Pregenerated sensors for RNF145 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019189Ensembl transcript IDs: ENSMUST00000019333.10, ENSMUST00000101327.3
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATGTAGCCCTGGGTGCTTGGAACTCACAGGGATTCACCTGCCTCTaGCTACAGAGTGCTGGGATTAAGACAGTACCATCATGCCCGGCT | + |
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Preference number: 1 (lower is better) Translates to: YVALGAWNSQGFTCL*LQSAGIKTVPSCPA Trigger: AGCCGGGCATGATGGTACTGTCTTAATCCCAGCACTCTGTAGGCAGAGGCAGGTGAATCCCTGTGAGTTCCAAGCACCCAGGGCTACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR CCA 90 bp | GGATATGGTCCAAGTGCACAGAACAGGCACGAGACCTGGCTTGAGTaGCAACTGTGCCTGTTGTCACAGTGTCACCAGGGAGATGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: GYGPSAQNRHETWLE*QLCLLSQCHQGDVL Trigger: GAGAACATCTCCCTGGTGACACTGTGACAACAGGCACAGTTGCCACTCAAGCCAGGTCTCGTGCCTGTTCTGTGCACTTGGACCATATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR TCA 90 bp | AGTAATCCCAGCACTGAGAGGAGAGGGGAAACAGAGACAGGAAGATaGCCACTAGGTCTTGCTAGCTACGAAGCCCAGCCAGTTCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: SNPSTERRGETETGR*PLGLASYEAQPVPG Trigger: ACCTGGAACTGGCTGGGCTTCGTAGCTAGCAAGACCTAGTGGTCATCTTCCTGTCTCTGTTTCCCCTCTCCTCTCAGTGCTGGGATTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR GCA 90 bp | TGTCCACTGAGTAGCCTGGAGCAGATCCTCGGAATGTCAGGTTCCTaGCTAGTCCTCTCCTACATCCACTCCTCAGATCTGAGTGTGAAC | + |
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Preference number: 1 (lower is better) Translates to: CPLSSLEQILGMSGS*LVLSYIHSSDLSVN Trigger: GTTCACACTCAGATCTGAGGAGTGGATGTAGGAGAGGACTAGGCAGGAACCTGACATTCCGAGGATCTGCTCCAGGCTACTCAGTGGACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR GCA 90 bp | CCAGGTCCACCTCTGCCTTCATCTTCCCACTCTGACCTCCAGATCTaGGTCCTCTTAGCCCCTTTCAAGCACTCAGACCTGATTTCATTA | + |
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Preference number: 1 (lower is better) Translates to: PGPPLPSSSHSDLQI*VLLAPFKHSDLISL Trigger: TAATGAAATCAGGTCTGAGTGCTTGAAAGGGGCTAAGAGGACGCAGATCTGGAGGTCAGAGTGGGAAGATGAAGGCAGAGGTGGACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR GCA 90 bp | TCTCACTATGTAGCCCTGGGTGCTTGGAACTCACAGGGATTCACCTaGCTCTGCCTACAGAGTGCTGGGATTAAGACAGTACCATCATGC | + |
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Preference number: 1 (lower is better) Translates to: SHYVALGAWNSQGFT*LCLQSAGIKTVPSC Trigger: GCATGATGGTACTGTCTTAATCCCAGCACTCTGTAGGCAGAGGCAGGTGAATCCCTGTGAGTTCCAAGCACCCAGGGCTACATAGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR TCA 90 bp | AACATACCCACAAATCGCTTTCTGTACCCTGGTCCCCATGGCAGCTaGACACACACTATTTCAGTCCACATATCCCTTCACTCCATAGGC | + |
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Preference number: 1 (lower is better) Translates to: NIPTNRFLYPGPHGS*THTISVHISLHSIG Trigger: GCCTATGGAGTGAAGGGATATGTGGACTGAAATAGTGTGTGTTCAGCTGCCATGGGGACCAGGGTACAGAAAGCGATTTGTGGGTATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR GCA 90 bp | CCCATCTTGATTAAACACAGTGGTATGATACTGCTAAAAGCAGCCTaGCTACCTGACTTCCCAGACCCAAGTTCCCAGACTTCCAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: PILIKHSGMILLKAA*LPDFPDPSSQTSKG Trigger: ACCCTTGGAAGTCTGGGAACTTGGGTCTGGGAAGTCAGGTAGGCAGGCTGCTTTTAGCAGTATCATACCACTGTGTTTAATCAAGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR GCA 90 bp | ATTAGTTACATTTGTTCAGACAGGATCTCACTATGTAGCCCTGGGTaGTTGGAACTCACAGGGATTCACCTGCCTCTGCCTACAGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: ISYICSDRISLCSPG*LELTGIHLPLPTEC Trigger: GCACTCTGTAGGCAGAGGCAGGTGAATCCCTGTGAGTTCCAAGCACCCAGGGCTACATAGTGAGATCCTGTCTGAACAAATGTAACTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR TCA 90 bp | GCACATCCTGACGTACCGTGCTCCTCCATCTCGGAGGAAAGTCAATaGGTCCCGTCTACATCTTTGATTTCATTGCGGTTCTGTAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: AHPDVPCSSISEESQ*VPSTSLISLRFCRK Trigger: TTTTCTACAGAACCGCAATGAAATCAAAGATGTAGACGGGACTCATTGACTTTCCTCCGAGATGGAGGAGCACGGTACGTCAGGATGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR GCA 90 bp | ACCTGCCTCTGCCTACAGAGTGCTGGGATTAAGACAGTACCATCATaGCCGGCTACCACAAATAATTTAAGCCATTTTACCTCCTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: TCLCLQSAGIKTVPS*PATTNNLSHFTSCH Trigger: ATGGCAGGAGGTAAAATGGCTTAAATTATTTGTGGTAGCCGGGCATGATGGTACTGTCTTAATCCCAGCACTCTGTAGGCAGAGGCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR GCA 90 bp | AGGACATCTGGTACTCTCCTCTGCATGTGCATGTCAATACATGTGTaGACGCCAATACCAATACATGTGTGCATATACTCCCACATACGC | + |
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Preference number: 1 (lower is better) Translates to: RTSGTLLCMCMSIHV*TPIPIHVCIYSHIR Trigger: GCGTATGTGGGAGTATATGCACACATGTATTGGTATTGGCGTGCACACATGTATTGACATGCACATGCAGAGGAGAGTACCAGATGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR GCA 90 bp | TTATTATCTATCACCTTCAAGTGCAGTAAATTTCAAAGAGCGCCTTaGCCACACCTCCAGAACCATGCAATTTCACAGGATGGCAAACAT | + |
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Preference number: 1 (lower is better) Translates to: LLSITFKCSKFQRAP*PHLQNHAISQDGKH Trigger: ATGTTTGCCATCCTGTGAAATTGCATGGTTCTGGAGGTGTGGGCAAGGCGCTCTTTGAAATTTACTGCACTTGAAGGTGATAGATAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR GCA 90 bp | GAGTGGGGTCATACAGTCCAGTACTCATTCCCAGAGTGCAAACACTaGCATAATTTAACACTGCTTTTGATTCAGTTGCAAGAATTAAAC | + |
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Preference number: 1 (lower is better) Translates to: EWGHTVQYSFPECKH*HNLTLLLIQLQELN Trigger: GTTTAATTCTTGCAACTGAATCAAAAGCAGTGTTAAATTATGGCAGTGTTTGCACTCTGGGAATGAGTACTGGACTGTATGACCCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR GCA 90 bp | ACATCTCAGCAAGGTCTTTACTTTTTATTATCTATCACCTTCAAGTaGAGTAAATTTCAAAGAGCGCCTTGCCCACACCTCCAGAACCAT | + |
