Pregenerated sensors for RNF141 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030788Ensembl transcript IDs: ENSMUST00000106682.10, ENSMUST00000175648.2, ENSMUST00000175981.8, ENSMUST00000176210.2, ENSMUST00000176716.3, ENSMUST00000177236.8, ENSMUST00000177462.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGGCGGAGAAGCTAGGTCGGAAGATCACCCTGCGGCAGGTGTTTaGCAGCCTGCACATGGACCCCTACGACCTCACGGTGGACTCGCT | + |
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Preference number: 1 (lower is better) Translates to: CGGEARSEDHPAAGV*QPAHGPLRPHGGLA Trigger: AGCGAGTCCACCGTGAGGTCGTAGGGGTCCATGTGCAGGCTGTCAAACACCTGCCGCAGGGTGATCTTCCGACCTAGCTTCTCCGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
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| 3UTR GCA 90 bp | GCACATGGACCCCTACGACCTCACGGTGGACTCGCTGGATGTTCATaGAGTAAGCTAGCTCTGCCCTGGGTACTTCTATCAGGAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: AHGPLRPHGGLAGCS*SKLALPWVLLSGVL Trigger: GAGCACTCCTGATAGAAGTACCCAGGGCAGAGCTAGCTTACTGCATGAACATCCAGCGAGTCCACCGTGAGGTCGTAGGGGTCCATGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
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| 3UTR CCA 90 bp | GGAGTGCTCTGTCCACAGAAGCCAGCATGCCTGTGCTTGGACAGTTaGTGGCTGGGGAAATCATCTTACTTTGCTTGTAGTAGAGCCGTG | + |
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Preference number: 1 (lower is better) Translates to: GVLCPQKPACLCLDS*WLGKSSYFACSRAV Trigger: CACGGCTCTACTACAAGCAAAGTAAGATGATTTCCCCAGCCACCAACTGTCCAAGCACAGGCATGCTGGCTTCTGTGGACAGAGCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
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| 3UTR TCA 90 bp | ATCAGTGTTCTGCCTGCATGTACGTATGTGCACCACATGTATGCCTaGTGCCAGAGAGGCTTGGAAGAGGCCATTGGATTCCCAGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: ISVLPACTYVHHMYA*CQRGLEEAIGFPGS Trigger: GCTTCCTGGGAATCCAATGGCCTCTTCCAAGCCTCTCTGGCATCAGGCATACATGTGGTGCACATACGTACATGCAGGCAGAACACTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
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| 3UTR TCA 90 bp | AGAGTAAGACTTTCTCGGGGTTGTGAAACCATCTCAGCTAAGGTATaGCAGACAACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTGC | + |
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Preference number: 1 (lower is better) Translates to: RVRLSRGCETISAKV*QTTALCLPACSADC Trigger: GCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGTTGTCTGTCATACCTTAGCTGAGATGGTTTCACAACCCCGAGAAAGTCTTACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR CCA 90 bp | ACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTGCTTAGCCATTTaGTGTCACTGCCCTGTCCTTACAGTGAATGGACTATTGATGTCT | + |
|
Preference number: 1 (lower is better) Translates to: TALCLPACSADCLAI*CHCPVLTVNGLLMS Trigger: AGACATCAATAGTCCATTCACTGTAAGGACAGGGCAGTGACACCAAATGGCTAAGCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR GCA 90 bp | TTGTATCAGTGTTCTGCCTGCATGTACGTATGTGCACCACATGTATaGCTGATGCCAGAGAGGCTTGGAAGAGGCCATTGGATTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LYQCSACMYVCAPHV*LMPERLGRGHWIPR Trigger: CCTGGGAATCCAATGGCCTCTTCCAAGCCTCTCTGGCATCAGGCATACATGTGGTGCACATACGTACATGCAGGCAGAACACTGATACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
