCTGCAAATCTTCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR TCA 90 bp | TGCAGGAGACCCATGGAGAGACAAGGTGGGTTAACGAAGAAGGGAAGAGCTTTGCAGCTCAAAGGGGCATaGGTCCTGATGCTCCTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CRRPMERQGGLTKKGRALQLKGA*VLMLLA Trigger: CGCAAGGAGCATCAGGACTCATGCCCCTTTGAGCTG...CAAAGCTCTTCCCTTCTTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR GCA 90 bp | ATGGAGAGACAAGGTGGGTTAACGAAGAAGGGAAGAGCTTTGCAGGATGGGGACCTCAGCTGTGCCAGCTaGTGGTGGATGATGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MERQGGLTKKGRALQDGDLSCAS*WWMMLV Trigger: CACCAGCATCATCCACCAGCAGCTGGCACAGCTGAG...GTCCCCATCCTGCAAAGCTCTTCCCTTCTTCGTTAACCCACCTTGTCTCTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR CCA 90 bp | CATGGAGAGACAAGGTGGGTTAACGAAGAAGGGAAGAGCTTTGCAGGATGGGGAGCACGGCAACCTCGTTaGCCTCTTGAGAACCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HGETRWVNEEGKSFAGWGARQPR*PLENPM Trigger: CATGGGGTTCTCAAGAGGCCAACGAGGTTGCCGTGC...TCCCCATCCTGCAAAGCTCTTCCCTTCTTCGTTAACCCACCTTGTCTCTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR CCA 90 bp | ATGGAGAGACAAGGTGGGTTAACGAAGAAGGGAAGAGCTTTGCAGGATGGGGACTGTGCCAGCTGCTGGTaGATGATGCTGGTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MERQGGLTKKGRALQDGDCASCW*MMLVVR Trigger: CCTCACCACCAGCATCATCCACCAGCAGCTGGCACA...GTCCCCATCCTGCAAAGCTCTTCCCTTCTTCGTTAACCCACCTTGTCTCTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR CCA 90 bp | ATGGAGAGACAAGGTGGGTTAACGAAGAAGGGAAGAGCTTTGCAGGATGGGGACAGCTGTGCCAGCTGCTaGTGGATGATGCTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MERQGGLTKKGRALQDGDSCASC*WMMLVV Trigger: CACCACCAGCATCATCCACCAGCAGCTGGCACAGCT...GTCCCCATCCTGCAAAGCTCTTCCCTTCTTCGTTAACCCACCTTGTCTCTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGGTAGGAAAGTGCAGGAGACCCATGGAGAGACAAGGTGGGTTAACGAAACCTCGTTGGCCTCTTaGGAACCCCATGGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: KSGRKVQETHGETRWVNETSLAS*EPHGRQ Trigger: CTGTCTGCCATGGGGTTCTCAAGAGGCCAACGAGGT...TTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCACTTTCCTACCAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGGAAAGTGCAGGAGACCCATGGAGAGACAAGGTGGGTTAACGAAGAAGGGTACAGAAGATGTGACTaGACGGCAACCTCGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRKVQETHGETRWVNEEGYRRCD*TATSLA Trigger: GGCCAACGAGGTTGCCGTGCAGTCACATCTTCTGTA...CCCTTCTTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCACTTTCCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGGTAGGAAAGTGCAGGAGACCCATGGAGAGACAAGGTGGGTTAACGAACAGCGTTCTTGCACTTaGCTTGTAGGCGGCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KSGRKVQETHGETRWVNEQRSCT*LVGGQW Trigger: CCATTGGCCGCCTACAAGTCAAGTGCAAGAACGCTG...TTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCACTTTCCTACCAGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGGTAGGAAAGTGCAGGAGACCCATGGAGAGACAAGGTGGGTTAACGAACCATTCTGCTGGCAATaGTGGCGGTGTTCATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSGRKVQETHGETRWVNEPFCWQ*WRCSSR Trigger: CCTGGATGAACACCGCCAGCATTGCCAGCAGAATGG...TTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCACTTTCCTACCAGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGGAAAGTGCAGGAGACCCATGGAGAGACAAGGTGGGTTAACGAAGAAGGGCTCTTGAGAACCCCATaGCAGACAGAACACAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRKVQETHGETRWVNEEGLLRTP*QTEHRN Trigger: GTTCCTGTGTTCTGTCTGCCATGGGGTTCTCAAGAG...CCCTTCTTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCACTTTCCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGAACAGTCCAGGGAAGAAAGGGCAGTGTCTAATATGGAAGATTTGCAGCATCCTCCAGGAAGTTaGTCAGCTGTGCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGEQSREERAVSNMEDLQHPPGS*SAVPAA Trigger: AGCAGCTGGCACAGCTGAGCAACTTCCTGGAGGATG...CTGCAAATCTTCCATATTAGACACTGCCCTTTCTTCCCTGGACTGTTCTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR GCA 90 bp | TGGGAGAACAGTCCAGGGAAGAAAGGGCAGTGTCTAATATGGAAGATTTGCAGGCAGAACACAGGAACTTaGAGTCAGGAGGGCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WENSPGKKGQCLIWKICRQNTGT*SQEGWQ Trigger: TTGCCAGCCCTCCTGACTGCAAGTTCCTGTGTTCTG...CCTGCAAATCTTCCATATTAGACACTGCCCTTTCTTCCCTGGACTGTTCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR GCA 90 bp | TGGGAGAACAGTCCAGGGAAGAAAGGGCAGTGTCTAATATGGAAGATTTGCAGGGAAGTTGCTCAGCTGTaGCAGCTGCTGGTGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: WENSPGKKGQCLIWKICREVAQL*QLLVDD Trigger: ATCATCCACCAGCAGCTGGCACAGCTGAGCAACTTC...CCTGCAAATCTTCCATATTAGACACTGCCCTTTCTTCCCTGGACTGTTCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR CCA 90 bp | TGGGAGAACAGTCCAGGGAAGAAAGGGCAGTGTCTAATATGGAAGATTTGCAGGTGCTGTCCATTCTGCTaGCAATGCTGGCGGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WENSPGKKGQCLIWKICRCCPFC*QCWRCS Trigger: TGAACACCGCCAGCATTGCCAGCAGAATGGACAGCA...CCTGCAAATCTTCCATATTAGACACTGCCCTTTCTTCCCTGGACTGTTCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR TCA 90 bp | GGACTATTCAGTGATAGATCTAACCGGAGAAAGAAGTGTCTGGGAGGTGGTGGGGTCTGGCTAGCCACCTaGAGATGCACTTTTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLFSDRSNRRKKCLGGGGVWLAT*RCTFYR Trigger: TCTGTAAAAAGTGCATCTTCAGGTGGCTAGCCAGAC...CCCACCACCTCCCAGACACTTCTTTCTCCGGTTAGATCTATCACTGAATAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR TCA 90 bp | TATGGAAGATTTGCAGGGATGACAAGGACAACGGAACAGAGAAGGCAAGGAGGATTTTTACAGAAGATGTaGCTGCACGGCAACCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YGRFAGMTRTTEQRRQGGFLQKM*LHGNLV Trigger: AACGAGGTTGCCGTGCAGTCACATCTTCTGTAAAAA...TCCTCCTTGCCTTCTCTGTTCCGTTGTCCTTGTCATCCCTGCAAATCTTCCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS CCA 90 bp | GCTCGCGGTAGCAGTTGTGGTGCTCACCTTCCAAGGCAGCCAGGGTaGACCCACAGCCTAAGGGGCAGCGCTGCTGTCCATTCTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARGSSCGAHLPRQPG*THSLRGSAAVHSAG Trigger: GCCAGCAGAATGGACAGCAGCGCTGCCCCTTAGGCTGTGGGTCCACCCTGGCTGCCTTGGAAGGTGAGCACCACAACTGCTACCGCGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS GCA 90 bp | GACCCACAGCCTAAGGGGCAGCGCTGCTGTCCATTCTGCTGGCAATaGTGGCGGTGTTCATCCAGGACCCCTCGCAGCACCTGCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DPQPKGQRCCPFCWQ*WRCSSRTPRSTCTV Trigger: CACTGTGCAGGTGCTGCGAGGGGTCCTGGATGAACACCGCCAGCATTGCCAGCAGAATGGACAGCAGCGCTGCCCCTTAGGCTGTGGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS GCA 90 bp | TGGGGCAGGCCATCAGCTCAAAGGGGCATGAGTCCTGATGCTCCTTaGGATGAGCCAGAGGGTGTGTGTCCAAGCAGCCGGCTGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: WGRPSAQRGMSPDAP*DEPEGVCPSSRLQR Trigger: ACGCTGCAGCCGGCTGCTTGGACACACACCCTCTGGCTCATCGCAAGGAGCATCAGGACTCATGCCCCTTTGAGCTGATGGCCTGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS CCA 90 bp | CCACAGCCTAAGGGGCAGCGCTGCTGTCCATTCTGCTGGCAATGCTaGCGGTGTTCATCCAGGACCCCTCGCAGCACCTGCACAGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PQPKGQRCCPFCWQC*RCSSRTPRSTCTVQ Trigger: TTGCACTGTGCAGGTGCTGCGAGGGGTCCTGGATGAACACCGCCAGCATTGCCAGCAGAATGGACAGCAGCGCTGCCCCTTAGGCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS CCA 90 bp | GTTCATCCAGGACCCCTCGCAGCACCTGCACAGTGCAACCCTCATTaGGGCAGGCCATCAGCTCAAAGGGGCATGAGTCCTGATGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VHPGPLAAPAQCNPH*GRPSAQRGMSPDAP Trigger: AGGAGCATCAGGACTCATGCCCCTTTGAGCTGATGGCCTGCCCCAATGAGGGTTGCACTGTGCAGGTGCTGCGAGGGGTCCTGGATGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS CCA 90 bp | TTATCATCATCCTCCAGGAAGTTGCTCAGCTGTGCCAGCTGCTGGTaGATGATGCTGGTGGTGAGGTGCACCCGGCGTACACGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSSRKLLSCASCW*MMLVVRCTRRTRPS Trigger: GCTGGGGCGTGTACGCCGGGTGCACCTCACCACCAGCATCATCCACCAGCAGCTGGCACAGCTGAGCAACTTCCTGGAGGATGATGATAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS CCA 90 bp | AGGTTATCATCATCCTCCAGGAAGTTGCTCAGCTGTGCCAGCTGCTaGTGGATGATGCTGGTGGTGAGGTGCACCCGGCGTACACGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLSSSSRKLLSCASC*WMMLVVRCTRRTRP Trigger: GGGGCGTGTACGCCGGGTGCACCTCACCACCAGCATCATCCACCAGCAGCTGGCACAGCTGAGCAACTTCCTGGAGGATGATGATAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS TCA 90 bp | CACAGTGCAACCCTCATTGGGGCAGGCCATCAGCTCAAAGGGGCATaGGTCCTGATGCTCCTTGCGATGAGCCAGAGGGTGTGTGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSATLIGAGHQLKGA*VLMLLAMSQRVCVQ Trigger: TTGGACACACACCCTCTGGCTCATCGCAAGGAGCATCAGGACTCATGCCCCTTTGAGCTGATGGCCTGCCCCAATGAGGGTTGCACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS GCA 90 bp | ATTCAGGAGCAGGTTATCATCATCCTCCAGGAAGTTGCTCAGCTGTaGCAGCTGCTGGTGGATGATGCTGGTGGTGAGGTGCACCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: IQEQVIIILQEVAQL*QLLVDDAGGEVHPA Trigger: CGCCGGGTGCACCTCACCACCAGCATCATCCACCAGCAGCTGGCACAGCTGAGCAACTTCCTGGAGGATGATGATAACCTGCTCCTGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGAGACCCATGGAGAGACAAGGTGGGTTAACGAAGAAGGGAAGAGCTTTAACCTCGTTGGCCTCTaGAGAACCCCATGGCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: VQETHGETRWVNEEGKSFNLVGL*RTPWQT Trigger: TGTCTGCCATGGGGTTCTCAAGAGGCCAACGAGGTT...AAAGCTCTTCCCTTCTTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGAACAGTCCAGGGAAGAAAGGGCAGTGTCTAATATGGAAGATTTGCAGTCATCCTCCAGGAAGTaGCTCAGCTGTGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGEQSREERAVSNMEDLQSSSRK*LSCASC Trigger: GCAGCTGGCACAGCTGAGCAACTTCCTGGAGGATGA...CTGCAAATCTTCCATATTAGACACTGCCCTTTCTTCCCTGGACTGTTCTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR CAA 90 bp | GGTAGGAAAGTGCAGGAGACCCATGGAGAGACAAGGTGGGTTAACGAAGAAGGGCGACCATCTTTCTCCTaGTCACCTCTTTTCTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRKVQETHGETRWVNEEGRPSFS*SPLFYS Trigger: GCTGTAGAAAAGAGGTGACAAGGAGAAAGATGGTCG...CCCTTCTTCGTTAACCCACCTTGTCTCTCCATGGGTCTCCTGCACTTTCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS-3UTR CAA 90 bp | CTAATATGGAAGATTTGCAGGGATGACAAGGACAACGGAACAGAGAAGGCAAGGGGTAACCTCAGTCTCTaGCACCTGGGCATTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LIWKICRDDKDNGTEKARGNLSL*HLGIQE Trigger: CTCCTGAATGCCCAGGTGCAAGAGACTGAGGTTACC...CCTTGCCTTCTCTGTTCCGTTGTCCTTGTCATCCCTGCAAATCTTCCATATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS GCA 72 bp | TGTGCCAGCTGCTGGTGGATGATGCTGGTGGTGAGGTaGACCCGGCGTACACGCCCCAGCAGGCCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CASCWWMMLVVR*TRRTRPSRPSS Trigger: GCTGCTGGGCCTGCTGGGGCGTGTACGCCGGGTGCACCTCACCACCAGCATCATCCACCAGCAGCTGGCACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS GCA 72 bp | CCTAAGGGGCAGCGCTGCTGTCCATTCTGCTGGCAATaGTGGCGGTGTTCATCCAGGACCCCTCGCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PKGQRCCPFCWQ*WRCSSRTPRST Trigger: GGTGCTGCGAGGGGTCCTGGATGAACACCGCCAGCATTGCCAGCAGAATGGACAGCAGCGCTGCCCCTTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS CCA 72 bp | AAGGGGCAGCGCTGCTGTCCATTCTGCTGGCAATGCTaGCGGTGTTCATCCAGGACCCCTCGCAGCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KGQRCCPFCWQC*RCSSRTPRSTC Trigger: GCAGGTGCTGCGAGGGGTCCTGGATGAACACCGCCAGCATTGCCAGCAGAATGGACAGCAGCGCTGCCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS GCA 72 bp | GACCCACAGCCTAAGGGGCAGCGCTGCTGTCCATTCTaGTGGCAATGCTGGCGGTGTTCATCCAGGACCCCT | + |
|