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Preference number: 1 (lower is better) Translates to: TSQQGLYFLLSITFK*SKFQRAPCPHLQNH Trigger: ATGGTTCTGGAGGTGTGGGCAAGGCGCTCTTTGAAATTTACTGCACTTGAAGGTGATAGATAATAAAAAGTAAAGACCTTGCTGAGATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGCACCCGCAAGGCCTAGTGCACGCCCGCCCCTTCCCCAGGCACATCCTGACTTCATCTTCCCACTCTaGCCTCCAGATCTGCGTCCT | + |
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Preference number: 2 (lower is better) Translates to: RAPARPSARPPLPQAHPDFIFPL*PPDLRP Trigger: AGGACGCAGATCTGGAGGTCAGAGTGGGAAGATGAA...GTCAGGATGTGCCTGGGGAAGGGGCGGGCGTGCACTAGGCCTTGCGGGTGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR CAA 90 bp | GCACAGAACAGGCACGAGACCTGGCTTGAGTGGCAACTGTGCCTGTaGTCACAGTGTCACCAGGGAGATGTTCTCCTGCACTCTCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: AQNRHETWLEWQLCL*SQCHQGDVLLHSPH Trigger: GTGAGGAGAGTGCAGGAGAACATCTCCCTGGTGACACTGTGACAACAGGCACAGTTGCCACTCAAGCCAGGTCTCGTGCCTGTTCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCCAGGTCCACCTCTGCCTTCATCTTCCCACTCTGACCTCCAGATCTGCGATTTCTCCAACAGCATaGAGTGGGGTGGAGAGCGGG | + |
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Preference number: 2 (lower is better) Translates to: ESQVHLCLHLPTLTSRSAISPTA*SGVESG Trigger: CCCGCTCTCCACCCCACTTCATGCTGTTGGAGAAAT...CGCAGATCTGGAGGTCAGAGTGGGAAGATGAAGGCAGAGGTGGACCTGGCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR-3UTR GCA 90 bp | CAGTACACCCAGGGCCTTTATCAGTTCCCTAAAGCCCCTCCCACTTTGGCTCCTAGCCAGGTCCACCTCTaGCTTCATCTTCCCACTCTG | + |
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Preference number: 2 (lower is better) Translates to: QYTQGLYQFPKAPPTLAPSQVHL*LHLPTL Trigger: CAGAGTGGGAAGATGAAGGCAGAGGTGGACCTGGCT...AGGAGCCAAAGTGGGAGGGGCTTTAGGGAACTGATAAAGGCCCTGGGTGTACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCCTCTGCCTACAGAGTGCTGGGATTAAGACAGTACCATCATGCCCGGCTTCGCTTTCTGTACCCTaGTCCCCATGGCAGCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: TCLCLQSAGIKTVPSCPASLSVP*SPWQLN Trigger: GTTCAGCTGCCATGGGGACCAGGGTACAGAAAGCGA...AGCCGGGCATGATGGTACTGTCTTAATCCCAGCACTCTGTAGGCAGAGGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCCACTGTTTTGCATGGCTGTGATGGGTAGGGTCCTCAGGGACTTCACCCCACAAATAGTAAGCAACTaGTGCCCCTACAACCGCTGT | + |
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Preference number: 2 (lower is better) Translates to: GPLFCMAVMGRVLRDFTPQIVSN*CPYNRC Trigger: ACAGCGGTTGTAGGGGCAGCAGTTGCTTACTATTTG...TGGGGTGAAGTCCCTGAGGACCCTACCCATCACAGCCATGCAAAACAGTGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR GCA 90 bp | CCTTCAAGTGCAGTAAATTTCAAAGAGCGCCTTGCCCACACCTCCAGAACCATGCGTTGCTATGGCAACTaGTGGCTGCTCCAATGGCGC | + |
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Preference number: 2 (lower is better) Translates to: PSSAVNFKERLAHTSRTMRCYGN*WLLQWR Trigger: GCGCCATTGGAGCAGCCAGCAGTTGCCATAGCAACG...CATGGTTCTGGAGGTGTGGGCAAGGCGCTCTTTGAAATTTACTGCACTTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCCTCTGCCTACAGAGTGCTGGGATTAAGACAGTACCATCATGCCCGGCTAGCAAGTGCACTTTCTaGGGATGGCCCACTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: TCLCLQSAGIKTVPSCPASKCTF*GWPTVL Trigger: CAAAACAGTGGGCCATCCCCAGAAAGTGCACTTGCT...AGCCGGGCATGATGGTACTGTCTTAATCCCAGCACTCTGTAGGCAGAGGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTCAAGTGCAGTAAATTTCAAAGAGCGCCTTGCCCACACCTCCAGAACCATGATGCGCACGTTGCTATaGCAACTGCTGGCTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PSSAVNFKERLAHTSRTMMRTLL*QLLAAP Trigger: TGGAGCAGCCAGCAGTTGCCATAGCAACGTGCGCAT...CATGGTTCTGGAGGTGTGGGCAAGGCGCTCTTTGAAATTTACTGCACTTGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTACACCCAGGGCCTTTATCAGTTCCCTAAAGCCCCTCCCACTTTGGCTCCTGTGGTTTTAATTAACTaGAGGAAAGGGGAGTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: QYTQGLYQFPKAPPTLAPVVLIN*RKGEWP Trigger: TGGCCACTCCCCTTTCCTTCAGTTAATTAAAACCAC...AGGAGCCAAAGTGGGAGGGGCTTTAGGGAACTGATAAAGGCCCTGGGTGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR-3UTR GCA 90 bp | TGCACTAGAAGCCTTCTGCCTCTTCAGCAAAAATTCAGGCTGCAGCAACACATCCAGGATGTGGCTGTGTaGACCAGTAATCCCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: CTRSLLPLQQKFRLQQHIQDVAV*TSNPST Trigger: AGTGCTGGGATTACTGGTGCACACAGCCACATCCTG...GATGTGTTGCTGCAGCCTGAATTTTTGCTGAAGAGGCAGAAGGCTTCTAGTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR TCA 90 bp | TCAAGAGCTAATTGTACTTGGAGAAGAAGGCAGGCTGGGAACAAATTCACAGTCGCCACCATCAATGCCTaGCTCAGTCTACCCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: SRANCTWRRRQAGNKFTVATINA*LSLPWM Trigger: CATCCAGGGTAGACTGAGTCAGGCATTGATGGTGGC...GACTGTGAATTTGTTCCCAGCCTGCCTTCTTCTCCAAGTACAATTAGCTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTCAAGTGCAGTAAATTTCAAAGAGCGCCTTGCCCACACCTCCAGAACCATGATTCCTTCTCACTGCTaGTGTGCCTTTCCCATCACT | + |
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Preference number: 2 (lower is better) Translates to: PSSAVNFKERLAHTSRTMIPSHC*CAFPIT Trigger: AGTGATGGGAAAGGCACATCAGCAGTGAGAAGGAAT...CATGGTTCTGGAGGTGTGGGCAAGGCGCTCTTTGAAATTTACTGCACTTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR TCA 90 bp | TGCACTAGAAGCCTTCTGCCTCTTCAGCAAAAATTCAGGCTGCAGCAACACATCCTGAAAACCCAGGTTTaGCTCATTTGGGGCTTGTCA | + |
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Preference number: 2 (lower is better) Translates to: CTRSLLPLQQKFRLQQHILKTQV*LIWGLS Trigger: TGACAAGCCCCAAATGAGTCAAACCTGGGTTTTCAG...GATGTGTTGCTGCAGCCTGAATTTTTGCTGAAGAGGCAGAAGGCTTCTAGTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGGAAAGCCAGGTCCACCTCTGCCTTCATCTTCCCACTCTGACCTCCAGAGAGGTTAAGTTTTCTTaGCAAACCTCTACAAAACAT | + |
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Preference number: 2 (lower is better) Translates to: EGESQVHLCLHLPTLTSREVKFS*QTSTKH Trigger: ATGTTTTGTAGAGGTTTGCCAAGAAAACTTAACCTC...TCTGGAGGTCAGAGTGGGAAGATGAAGGCAGAGGTGGACCTGGCTTTCCCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTTCTCAGAGTTCCCTACCTGACCAATCATTATCAAGCAAGAGCCTCCTTCATAGCCTAATGATCTaGGCACTAACCCACCCTATT | + |
