Pregenerated sensors for RNF144B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038068Ensembl transcript IDs: ENSMUST00000068891.12, ENSMUST00000110111.4
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCTTCCTGGGAAGGGACAACTCCCTCTGAACGGCAGTTTCTCCTaGCTGGAGATGAGATCACACGGGGAGAGAGCTGCTATGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: PLPGKGQLPLNGSFS*LEMRSHGERAAMFL Trigger: CAGAAACATAGCAGCTCTCTCCCCGTGTGATCTCATCTCCAGGCAGGAGAAACTGCCGTTCAGAGGGAGTTGTCCCTTCCCAGGAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR GCA 90 bp | ACAGGCACACTCATGCCCCGGTGCGTGGCCTTTTCCAACACCGAATaGTTTCAGGTAGGTTCAAAGTCTGGGCAGAGGCACTTCCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: TGTLMPRCVAFSNTE*FQVGSKSGQRHFQS Trigger: ACTTTGGAAGTGCCTCTGCCCAGACTTTGAACCTACCTGAAAGCATTCGGTGTTGGAAAAGGCCACGCACCGGGGCATGAGTGTGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR GCA 90 bp | GGCCTCTGCCATGTGTCTTGTGGCAGTGGAACCAACACAGACGTTTaGTCAGTTTGCAATGCTGCCAAGTGCGGCAATACCGCCATGACT | + |
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Preference number: 1 (lower is better) Translates to: GLCHVSCGSGTNTDV*SVCNAAKCGNTAMT Trigger: AGTCATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTTCCACTGCCACAAGACACATGGCAGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR GCA 90 bp | AGTGGAACCAACACAGACGTTTGCTCAGTTTGCAATGCTGCCAAGTaGGGCAATACCGCCATGACTACAGTGAGTATTCACCCAGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: SGTNTDVCSVCNAAK*GNTAMTTVSIHPGS Trigger: GGAGCCTGGGTGAATACTCACTGTAGTCATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTTCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR GCA 90 bp | ACGTGTTATTATGCAGTATCATCCTTCCCTCCGGCTCTGGGCCTCTaGCATGTGTCTTGTGGCAGTGGAACCAACACAGACGTTTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: TCYYAVSSFPPALGL*HVSCGSGTNTDVCS Trigger: TGAGCAAACGTCTGTGTTGGTTCCACTGCCACAAGACACATGGCAGAGGCCCAGAGCCGGAGGGAAGGATGATACTGCATAATAACACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR GCA 90 bp | GAAGGCGATTTCCCTCAGTTTCGCCGGGGAAATCGCCCAGGCATTTaGCTCCGTCTTTACTCTAAATCCACTCACAGCAGCTTCTACTTC | + |
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Preference number: 1 (lower is better) Translates to: EGDFPQFRRGNRPGI*LRLYSKSTHSSFYF Trigger: GAAGTAGAAGCTGCTGTGAGTGGATTTAGAGTAAAGACGGAGGCAAATGCCTGGGCGATTTCCCCGGCGAAACTGAGGGAAATCGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR GCA 90 bp | TTGTGGCAGTGGAACCAACACAGACGTTTGCTCAGTTTGCAATGCTaGCAAGTGCGGCAATACCGCCATGACTACAGTGAGTATTCACCC | + |
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Preference number: 1 (lower is better) Translates to: LWQWNQHRRLLSLQC*QVRQYRHDYSEYSP Trigger: GGGTGAATACTCACTGTAGTCATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTTCCACTGCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR CCA 90 bp | AATACCGCCATGACTACAGTGAGTATTCACCCAGGCTCCTTGGTTTaGATGGAAGATGAGCAGCCTGGTGGGATCCTTTGGAGGGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: NTAMTTVSIHPGSLV*MEDEQPGGILWRVR Trigger: TCTTACCCTCCAAAGGATCCCACCAGGCTGCTCATCTTCCATCCAAACCAAGGAGCCTGGGTGAATACTCACTGTAGTCATGGCGGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR TCA 90 bp | ATGGAAGATGAGCAGCCTGGTGGGATCCTTTGGAGGGTAAGATGGTaGTGTTTTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGC | + |
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Preference number: 1 (lower is better) Translates to: MEDEQPGGILWRVRW*CFRVSQAKAKFPTC Trigger: GCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAAAACATCACCATCTTACCCTCCAAAGGATCCCACCAGGCTGCTCATCTTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR GCA 90 bp | GTCTTGTGGCAGTGGAACCAACACAGACGTTTGCTCAGTTTGCAATaGTGCCAAGTGCGGCAATACCGCCATGACTACAGTGAGTATTCA | + |
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Preference number: 1 (lower is better) Translates to: VLWQWNQHRRLLSLQ*CQVRQYRHDYSEYS Trigger: TGAATACTCACTGTAGTCATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTTCCACTGCCACAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR CCA 90 bp | GTGTCTACTGTTGATGCACACTGTCTGGTCCAACTCCTGATCTGTTaGGAATATGACCACAGAGCCCAAGAAAGGACCCTGCTGTCTACA | + |
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Preference number: 1 (lower is better) Translates to: VSTVDAHCLVQLLIC*EYDHRAQERTLLST Trigger: TGTAGACAGCAGGGTCCTTTCTTGGGCTCTGTGGTCATATTCCCAACAGATCAGGAGTTGGACCAGACAGTGTGCATCAACAGTAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR TCA 90 bp | CCTGAATATATACATGCCCACTTAGGATACATTCCACCGCACATGTaGTCCCCTGAATACATACATGCCCACTTAGGATACATTCCACCG | + |
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Preference number: 1 (lower is better) Translates to: PEYIHAHLGYIPPHM*SPEYIHAHLGYIPP Trigger: CGGTGGAATGTATCCTAAGTGGGCATGTATGTATTCAGGGGATCACATGTGCGGTGGAATGTATCCTAAGTGGGCATGTATATATTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR TCA 90 bp | AGGAGCAGTGGGCGCAGGAGGCGAAAGCAGCACACACTTAGTTATTaGGTCATTTCAAAGAGGAAATTTGGCGTTCCAAGAAACAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: RSSGRRRRKQHTLSY*VISKRKFGVPRNSF Trigger: AAAACTGTTTCTTGGAACGCCAAATTTCCTCTTTGAAATGACTCAATAACTAAGTGTGTGCTGCTTTCGCCTCCTGCGCCCACTGCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR CCA 90 bp | AGATTTCAAGTCCAGAACAAATACCCACACTGTGAACAAACAGGGTaGCTAAGACGCTATCTAACATTTGCTTTCATAATGGCTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: RFQVQNKYPHCEQTG*LRRYLTFAFIMAFF Trigger: GAAGAAAGCCATTATGAAAGCAAATGTTAGATAGCGTCTTAGCCACCCTGTTTGTTCACAGTGTGGGTATTTGTTCTGGACTTGAAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR TCA 90 bp | ACTTTCAAAGTACAGATTTCAAGTCCAGAACAAATACCCACACTGTaGACAAACAGGGTGGCTAAGACGCTATCTAACATTTGCTTTCAT | + |
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Preference number: 1 (lower is better) Translates to: TFKVQISSPEQIPTL*TNRVAKTLSNICFH Trigger: ATGAAAGCAAATGTTAGATAGCGTCTTAGCCACCCTGTTTGTTCACAGTGTGGGTATTTGTTCTGGACTTGAAATCTGTACTTTGAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR TCA 90 bp | TCACCAGAAGACGGAGCCACTTTATATGGAAGATTTTCTAATAAATaGTTGAAAGGATTTGGGCTGGTTGCCATTCAGAAGTTTTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: SPEDGATLYGRFSNK*LKGFGLVAIQKFSR Trigger: TCTAGAAAACTTCTGAATGGCAACCAGCCCAAATCCTTTCAATCATTTATTAGAAAATCTTCCATATAAAGTGGCTCCGTCTTCTGGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR TCA 90 bp | ATGAAATACCCTTTCAAAAGAGAGGTTTGTTTTTCCTGCTGTAACTaGAGACATTCACCAGAAGACGGAGCCACTTTATATGGAAGATTT | + |
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Preference number: 1 (lower is better) Translates to: MKYPFKREVCFSCCN*RHSPEDGATLYGRF Trigger: AAATCTTCCATATAAAGTGGCTCCGTCTTCTGGTGAATGTCTTCAGTTACAGCAGGAAAAACAAACCTCTCTTTTGAAAGGGTATTTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGTGGGTTGTTACACCCAGGTGTGAACCTGGTGGGCTTTGTCACAGCCAACCTTCCCTCCGGCTCTaGGCCTCTGCCATGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: GRWVVTPRCEPGGLCHSQPSLRL*ASAMCL Trigger: AAGACACATGGCAGAGGCCCAGAGCCGGAGGGAAGG...TTGGCTGTGACAAAGCCCACCAGGTTCACACCTGGGTGTAACAACCCACCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGACAACTCCCTCTGAACGGCAGTTTCTCCTGCCTGGAGATGAGATCACACCTTCCCTCCGGCTCTaGGCCTCTGCCATGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: EGTTPSERQFLLPGDEITPSLRL*ASAMCL Trigger: AAGACACATGGCAGAGGCCCAGAGCCGGAGGGAAGG...TGTGATCTCATCTCCAGGCAGGAGAAACTGCCGTTCAGAGGGAGTTGTCCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTGGGCTTTGTCACAGCCAAACGCTTGCTATAGGAACCCTTCCTGAAGCATCTCCTGCCTGGAGATaGGATCACACGGGGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PGGLCHSQTLAIGTLPEASPAWR*DHTGRE Trigger: CTCTCTCCCCGTGTGATCTCATCTCCAGGCAGGAGA...TGCTTCAGGAAGGGTTCCTATAGCAAGCGTTTGGCTGTGACAAAGCCCACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR TCA 90 bp | AGGTTGTTCAGGAGCAGTGGGCGCAGGAGGCGAAAGCAGCACACACTTAGTTATAGGGACAACTCCCTCTaGACGGCAGTTTCTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: RLFRSSGRRRRKQHTLSYRDNSL*TAVSPA Trigger: GGCAGGAGAAACTGCCGTTCAGAGGGAGTTGTCCCT...ATAACTAAGTGTGTGCTGCTTTCGCCTCCTGCGCCCACTGCTCCTGAACAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR TCA 90 bp | AGGTTGTTCAGGAGCAGTGGGCGCAGGAGGCGAAAGCAGCACACACTTAGTTATCTCAAGGGAGGAAGGTaGCTATGTGTGCAGGTCCGC | + |