Preference number: 6 (lower is better) Translates to: DPQPKGQRCCPF*WQCWRCSSRTP Trigger: AGGGGTCCTGGATGAACACCGCCAGCATTGCCAGCAGAATGGACAGCAGCGCTGCCCCTTAGGCTGTGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS CCA 72 bp | GGACCCCTCGCAGCACCTGCACAGTGCAACCCTCATTaGGGCAGGCCATCAGCTCAAAGGGGCATGAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPLAAPAQCNPH*GRPSAQRGMSP Trigger: AGGACTCATGCCCCTTTGAGCTGATGGCCTGCCCCAATGAGGGTTGCACTGTGCAGGTGCTGCGAGGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS GCA 72 bp | GGTGTTCATCCAGGACCCCTCGCAGCACCTGCACAGTaGAACCCTCATTGGGGCAGGCCATCAGCTCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVHPGPLAAPAQ*NPHWGRPSAQR Trigger: CCTTTGAGCTGATGGCCTGCCCCAATGAGGGTTGCACTGTGCAGGTGCTGCGAGGGGTCCTGGATGAACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS TCA 72 bp | ACCCTCATTGGGGCAGGCCATCAGCTCAAAGGGGCATaGGTCCTGATGCTCCTTGCGATGAGCCAGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TLIGAGHQLKGA*VLMLLAMSQRV Trigger: CACCCTCTGGCTCATCGCAAGGAGCATCAGGACTCATGCCCCTTTGAGCTGATGGCCTGCCCCAATGAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS CAA 72 bp | AGAGGGTGTGTGTCCAAGCAGCCGGCTGCAGCGTTCTaGCACTTGACTTGTAGGCGGCCAATGGTTTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RGCVSKQPAAAF*HLTCRRPMVFR Trigger: CCGAAAAACCATTGGCCGCCTACAAGTCAAGTGCAAGAACGCTGCAGCCGGCTGCTTGGACACACACCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS CAA 90 bp | GCCAGAGGGTGTGTGTCCAAGCAGCCGGCTGCAGCGTTCTTGCACTaGACTTGTAGGCGGCCAATGGTTTTTCGGAGTTTATTCACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: ARGCVSKQPAAAFLH*TCRRPMVFRSLFTS Trigger: CGAAGTGAATAAACTCCGAAAAACCATTGGCCGCCTACAAGTCAAGTGCAAGAACGCTGCAGCCGGCTGCTTGGACACACACCCTCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS CAA 72 bp | TGTGTGTCCAAGCAGCCGGCTGCAGCGTTCTTGCACTaGACTTGTAGGCGGCCAATGGTTTTTCGGAGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: CVSKQPAAAFLH*TCRRPMVFRSL Trigger: TAAACTCCGAAAAACCATTGGCCGCCTACAAGTCAAGTGCAAGAACGCTGCAGCCGGCTGCTTGGACACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||
| CDS TCA 72 bp | GCTAGCCACCTGAAGATGCACTTTTTACAGAAGATGTaGCTGCACGGCAACCTCGTTGGCCTCTTGAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: ASHLKMHFLQKM*LHGNLVGLLRT Trigger: GGTTCTCAAGAGGCCAACGAGGTTGCCGTGCAGTCACATCTTCTGTAAAAAGTGCATCTTCAGGTGGCTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS CCA 72 bp | CTTTTTACAGAAGATGTGACTGCACGGCAACCTCGTTaGCCTCTTGAGAACCCCATGGCAGACAGAACACAG | + |
|
Preference number: 6 (lower is better) Translates to: LFTEDVTARQPR*PLENPMADRTQ Trigger: CTGTGTTCTGTCTGCCATGGGGTTCTCAAGAGGCCAACGAGGTTGCCGTGCAGTCACATCTTCTGTAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008626.10 |
||
| CDS TCA 72 bp | TACAGCATGGACAGGTGTTTTGTCTGGCTAGCCACCTaGAGATGCACTTTTTACAGAAGATGTGACTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: YSMDRCFVWLAT*RCTFYRRCDCT Trigger: CGTGCAGTCACATCTTCTGTAAAAAGTGCATCTTCAGGTGGCTAGCCAGACAAAACACCTGTCCATGCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008626.10 ENSMUST00000234399.2 |
||