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Preference number: 2 (lower is better) Translates to: GASQSSLPDQSLSSKSLLHSLMI*ALTHPI Trigger: AATAGGGTGGGTTAGTGCCCAGATCATTAGGCTATG...AAGGAGGCTCTTGCTTGATAATGATTGGTCAGGTAGGGAACTCTGAGAAGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR TCA 90 bp | TTCAAAGTCAATCTCAGTGGAAATGACAAATGTCGACCCTATCTAAGCTCACAAAGCAGCCTGCCTACCTaGCTTCCCAGACCCAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: FKVNLSGNDKCRPYLSSQSSLPT*LPRPKF Trigger: GAACTTGGGTCTGGGAAGTCAGGTAGGCAGGCTGCT...TTGTGAGCTTAGATAGGGTCGACATTTGTCATTTCCACTGAGATTGACTTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR GCA 90 bp | TGCACTAGAAGCCTTCTGCCTCTTCAGCAAAAATTCAGGCTGCAGCAACACATCACTCTCCTCTGCATGTaGATGTCAATACATGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: CTRSLLPLQQKFRLQQHITLLCM*MSIHVC Trigger: GCACACATGTATTGACATGCACATGCAGAGGAGAGT...GATGTGTTGCTGCAGCCTGAATTTTTGCTGAAGAGGCAGAAGGCTTCTAGTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR TCA 90 bp | TTCAAAGTCAATCTCAGTGGAAATGACAAATGTCGACCCTATCTAAGCTCACAATGTTTTGCATGGCTGTaGTGGGTAGGGTCCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FKVNLSGNDKCRPYLSSQCFAWL*WVGSSG Trigger: CCCTGAGGACCCTACCCATCACAGCCATGCAAAACA...TTGTGAGCTTAGATAGGGTCGACATTTGTCATTTCCACTGAGATTGACTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR GCA 90 bp | TTCAAAGTCAATCTCAGTGGAAATGACAAATGTCGACCCTATCTAAGCTCACAAGATGGCCCACTGTTTTaGATGGCTGTGATGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: FKVNLSGNDKCRPYLSSQDGPLF*MAVMGR Trigger: CCTACCCATCACAGCCATGCAAAACAGTGGGCCATC...TTGTGAGCTTAGATAGGGTCGACATTTGTCATTTCCACTGAGATTGACTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR CCA 90 bp | CATACAGTCCAGTACTCATTCCCAGAGTGCAAACACTGCCATAATTTAACACTGAACATTACACAGGATTaGACAGTACACCCAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: HTVQYSFPECKHCHNLTLNITQD*TVHPGP Trigger: AGGCCCTGGGTGTACTGTCCAATCCTGTGTAATGTT...CAGTGTTAAATTATGGCAGTGTTTGCACTCTGGGAATGAGTACTGGACTGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR CAA 90 bp | CATACGCAAACAACCTTAAATCCTGAAAACCCAGGTTTGACTCATTaGGGGCTTGTCATAAACTATCTAGGACAGGCTAAGGCAAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: HTQTTLNPENPGLTH*GLVINYLGQAKASK Trigger: CTTGCTTGCCTTAGCCTGTCCTAGATAGTTTATGACAAGCCCCAAATGAGTCAAACCTGGGTTTTCAGGATTTAAGGTTGTTTGCGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR CCA 90 bp | TCAAGAGCTAATTGTACTTGGAGAAGAAGGCAGGCTGGGAACAAATTCACAGTCACTACCAGAACCTCATaGTTTTTGGCCTTAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: SRANCTWRRRQAGNKFTVTTRTS*FLALEQ Trigger: CTGTTCTAAGGCCAAAAACCATGAGGTTCTGGTAGT...GACTGTGAATTTGTTCCCAGCCTGCCTTCTTCTCCAAGTACAATTAGCTCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAATAATTTAAGCCATTTTACCTCCTGCCATTCTGCACTAGAAGCCTTCTGCAAGGAAGAGAAAGACTaGCAAATAGTAAGCAACTGC | + |
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Preference number: 2 (lower is better) Translates to: TNNLSHFTSCHSALEAFCKEEKD*QIVSNC Trigger: GCAGTTGCTTACTATTTGGCAGTCTTTCTCTTCCTT...GCAGAAGGCTTCTAGTGCAGAATGGCAGGAGGTAAAATGGCTTAAATTATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAATAATTTAAGCCATTTTACCTCCTGCCATTCTGCACTAGAAGCCTTCTGCAAGAATATGAGGATATaGTCCAAGTGCACAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: TNNLSHFTSCHSALEAFCKNMRI*SKCTEQ Trigger: CTGTTCTGTGCACTTGGACCATATCCTCATATTCTT...GCAGAAGGCTTCTAGTGCAGAATGGCAGGAGGTAAAATGGCTTAAATTATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR TCA 90 bp | ACAAATAATTTAAGCCATTTTACCTCCTGCCATTCTGCACTAGAAGCCTTCTGCTGTGATCACTTATCCTaGGAAGGTATAAAAGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: TNNLSHFTSCHSALEAFCCDHLS*EGIKAK Trigger: CTTAGCTTTTATACCTTCTCAGGATAAGTGATCACA...GCAGAAGGCTTCTAGTGCAGAATGGCAGGAGGTAAAATGGCTTAAATTATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR TCA 90 bp | AAAATTCAGGCTGCAGCAACACATCTCAGCAAGGTCTTTACTTTTTATTATCTAAAAGAGATAGCTCAGTaGGTACTGCACACACATGAG | + |
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Preference number: 2 (lower is better) Translates to: KIQAAATHLSKVFTFYYLKEIAQ*VLHTHE Trigger: CTCATGTGTGTGCAGTACTCACTGAGCTATCTCTTT...TAGATAATAAAAAGTAAAGACCTTGCTGAGATGTGTTGCTGCAGCCTGAATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR CAA 90 bp | TACTCATTCCCAGAGTGCAAACACTGCCATAATTTAACACTGCTTTaGATTCAGTTGCAAGAATTAAACATTACACAGGATTGGACAGTA | + |
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Preference number: 2 (lower is better) Translates to: YSFPECKHCHNLTLL*IQLQELNITQDWTV Trigger: TACTGTCCAATCCTGTGTAATGTTTAATTCTTGCAACTGAATCAAAAGCAGTGTTAAATTATGGCAGTGTTTGCACTCTGGGAATGAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR-3UTR TCA 90 bp | AAAATTCAGGCTGCAGCAACACATCTCAGCAAGGTCTTTACTTTTTATTATCTAAACAACCTTAAATCCTaGAAACCCAGGTTTGACTCA | + |
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Preference number: 2 (lower is better) Translates to: KIQAAATHLSKVFTFYYLNNLKS*KPRFDS Trigger: TGAGTCAAACCTGGGTTTTCAGGATTTAAGGTTGTT...TAGATAATAAAAAGTAAAGACCTTGCTGAGATGTGTTGCTGCAGCCTGAATTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR GCA 72 bp | CCCGTCCCACGGGAAGGGGAAAGCCAGGTCCACCTCTaGCTTCATCTTCCCACTCTGACCTCCAGATCTGCG | + |