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Preference number: 2 (lower is better) Translates to: RLFRSSGRRRRKQHTLSYLKGGR*LCVQVR Trigger: GCGGACCTGCACACATAGTCACCTTCCTCCCTTGAG...ATAACTAAGTGTGTGCTGCTTTCGCCTCCTGCGCCCACTGCTCCTGAACAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR CCA 90 bp | CCGGCTCTGGGCCTCTGCCATGTGTCTTGTGGCAGTGGAACCAACACAGACGTTGGTAGGTTCAAAGTCTaGGCAGAGGCACTTCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: PALGLCHVSCGSGTNTDVGRFKV*AEALPK Trigger: CTTTGGAAGTGCCTCTGCCCAGACTTTGAACCTACC...AACGTCTGTGTTGGTTCCACTGCCACAAGACACATGGCAGAGGCCCAGAGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR GCA 90 bp | CGCCCTGCGATGAGCCAGAGCTACAGACACTTGGGTTCCATCTACCAAAGTAGAGCAAAGTTCCCAACCTaGTCCACAGACACAGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: RPAMSQSYRHLGSIYQSRAKFPT*STDTVR Trigger: CCGGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGC...TCTACTTTGGTAGATGGAACCCAAGTGTCTGTAGCTCTGGCTCATCGCAGGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR GCA 90 bp | TTCACCCAGGCTCCTTGGTTTGGATGGAAGATGAGCAGCCTGGTGGGATCCTTTGCAAAGTTCCCAACCTaGTCCACAGACACAGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: FTQAPWFGWKMSSLVGSFAKFPT*STDTVR Trigger: CCGGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGC...AAAGGATCCCACCAGGCTGCTCATCTTCCATCCAAACCAAGGAGCCTGGGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR CAA 90 bp | GTTCTAAGAGGAGAACCCCAGCGGCAGGCTCTGGAAGCTGTACCTTaGCATCCAGTGAGATTTCTGGAAGGTGGGTTGTTACACCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: VLRGEPQRQALEAVP*HPVRFLEGGLLHPG Trigger: ACCTGGGTGTAACAACCCACCTTCCAGAAATCTCACTGGATGCAAAGGTACAGCTTCCAGAGCCTGCCGCTGGGGTTCTCCTCTTAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR CAA 90 bp | CCATGTGTCTTGTGGCAGTGGAACCAACACAGACGTTTGCTCAGTTaGCAATGCTGCCAAGTGCGGCAATACCGCCATGACTACAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PCVLWQWNQHRRLLS*QCCQVRQYRHDYSE Trigger: CTCACTGTAGTCATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTTCCACTGCCACAAGACACATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGTCCTGTGGGGCTGCTTCTTaGTACACAGGCACACTCATG | + |
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Preference number: 2 (lower is better) Translates to: LESPRLKQSSQPAPQTQSCGAAS*YTGTLM Trigger: CATGAGTGTGCCTGTGTATCAAGAAGCAGCCCCACA...GGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR TCA 90 bp | CCACTTAGGGATACATTGCACTGCAGAGGCAAGGCTGATGATAACAGGTCTTTGTCTCCTGCCTGGAGATaGGATCACACGGGGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PLRDTLHCRGKADDNRSLSPAWR*DHTGRE Trigger: CTCTCTCCCCGTGTGATCTCATCTCCAGGCAGGAGA...CAAAGACCTGTTATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCTAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGTGGGTTGTTACACCCAGGTGTGAACCTGGTGGGCTTTGTCACAGCCAAGCAACTGAAGACACCTaGACTGTTTCCATCCGATTG | + |
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Preference number: 2 (lower is better) Translates to: GRWVVTPRCEPGGLCHSQATEDT*TVSIRL Trigger: CAATCGGATGGAAACAGTTCAGGTGTCTTCAGTTGC...TTGGCTGTGACAAAGCCCACCAGGTTCACACCTGGGTGTAACAACCCACCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR CCA 90 bp | CGCCCTGCGATGAGCCAGAGCTACAGACACTTGGGTTCCATCTACCAAAGTAGAGGCAAGGCTGCTAAGTaGGGCTTTTACCAATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: RPAMSQSYRHLGSIYQSRGKAAK*GFYQCA Trigger: AGCACATTGGTAAAAGCCCCACTTAGCAGCCTTGCC...TCTACTTTGGTAGATGGAACCCAAGTGTCTGTAGCTCTGGCTCATCGCAGGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR CCA 90 bp | TTCACCCAGGCTCCTTGGTTTGGATGGAAGATGAGCAGCCTGGTGGGATCCTTTGGTAGGTTCAAAGTCTaGGCAGAGGCACTTCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: FTQAPWFGWKMSSLVGSFGRFKV*AEALPK Trigger: CTTTGGAAGTGCCTCTGCCCAGACTTTGAACCTACC...AAAGGATCCCACCAGGCTGCTCATCTTCCATCCAAACCAAGGAGCCTGGGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR CCA 90 bp | AACACAGACGTTTGCTCAGTTTGCAATGCTGCCAAGTGCGGCAATACCGCCATGGCTCCTTGGTTTGGATaGAAGATGAGCAGCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: NTDVCSVCNAAKCGNTAMAPWFG*KMSSLV Trigger: CACCAGGCTGCTCATCTTCCATCCAAACCAAGGAGC...CATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGACAACTCCCTCTGAACGGCAGTTTCTCCTGCCTGGAGATGAGATCACACTGCCATGTGTCTTGTaGCAGTGGAACCAACACAGA | + |
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Preference number: 2 (lower is better) Translates to: EGTTPSERQFLLPGDEITLPCVL*QWNQHR Trigger: TCTGTGTTGGTTCCACTGCCACAAGACACATGGCAG...TGTGATCTCATCTCCAGGCAGGAGAAACTGCCGTTCAGAGGGAGTTGTCCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAGATGAGATCACACGGGGAGAGAGCTGCTATGTTTCTGCCAAGTCACTGTGGAGGGTAAGATGGTaGTGTTTTAGAGTCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PGDEITRGESCYVSAKSLWRVRW*CFRVSQ Trigger: CTGGGAGACTCTAAAACATCACCATCTTACCCTCCA...CAGTGACTTGGCAGAAACATAGCAGCTCTCTCCCCGTGTGATCTCATCTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR TCA 90 bp | CAGCGGCAGGCTCTGGAAGCTGTACCTTTGCATCCAGTGAGATTTCTGGAAGGTGCACATGTGATCCCCTaGATACATACATGCCCACTT | + |
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Preference number: 2 (lower is better) Translates to: QRQALEAVPLHPVRFLEGAHVIP*IHTCPL Trigger: AAGTGGGCATGTATGTATTCAGGGGATCACATGTGC...ACCTTCCAGAAATCTCACTGGATGCAAAGGTACAGCTTCCAGAGCCTGCCGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR GCA 90 bp | CCTGGTGGGCTTTGTCACAGCCAAACGCTTGCTATAGGAACCCTTCCTGAAGCAACCAACACAGACGTTTaGTCAGTTTGCAATGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PGGLCHSQTLAIGTLPEATNTDV*SVCNAA Trigger: GGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGT...TGCTTCAGGAAGGGTTCCTATAGCAAGCGTTTGGCTGTGACAAAGCCCACCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGTGGGTTGTTACACCCAGGTGTGAACCTGGTGGGCTTTGTCACAGCCAAAAATATCTACACATGTaGCCAGCTGGAGTCACATGG | + |
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Preference number: 2 (lower is better) Translates to: GRWVVTPRCEPGGLCHSQKYLHM*PAGVTW Trigger: CCATGTGACTCCAGCTGGGCACATGTGTAGATATTT...TTGGCTGTGACAAAGCCCACCAGGTTCACACCTGGGTGTAACAACCCACCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR CCA 90 bp | TTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGTCCGGCAAGGCTGCTAAGTaGGGCTTTTACCAATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LESPRLKQSSQPAPQTQSGKAAK*GFYQCA Trigger: AGCACATTGGTAAAAGCCCCACTTAGCAGCCTTGCC...GGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR TCA 90 bp | CCACTTAGGGATACATTGCACTGCAGAGGCAAGGCTGATGATAACAGGTCTTTGTGTGGGGCTGCTTCTTaGTACACAGGCACACTCATG | + |
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Preference number: 2 (lower is better) Translates to: PLRDTLHCRGKADDNRSLCGAAS*YTGTLM Trigger: CATGAGTGTGCCTGTGTATCAAGAAGCAGCCCCACA...CAAAGACCTGTTATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCTAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR TCA 90 bp | AACACAGACGTTTGCTCAGTTTGCAATGCTGCCAAGTGCGGCAATACCGCCATGTGGAGGGTAAGATGGTaGTGTTTTAGAGTCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: NTDVCSVCNAAKCGNTAMWRVRW*CFRVSQ Trigger: CTGGGAGACTCTAAAACATCACCATCTTACCCTCCA...CATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR GCA 90 bp | ATTTCAGGTTACATGAAATCGGCCCCACTTAGAACCAGGCAGGCCTGGAAAATTTGCAATGCTGCCAAGTaGGGCAATACCGCCATGACT | + |
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Preference number: 2 (lower is better) Translates to: ISGYMKSAPLRTRQAWKICNAAK*GNTAMT Trigger: AGTCATGGCGGTATTGCCGCACTTGGCAGCATTGCA...AATTTTCCAGGCCTGCCTGGTTCTAAGTGGGGCCGATTTCATGTAACCTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR GCA 90 bp | TTTCAAGTCCAGAACAAATACCCACACTGTGAACAAACAGGGTGGCTAAGACGCGACGTTTGCTCAGTTTaGAATGCTGCCAAGTGCGGC | + |
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Preference number: 2 (lower is better) Translates to: FQVQNKYPHCEQTGWLRRDVCSV*NAAKCG Trigger: GCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTC...GCGTCTTAGCCACCCTGTTTGTTCACAGTGTGGGTATTTGTTCTGGACTTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAGATGAGATCACACGGGGAGAGAGCTGCTATGTTTCTGCCAAGTCACTGCAGAACGTGTTATTATaGAGTATCATCCTTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PGDEITRGESCYVSAKSLQNVLL*SIILPS Trigger: GGAGGGAAGGATGATACTGCATAATAACACGTTCTG...CAGTGACTTGGCAGAAACATAGCAGCTCTCTCCCCGTGTGATCTCATCTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| 3UTR-3UTR TCA 90 bp | CCACTTAGGGATACATTGCACTGCAGAGGCAAGGCTGATGATAACAGGTCTTTGACAACAGACACTGAATaGGGCCATGTTGCCTTACAA | + |
|
Preference number: 2 (lower is better) Translates to: PLRDTLHCRGKADDNRSLTTDTE*GHVALQ Trigger: TTGTAAGGCAACATGGCCTCATTCAGTGTCTGTTGT...CAAAGACCTGTTATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCTAAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR-3UTR TCA 90 bp | CCACTTAGGGATACATTGCACTGCAGAGGCAAGGCTGATGATAACAGGTCTTTGACAAATCCCAGCAACTaGAGACACCTGAACTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PLRDTLHCRGKADDNRSLTNPSN*RHLNCF Trigger: GAAACAGTTCAGGTGTCTTCAGTTGCTGGGATTTGT...CAAAGACCTGTTATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCTAAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CAA 90 bp | AGAAGAATAACATCTGCCAAACAACAGACACTGAATGAGGCCATGTaGCCTTACAAGTTACAACCTCTTCCTGGGAAGGGACAACTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: RRITSAKQQTLNEAM*PYKLQPLPGKGQLP Trigger: AGGGAGTTGTCCCTTCCCAGGAAGAGGTTGTAACTTGTAAGGCAACATGGCCTCATTCAGTGTCTGTTGTTTGGCAGATGTTATTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR-3UTR TCA 90 bp | CTATGTGTGCAGGTCCGCCACTCAGATGTCATTTATATTCAGACTAATATGAAAGGTTTGGATGGAAGATaGGCAGCCTGGTGGGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: LCVQVRHSDVIYIQTNMKGLDGR*AAWWDP Trigger: AGGATCCCACCAGGCTGCTCATCTTCCATCCAAACC...TTTCATATTAGTCTGAATATAAATGACATCTGAGTGGCGGACCTGCACACATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR TCA 90 bp | TTTCAAGTCCAGAACAAATACCCACACTGTGAACAAACAGGGTGGCTAAGACGCTACCAAAGTAGATTCTaGCACACTCTCTCACACACA | + |
|