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Preference number: 3 (lower is better) Translates to: PVPREGESQVHL*LHLPTLTSRSA Trigger: CGCAGATCTGGAGGTCAGAGTGGGAAGATGAAGGCAGAGGTGGACCTGGCTTTCCCCTTCCCGTGGGACGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR TCA 72 bp | GCTGCCCCTACAACCGCTGTCGCCACCATCAATGCCTaGCTCAGTCTACCCTGGATGGTCACTGACAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: AAPTTAVATINA*LSLPWMVTDRG Trigger: GCCTCTGTCAGTGACCATCCAGGGTAGACTGAGTCAGGCATTGATGGTGGCGACAGCGGTTGTAGGGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR-3UTR CAA 90 bp | GCACCCGCAAGGCCTAGTGCACGCCCGCCCCTTCCCCAGGCACATCCTGACGTAGGGCCATTCCTGAAGTaGCTGAGGTTAAGTTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: APARPSARPPLPQAHPDVGPFLK*LRLSFL Trigger: AAGAAAACTTAACCTCAGCAACTTCAGGAATGGCCC...TACGTCAGGATGTGCCTGGGGAAGGGGCGGGCGTGCACTAGGCCTTGCGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| 3UTR-3UTR CAA 90 bp | GCACCCGCAAGGCCTAGTGCACGCCCGCCCCTTCCCCAGGCACATCCTGACGTAGTCCCGTCTACATCTTaGATTTCATTGCGGTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: APARPSARPPLPQAHPDVVPSTS*ISLRFC Trigger: ACAGAACCGCAATGAAATCAAAGATGTAGACGGGAC...TACGTCAGGATGTGCCTGGGGAAGGGGCGGGCGTGCACTAGGCCTTGCGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGCACCCGCAAGGCCTAGTGCACGCCCGCCCCTTCCCCAGGCACATCCTGACGACATCTTTGATTTCATaGCGGTTCTGTAGAAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: EHPQGLVHARPFPRHILTTSLIS*RFCRKL Trigger: GAGTTTTCTACAGAACCGCAATGAAATCAAAGATGT...CGTCAGGATGTGCCTGGGGAAGGGGCGGGCGTGCACTAGGCCTTGCGGGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| 3UTR GCA 72 bp | TCCCAGCACCCGCCTAAAATCCAGGATGTGGCTGTGTaGACCAGTAATCCCAGCACTGAGAGGAGAGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SQHPPKIQDVAV*TSNPSTERRGE Trigger: TTCCCCTCTCCTCTCAGTGCTGGGATTACTGGTGCACACAGCCACATCCTGGATTTTAGGCGGGTGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR CCA 72 bp | CCACTCCTCAGATCTGAGTGTGAACTCCACCTTGGGTaGCCTTCTCCACAGTCCAGAGCTCCAAGCCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PLLRSECELHLG*PSPQSRAPSLL Trigger: AAGCAGGCTTGGAGCTCTGGACTGTGGAGAAGGCCACCCAAGGTGGAGTTCACACTCAGATCTGAGGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| 3UTR GCA 72 bp | CCTCTGCCTTCATCTTCCCACTCTGACCTCCAGATCTaGGTCCTCTTAGCCCCTTTCAAGCACTCAGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLPSSSHSDLQI*VLLAPFKHSDL Trigger: CAGGTCTGAGTGCTTGAAAGGGGCTAAGAGGACGCAGATCTGGAGGTCAGAGTGGGAAGATGAAGGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| 3UTR GCA 72 bp | AGTAGCCTGGAGCAGATCCTCGGAATGTCAGGTTCCTaGCTAGTCCTCTCCTACATCCACTCCTCAGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSLEQILGMSGS*LVLSYIHSSDL Trigger: CAGATCTGAGGAGTGGATGTAGGAGAGGACTAGGCAGGAACCTGACATTCCGAGGATCTGCTCCAGGCTACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| 3UTR GCA 72 bp | GTAGCCCTGGGTGCTTGGAACTCACAGGGATTCACCTaGCTCTGCCTACAGAGTGCTGGGATTAAGACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: VALGAWNSQGFT*LCLQSAGIKTV Trigger: TACTGTCTTAATCCCAGCACTCTGTAGGCAGAGGCAGGTGAATCCCTGTGAGTTCCAAGCACCCAGGGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR CCA 72 bp | AGTTCAGATCCCAGCACCCGCCTAAAATCCAGGATGTaGCTGTGTGCACCAGTAATCCCAGCACTGAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSDPSTRLKSRM*LCAPVIPALRG Trigger: TCCTCTCAGTGCTGGGATTACTGGTGCACACAGCCACATCCTGGATTTTAGGCGGGTGCTGGGATCTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR TCA 72 bp | CAGTGGTATGATACTGCTAAAAGCAGCCTGCCTACCTaGCTTCCCAGACCCAAGTTCCCAGACTTCCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QWYDTAKSSLPT*LPRPKFPDFQG Trigger: CCCTTGGAAGTCTGGGAACTTGGGTCTGGGAAGTCAGGTAGGCAGGCTGCTTTTAGCAGTATCATACCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR GCA 72 bp | CTGGGTGCTTGGAACTCACAGGGATTCACCTGCCTCTaGCTACAGAGTGCTGGGATTAAGACAGTACCATCA | + |
|
Preference number: 3 (lower is better) Translates to: LGAWNSQGFTCL*LQSAGIKTVPS Trigger: TGATGGTACTGTCTTAATCCCAGCACTCTGTAGGCAGAGGCAGGTGAATCCCTGTGAGTTCCAAGCACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR GCA 72 bp | AAGGAAGAGAAAGACTGCCAAATAGTAAGCAACTGCTaGCCCTACAACCGCTGTCGCCACCATCAATGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KEEKDCQIVSNC*PYNRCRHHQCL Trigger: CAGGCATTGATGGTGGCGACAGCGGTTGTAGGGGCAGCAGTTGCTTACTATTTGGCAGTCTTTCTCTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR GCA 72 bp | ATTTGTTCAGACAGGATCTCACTATGTAGCCCTGGGTaGTTGGAACTCACAGGGATTCACCTGCCTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ICSDRISLCSPG*LELTGIHLPLP Trigger: AGGCAGAGGCAGGTGAATCCCTGTGAGTTCCAAGCACCCAGGGCTACATAGTGAGATCCTGTCTGAACAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR TCA 72 bp | GACGTACCGTGCTCCTCCATCTCGGAGGAAAGTCAATaGGTCCCGTCTACATCTTTGATTTCATTGCGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: DVPCSSISEESQ*VPSTSLISLRF Trigger: GAACCGCAATGAAATCAAAGATGTAGACGGGACTCATTGACTTTCCTCCGAGATGGAGGAGCACGGTACGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| 3UTR TCA 72 bp | AATTCTAAGCTTCTCATCTGGCCAGCCAGGGGCCCTTaGGCCAGAGAGAAAAGAGCCCTAGTAACTAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: NSKLLIWPARGP*AREKRALVTNF Trigger: GAAGTTAGTTACTAGGGCTCTTTTCTCTCTGGCTCAAGGGCCCCTGGCTGGCCAGATGAGAAGCTTAGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR TCA 72 bp | ACAAATCGCTTTCTGTACCCTGGTCCCCATGGCAGCTaGACACACACTATTTCAGTCCACATATCCCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TNRFLYPGPHGS*THTISVHISLH Trigger: GTGAAGGGATATGTGGACTGAAATAGTGTGTGTTCAGCTGCCATGGGGACCAGGGTACAGAAAGCGATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR GCA 72 bp | TTAAAGGAAGAGAAAGACTGCCAAATAGTAAGCAACTaGTGCCCCTACAACCGCTGTCGCCACCATCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LKEEKDCQIVSN*CPYNRCRHHQC Trigger: GCATTGATGGTGGCGACAGCGGTTGTAGGGGCAGCAGTTGCTTACTATTTGGCAGTCTTTCTCTTCCTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR CCA 72 bp | CATACCCACAAATCGCTTTCTGTACCCTGGTCCCCATaGCAGCTGAACACACACTATTTCAGTCCACATATC | + |
|
Preference number: 3 (lower is better) Translates to: HTHKSLSVPWSP*QLNTHYFSPHI Trigger: GATATGTGGACTGAAATAGTGTGTGTTCAGCTGCCATGGGGACCAGGGTACAGAAAGCGATTTGTGGGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAAGTCAATCTCAGTGGAAATGACAAATGTCGACCCTATCTAAGCTCACAAGGCACGAGACCTGGCTaGAGTGGCAACTGTGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FKVNLSGNDKCRPYLSSQGTRPG*SGNCAC Trigger: ACAGGCACAGTTGCCACTCAAGCCAGGTCTCGTGCC...TTGTGAGCTTAGATAGGGTCGACATTTGTCATTTCCACTGAGATTGACTTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR TCA 72 bp | CACTTCTCAGGTAGGGGCTTCTCAGAGTTCCCTACCTaGCCAATCATTATCAAGCAAGAGCCTCCTTATTAC | + |