Preference number: 2 (lower is better) Translates to: FQVQNKYPHCEQTGWLRRYQSRF*HTLSHT Trigger: TGTGTGTGAGAGAGTGTGTCAGAATCTACTTTGGTA...GCGTCTTAGCCACCCTGTTTGTTCACAGTGTGGGTATTTGTTCTGGACTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR GCA 90 bp | CCACTTAGGGATACATTGCACTGCAGAGGCAAGGCTGATGATAACAGGTCTTTGTTTTCCAACACCGAATaGTTTCAGGTAGGTTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PLRDTLHCRGKADDNRSLFSNTE*FQVGSK Trigger: CTTTGAACCTACCTGAAAGCATTCGGTGTTGGAAAA...CAAAGACCTGTTATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCTAAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR-3UTR GCA 90 bp | GCAGGAGGCGAAAGCAGCACACACTTAGTTATTGAGTCATTTCAAAGAGGAAATAAGCAGCGGCTCCACTaGTCACAGAACGTGTTATTA | + |
|
Preference number: 2 (lower is better) Translates to: AGGESSTHLVIESFQRGNKQRLH*SQNVLL Trigger: TAATAACACGTTCTGTGAGCAGTGGAGCCGCTGCTT...ATTTCCTCTTTGAAATGACTCAATAACTAAGTGTGTGCTGCTTTCGCCTCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR CCA 90 bp | CCACTTAGGGATACATTGCACTGCAGAGGCAAGGCTGATGATAACAGGTCTTTGAGGTCTCTGTTAACGTaGAACACACACAGTTCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: PLRDTLHCRGKADDNRSLRSLLT*NTHSSY Trigger: ATAAGAACTGTGTGTGTTCCACGTTAACAGAGACCT...CAAAGACCTGTTATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCTAAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR-3UTR TCA 90 bp | GACAACAAGAAAATCCAAGCCGACTTATTTGCTTTCCAAAGGCCACTTTCAAAGGATCTGTTGGGAATATaGCCACAGAGCCCAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: DNKKIQADLFAFQRPLSKDLLGI*PQSPRK Trigger: CTTTCTTGGGCTCTGTGGTCATATTCCCAACAGATC...CTTTGAAAGTGGCCTTTGGAAAGCAAATAAGTCGGCTTGGATTTTCTTGTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGAGGCGAAAGCAGCACACACTTAGTTATTGAGTCATTTCAAAGAGGAAATGCATTTCAGGTTACATaGAATCGGCCCCACTTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: AGGESSTHLVIESFQRGNAFQVT*NRPHLE Trigger: TTCTAAGTGGGGCCGATTTCATGTAACCTGAAATGC...ATTTCCTCTTTGAAATGACTCAATAACTAAGTGTGTGCTGCTTTCGCCTCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR GCA 90 bp | ATTTCAGGTTACATGAAATCGGCCCCACTTAGAACCAGGCAGGCCTGGAAAATTTTTTCCAACACCGAATaGTTTCAGGTAGGTTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: ISGYMKSAPLRTRQAWKIFSNTE*FQVGSK Trigger: CTTTGAACCTACCTGAAAGCATTCGGTGTTGGAAAA...AATTTTCCAGGCCTGCCTGGTTCTAAGTGGGGCCGATTTCATGTAACCTGAAAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR TCA 90 bp | GACAACAAGAAAATCCAAGCCGACTTATTTGCTTTCCAAAGGCCACTTTCAAAGACAACAGACACTGAATaGGGCCATGTTGCCTTACAA | + |
|
Preference number: 2 (lower is better) Translates to: DNKKIQADLFAFQRPLSKTTDTE*GHVALQ Trigger: TTGTAAGGCAACATGGCCTCATTCAGTGTCTGTTGT...CTTTGAAAGTGGCCTTTGGAAAGCAAATAAGTCGGCTTGGATTTTCTTGTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGAGGCGAAAGCAGCACACACTTAGTTATTGAGTCATTTCAAAGAGGAAATTTTTCCTGCTGTAACTaGAGACATTCACCAGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: AGGESSTHLVIESFQRGNFSCCN*RHSPED Trigger: GTCTTCTGGTGAATGTCTTCAGTTACAGCAGGAAAA...ATTTCCTCTTTGAAATGACTCAATAACTAAGTGTGTGCTGCTTTCGCCTCCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR GCA 90 bp | CTGTACAGACATCAGATGCTAATGTACACATGTGATCCCCTGAATATATACATGACCAACACAGACGTTTaGTCAGTTTGCAATGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LYRHQMLMYTCDPLNIYMTNTDV*SVCNAA Trigger: GGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGT...CATGTATATATTCAGGGGATCACATGTGTACATTAGCATCTGATGTCTGTACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR-3UTR GCA 90 bp | CTATGTGTGCAGGTCCGCCACTCAGATGTCATTTATATTCAGACTAATATGAAAAGGGATACATTGCACTaGAGAGGCAAGGCTGATGAT | + |
|
Preference number: 2 (lower is better) Translates to: LCVQVRHSDVIYIQTNMKRDTLH*RGKADD Trigger: ATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCT...TTTCATATTAGTCTGAATATAAATGACATCTGAGTGGCGGACCTGCACACATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR TCA 90 bp | GACAACAAGAAAATCCAAGCCGACTTATTTGCTTTCCAAAGGCCACTTTCAAAGACACATGTGATCCCCTaGATATATACATGCCCACTT | + |
|
Preference number: 2 (lower is better) Translates to: DNKKIQADLFAFQRPLSKTHVIP*IYTCPL Trigger: AAGTGGGCATGTATATATTCAGGGGATCACATGTGT...CTTTGAAAGTGGCCTTTGGAAAGCAAATAAGTCGGCTTGGATTTTCTTGTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR GCA 90 bp | GACAACAAGAAAATCCAAGCCGACTTATTTGCTTTCCAAAGGCCACTTTCAAAGCAGAACGTGTTATTATaGAGTATCATCCTTCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: DNKKIQADLFAFQRPLSKQNVLL*SIILPS Trigger: GGAGGGAAGGATGATACTGCATAATAACACGTTCTG...CTTTGAAAGTGGCCTTTGGAAAGCAAATAAGTCGGCTTGGATTTTCTTGTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGAGGCGAAAGCAGCACACACTTAGTTATTGAGTCATTTCAAAGAGGAAATCTCTATATGTGTGAATaGACTACAGTGTCTACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: AGGESSTHLVIESFQRGNLYMCE*TTVSTV Trigger: AACAGTAGACACTGTAGTCCATTCACACATATAGAG...ATTTCCTCTTTGAAATGACTCAATAACTAAGTGTGTGCTGCTTTCGCCTCCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR CCA 90 bp | CAACAAGAAAATCCAAGCCGACTTATTTGCTTTCCAAAGGCCACTTTCAAAGTAAGAGCTACAGACACTTaGGTTCCATCTACCAAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: QQENPSRLICFPKATFKVRATDT*VPSTKV Trigger: TACTTTGGTAGATGGAACCCAAGTGTCTGTAGCTCT...TACTTTGAAAGTGGCCTTTGGAAAGCAAATAAGTCGGCTTGGATTTTCTTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR TCA 90 bp | CTGTACAGACATCAGATGCTAATGTACACATGTGATCCCCTGAATATATACATGGCTCTACATTGTGTCTaGAAGTATGTAAATAACCTG | + |
|
Preference number: 2 (lower is better) Translates to: LYRHQMLMYTCDPLNIYMALHCV*KYVNNL Trigger: CAGGTTATTTACATACTTTCAGACACAATGTAGAGC...CATGTATATATTCAGGGGATCACATGTGTACATTAGCATCTGATGTCTGTACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | GGGAAGGGACAACTCCCTCTGAACGGCAGTTTCTCCTaGCTGGAGATGAGATCACACGGGGAGAGAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GKGQLPLNGSFS*LEMRSHGERAA Trigger: AGCAGCTCTCTCCCCGTGTGATCTCATCTCCAGGCAGGAGAAACTGCCGTTCAGAGGGAGTTGTCCCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | CTCATGCCCCGGTGCGTGGCCTTTTCCAACACCGAATaGTTTCAGGTAGGTTCAAAGTCTGGGCAGAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LMPRCVAFSNTE*FQVGSKSGQRH Trigger: GTGCCTCTGCCCAGACTTTGAACCTACCTGAAAGCATTCGGTGTTGGAAAAGGCCACGCACCGGGGCATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CCA 72 bp | CTTCCCTCCGGCTCTGGGCCTCTGCCATGTGTCTTGTaGCAGTGGAACCAACACAGACGTTTGCTCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LPSGSGPLPCVL*QWNQHRRLLSL Trigger: CAAACTGAGCAAACGTCTGTGTTGGTTCCACTGCCACAAGACACATGGCAGAGGCCCAGAGCCGGAGGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR TCA 72 bp | GCTGTGACAAATGCCCCTCGCCTCAAGGGAGGAAGGTaGCTATGTGTGCAGGTCCGCCACTCAGATGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: AVTNAPRLKGGR*LCVQVRHSDVI Trigger: AATGACATCTGAGTGGCGGACCTGCACACATAGTCACCTTCCTCCCTTGAGGCGAGGGGCATTTGTCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR GCA 72 bp | TATGCAGTATCATCCTTCCCTCCGGCTCTGGGCCTCTaGCATGTGTCTTGTGGCAGTGGAACCAACACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: YAVSSFPPALGL*HVSCGSGTNTD Trigger: GTCTGTGTTGGTTCCACTGCCACAAGACACATGGCAGAGGCCCAGAGCCGGAGGGAAGGATGATACTGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | AAGCAGCGGCTCCACTGCTCACAGAACGTGTTATTATaGAGTATCATCCTTCCCTCCGGCTCTGGGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KQRLHCSQNVLL*SIILPSGSGPL Trigger: CAGAGGCCCAGAGCCGGAGGGAAGGATGATACTGCATAATAACACGTTCTGTGAGCAGTGGAGCCGCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CCA 72 bp | TCCGGCTCTGGGCCTCTGCCATGTGTCTTGTGGCAGTaGAACCAACACAGACGTTTGCTCAGTTTGCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: SGSGPLPCVLWQ*NQHRRLLSLQC Trigger: GCATTGCAAACTGAGCAAACGTCTGTGTTGGTTCCACTGCCACAAGACACATGGCAGAGGCCCAGAGCCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | TTTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTaGTCCACAGACACAGTCCGGACTGTGGGGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FRVSQAKAKFPT*STDTVRTVGLL Trigger: AAGCAGCCCCACAGTCCGGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | CAGTTGAGCTCCTGTAATCCCCTGAGCTGTGACAAATaGCCCTCGCCTCAAGGGAGGAAGGTGACTATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QLSSCNPLSCDK*PSPQGRKVTMC Trigger: ACACATAGTCACCTTCCTCCCTTGAGGCGAGGGGCATTTGTCACAGCTCAGGGGATTACAGGAGCTCAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR GCA 72 bp | TTCCCTCAGTTTCGCCGGGGAAATCGCCCAGGCATTTaGCTCCGTCTTTACTCTAAATCCACTCACAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FPQFRRGNRPGI*LRLYSKSTHSS Trigger: GCTGCTGTGAGTGGATTTAGAGTAAAGACGGAGGCAAATGCCTGGGCGATTTCCCCGGCGAAACTGAGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTGTTCAGGAGCAGTGGGCGCAGGAGGCGAAAGCAGCACACACTTAGTTATCTGTGGGGCTGCTTCTaGATACACAGGCACACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RLFRSSGRRRRKQHTLSYLWGCF*IHRHTH Trigger: ATGAGTGTGCCTGTGTATCAAGAAGCAGCCCCACAG...ATAACTAAGTGTGTGCTGCTTTCGCCTCCTGCGCCCACTGCTCCTGAACAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTCAGTGTGTCAGCTCCTGAGATAAGCAGCGGCTCCACTGCTCACAGAACGAACCAACACAGACGTTaGCTCAGTTTGCAATGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PVSVSAPEISSGSTAHRTNQHRR*LSLQCC Trigger: GCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTT...CGTTCTGTGAGCAGTGGAGCCGCTGCTTATCTCAGGAGCTGACACACTGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR TCA 72 bp | GAGTATTCACCCAGGCTCCTTGGTTTGGATGGAAGATaGGCAGCCTGGTGGGATCCTTTGGAGGGTAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: EYSPRLLGLDGR*AAWWDPLEGKM Trigger: CATCTTACCCTCCAAAGGATCCCACCAGGCTGCTCATCTTCCATCCAAACCAAGGAGCCTGGGTGAATACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR TCA 72 bp | AAACAAAGTCAGTTGGGCTGGTATTGCGCCCTGCGATaGGCCAGAGCTACAGACACTTGGGTTCCATCTACC | + |
|
Preference number: 3 (lower is better) Translates to: KQSQLGWYCALR*ARATDTWVPST Trigger: GGTAGATGGAACCCAAGTGTCTGTAGCTCTGGCTCATCGCAGGGCGCAATACCAGCCCAACTGACTTTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR GCA 72 bp | TGTGGCAGTGGAACCAACACAGACGTTTGCTCAGTTTaGAATGCTGCCAAGTGCGGCAATACCGCCATGACT | + |
|
Preference number: 3 (lower is better) Translates to: CGSGTNTDVCSV*NAAKCGNTAMT Trigger: AGTCATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTTCCACTGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | ATGTTTCTGCCAAGTCACTGTGGAAACGCTAAGAAGTaGACACGCGGTAGCCAGCATAGGCATGCCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: MFLPSHCGNAKK*TRGSQHRHASQ Trigger: CTGACTGGCATGCCTATGCTGGCTACCGCGTGTGCACTTCTTAGCGTTTCCACAGTGACTTGGCAGAAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGTCCCTGTGGGGCTGCTTCTaGATACACAGGCACACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LESPRLKQSSQPAPQTQSLWGCF*IHRHTH Trigger: ATGAGTGTGCCTGTGTATCAAGAAGCAGCCCCACAG...GGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGTGGGTTGTTACACCCAGGTGTGAACCTGGTGGGCTTTGTCACAGCCAACGCACATGTGATCCCTaGCATATAGACATCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: GRWVVTPRCEPGGLCHSQRTCDP*HIDIST Trigger: AGTGGAGATGTCTATATGCAAGGGATCACATGTGCG...TTGGCTGTGACAAAGCCCACCAGGTTCACACCTGGGTGTAACAACCCACCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR TCA 72 bp | ACACTGTCTGGTCCAACTCCTGATCTGTTGGGAATATaGCCACAGAGCCCAAGAAAGGACCCTGCTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TLSGPTPDLLGI*PQSPRKDPAVY Trigger: GTAGACAGCAGGGTCCTTTCTTGGGCTCTGTGGTCATATTCCCAACAGATCAGGAGTTGGACCAGACAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | TGGAACCAACACAGACGTTTGCTCAGTTTGCAATGCTaGCAAGTGCGGCAATACCGCCATGACTACAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: WNQHRRLLSLQC*QVRQYRHDYSE Trigger: CTCACTGTAGTCATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | CAGTGGAACCAACACAGACGTTTGCTCAGTTTGCAATaGTGCCAAGTGCGGCAATACCGCCATGACTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: QWNQHRRLLSLQ*CQVRQYRHDYS Trigger: ACTGTAGTCATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTTCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | CATGTGTCTTGTGGCAGTGGAACCAACACAGACGTTTaGTCAGTTTGCAATGCTGCCAAGTGCGGCAATACC | + |
|
Preference number: 3 (lower is better) Translates to: HVSCGSGTNTDV*SVCNAAKCGNT Trigger: GGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTTCCACTGCCACAAGACACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | ATGCCCCTCGCCTCAAGGGAGGAAGGTGACTATGTGTaGAGGTCCGCCACTCAGATGTCATTTATATTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: MPLASREEGDYV*RSATQMSFIFR Trigger: TCTGAATATAAATGACATCTGAGTGGCGGACCTGCACACATAGTCACCTTCCTCCCTTGAGGCGAGGGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR CCA 72 bp | AAAGTTTGGCAAGGAGAAGGAGGCAAGGCTGCTAAGTaGGGCTTTTACCAATGTGCTGTCTCATGTGACCCG | + |
|
Preference number: 3 (lower is better) Translates to: KVWQGEGGKAAK*GFYQCAVSCDP Trigger: CGGGTCACATGAGACAGCACATTGGTAAAAGCCCCACTTAGCAGCCTTGCCTCCTTCTCCTTGCCAAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CCA 72 bp | ATGACTACAGTGAGTATTCACCCAGGCTCCTTGGTTTaGATGGAAGATGAGCAGCCTGGTGGGATCCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: MTTVSIHPGSLV*MEDEQPGGILW Trigger: CCAAAGGATCCCACCAGGCTGCTCATCTTCCATCCAAACCAAGGAGCCTGGGTGAATACTCACTGTAGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CCA 72 bp | GTTGATGCACACTGTCTGGTCCAACTCCTGATCTGTTaGGAATATGACCACAGAGCCCAAGAAAGGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VDAHCLVQLLIC*EYDHRAQERTL Trigger: CAGGGTCCTTTCTTGGGCTCTGTGGTCATATTCCCAACAGATCAGGAGTTGGACCAGACAGTGTGCATCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR TCA 72 bp | GAGCAGCCTGGTGGGATCCTTTGGAGGGTAAGATGGTaGTGTTTTAGAGTCTCCCAGGCTAAAGCAAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: EQPGGILWRVRW*CFRVSQAKAKF Trigger: GAACTTTGCTTTAGCCTGGGAGACTCTAAAACATCACCATCTTACCCTCCAAAGGATCCCACCAGGCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | GTTGGGAATATGACCACAGAGCCCAAGAAAGGACCCTaGTGTCTACAAGGAAAGCTTTGGAGCTTTCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VGNMTTEPKKGP*CLQGKLWSFPL Trigger: AAGGGGAAAGCTCCAAAGCTTTCCTTGTAGACAGCAGGGTCCTTTCTTGGGCTCTGTGGTCATATTCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CCA 72 bp | GCCCAGCTGGAGTCACATGGGCTCTATATGTGTGAATaGACTACAGTGTCTACTGTTGATGCACACTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AQLESHGLYMCE*TTVSTVDAHCL Trigger: CAGACAGTGTGCATCAACAGTAGACACTGTAGTCCATTCACACATATAGAGCCCATGTGACTCCAGCTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CCA 72 bp | CAGTTGCCACCTTGTATCTTTGTAAACAAAGTCAGTTaGGCTGGTATTGCGCCCTGCGATGAGCCAGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: QLPPCIFVNKVS*AGIAPCDEPEL Trigger: TAGCTCTGGCTCATCGCAGGGCGCAATACCAGCCCAACTGACTTTGTTTACAAAGATACAAGGTGGCAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR CAA 90 bp | CCACTTAGGGATACATTGCACTGCAGAGGCAAGGCTGATGATAACAGGTCTTTGATTCACCCAGGCTCCTaGGTTTGGATGGAAGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: PLRDTLHCRGKADDNRSLIHPGS*VWMEDE Trigger: CTCATCTTCCATCCAAACCAAGGAGCCTGGGTGAAT...CAAAGACCTGTTATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCTAAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR-3UTR CAA 90 bp | CCACTTAGGGATACATTGCACTGCAGAGGCAAGGCTGATGATAACAGGTCTTTGCTACAGTGTCTACTGTaGATGCACACTGTCTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PLRDTLHCRGKADDNRSLLQCLL*MHTVWS Trigger: GGACCAGACAGTGTGCATCAACAGTAGACACTGTAG...CAAAGACCTGTTATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCTAAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTGTTCAGGAGCAGTGGGCGCAGGAGGCGAAAGCAGCACACACTTAGTTATGGCACAGTTGCCACCTaGTATCTTTGTAAACAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RLFRSSGRRRRKQHTLSYGTVAT*YLCKQS Trigger: ACTTTGTTTACAAAGATACAAGGTGGCAACTGTGCC...ATAACTAAGTGTGTGCTGCTTTCGCCTCCTGCGCCCACTGCTCCTGAACAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR GCA 72 bp | AACACAGACGTTTGCTCAGTTTGCAATGCTGCCAAGTaGGGCAATACCGCCATGACTACAGTGAGTATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: NTDVCSVCNAAK*GNTAMTTVSIH Trigger: GTGAATACTCACTGTAGTCATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CCA 72 bp | TTCCAACACCGAATGCTTTCAGGTAGGTTCAAAGTCTaGGCAGAGGCACTTCCAAAGTTTGGCAAGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FQHRMLSGRFKV*AEALPKFGKEK Trigger: CTTCTCCTTGCCAAACTTTGGAAGTGCCTCTGCCCAGACTTTGAACCTACCTGAAAGCATTCGGTGTTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CCA 72 bp | CCCAAGAAAGGACCCTGCTGTCTACAAGGAAAGCTTTaGAGCTTTCCCCTTTCATCCCGTAGAAAACGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PKKGPCCLQGKL*SFPLSSRRKRF Trigger: AAAGCGTTTTCTACGGGATGAAAGGGGAAAGCTCCAAAGCTTTCCTTGTAGACAGCAGGGTCCTTTCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR TCA 72 bp | ACTGAGGTGACACAAATCCCAGCAACTGAAGACACCTaGACTGTTTCCATCCGATTGCTTGTTGTCACACGA | + |
|
Preference number: 3 (lower is better) Translates to: TEVTQIPATEDT*TVSIRLLVVTR Trigger: TCGTGTGACAACAAGCAATCGGATGGAAACAGTTCAGGTGTCTTCAGTTGCTGGGATTTGTGTCACCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR GCA 72 bp | ACGTGGAACACACACAGTTCTTATGAAGCACCGGGCTaGTTTGCTAATGGCAACTGTATACTGCTAGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TWNTHSSYEAPG*FANGNCILLEE Trigger: TTCCTCTAGCAGTATACAGTTGCCATTAGCAAAGCAGCCCGGTGCTTCATAAGAACTGTGTGTGTTCCACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCGGCACAGTTGCCACCTTGTATCTTTGTAAACAAAGTCAGTTGGGCTGGTATAAGAGCTGCTCTACATaGTGTCTGAAAGTATGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PGTVATLYLCKQSQLGWYKSCST*CLKVCK Trigger: TTTACATACTTTCAGACACAATGTAGAGCAGCTCTT...ATACCAGCCCAACTGACTTTGTTTACAAAGATACAAGGTGGCAACTGTGCCGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTGAGAGCACAGAAAGTACTCAGATTGTCTGGACAGCTCCTGGGAGACCAAAAGAGCTGCTCTACATaGTGTCTGAAAGTATGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: FLRAQKVLRLSGQLLGDQKSCST*CLKVCK Trigger: TTTACATACTTTCAGACACAATGTAGAGCAGCTCTT...TTGGTCTCCCAGGAGCTGTCCAGACAATCTGAGTACTTTCTGTGCTCTCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGTACAGACATCAGATGCTAATGTACACATGTGATCCCCTGAATATATACATGAACCAACACAGACGTTaGCTCAGTTTGCAATGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LYRHQMLMYTCDPLNIYMNQHRR*LSLQCC Trigger: GCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTT...CATGTATATATTCAGGGGATCACATGTGTACATTAGCATCTGATGTCTGTACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR TCA 72 bp | GTACAGATTTCAAGTCCAGAACAAATACCCACACTGTaGACAAACAGGGTGGCTAAGACGCTATCTAACATT | + |
|
Preference number: 3 (lower is better) Translates to: VQISSPEQIPTL*TNRVAKTLSNI Trigger: AATGTTAGATAGCGTCTTAGCCACCCTGTTTGTTCACAGTGTGGGTATTTGTTCTGGACTTGAAATCTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR CCA 72 bp | GTCCAGAACAAATACCCACACTGTGAACAAACAGGGTaGCTAAGACGCTATCTAACATTTGCTTTCATAATG | + |
|