|
Preference number: 3 (lower is better) Translates to: HFSGRGFSEFPT*PIIIKQEPPYY Trigger: GTAATAAGGAGGCTCTTGCTTGATAATGATTGGTCAGGTAGGGAACTCTGAGAAGCCCCTACCTGAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR GCA 72 bp | ATTAAACACAGTGGTATGATACTGCTAAAAGCAGCCTaGCTACCTGACTTCCCAGACCCAAGTTCCCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: IKHSGMILLKAA*LPDFPDPSSQT Trigger: AGTCTGGGAACTTGGGTCTGGGAAGTCAGGTAGGCAGGCTGCTTTTAGCAGTATCATACCACTGTGTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR GCA 72 bp | CCGGCTACCACAAATAATTTAAGCCATTTTACCTCCTaGCATTCTGCACTAGAAGCCTTCTGCCTCTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PATTNNLSHFTS*HSALEAFCLFS Trigger: GCTGAAGAGGCAGAAGGCTTCTAGTGCAGAATGGCAGGAGGTAAAATGGCTTAAATTATTTGTGGTAGCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR GCA 72 bp | GGTACTCTCCTCTGCATGTGCATGTCAATACATGTGTaGACGCCAATACCAATACATGTGTGCATATACTCC | + |
|
Preference number: 3 (lower is better) Translates to: GTLLCMCMSIHV*TPIPIHVCIYS Trigger: GGAGTATATGCACACATGTATTGGTATTGGCGTGCACACATGTATTGACATGCACATGCAGAGGAGAGTACC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR GCA 72 bp | ATCACCTTCAAGTGCAGTAAATTTCAAAGAGCGCCTTaGCCACACCTCCAGAACCATGCAATTTCACAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: ITFKCSKFQRAP*PHLQNHAISQD Trigger: ATCCTGTGAAATTGCATGGTTCTGGAGGTGTGGGCAAGGCGCTCTTTGAAATTTACTGCACTTGAAGGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR CCA 72 bp | TCTGTGAAGCTTCACGTGTCAAGAGCTAATTGTACTTaGAGAAGAAGGCAGGCTGGGAACAAATTCACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SVKLHVSRANCT*RRRQAGNKFTV Trigger: GACTGTGAATTTGTTCCCAGCCTGCCTTCTTCTCCAAGTACAATTAGCTCTTGACACGTGAAGCTTCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR GCA 72 bp | TGCCTACAGAGTGCTGGGATTAAGACAGTACCATCATaGCCGGCTACCACAAATAATTTAAGCCATTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: CLQSAGIKTVPS*PATTNNLSHFT Trigger: GGTAAAATGGCTTAAATTATTTGTGGTAGCCGGGCATGATGGTACTGTCTTAATCCCAGCACTCTGTAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR GCA 72 bp | CTAGAAGCCTTCTGCCTCTTCAGCAAAAATTCAGGCTaGAGCAACACATCTCAGCAAGGTCTTTACTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LEAFCLFSKNSG*SNTSQQGLYFL Trigger: TAAAAAGTAAAGACCTTGCTGAGATGTGTTGCTGCAGCCTGAATTTTTGCTGAAGAGGCAGAAGGCTTCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAAGAGCTAATTGTACTTGGAGAAGAAGGCAGGCTGGGAACAAATTCACAGTCAACTCCATACAGTCTTaGCTCTTTCTTCTTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SRANCTWRRRQAGNKFTVNSIQS*LFLLFS Trigger: AGAGAAAAGAAGAAAGAGCAAAGACTGTATGGAGTT...GACTGTGAATTTGTTCCCAGCCTGCCTTCTTCTCCAAGTACAATTAGCTCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR GCA 72 bp | CAAGGTCTTTACTTTTTATTATCTATCACCTTCAAGTaGAGTAAATTTCAAAGAGCGCCTTGCCCACACCTC | + |
|
Preference number: 3 (lower is better) Translates to: QGLYFLLSITFK*SKFQRAPCPHL Trigger: GAGGTGTGGGCAAGGCGCTCTTTGAAATTTACTGCACTTGAAGGTGATAGATAATAAAAAGTAAAGACCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAATTCAGGCTGCAGCAACACATCTCAGCAAGGTCTTTACTTTTTATTATCTAGCTAAAAGTCCCATCTaGATTAAACACAGTGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: KIQAAATHLSKVFTFYYLAKSPI*IKHSGM Trigger: CATACCACTGTGTTTAATCAAGATGGGACTTTTAGC...TAGATAATAAAAAGTAAAGACCTTGCTGAGATGTGTTGCTGCAGCCTGAATTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| CDS-3UTR GCA 90 bp | GCACCCGCAAGGCCTAGTGCACGCCCGCCCCTTCCCCAGGCACATCCTGACGTATATTCACAGCGTCCCTaGGCAGAAGGAAACTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: APARPSARPPLPQAHPDVYSQRP*AEGNSS Trigger: GGAAGAGTTTCCTTCTGCGCAGGGACGCTGTGAATA...TACGTCAGGATGTGCCTGGGGAAGGGGCGGGCGTGCACTAGGCCTTGCGGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR GCA 90 bp | GCACCCGCAAGGCCTAGTGCACGCCCGCCCCTTCCCCAGGCACATCCTGACGTACTGCTTCTTTGGATCTaGTGGAAAAAGGAGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: APARPSARPPLPQAHPDVLLLWI*WKKELT Trigger: CGTCAGCTCCTTTTTCCAGCAGATCCAAAGAAGCAG...TACGTCAGGATGTGCCTGGGGAAGGGGCGGGCGTGCACTAGGCCTTGCGGGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR GCA 90 bp | TCCAACAGCATGAAGTGGGGTGGAGAGCGGGTGTGTCCACTGAGTAGCCTGGAGAAGCCTCTCCCGGGATaGAGGCTGATCTCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNSMKWGGERVCPLSSLEKPLPG*RLISGA Trigger: AGCACCAGAGATCAGCCTGCATCCCGGGAGAGGCTT...CTCCAGGCTACTCAGTGGACACACCCGCTCTCCACCCCACTTCATGCTGTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR GCA 90 bp | GGCCCACTGTTTTGCATGGCTGTGATGGGTAGGGTCCTCAGGGACTTCACCCCAAAGCCTCTCCCGGGATaGAGGCTGATCTCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLFCMAVMGRVLRDFTPKPLPG*RLISGA Trigger: AGCACCAGAGATCAGCCTGCATCCCGGGAGAGGCTT...TGGGGTGAAGTCCCTGAGGACCCTACCCATCACAGCCATGCAAAACAGTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| CDS-3UTR CCA 90 bp | GAAGGGGAAAGCCAGGTCCACCTCTGCCTTCATCTTCCCACTCTGACCTCCAGAACGGGCACCACCAGCTaGTTCCACAGGGACATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EGESQVHLCLHLPTLTSRTGTTS*FHRDIP Trigger: GGGAATGTCCCTGTGGAACCAGCTGGTGGTGCCCGT...TCTGGAGGTCAGAGTGGGAAGATGAAGGCAGAGGTGGACCTGGCTTTCCCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR TCA 90 bp | GAAAGCCAGGTCCACCTCTGCCTTCATCTTCCCACTCTGACCTCCAGATCTGCGCCAGGATCAGCAGAGTaGCTCCTTCTGTCATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESQVHLCLHLPTLTSRSAPGSAE*LLLSSP Trigger: GGGGGATGACAGAAGGAGTCACTCTGCTGATCCTGG...CGCAGATCTGGAGGTCAGAGTGGGAAGATGAAGGCAGAGGTGGACCTGGCTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR TCA 90 bp | TCAGGTTTAAGAGTCTCAGGCGACACGAGAGCACCCGCAAGGCCTAGTGCACGCTCGCCTTCTGGAATCTaGGGACCCTCTCCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SGLRVSGDTRAPARPSARSPSGI*GPSPAS Trigger: TGATGCTGGAGAGGGTCCTCAGATTCCAGAAGGCGA...GCGTGCACTAGGCCTTGCGGGTGCTCTCGTGTCGCCTGAGACTCTTAAACCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR GCA 90 bp | CACAGGATTGGACAGTACACCCAGGGCCTTTATCAGTTCCCTAAAGCCCCTCCCTTCTCCAGCTGCTCCTaGGTCGCGACAGGGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HRIGQYTQGLYQFPKAPPFSSCS*VATGRD Trigger: GTCTCTCCCTGTCGCGACGCAGGAGCAGCTGGAGAA...GGGAGGGGCTTTAGGGAACTGATAAAGGCCCTGGGTGTACTGTCCAATCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR GCA 90 bp | CAGTACACCCAGGGCCTTTATCAGTTCCCTAAAGCCCCTCCCACTTTGGCTCCTGGCCACGTTCAGCACTaGCTCCAGTTTCTCCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QYTQGLYQFPKAPPTLAPGHVQH*LQFLLR Trigger: GCGAAGGAGAAACTGGAGGCAGTGCTGAACGTGGCC...AGGAGCCAAAGTGGGAGGGGCTTTAGGGAACTGATAAAGGCCCTGGGTGTACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR CCA 90 bp | GAAAGCCAGGTCCACCTCTGCCTTCATCTTCCCACTCTGACCTCCAGATCTGCGCAGCAGCATGATGCTTaGCACCCTCAAGGCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESQVHLCLHLPTLTSRSAQQHDA*HPQGHV Trigger: AACGTGGCCTTGAGGGTGCCAAGCATCATGCTGCTG...CGCAGATCTGGAGGTCAGAGTGGGAAGATGAAGGCAGAGGTGGACCTGGCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR CCA 90 bp | TCAGGTTTAAGAGTCTCAGGCGACACGAGAGCACCCGCAAGGCCTAGTGCACGCACACACTTCGCCTTCTaGAATCTGAGGACCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGLRVSGDTRAPARPSARTHFAF*NLRTLS Trigger: GGAGAGGGTCCTCAGATTCCAGAAGGCGAAGTGTGT...GCGTGCACTAGGCCTTGCGGGTGCTCTCGTGTCGCCTGAGACTCTTAAACCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| 3UTR CAA 72 bp | AGGCACGAGACCTGGCTTGAGTGGCAACTGTGCCTGTaGTCACAGTGTCACCAGGGAGATGTTCTCCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHETWLEWQLCL*SQCHQGDVLLH Trigger: GTGCAGGAGAACATCTCCCTGGTGACACTGTGACAACAGGCACAGTTGCCACTCAAGCCAGGTCTCGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCCTACATCCACTCCTCAGATCTGAGTGTGAACTCCACCTTGGGTGGCCTTGCTGCCTGGGCAGAGTaGGGAGCACGACACTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSYIHSSDLSVNSTLGGLAAWAE*GARHLR Trigger: TCTTAAGTGTCGTGCTCCTCACTCTGCCCAGGCAGC...AAGGCCACCCAAGGTGGAGTTCACACTCAGATCTGAGGAGTGGATGTAGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR GCA 90 bp | ATCCTCGGAATGTCAGGTTCCTGCCTAGTCCTCTCCTACATCCACTCCTCAGATAGCTGCACCAGATGCTaGCTGGGCAGAGTGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILGMSGSCLVLSYIHSSDSCTRC*LGRVRS Trigger: GCTCCTCACTCTGCCCAGGCAGCATCTGGTGCAGCT...ATCTGAGGAGTGGATGTAGGAGAGGACTAGGCAGGAACCTGACATTCCGAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR CCA 90 bp | ATTGCAAAATTTCTCCAACAGCATGAAGTGGGGTGGAGAGCGGGTGTGTCCACTCTGGGTCCCAGTCCCTaGTGGACTCTCATGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IAKFLQQHEVGWRAGVSTLGPSP*WTLMVR Trigger: CCGGACCATGAGAGTCCACCAGGGACTGGGACCCAG...AGTGGACACACCCGCTCTCCACCCCACTTCATGCTGTTGGAGAAATTTTGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR CCA 90 bp | ATTGGACAGTACACCCAGGGCCTTTATCAGTTCCCTAAAGCCCCTCCCACTTTGTCCCCAGAACCTTCCTaGGTCCCAGTCCCTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IGQYTQGLYQFPKAPPTLSPEPS*VPVPGG Trigger: TCCACCAGGGACTGGGACCCAGGAAGGTTCTGGGGA...CAAAGTGGGAGGGGCTTTAGGGAACTGATAAAGGCCCTGGGTGTACTGTCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| 3UTR CAA 72 bp | TACATCCACTCCTCAGATCTGAGTGTGAACTCCACCTaGGGTGGCCTTCTCCACAGTCCAGAGCTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YIHSSDLSVNST*GGLLHSPELQA Trigger: GGCTTGGAGCTCTGGACTGTGGAGAAGGCCACCCAAGGTGGAGTTCACACTCAGATCTGAGGAGTGGATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR GCA 90 bp | GAAGGGGAAAGCCAGGTCCACCTCTGCCTTCATCTTCCCACTCTGACCTCCAGATGCAGCACTCGGCGATaGTTGTCAGGAAAAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGESQVHLCLHLPTLTSRCSTRR*LSGKGR Trigger: TCTTCCTTTTCCTGACAAGCATCGCCGAGTGCTGCA...TCTGGAGGTCAGAGTGGGAAGATGAAGGCAGAGGTGGACCTGGCTTTCCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
||
| CDS-3UTR TCA 90 bp | CCTTCAAGTGCAGTAAATTTCAAAGAGCGCCTTGCCCACACCTCCAGAACCATGGCTGGAAAAAGGAGCTaGCGTCCCAGCGGTAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSSAVNFKERLAHTSRTMAGKRS*RPSGKG Trigger: TCCTTTACCGCTGGGACGTCAGCTCCTTTTTCCAGC...CATGGTTCTGGAGGTGTGGGCAAGGCGCTCTTTGAAATTTACTGCACTTGAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| CDS-3UTR TCA 90 bp | GAAAGCCAGGTCCACCTCTGCCTTCATCTTCCCACTCTGACCTCCAGATCTGCGAATGACTGCAAGGTGTaGTCACAGCGGATTTCATGT | + |
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Preference number: 4 (lower is better) Translates to: ESQVHLCLHLPTLTSRSANDCKV*SQRISC Trigger: ACATGAAATCCGCTGTGATCACACCTTGCAGTCATT...CGCAGATCTGGAGGTCAGAGTGGGAAGATGAAGGCAGAGGTGGACCTGGCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR CCA 90 bp | GTGTGTCCACTGAGTAGCCTGGAGCAGATCCTCGGAATGTCAGGTTCCTGCCTATGTCCTGGTAACAGATaGCGCAGATGTCGTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VCPLSSLEQILGMSGSCLCPGNR*RRCRCV Trigger: AACACAACGACATCTGCGCCATCTGTTACCAGGACA...TAGGCAGGAACCTGACATTCCGAGGATCTGCTCCAGGCTACTCAGTGGACACAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR GCA 90 bp | TTGAGTGGCAACTGTGCCTGTTGTCACAGTGTCACCAGGGAGATGTTCTCCTGCCTGCTTCTTTGGATCTaGTGGAAAAAGGAGCTGACG | + |