Preference number: 3 (lower is better) Translates to: VQNKYPHCEQTG*LRRYLTFAFIM Trigger: CATTATGAAAGCAAATGTTAGATAGCGTCTTAGCCACCCTGTTTGTTCACAGTGTGGGTATTTGTTCTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| 3UTR TCA 72 bp | CCTTTCAAAAGAGAGGTTTGTTTTTCCTGCTGTAACTaGAGACATTCACCAGAAGACGGAGCCACTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: PFKREVCFSCCN*RHSPEDGATLY Trigger: ATATAAAGTGGCTCCGTCTTCTGGTGAATGTCTTCAGTTACAGCAGGAAAAACAAACCTCTCTTTTGAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR TCA 90 bp | CGCCCTGCGATGAGCCAGAGCTACAGACACTTGGGTTCCATCTACCAAAGTAGAAAACCGGGCACTGCTTaGTGGGGGCGTCCGCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPAMSQSYRHLGSIYQSRKPGTA*WGRPHP Trigger: CGGATGCGGACGCCCCCATCAAGCAGTGCCCGGTTT...TCTACTTTGGTAGATGGAACCCAAGTGTCTGTAGCTCTGGCTCATCGCAGGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR TCA 90 bp | GAAGGGACAACTCCCTCTGAACGGCAGTTTCTCCTGCCTGGAGATGAGATCACAAAACCGGGCACTGCTTaGTGGGGGCGTCCGCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: EGTTPSERQFLLPGDEITKPGTA*WGRPHP Trigger: CGGATGCGGACGCCCCCATCAAGCAGTGCCCGGTTT...TGTGATCTCATCTCCAGGCAGGAGAAACTGCCGTTCAGAGGGAGTTGTCCCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | CTCCGGCTCTGGGCCTCTGCCATGTGTCTTGTGGCAGTGGAACCAACACAGACGACCGATGCCCTCGAGTaGCCGAGCTTATTCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRLWASAMCLVAVEPTQTTDALE*PSLFLH Trigger: ATGCAGGAATAAGCTCGGCCACTCGAGGGCATCGGT...CGTCTGTGTTGGTTCCACTGCCACAAGACACATGGCAGAGGCCCAGAGCCGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | CCAGTCAGTGTGTCAGCTCCTGAGATAAGCAGCGGCTCCACTGCTCACAGAACGTCCTGCAGGGTCCCGTaGTTTAGGCACACCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVSVSAPEISSGSTAHRTSCRVP*FRHTMS Trigger: TGACATGGTGTGCCTAAACCACGGGACCCTGCAGGA...CGTTCTGTGAGCAGTGGAGCCGCTGCTTATCTCAGGAGCTGACACACTGACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | CCGGCTCTGGGCCTCTGCCATGTGTCTTGTGGCAGTGGAACCAACACAGACGTTATATGGCACACGGTCTaGCAGTCTGCAACAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PALGLCHVSCGSGTNTDVIWHTV*QSATGH Trigger: GTGTCCTGTTGCAGACTGCCAGACCGTGTGCCATAT...AACGTCTGTGTTGGTTCCACTGCCACAAGACACATGGCAGAGGCCCAGAGCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR GCA 90 bp | TTCACCCAGGCTCCTTGGTTTGGATGGAAGATGAGCAGCCTGGTGGGATCCTTTCACGGTCTGGCAGTCTaGAACAGGACACCATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FTQAPWFGWKMSSLVGSFHGLAV*NRTPCP Trigger: CGGACATGGTGTCCTGTTGCAGACTGCCAGACCGTG...AAAGGATCCCACCAGGCTGCTCATCTTCCATCCAAACCAAGGAGCCTGGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CAA 72 bp | TCCACAAAGGCATCTCTTCACCGACAGAGAGATAGGTaGTTCAGGAGCAGTGGGCGCAGGAGGCGAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STKASLHRQRDR*FRSSGRRRRKQ Trigger: CTGCTTTCGCCTCCTGCGCCCACTGCTCCTGAACAACCTATCTCTCTGTCGGTGAAGAGATGCCTTTGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR GCA 90 bp | CAGCGGCAGGCTCTGGAAGCTGTACCTTTGCATCCAGTGAGATTTCTGGAAGGTGCAATCTCGGTTTCCTaGAGGGTCCCGTGGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRQALEAVPLHPVRFLEGAISVS*RVPWFR Trigger: CCTAAACCACGGGACCCTGCAGGAAACCGAGATTGC...ACCTTCCAGAAATCTCACTGGATGCAAAGGTACAGCTTCCAGAGCCTGCCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGATGAGATCACACGGGGAGAGAGCTGCTATGTTTCTGCCAAGTCACTGGCAATCTCGGTTTCCTaGAGGGTCCCGTGGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGDEITRGESCYVSAKSLAISVS*RVPWFR Trigger: CCTAAACCACGGGACCCTGCAGGAAACCGAGATTGC...CAGTGACTTGGCAGAAACATAGCAGCTCTCTCCCCGTGTGATCTCATCTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR GCA 90 bp | CCAGTCAGTGTGTCAGCTCCTGAGATAAGCAGCGGCTCCACTGCTCACAGAACGTGCCGCGACAGGACTTaGAGACACAGCAGATTATAC | + |
|
Preference number: 4 (lower is better) Translates to: PVSVSAPEISSGSTAHRTCRDRT*RHSRLY Trigger: GTATAATCTGCTGTGTCTGCAAGTCCTGTCGCGGCA...CGTTCTGTGAGCAGTGGAGCCGCTGCTTATCTCAGGAGCTGACACACTGACTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR GCA 90 bp | CTCCGGCTCTGGGCCTCTGCCATGTGTCTTGTGGCAGTGGAACCAACACAGACGGTTGTGGATGGATCATaGTTTTTCTTCTTGCCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LRLWASAMCLVAVEPTQTVVDGS*FFFLPR Trigger: TCGCGGCAAGAAGAAAAAGCATGATCCATCCACAAC...CGTCTGTGTTGGTTCCACTGCCACAAGACACATGGCAGAGGCCCAGAGCCGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | GAAGGGACAACTCCCTCTGAACGGCAGTTTCTCCTGCCTGGAGATGAGATCACAACCGATGCCCTCGAGTaGCCGAGCTTATTCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGTTPSERQFLLPGDEITTDALE*PSLFLH Trigger: ATGCAGGAATAAGCTCGGCCACTCGAGGGCATCGGT...TGTGATCTCATCTCCAGGCAGGAGAAACTGCCGTTCAGAGGGAGTTGTCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CAA 72 bp | ACCGCCATGACTACAGTGAGTATTCACCCAGGCTCCTaGGTTTGGATGGAAGATGAGCAGCCTGGTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TAMTTVSIHPGS*VWMEDEQPGGI Trigger: GATCCCACCAGGCTGCTCATCTTCCATCCAAACCAAGGAGCCTGGGTGAATACTCACTGTAGTCATGGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CAA 72 bp | GGAGAACCCCAGCGGCAGGCTCTGGAAGCTGTACCTTaGCATCCAGTGAGATTTCTGGAAGGTGGGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GEPQRQALEAVP*HPVRFLEGGLL Trigger: TAACAACCCACCTTCCAGAAATCTCACTGGATGCAAAGGTACAGCTTCCAGAGCCTGCCGCTGGGGTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR GCA 90 bp | CCCGGCACAGTTGCCACCTTGTATCTTTGTAAACAAAGTCAGTTGGGCTGGTATCCAAAGAGAGCCCCATaGTCTGGCATCGCCGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGTVATLYLCKQSQLGWYPKRAP*SGIADW Trigger: CCAGTCGGCGATGCCAGAGCATGGGGCTCTCTTTGG...ATACCAGCCCAACTGACTTTGTTTACAAAGATACAAGGTGGCAACTGTGCCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR GCA 90 bp | CCACTTAGGGATACATTGCACTGCAGAGGCAAGGCTGATGATAACAGGTCTTTGCCAAAGAGAGCCCCATaGTCTGGCATCGCCGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLRDTLHCRGKADDNRSLPKRAP*SGIADW Trigger: CCAGTCGGCGATGCCAGAGCATGGGGCTCTCTTTGG...CAAAGACCTGTTATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCTAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR GCA 90 bp | CGCCCTGCGATGAGCCAGAGCTACAGACACTTGGGTTCCATCTACCAAAGTAGATGCGCTCAATGTAAATaGGGCAAACCGGGCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPAMSQSYRHLGSIYQSRCAQCK*GKPGTA Trigger: AGCAGTGCCCGGTTTGCCGCATTTACATTGAGCGCA...TCTACTTTGGTAGATGGAACCCAAGTGTCTGTAGCTCTGGCTCATCGCAGGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGATGAGATCACACGGGGAGAGAGCTGCTATGTTTCTGCCAAGTCACTGTGCGCTCAATGTAAATaGGGCAAACCGGGCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGDEITRGESCYVSAKSLCAQCK*GKPGTA Trigger: AGCAGTGCCCGGTTTGCCGCATTTACATTGAGCGCA...CAGTGACTTGGCAGAAACATAGCAGCTCTCTCCCCGTGTGATCTCATCTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR GCA 90 bp | CTCCGGCTCTGGGCCTCTGCCATGTGTCTTGTGGCAGTGGAACCAACACAGACGTCATTGTCCAGGTTCTaGAGACAGTACCAGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRLWASAMCLVAVEPTQTSLSRF*RQYQQN Trigger: ATTTTGCTGGTACTGTCTGCAGAACCTGGACAATGA...CGTCTGTGTTGGTTCCACTGCCACAAGACACATGGCAGAGGCCCAGAGCCGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR GCA 90 bp | CCAGTCAGTGTGTCAGCTCCTGAGATAAGCAGCGGCTCCACTGCTCACAGAACGCATGCTTTTTCTTCTTaGCGCGACAGGACTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVSVSAPEISSGSTAHRTHAFSS*RDRTCR Trigger: TCTGCAAGTCCTGTCGCGGCAAGAAGAAAAAGCATG...CGTTCTGTGAGCAGTGGAGCCGCTGCTTATCTCAGGAGCTGACACACTGACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | TTCACCCAGGCTCCTTGGTTTGGATGGAAGATGAGCAGCCTGGTGGGATCCTTTGAGCAGAATTTCAGGTaGCAAGAAGGGCACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FTQAPWFGWKMSSLVGSFEQNFR*QEGHST Trigger: GGTGGAGTGCCCTTCTTGCCACCTGAAATTCTGCTC...AAAGGATCCCACCAGGCTGCTCATCTTCCATCCAAACCAAGGAGCCTGGGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CAA 72 bp | ACGAGGACACCAGGACACCGGCCTTTCCCGGCACAGTaGCCACCTTGTATCTTTGTAAACAAAGTCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRTPGHRPFPAQ*PPCIFVNKVSW Trigger: CCAACTGACTTTGTTTACAAAGATACAAGGTGGCAACTGTGCCGGGAAAGGCCGGTGTCCTGGTGTCCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR TCA 90 bp | AGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGTCCGGACTGTGGGGCACAGCCTTCTCGGATTaGCAGCACCATATACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLKQSSQPAPQTQSGLWGTAFSD*QHHILF Trigger: AAACAGTATATGGTGCTGTCAATCCGAGAAGGCTGT...GCCCCACAGTCCGGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR TCA 90 bp | GAAGGGACAACTCCCTCTGAACGGCAGTTTCTCCTGCCTGGAGATGAGATCACAAGGTCACCAAGGCAATaGCACCTAATCCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGTTPSERQFLLPGDEITRSPRQ*HLIPQG Trigger: TCCTTGTGGGATTAGGTGTCATTGCCTTGGTGACCT...TGTGATCTCATCTCCAGGCAGGAGAAACTGCCGTTCAGAGGGAGTTGTCCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR TCA 90 bp | TTCACCCAGGCTCCTTGGTTTGGATGGAAGATGAGCAGCCTGGTGGGATCCTTTAGGTCACCAAGGCAATaGCACCTAATCCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FTQAPWFGWKMSSLVGSFRSPRQ*HLIPQG Trigger: TCCTTGTGGGATTAGGTGTCATTGCCTTGGTGACCT...AAAGGATCCCACCAGGCTGCTCATCTTCCATCCAAACCAAGGAGCCTGGGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR GCA 90 bp | TGTTTTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACACACGGTCTGGCAGTCTaGAACAGGACACCATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CFRVSQAKAKFPTCSTDTHGLAV*NRTPCP Trigger: CGGACATGGTGTCCTGTTGCAGACTGCCAGACCGTG...TGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR GCA 90 bp | CAGCGGCAGGCTCTGGAAGCTGTACCTTTGCATCCAGTGAGATTTCTGGAAGGTGGCCGAGCTTATTCCTaGATGGCCCTTTGTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRQALEAVPLHPVRFLEGGRAYS*MALCHS