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Preference number: 4 (lower is better) Translates to: LSGNCACCHSVTREMFSCLLLWI*WKKELT Trigger: CGTCAGCTCCTTTTTCCAGCAGATCCAAAGAAGCAG...GCAGGAGAACATCTCCCTGGTGACACTGTGACAACAGGCACAGTTGCCACTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| CDS-3UTR GCA 90 bp | GATTTCATTATCCCTCGCAAATCAGGGGCCATTCCTGAAGTTGCTGAGGTTAAGTTGTGTTTCTCCAGCTaGTCCTGCGTCGCGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: DFIIPRKSGAIPEVAEVKLCFSS*SCVATG Trigger: CCCTGTCGCGACGCAGGAGCAGCTGGAGAAACACAA...CTTAACCTCAGCAACTTCAGGAATGGCCCCTGATTTGCGAGGGATAATGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR CCA 90 bp | ACATCTTTGATTTCATTGCGGTTCTGTAGAAAACTCCAGGATCATTTGGTGGTTCCCCGCAGGAGGCTGTaGAGCCGCTTCTGTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TSLISLRFCRKLQDHLVVPRRRL*SRFCPQ Trigger: CTGGGGACAGAAGCGGCTCCACAGCCTCCTGCGGGG...AACCACCAAATGATCCTGGAGTTTTCTACAGAACCGCAATGAAATCAAAGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR CCA 90 bp | CATACAGTCCAGTACTCATTCCCAGAGTGCAAACACTGCCATAATTTAACACTGTCAGCAGCCCCCTCCTaGCTAGCCGAGCCTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: HTVQYSFPECKHCHNLTLSAAPS*LAEPLL Trigger: CAACAGAGGCTCGGCTAGCCAGGAGGGGGCTGCTGA...CAGTGTTAAATTATGGCAGTGTTTGCACTCTGGGAATGAGTACTGGACTGTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR TCA 90 bp | CTCTCCTACATCCACTCCTCAGATCTGAGTGTGAACTCCACCTTGGGTGGCCTTAAAGAGGGTTGTTGTTaGGGCTGCTTCTTTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: LSYIHSSDLSVNSTLGGLKEGCC*GCFFGS Trigger: AGATCCAAAGAAGCAGCCTCAACAACAACCCTCTTT...AAGGCCACCCAAGGTGGAGTTCACACTCAGATCTGAGGAGTGGATGTAGGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR GCA 90 bp | TCAAGAGCTAATTGTACTTGGAGAAGAAGGCAGGCTGGGAACAAATTCACAGTCGGCCACGTTCAGCACTaGCTCCAGTTTCTCCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: SRANCTWRRRQAGNKFTVGHVQH*LQFLLR Trigger: GCGAAGGAGAAACTGGAGGCAGTGCTGAACGTGGCC...GACTGTGAATTTGTTCCCAGCCTGCCTTCTTCTCCAAGTACAATTAGCTCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| CDS-3UTR CCA 90 bp | CAAAATTTCTCCAACAGCATGAAGTGGGGTGGAGAGCGGGTGTGTCCACTGAGTCTTCTTTGGATCTGCTaGAAAAAGGAGCTGACGTCC | + |
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Preference number: 4 (lower is better) Translates to: QNFSNSMKWGGERVCPLSLLWIC*KKELTS Trigger: GGACGTCAGCTCCTTTTTCCAGCAGATCCAAAGAAG...ACTCAGTGGACACACCCGCTCTCCACCCCACTTCATGCTGTTGGAGAAATTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR TCA 90 bp | GATTTCATTATCCCTCGCAAATCAGGGGCCATTCCTGAAGTTGCTGAGGTTAAGGGTTCAGGACCTTCCTaGAGTACAATGTTCTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: DFIIPRKSGAIPEVAEVKGSGPS*STMFCS Trigger: CGAGCAGAACATTGTACTTCAGGAAGGTCCTGAACC...CTTAACCTCAGCAACTTCAGGAATGGCCCCTGATTTGCGAGGGATAATGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR CCA 90 bp | GACTATCATTTAAGTAACATACCCACAAATCGCTTTCTGTACCCTGGTCCCCATCAGCAGCATGATGCTTaGCACCCTCAAGGCCACGTT | + |
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Preference number: 4 (lower is better) Translates to: DYHLSNIPTNRFLYPGPHQQHDA*HPQGHV Trigger: AACGTGGCCTTGAGGGTGCCAAGCATCATGCTGCTG...ATGGGGACCAGGGTACAGAAAGCGATTTGTGGGTATGTTACTTAAATGATAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| CDS-3UTR TCA 90 bp | ACATCTTTGATTTCATTGCGGTTCTGTAGAAAACTCCAGGATCATTTGGTGGTTGCTGGAAAAAGGAGCTaGCGTCCCAGCGGTAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: TSLISLRFCRKLQDHLVVAGKRS*RPSGKG Trigger: TCCTTTACCGCTGGGACGTCAGCTCCTTTTTCCAGC...AACCACCAAATGATCCTGGAGTTTTCTACAGAACCGCAATGAAATCAAAGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR TCA 90 bp | ATTAACAGCTTCAAAAGTGGTGTTTGCAGAGTGGGGTCATACAGTCCAGTACTCGCTGATCTCTGGTGCTaGAGTAGGAGTAGATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: INSFKSGVCRVGSYSPVLADLWC*SRSRSE Trigger: TTCAGATCTACTCCTACTTCAGCACCAGAGATCAGC...GAGTACTGGACTGTATGACCCCACTCTGCAAACACCACTTTTGAAGCTGTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR TCA 90 bp | ACATCTTTGATTTCATTGCGGTTCTGTAGAAAACTCCAGGATCATTTGGTGGTTCAACAAAGGACACGGTaGAGACCAAGCCCAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: TSLISLRFCRKLQDHLVVQQRTR*RPSPEG Trigger: CCCTTCTGGGCTTGGTCTTCACCGTGTCCTTTGTTG...AACCACCAAATGATCCTGGAGTTTTCTACAGAACCGCAATGAAATCAAAGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR GCA 90 bp | GATTTCATTATCCCTCGCAAATCAGGGGCCATTCCTGAAGTTGCTGAGGTTAAGCAAAACAATGGGATCTaGGATCTCCAACATGGACTG | + |
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Preference number: 4 (lower is better) Translates to: DFIIPRKSGAIPEVAEVKQNNGI*DLQHGL Trigger: CAGTCCATGTTGGAGATCGCAGATCCCATTGTTTTG...CTTAACCTCAGCAACTTCAGGAATGGCCCCTGATTTGCGAGGGATAATGAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR CCA 90 bp | AAAATTCAGGCTGCAGCAACACATCTCAGCAAGGTCTTTACTTTTTATTATCTAACGGGCACCACCAGCTaGTTCCACAGGGACATTCCC | + |
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Preference number: 4 (lower is better) Translates to: KIQAAATHLSKVFTFYYLTGTTS*FHRDIP Trigger: GGGAATGTCCCTGTGGAACCAGCTGGTGGTGCCCGT...TAGATAATAAAAAGTAAAGACCTTGCTGAGATGTGTTGCTGCAGCCTGAATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| CDS-3UTR TCA 90 bp | GACTATCATTTAAGTAACATACCCACAAATCGCTTTCTGTACCCTGGTCCCCATGCTGATCTCTGGTGCTaGAGTAGGAGTAGATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: DYHLSNIPTNRFLYPGPHADLWC*SRSRSE Trigger: TTCAGATCTACTCCTACTTCAGCACCAGAGATCAGC...ATGGGGACCAGGGTACAGAAAGCGATTTGTGGGTATGTTACTTAAATGATAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| 3UTR CAA 72 bp | TCATTATCCCTCGCAAATCAGGGGCCATTCCTGAAGTaGCTGAGGTTAAGTTTTCTTGGCAAACCTCTACAA | + |
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Preference number: 4 (lower is better) Translates to: SLSLANQGPFLK*LRLSFLGKPLQ Trigger: TTGTAGAGGTTTGCCAAGAAAACTTAACCTCAGCAACTTCAGGAATGGCCCCTGATTTGCGAGGGATAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR CAA 72 bp | AAACAATGGCGCAGCTTTCCCAACTCCATACAGTCTTaGCTCTTTCTTCTTTTCTCTCTGGTTCAGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: KQWRSFPNSIQS*LFLLFSLVQEE Trigger: CTCTTCCTGAACCAGAGAGAAAAGAAGAAAGAGCAAAGACTGTATGGAGTTGGGAAAGCTGCGCCATTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| CDS-3UTR TCA 90 bp | GACTATCATTTAAGTAACATACCCACAAATCGCTTTCTGTACCCTGGTCCCCATAAAGAGGGTTGTTGTTaGGGCTGCTTCTTTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: DYHLSNIPTNRFLYPGPHKEGCC*GCFFGS Trigger: AGATCCAAAGAAGCAGCCTCAACAACAACCCTCTTT...ATGGGGACCAGGGTACAGAAAGCGATTTGTGGGTATGTTACTTAAATGATAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| CDS-3UTR CCA 90 bp | GGAACAAATTCACAGTCAAGCAAAACATTCATTCCTTCTAGGTTAGGTGTGAGACTTCTTTGGATCTGCTaGAAAAAGGAGCTGACGTCC | + |