Trigger: ACTATGACAAAGGGCCATGCAGGAATAAGCTCGGCC...ACCTTCCAGAAATCTCACTGGATGCAAAGGTACAGCTTCCAGAGCCTGCCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR CCA 90 bp | CAACACCGAATGCTTTCAGGTAGGTTCAAAGTCTGGGCAGAGGCACTTCCAAAGCAGGTCTCCAGAGGGTaGGTTTTCCGCAGTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QHRMLSGRFKVWAEALPKQVSRG*VFRSHG Trigger: ACCATGACTGCGGAAAACCCACCCTCTGGAGACCTG...CTTTGGAAGTGCCTCTGCCCAGACTTTGAACCTACCTGAAAGCATTCGGTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | AACACAGACGTTTGCTCAGTTTGCAATGCTGCCAAGTGCGGCAATACCGCCATGATATGGCACACGGTCTaGCAGTCTGCAACAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: NTDVCSVCNAAKCGNTAMIWHTV*QSATGH Trigger: GTGTCCTGTTGCAGACTGCCAGACCGTGTGCCATAT...CATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR TCA 90 bp | GGAAGGTGGGTTGTTACACCCAGGTGTGAACCTGGTGGGCTTTGTCACAGCCAAACAGCCTTCTCGGATTaGCAGCACCATATACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRWVVTPRCEPGGLCHSQTAFSD*QHHILF Trigger: AAACAGTATATGGTGCTGTCAATCCGAGAAGGCTGT...TTGGCTGTGACAAAGCCCACCAGGTTCACACCTGGGTGTAACAACCCACCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR GCA 90 bp | TTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGTCCTGCCGCGACAGGACTTaGAGACACAGCAGATTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LESPRLKQSSQPAPQTQSCRDRT*RHSRLY Trigger: GTATAATCTGCTGTGTCTGCAAGTCCTGTCGCGGCA...GGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | TTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGTCCGGCACTCTTGGAGCATaGTCATCTTGTCCAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LESPRLKQSSQPAPQTQSGTLGA*SSCPET Trigger: AGTCTCTGGACAAGATGACCATGCTCCAAGAGTGCC...GGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | AACACAGACGTTTGCTCAGTTTGCAATGCTGCCAAGTGCGGCAATACCGCCATGGGCACTCTTGGAGCATaGTCATCTTGTCCAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: NTDVCSVCNAAKCGNTAMGTLGA*SSCPET Trigger: AGTCTCTGGACAAGATGACCATGCTCCAAGAGTGCC...CATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CAA 72 bp | CCATGTGTCTTGTGGCAGTGGAACCAACACAGACGTTaGCTCAGTTTGCAATGCTGCCAAGTGCGGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: PCVLWQWNQHRR*LSLQCCQVRQY Trigger: GTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTTGGTTCCACTGCCACAAGACACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| 3UTR CAA 72 bp | ACCAGGACACCGGCCTTTCCCGGCACAGTTGCCACCTaGTATCTTTGTAAACAAAGTCAGTTGGGCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TRTPAFPGTVAT*YLCKQSQLGWY Trigger: ATACCAGCCCAACTGACTTTGTTTACAAAGATACAAGGTGGCAACTGTGCCGGGAAAGGCCGGTGTCCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR GCA 90 bp | TTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGTCCCATGCTTTTTCTTCTTaGCGCGACAGGACTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LESPRLKQSSQPAPQTQSHAFSS*RDRTCR Trigger: TCTGCAAGTCCTGTCGCGGCAAGAAGAAAAAGCATG...GGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGGTTACATGAAATCGGCCCCACTTAGAACCAGGCAGGCCTGGAAAATTTCCTGCAGGGTCCCGTaGTTTAGGCACACCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISGYMKSAPLRTRQAWKISCRVP*FRHTMS Trigger: TGACATGGTGTGCCTAAACCACGGGACCCTGCAGGA...AATTTTCCAGGCCTGCCTGGTTCTAAGTGGGGCCGATTTCATGTAACCTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGATGAGATCACACGGGGAGAGAGCTGCTATGTTTCTGCCAAGTCACTGCTTTGTCATAGTGCCTaGGGAATATGTCATTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGDEITRGESCYVSAKSLLCHSA*GICHCP Trigger: TGGACAATGACATATTCCTCAGGCACTATGACAAAG...CAGTGACTTGGCAGAAACATAGCAGCTCTCTCCCCGTGTGATCTCATCTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR GCA 90 bp | TGTTTTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGGCCGAGCTTATTCCTaGATGGCCCTTTGTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CFRVSQAKAKFPTCSTDTGRAYS*MALCHS Trigger: ACTATGACAAAGGGCCATGCAGGAATAAGCTCGGCC...TGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | TTCTTGAGAGCACAGAAAGTACTCAGATTGTCTGGACAGCTCCTGGGAGACCAAATACACTGGCACTCTTaGAGCATGGTCATCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLRAQKVLRLSGQLLGDQIHWHS*SMVILS Trigger: GGACAAGATGACCATGCTCCAAGAGTGCCAGTGTAT...TTGGTCTCCCAGGAGCTGTCCAGACAATCTGAGTACTTTCTGTGCTCTCAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | TGTTTTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAATACACTGGCACTCTTaGAGCATGGTCATCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFRVSQAKAKFPTCSTDTIHWHS*SMVILS Trigger: GGACAAGATGACCATGCTCCAAGAGTGCCAGTGTAT...TGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | TGTTTTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGAGCTTATTCCTGCATaGCCCTTTGTCATAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFRVSQAKAKFPTCSTDTELIPA*PFVIVP Trigger: AGGCACTATGACAAAGGGCCATGCAGGAATAAGCTC...TGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGGTTACATGAAATCGGCCCCACTTAGAACCAGGCAGGCCTGGAAAATTGAGCTTATTCCTGCATaGCCCTTTGTCATAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISGYMKSAPLRTRQAWKIELIPA*PFVIVP Trigger: AGGCACTATGACAAAGGGCCATGCAGGAATAAGCTC...AATTTTCCAGGCCTGCCTGGTTCTAAGTGGGGCCGATTTCATGTAACCTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR CCA 90 bp | CTGTACAGACATCAGATGCTAATGTACACATGTGATCCCCTGAATATATACATGGAGCAGAATTTCAGGTaGCAAGAAGGGCACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LYRHQMLMYTCDPLNIYMEQNFR*QEGHST Trigger: GGTGGAGTGCCCTTCTTGCCACCTGAAATTCTGCTC...CATGTATATATTCAGGGGATCACATGTGTACATTAGCATCTGATGTCTGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR GCA 90 bp | CTGTACAGACATCAGATGCTAATGTACACATGTGATCCCCTGAATATATACATGCGTGCCAAGCATCCTTaGAACATGAGCAGAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYRHQMLMYTCDPLNIYMRAKHP*NMSRIS Trigger: TGAAATTCTGCTCATGTTGCAAGGATGCTTGGCACG...CATGTATATATTCAGGGGATCACATGTGTACATTAGCATCTGATGTCTGTACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR GCA 90 bp | CTGTACAGACATCAGATGCTAATGTACACATGTGATCCCCTGAATATATACATGGTTGTGGATGGATCATaGTTTTTCTTCTTGCCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LYRHQMLMYTCDPLNIYMVVDGS*FFFLPR Trigger: TCGCGGCAAGAAGAAAAAGCATGATCCATCCACAAC...CATGTATATATTCAGGGGATCACATGTGTACATTAGCATCTGATGTCTGTACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CCA 90 bp | CAACAAGAAAATCCAAGCCGACTTATTTGCTTTCCAAAGGCCACTTTCAAAGTAGTACAAAAGATACACTaGCACTCTTGGAGCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QQENPSRLICFPKATFKVVQKIH*HSWSMV Trigger: GACCATGCTCCAAGAGTGCCAGTGTATCTTTTGTAC...TACTTTGAAAGTGGCCTTTGGAAAGCAAATAAGTCGGCTTGGATTTTCTTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR CCA 90 bp | CTGTACAGACATCAGATGCTAATGTACACATGTGATCCCCTGAATATATACATGGTACAAAAGATACACTaGCACTCTTGGAGCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LYRHQMLMYTCDPLNIYMVQKIH*HSWSMV Trigger: GACCATGCTCCAAGAGTGCCAGTGTATCTTTTGTAC...CATGTATATATTCAGGGGATCACATGTGTACATTAGCATCTGATGTCTGTACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CAA 90 bp | CTCCGGCTCTGGGCCTCTGCCATGTGTCTTGTGGCAGTGGAACCAACACAGACGCAAACCGGGCACTGCTaGATGGGGGCGTCCGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LRLWASAMCLVAVEPTQTQTGHC*MGASAS Trigger: GGATGCGGACGCCCCCATCAAGCAGTGCCCGGTTTG...CGTCTGTGTTGGTTCCACTGCCACAAGACACATGGCAGAGGCCCAGAGCCGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS CCA 90 bp | GAGCTTGCAAGTGACGAGCGGGGCGGGAATCAGGTCTCCAGAGGGTaGGTTTTCCGCAGTCATGGTCAGACACTGGAGCCCATCGACGGA | + |
|
Preference number: 5 (lower is better) Translates to: ELASDERGGNQVSRG*VFRSHGQTLEPIDG Trigger: TCCGTCGATGGGCTCCAGTGTCTGACCATGACTGCGGAAAACCCACCCTCTGGAGACCTGATTCCCGCCCCGCTCGTCACTTGCAAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CAA 90 bp | AGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGTCCGGACTGTGGGGCTCACACAGGCAGAGCTaGCAAGTGACGAGCGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RLKQSSQPAPQTQSGLWGSHRQS*QVTSGA Trigger: CGCCCCGCTCGTCACTTGCAAGCTCTGCCTGTGTGA...GCCCCACAGTCCGGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS TCA 90 bp | AGCCTTCGTTGCGCTCAATGTAAATGCGGCAAACCGGGCACTGCTTaGTGGGGGCGTCCGCATCCGTTCCAAAGAGAGCCCCATGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLRCAQCKCGKPGTA*WGRPHPFQREPHAL Trigger: CAGAGCATGGGGCTCTCTTTGGAACGGATGCGGACGCCCCCATCAAGCAGTGCCCGGTTTGCCGCATTTACATTGAGCGCAACGAAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CAA 90 bp | CGCCCTGCGATGAGCCAGAGCTACAGACACTTGGGTTCCATCTACCAAAGTAGACAAACCGGGCACTGCTaGATGGGGGCGTCCGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RPAMSQSYRHLGSIYQSRQTGHC*MGASAS Trigger: GGATGCGGACGCCCCCATCAAGCAGTGCCCGGTTTG...TCTACTTTGGTAGATGGAACCCAAGTGTCTGTAGCTCTGGCTCATCGCAGGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS TCA 90 bp | TGGTCATCTTGTCCAGAGACTGTTCACACAGGCAGAGCTTGCAAGTaGCGAGCGGGGCGGGAATCAGGTCTCCAGAGGGTGGGTTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: WSSCPETVHTGRACK*RAGRESGLQRVGFP Trigger: CGGAAAACCCACCCTCTGGAGACCTGATTCCCGCCCCGCTCGTCACTTGCAAGCTCTGCCTGTGTGAACAGTCTCTGGACAAGATGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS CCA 90 bp | GAGCAGAATTTCAGGTGGCAAGAAGGGCACTCCACCAACACTGGCTaGCCTGGGTCTCCGGCTGAAATATGGCACACGGTCTGGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EQNFRWQEGHSTNTG*PGSPAEIWHTVWQS Trigger: AGACTGCCAGACCGTGTGCCATATTTCAGCCGGAGACCCAGGCCAGCCAGTGTTGGTGGAGTGCCCTTCTTGCCACCTGAAATTCTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS CCA 90 bp | TCCGCATCCGTTCCAAAGAGAGCCCCATGCTCTGGCATCGCCGACTaGCTGTCTCTACAGGAAGACTCCTCGTGCCAAGCATCCTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SASVPKRAPCSGIAD*LSLQEDSSCQASLQ Trigger: TTGCAAGGATGCTTGGCACGAGGAGTCTTCCTGTAGAGACAGCCAGTCGGCGATGCCAGAGCATGGGGCTCTCTTTGGAACGGATGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS TCA 90 bp | GACACCATGTCCGGAGGGGGTCCATGTGAACCTCTCGTTCAAACTTaGGCCGCTGATACAGCTGAAACTCATCCAGAGGCACCAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: DTMSGGGPCEPLVQT*AADTAETHPEAPNR Trigger: CCTGTTTGGTGCCTCTGGATGAGTTTCAGCTGTATCAGCGGCTCAAGTTTGAACGAGAGGTTCACATGGACCCCCTCCGGACATGGTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS GCA 90 bp | CCGACTGGCTGTCTCTACAGGAAGACTCCTCGTGCCAAGCATCCTTaGAACATGAGCAGAATTTCAGGTGGCAAGAAGGGCACTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PTGCLYRKTPRAKHP*NMSRISGGKKGTPP Trigger: TGGTGGAGTGCCCTTCTTGCCACCTGAAATTCTGCTCATGTTGCAAGGATGCTTGGCACGAGGAGTCTTCCTGTAGAGACAGCCAGTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS GCA 90 bp | TCCCACAAGGATCCCCACTACCTGTGTTCGGTTCCACATTACCGATaGCCTCGAGTGGCCGAGCTTATTCCTGCATGGCCCTTTGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: SHKDPHYLCSVPHYR*PRVAELIPAWPFVI Trigger: TATGACAAAGGGCCATGCAGGAATAAGCTCGGCCACTCGAGGGCATCGGTAATGTGGAACCGAACACAGGTAGTGGGGATCCTTGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS TCA 90 bp | GCTGTCTCTACAGGAAGACTCCTCGTGCCAAGCATCCTTGCAACATaGGCAGAATTTCAGGTGGCAAGAAGGGCACTCCACCAACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVSTGRLLVPSILAT*AEFQVARRALHQHW Trigger: CCAGTGTTGGTGGAGTGCCCTTCTTGCCACCTGAAATTCTGCTCATGTTGCAAGGATGCTTGGCACGAGGAGTCTTCCTGTAGAGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS GCA 90 bp | TGCTCTGGCATCGCCGACTGGCTGTCTCTACAGGAAGACTCCTCGTaGCAAGCATCCTTGCAACATGAGCAGAATTTCAGGTGGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CSGIADWLSLQEDSS*QASLQHEQNFRWQE Trigger: TTCTTGCCACCTGAAATTCTGCTCATGTTGCAAGGATGCTTGGCACGAGGAGTCTTCCTGTAGAGACAGCCAGTCGGCGATGCCAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CAA 90 bp | GGAAGGTGGGTTGTTACACCCAGGTGTGAACCTGGTGGGCTTTGTCACAGCCAATCATGCTTTTTCTTCTaGCCGCGACAGGACTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRWVVTPRCEPGGLCHSQSCFFF*PRQDLQ Trigger: CTGCAAGTCCTGTCGCGGCAAGAAGAAAAAGCATGA...TTGGCTGTGACAAAGCCCACCAGGTTCACACCTGGGTGTAACAACCCACCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS GCA 90 bp | AGGTTGTGGATGGATCATGCTTTTTCTTCTTGCCGCGACAGGACTTaGAGACACAGCAGATTATACAGGGAGAGGCCAGGAGCAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLWMDHAFSSCRDRT*RHSRLYRERPGAAR Trigger: CCTTGCTGCTCCTGGCCTCTCCCTGTATAATCTGCTGTGTCTGCAAGTCCTGTCGCGGCAAGAAGAAAAAGCATGATCCATCCACAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CAA 90 bp | CCTGGTGGGCTTTGTCACAGCCAAACGCTTGCTATAGGAACCCTTCCTGAAGCATGGAGCATGGTCATCTaGTCCAGAGACTGTTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PGGLCHSQTLAIGTLPEAWSMVI*SRDCSH Trigger: GTGTGAACAGTCTCTGGACAAGATGACCATGCTCCA...TGCTTCAGGAAGGGTTCCTATAGCAAGCGTTTGGCTGTGACAAAGCCCACCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS CCA 90 bp | GTTCCACATTACCGATGCCCTCGAGTGGCCGAGCTTATTCCTGCATaGCCCTTTGTCATAGTGCCTGAGGAATATGTCATTGTCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VPHYRCPRVAELIPA*PFVIVPEEYVIVQV Trigger: AACCTGGACAATGACATATTCCTCAGGCACTATGACAAAGGGCCATGCAGGAATAAGCTCGGCCACTCGAGGGCATCGGTAATGTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CAA 90 bp | TTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGTCCGATACACTGGCACTCTaGGAGCATGGTCATCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LESPRLKQSSQPAPQTQSDTLAL*EHGHLV Trigger: GACAAGATGACCATGCTCCAAGAGTGCCAGTGTATC...GGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CAA 90 bp | GAAGGGACAACTCCCTCTGAACGGCAGTTTCTCCTGCCTGGAGATGAGATCACACTGAGGAATATGTCATaGTCCAGGTTCTGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: EGTTPSERQFLLPGDEITLRNMS*SRFCRQ Trigger: CTGTCTGCAGAACCTGGACAATGACATATTCCTCAG...TGTGATCTCATCTCCAGGCAGGAGAAACTGCCGTTCAGAGGGAGTTGTCCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CAA 90 bp | AACACAGACGTTTGCTCAGTTTGCAATGCTGCCAAGTGCGGCAATACCGCCATGTCATGCTTTTTCTTCTaGCCGCGACAGGACTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NTDVCSVCNAAKCGNTAMSCFFF*PRQDLQ Trigger: CTGCAAGTCCTGTCGCGGCAAGAAGAAAAAGCATGA...CATGGCGGTATTGCCGCACTTGGCAGCATTGCAAACTGAGCAAACGTCTGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS TCA 90 bp | TCGAGTGGCCGAGCTTATTCCTGCATGGCCCTTTGTCATAGTGCCTaGGGAATATGTCATTGTCCAGGTTCTGCAGACAGTACCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSGRAYSCMALCHSA*GICHCPGSADSTSK Trigger: TTTGCTGGTACTGTCTGCAGAACCTGGACAATGACATATTCCTCAGGCACTATGACAAAGGGCCATGCAGGAATAAGCTCGGCCACTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS CCA 90 bp | GTTTCAGGCAGGGTGTACAAAAGATACACTGGCACTCTTGGAGCATaGTCATCTTGTCCAGAGACTGTTCACACAGGCAGAGCTTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSGRVYKRYTGTLGA*SSCPETVHTGRACK Trigger: CTTGCAAGCTCTGCCTGTGTGAACAGTCTCTGGACAAGATGACCATGCTCCAAGAGTGCCAGTGTATCTTTTGTACACCCTGCCTGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CAA 90 bp | TTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACAGTCCCTGAGGAATATGTCATaGTCCAGGTTCTGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: LESPRLKQSSQPAPQTQSLRNMS*SRFCRQ Trigger: CTGTCTGCAGAACCTGGACAATGACATATTCCTCAG...GGACTGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
||
| CDS-3UTR CAA 90 bp | CAACAAGAAAATCCAAGCCGACTTATTTGCTTTCCAAAGGCCACTTTCAAAGTATCACACAGGCAGAGCTaGCAAGTGACGAGCGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QQENPSRLICFPKATFKVSHRQS*QVTSGA Trigger: CGCCCCGCTCGTCACTTGCAAGCTCTGCCTGTGTGA...TACTTTGAAAGTGGCCTTTGGAAAGCAAATAAGTCGGCTTGGATTTTCTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
||
| CDS-3UTR CAA 90 bp | CCACTTAGGGATACATTGCACTGCAGAGGCAAGGCTGATGATAACAGGTCTTTGTGGAGCATGGTCATCTaGTCCAGAGACTGTTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PLRDTLHCRGKADDNRSLWSMVI*SRDCSH Trigger: GTGTGAACAGTCTCTGGACAAGATGACCATGCTCCA...CAAAGACCTGTTATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCTAAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CCA 90 bp | ATATACTGTTTCAGGCAGGGTGTACAAAAGATACACTGGCACTCTTaGAGCATGGTCATCTTGTCCAGAGACTGTTCACACAGGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: IYCFRQGVQKIHWHS*SMVILSRDCSHRQS Trigger: GCTCTGCCTGTGTGAACAGTCTCTGGACAAGATGACCATGCTCCAAGAGTGCCAGTGTATCTTTTGTACACCCTGCCTGAAACAGTATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CCA 90 bp | GACAGCACCATATACTGTTTCAGGCAGGGTGTACAAAAGATACACTaGCACTCTTGGAGCATGGTCATCTTGTCCAGAGACTGTTCACAC | + |
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Preference number: 5 (lower is better) Translates to: DSTIYCFRQGVQKIH*HSWSMVILSRDCSH Trigger: GTGTGAACAGTCTCTGGACAAGATGACCATGCTCCAAGAGTGCCAGTGTATCTTTTGTACACCCTGCCTGAAACAGTATATGGTGCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS-3UTR CAA 90 bp | CCACTTAGGGATACATTGCACTGCAGAGGCAAGGCTGATGATAACAGGTCTTTGCACAGCCTTCTCGGATaGACAGCACCATATACTGTT | + |
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Preference number: 5 (lower is better) Translates to: PLRDTLHCRGKADDNRSLHSLLG*TAPYTV Trigger: AACAGTATATGGTGCTGTCAATCCGAGAAGGCTGTG...CAAAGACCTGTTATCATCAGCCTTGCCTCTGCAGTGCAATGTATCCCTAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS-3UTR CAA 90 bp | TTCTTGAGAGCACAGAAAGTACTCAGATTGTCTGGACAGCTCCTGGGAGACCAACACAGCCTTCTCGGATaGACAGCACCATATACTGTT | + |
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Preference number: 5 (lower is better) Translates to: FLRAQKVLRLSGQLLGDQHSLLG*TAPYTV Trigger: AACAGTATATGGTGCTGTCAATCCGAGAAGGCTGTG...TTGGTCTCCCAGGAGCTGTCCAGACAATCTGAGTACTTTCTGTGCTCTCAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS-3UTR CAA 90 bp | TGTTTTAGAGTCTCCCAGGCTAAAGCAAAGTTCCCAACCTGCTCCACAGACACATCGTGCCAAGCATCCTaGCAACATGAGCAGAATTTC | + |
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Preference number: 5 (lower is better) Translates to: CFRVSQAKAKFPTCSTDTSCQAS*QHEQNF Trigger: GAAATTCTGCTCATGTTGCAAGGATGCTTGGCACGA...TGTGTCTGTGGAGCAGGTTGGGAACTTTGCTTTAGCCTGGGAGACTCTAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS TCA 90 bp | CACCATGTCAGGACAAGTGATAGGAGATCCACAGCCTTCTCGGATTaGCAGCACCATATACTGTTTCAGGCAGGGTGTACAAAAGATACA | + |
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Preference number: 5 (lower is better) Translates to: HHVRTSDRRSTAFSD*QHHILFQAGCTKDT Trigger: TGTATCTTTTGTACACCCTGCCTGAAACAGTATATGGTGCTGTCAATCCGAGAAGGCTGTGGATCTCCTATCACTTGTCCTGACATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS-3UTR CAA 90 bp | CAACAAGAAAATCCAAGCCGACTTATTTGCTTTCCAAAGGCCACTTTCAAAGTATCGTGCCAAGCATCCTaGCAACATGAGCAGAATTTC | + |
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Preference number: 5 (lower is better) Translates to: QQENPSRLICFPKATFKVSCQAS*QHEQNF Trigger: GAAATTCTGCTCATGTTGCAAGGATGCTTGGCACGA...TACTTTGAAAGTGGCCTTTGGAAAGCAAATAAGTCGGCTTGGATTTTCTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068891.12 |