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Preference number: 4 (lower is better) Translates to: GTNSQSSKTFIPSRLGVRLLWIC*KKELTS Trigger: GGACGTCAGCTCCTTTTTCCAGCAGATCCAAAGAAG...TCTCACACCTAACCTAGAAGGAATGAATGTTTTGCTTGACTGTGAATTTGTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| CDS-3UTR CCA 90 bp | CATACAGTCCAGTACTCATTCCCAGAGTGCAAACACTGCCATAATTTAACACTGGCCAAGTATTTGTACTaGAAAAGAGGGTTGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: HTVQYSFPECKHCHNLTLAKYLY*KRGLLL Trigger: CAACAACAACCCTCTTTTCCAGTACAAATACTTGGC...CAGTGTTAAATTATGGCAGTGTTTGCACTCTGGGAATGAGTACTGGACTGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| 3UTR CAA 72 bp | CATACGCAAACAACCTTAAATCCTGAAAACCCAGGTTaGACTCATTTGGGGCTTGTCATAAACTATCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: HTQTTLNPENPG*THLGLVINYLG Trigger: TCCTAGATAGTTTATGACAAGCCCCAAATGAGTCAAACCTGGGTTTTCAGGATTTAAGGTTGTTTGCGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| CDS CCA 90 bp | GGAGCTGACGTCCCAGCGGTAAAGGACATCCAGCAGCATGATGCTTaGCACCCTCAAGGCCACGTTCAGCACTGCCTCCAGTTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: GADVPAVKDIQQHDA*HPQGHVQHCLQFLL Trigger: AAGGAGAAACTGGAGGCAGTGCTGAACGTGGCCTTGAGGGTGCCAAGCATCATGCTGCTGGATGTCCTTTACCGCTGGGACGTCAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019333.10 ENSMUST00000101327.3 |
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| CDS-3UTR CAA 90 bp | TCAGGTTTAAGAGTCTCAGGCGACACGAGAGCACCCGCAAGGCCTAGTGCACGCCTAGCCGAGCCTCTGTaGATGTGTTCACTACTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SGLRVSGDTRAPARPSARLAEPL*MCSLLS Trigger: GGACAGTAGTGAACACATCAACAGAGGCTCGGCTAG...GCGTGCACTAGGCCTTGCGGGTGCTCTCGTGTCGCCTGAGACTCTTAAACCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR CAA 90 bp | ATTGCAAAATTTCTCCAACAGCATGAAGTGGGGTGGAGAGCGGGTGTGTCCACTTGGAAAAGAGGGTTGTaGTTGAGGCTGCTTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: IAKFLQQHEVGWRAGVSTWKRGL*LRLLLW Trigger: CCAAAGAAGCAGCCTCAACAACAACCCTCTTTTCCA...AGTGGACACACCCGCTCTCCACCCCACTTCATGCTGTTGGAGAAATTTTGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR CAA 90 bp | ATTGCAAAATTTCTCCAACAGCATGAAGTGGGGTGGAGAGCGGGTGTGTCCACTTACTGGAAAAGAGGGTaGTTGTTGAGGCTGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: IAKFLQQHEVGWRAGVSTYWKRG*LLRLLL Trigger: AAGAAGCAGCCTCAACAACAACCCTCTTTTCCAGTA...AGTGGACACACCCGCTCTCCACCCCACTTCATGCTGTTGGAGAAATTTTGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR CAA 90 bp | ATTAACAGCTTCAAAAGTGGTGTTTGCAGAGTGGGGTCATACAGTCCAGTACTCAGCACTCGGCGATGCTaGTCAGGAAAAGGAAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: INSFKSGVCRVGSYSPVLSTRRC*SGKGRE Trigger: TTCTCTTCCTTTTCCTGACAAGCATCGCCGAGTGCT...GAGTACTGGACTGTATGACCCCACTCTGCAAACACCACTTTTGAAGCTGTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR CAA 90 bp | CAGGGGCCATTCCTGAAGTTGCTGAGGTTAAGTTTTCTTGGCAAACCTCTACAAAAAAGAGGGTTGTTGTaGAGGCTGCTTCTTTGGATC | + |
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Preference number: 5 (lower is better) Translates to: QGPFLKLLRLSFLGKPLQKRGLL*RLLLWI Trigger: GATCCAAAGAAGCAGCCTCAACAACAACCCTCTTTT...TTGTAGAGGTTTGCCAAGAAAACTTAACCTCAGCAACTTCAGGAATGGCCCCTG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS-3UTR CAA 90 bp | GGAACAAATTCACAGTCAAGCAAAACATTCATTCCTTCTAGGTTAGGTGTGAGATGGAAAAGAGGGTTGTaGTTGAGGCTGCTTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: GTNSQSSKTFIPSRLGVRWKRGL*LRLLLW Trigger: CCAAAGAAGCAGCCTCAACAACAACCCTCTTTTCCA...TCTCACACCTAACCTAGAAGGAATGAATGTTTTGCTTGACTGTGAATTTGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| CDS-3UTR CAA 90 bp | TTCAAAGTCAATCTCAGTGGAAATGACAAATGTCGACCCTATCTAAGCTCACAAAAAAGAGGGTTGTTGTaGAGGCTGCTTCTTTGGATC | + |
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Preference number: 5 (lower is better) Translates to: FKVNLSGNDKCRPYLSSQKRGLL*RLLLWI Trigger: GATCCAAAGAAGCAGCCTCAACAACAACCCTCTTTT...TTGTGAGCTTAGATAGGGTCGACATTTGTCATTTCCACTGAGATTGACTTTGAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000101327.3 |
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| CDS TCA 72 bp | GGTGGACTCTCATGGTCCGGGGGTTCAGGACCTTCCTaGAGTACAATGTTCTGCTCGGCCCCCGCAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GGLSWSGGSGPS*STMFCSAPAGG Trigger: GCCTCCTGCGGGGGCCGAGCAGAACATTGTACTTCAGGAAGGTCCTGAACCCCCGGACCATGAGAGTCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019333.10 |
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| CDS CCA 72 bp | GTCCCAGCGGTAAAGGACATCCAGCAGCATGATGCTTaGCACCCTCAAGGCCACGTTCAGCACTGCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VPAVKDIQQHDA*HPQGHVQHCLQ Trigger: CTGGAGGCAGTGCTGAACGTGGCCTTGAGGGTGCCAAGCATCATGCTGCTGGATGTCCTTTACCGCTGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019333.10 ENSMUST00000101327.3 |
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| CDS CAA 90 bp | CAAGTATTTGTACTGGAAAAGAGGGTTGTTGTTGAGGCTGCTTCTTaGGATCTGCTGGAAAAAGGAGCTGACGTCCCAGCGGTAAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: QVFVLEKRVVVEAAS*DLLEKGADVPAVKD Trigger: GTCCTTTACCGCTGGGACGTCAGCTCCTTTTTCCAGCAGATCCAAAGAAGCAGCCTCAACAACAACCCTCTTTTCCAGTACAAATACTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019333.10 ENSMUST00000101327.3 |
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| CDS CAA 90 bp | TGCATATTAAGAGCCAAGTATTTGTACTGGAAAAGAGGGTTGTTGTaGAGGCTGCTTCTTTGGATCTGCTGGAAAAAGGAGCTGACGTCC | + |
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Preference number: 6 (lower is better) Translates to: CILRAKYLYWKRGLL*RLLLWICWKKELTS Trigger: GGACGTCAGCTCCTTTTTCCAGCAGATCCAAAGAAGCAGCCTCAACAACAACCCTCTTTTCCAGTACAAATACTTGGCTCTTAATATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019333.10 ENSMUST00000101327.3 |
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