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| CDS CCA 72 bp | TGGCCTGGGTCTCCGGCTGAAATATGGCACACGGTCTaGCAGTCTGCAACAGGACACCATGTCCGGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: WPGSPAEIWHTV*QSATGHHVRRG Trigger: CCCCCTCCGGACATGGTGTCCTGTTGCAGACTGCCAGACCGTGTGCCATATTTCAGCCGGAGACCCAGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS TCA 72 bp | GCACTCCACCAACACTGGCTGGCCTGGGTCTCCGGCTaGAATATGGCACACGGTCTGGCAGTCTGCAACAGG | + |
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Preference number: 6 (lower is better) Translates to: ALHQHWLAWVSG*NMAHGLAVCNR Trigger: CCTGTTGCAGACTGCCAGACCGTGTGCCATATTTCAGCCGGAGACCCAGGCCAGCCAGTGTTGGTGGAGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS GCA 72 bp | ATGGGGGCGTCCGCATCCGTTCCAAAGAGAGCCCCATaGTCTGGCATCGCCGACTGGCTGTCTCTACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: MGASASVPKRAP*SGIADWLSLQE Trigger: TTCCTGTAGAGACAGCCAGTCGGCGATGCCAGAGCATGGGGCTCTCTTTGGAACGGATGCGGACGCCCCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CCA 72 bp | GGCGTCCGCATCCGTTCCAAAGAGAGCCCCATGCTCTaGCATCGCCGACTGGCTGTCTCTACAGGAAGACTC | + |
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Preference number: 6 (lower is better) Translates to: GVRIRSKESPML*HRRLAVSTGRL Trigger: GAGTCTTCCTGTAGAGACAGCCAGTCGGCGATGCCAGAGCATGGGGCTCTCTTTGGAACGGATGCGGACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS TCA 72 bp | TGTCCAGAGACTGTTCACACAGGCAGAGCTTGCAAGTaGCGAGCGGGGCGGGAATCAGGTCTCCAGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: CPETVHTGRACK*RAGRESGLQRV Trigger: CACCCTCTGGAGACCTGATTCCCGCCCCGCTCGTCACTTGCAAGCTCTGCCTGTGTGAACAGTCTCTGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS TCA 72 bp | TGCGCTCAATGTAAATGCGGCAAACCGGGCACTGCTTaGTGGGGGCGTCCGCATCCGTTCCAAAGAGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: CAQCKCGKPGTA*WGRPHPFQREP Trigger: GGGCTCTCTTTGGAACGGATGCGGACGCCCCCATCAAGCAGTGCCCGGTTTGCCGCATTTACATTGAGCGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CCA 72 bp | TTCAGGTGGCAAGAAGGGCACTCCACCAACACTGGCTaGCCTGGGTCTCCGGCTGAAATATGGCACACGGTC | + |
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Preference number: 6 (lower is better) Translates to: FRWQEGHSTNTG*PGSPAEIWHTV Trigger: GACCGTGTGCCATATTTCAGCCGGAGACCCAGGCCAGCCAGTGTTGGTGGAGTGCCCTTCTTGCCACCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CAA 90 bp | TGGAGCATGGTCATCTTGTCCAGAGACTGTTCACACAGGCAGAGCTaGCAAGTGACGAGCGGGGCGGGAATCAGGTCTCCAGAGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: WSMVILSRDCSHRQS*QVTSGAGIRSPEGG Trigger: CCCACCCTCTGGAGACCTGATTCCCGCCCCGCTCGTCACTTGCAAGCTCTGCCTGTGTGAACAGTCTCTGGACAAGATGACCATGCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS GCA 72 bp | GATCCCCACTACCTGTGTTCGGTTCCACATTACCGATaGCCTCGAGTGGCCGAGCTTATTCCTGCATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: DPHYLCSVPHYR*PRVAELIPAWP Trigger: GGGCCATGCAGGAATAAGCTCGGCCACTCGAGGGCATCGGTAATGTGGAACCGAACACAGGTAGTGGGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CCA 72 bp | ACCAACACTGGCTGGCCTGGGTCTCCGGCTGAAATATaGCACACGGTCTGGCAGTCTGCAACAGGACACCAT | + |
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Preference number: 6 (lower is better) Translates to: TNTGWPGSPAEI*HTVWQSATGHH Trigger: ATGGTGTCCTGTTGCAGACTGCCAGACCGTGTGCCATATTTCAGCCGGAGACCCAGGCCAGCCAGTGTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CCA 72 bp | GTTCCAAAGAGAGCCCCATGCTCTGGCATCGCCGACTaGCTGTCTCTACAGGAAGACTCCTCGTGCCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: VPKRAPCSGIAD*LSLQEDSSCQA Trigger: TGCTTGGCACGAGGAGTCTTCCTGTAGAGACAGCCAGTCGGCGATGCCAGAGCATGGGGCTCTCTTTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CAA 72 bp | GTCATCTTGTCCAGAGACTGTTCACACAGGCAGAGCTaGCAAGTGACGAGCGGGGCGGGAATCAGGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VILSRDCSHRQS*QVTSGAGIRSP Trigger: TGGAGACCTGATTCCCGCCCCGCTCGTCACTTGCAAGCTCTGCCTGTGTGAACAGTCTCTGGACAAGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CAA 90 bp | GCCGACTGGCTGTCTCTACAGGAAGACTCCTCGTGCCAAGCATCCTaGCAACATGAGCAGAATTTCAGGTGGCAAGAAGGGCACTCCACC | + |
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Preference number: 6 (lower is better) Translates to: ADWLSLQEDSSCQAS*QHEQNFRWQEGHST Trigger: GGTGGAGTGCCCTTCTTGCCACCTGAAATTCTGCTCATGTTGCAAGGATGCTTGGCACGAGGAGTCTTCCTGTAGAGACAGCCAGTCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS GCA 72 bp | TCATCCAGAGGCACCAAACAGGCAATCTCGGTTTCCTaGAGGGTCCCGTGGTTTAGGCACACCATGTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSRGTKQAISVS*RVPWFRHTMSG Trigger: TCCTGACATGGTGTGCCTAAACCACGGGACCCTGCAGGAAACCGAGATTGCCTGTTTGGTGCCTCTGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS TCA 72 bp | TCCGGAGGGGGTCCATGTGAACCTCTCGTTCAAACTTaGGCCGCTGATACAGCTGAAACTCATCCAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SGGGPCEPLVQT*AADTAETHPEA Trigger: TGCCTCTGGATGAGTTTCAGCTGTATCAGCGGCTCAAGTTTGAACGAGAGGTTCACATGGACCCCCTCCGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS GCA 72 bp | ATCGCCGACTGGCTGTCTCTACAGGAAGACTCCTCGTaGCAAGCATCCTTGCAACATGAGCAGAATTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: IADWLSLQEDSS*QASLQHEQNFR Trigger: CCTGAAATTCTGCTCATGTTGCAAGGATGCTTGGCACGAGGAGTCTTCCTGTAGAGACAGCCAGTCGGCGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CAA 90 bp | CAGGGTGTACAAAAGATACACTGGCACTCTTGGAGCATGGTCATCTaGTCCAGAGACTGTTCACACAGGCAGAGCTTGCAAGTGACGAGC | + |
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Preference number: 6 (lower is better) Translates to: QGVQKIHWHSWSMVI*SRDCSHRQSLQVTS Trigger: GCTCGTCACTTGCAAGCTCTGCCTGTGTGAACAGTCTCTGGACAAGATGACCATGCTCCAAGAGTGCCAGTGTATCTTTTGTACACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS GCA 72 bp | TGTCTCTACAGGAAGACTCCTCGTGCCAAGCATCCTTaGAACATGAGCAGAATTTCAGGTGGCAAGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: CLYRKTPRAKHP*NMSRISGGKKG Trigger: GCCCTTCTTGCCACCTGAAATTCTGCTCATGTTGCAAGGATGCTTGGCACGAGGAGTCTTCCTGTAGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CCA 72 bp | TACCGATGCCCTCGAGTGGCCGAGCTTATTCCTGCATaGCCCTTTGTCATAGTGCCTGAGGAATATGTCATT | + |
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Preference number: 6 (lower is better) Translates to: YRCPRVAELIPA*PFVIVPEEYVI Trigger: AATGACATATTCCTCAGGCACTATGACAAAGGGCCATGCAGGAATAAGCTCGGCCACTCGAGGGCATCGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CAA 72 bp | CTGTCTCTACAGGAAGACTCCTCGTGCCAAGCATCCTaGCAACATGAGCAGAATTTCAGGTGGCAAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LSLQEDSSCQAS*QHEQNFRWQEG Trigger: CCCTTCTTGCCACCTGAAATTCTGCTCATGTTGCAAGGATGCTTGGCACGAGGAGTCTTCCTGTAGAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS TCA 72 bp | AGGACAAGTGATAGGAGATCCACAGCCTTCTCGGATTaGCAGCACCATATACTGTTTCAGGCAGGGTGTACA | + |
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Preference number: 6 (lower is better) Translates to: RTSDRRSTAFSD*QHHILFQAGCT Trigger: TGTACACCCTGCCTGAAACAGTATATGGTGCTGTCAATCCGAGAAGGCTGTGGATCTCCTATCACTTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS TCA 72 bp | CGAGCTTATTCCTGCATGGCCCTTTGTCATAGTGCCTaGGGAATATGTCATTGTCCAGGTTCTGCAGACAGT | + |
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Preference number: 6 (lower is better) Translates to: RAYSCMALCHSA*GICHCPGSADS Trigger: ACTGTCTGCAGAACCTGGACAATGACATATTCCTCAGGCACTATGACAAAGGGCCATGCAGGAATAAGCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CCA 72 bp | AGGGTGTACAAAAGATACACTGGCACTCTTGGAGCATaGTCATCTTGTCCAGAGACTGTTCACACAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RVYKRYTGTLGA*SSCPETVHTGR Trigger: TCTGCCTGTGTGAACAGTCTCTGGACAAGATGACCATGCTCCAAGAGTGCCAGTGTATCTTTTGTACACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CAA 72 bp | CAAAAGATACACTGGCACTCTTGGAGCATGGTCATCTaGTCCAGAGACTGTTCACACAGGCAGAGCTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: QKIHWHSWSMVI*SRDCSHRQSLQ Trigger: TTGCAAGCTCTGCCTGTGTGAACAGTCTCTGGACAAGATGACCATGCTCCAAGAGTGCCAGTGTATCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CAA 90 bp | CATATACTGTTTCAGGCAGGGTGTACAAAAGATACACTGGCACTCTaGGAGCATGGTCATCTTGTCCAGAGACTGTTCACACAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: HILFQAGCTKDTLAL*EHGHLVQRLFTQAE Trigger: CTCTGCCTGTGTGAACAGTCTCTGGACAAGATGACCATGCTCCAAGAGTGCCAGTGTATCTTTTGTACACCCTGCCTGAAACAGTATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CAA 72 bp | TTTCAGGCAGGGTGTACAAAAGATACACTGGCACTCTaGGAGCATGGTCATCTTGTCCAGAGACTGTTCACA | + |
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Preference number: 6 (lower is better) Translates to: FQAGCTKDTLAL*EHGHLVQRLFT Trigger: TGTGAACAGTCTCTGGACAAGATGACCATGCTCCAAGAGTGCCAGTGTATCTTTTGTACACCCTGCCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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| CDS CCA 72 bp | ATATACTGTTTCAGGCAGGGTGTACAAAAGATACACTaGCACTCTTGGAGCATGGTCATCTTGTCCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: IYCFRQGVQKIH*HSWSMVILSRD Trigger: GTCTCTGGACAAGATGACCATGCTCCAAGAGTGCCAGTGTATCTTTTGTACACCCTGCCTGAAACAGTATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068891.12 ENSMUST00000110111.4 |
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