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| 3UTR CCA 90 bp | TCTGTCCACAGAAGCCAGCATGCCTGTGCTTGGACAGTTGGTGGCTaGGGAAATCATCTTACTTTGCTTGTAGTAGAGCCGTGGAAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: SVHRSQHACAWTVGG*GNHLTLLVVEPWKE Trigger: TTCCTTCCACGGCTCTACTACAAGCAAAGTAAGATGATTTCCCCAGCCACCAACTGTCCAAGCACAGGCATGCTGGCTTCTGTGGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
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| 3UTR GCA 90 bp | ACATCTGGAGTCACCACCCAGTTCAATGGAATGCATAGAGAACTCTaGTTACTACTTGATAAGGCAGTTGGAGACACTGACGCTTCACAG | + |
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Preference number: 1 (lower is better) Translates to: TSGVTTQFNGMHREL*LLLDKAVGDTDASQ Trigger: CTGTGAAGCGTCAGTGTCTCCAACTGCCTTATCAAGTAGTAAGCAGAGTTCTCTATGCATTCCATTGAACTGGGTGGTGACTCCAGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
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| 3UTR CCA 90 bp | AGACTGCTTAGCCATTTGGTGTCACTGCCCTGTCCTTACAGTGAATaGACTATTGATGTCTTCAGTATTTGGGGGCAGAATCAAGTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: RLLSHLVSLPCPYSE*TIDVFSIWGQNQVR Trigger: TCTGACTTGATTCTGCCCCCAAATACTGAAGACATCAATAGTCCATTCACTGTAAGGACAGGGCAGTGACACCAAATGGCTAAGCAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR CCA 90 bp | AACCGAAGCCTCAGAAAGGCGTCTTTACCTAAAATAAACGCTGTCTaGCTCAGGACTGGATGCCTCTGTGGAATCTGGAAATATAAAATG | + |
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Preference number: 1 (lower is better) Translates to: NRSLRKASLPKINAV*LRTGCLCGIWKYKM Trigger: CATTTTATATTTCCAGATTCCACAGAGGCATCCAGTCCTGAGCCAGACAGCGTTTATTTTAGGTAAAGACGCCTTTCTGAGGCTTCGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR TCA 90 bp | AAACTTAAACCTACTAAAAAGATGCCAGAACAGTCCCTCCCTCCCTaGAAAGCAGTAGTGTCAAGTATTGCTGCTATCTGTAGCAAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: KLKPTKKMPEQSLPP*KAVVSSIAAICSKG Trigger: CCCTTTGCTACAGATAGCAGCAATACTTGACACTACTGCTTTTCAGGGAGGGAGGGACTGTTCTGGCATCTTTTTAGTAGGTTTAAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR CCA 90 bp | ACAGGGACAGTTGAAACTTGCCAAAAATCTGTGAGAAGACTTCTATaGAACGCTAACATTTCTTACAGGGGACTTATTTCATGCACTAGC | + |
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Preference number: 1 (lower is better) Translates to: TGTVETCQKSVRRLL*NANISYRGLISCTS Trigger: GCTAGTGCATGAAATAAGTCCCCTGTAAGAAATGTTAGCGTTCCATAGAAGTCTTCTCACAGATTTTTGGCAAGTTTCAACTGTCCCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 ENSMUST00000177462.8 |
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| 3UTR GCA 90 bp | CAATTGTGTACATCTATACTTAGGAAAACAGGGACAGTTGAAACTTaGCAAAAATCTGTGAGAAGACTTCTATGGAACGCTAACATTTCT | + |
|
Preference number: 1 (lower is better) Translates to: QLCTSILRKTGTVET*QKSVRRLLWNANIS Trigger: AGAAATGTTAGCGTTCCATAGAAGTCTTCTCACAGATTTTTGGCAAGTTTCAACTGTCCCTGTTTTCCTAAGTATAGATGTACACAATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR TCA 90 bp | GATGGAACCCAGGCTTTATATATATTAGGTAAGCACTCTACCAACTaGGTTACACCTCTAGCCCTGAATTGTTATTATTTTTACAAAACA | + |
|
Preference number: 1 (lower is better) Translates to: DGTQALYILGKHSTN*VTPLALNCYYFYKT Trigger: TGTTTTGTAAAAATAATAACAATTCAGGGCTAGAGGTGTAACTCAGTTGGTAGAGTGCTTACCTAATATATATAAAGCCTGGGTTCCATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCCCGACAGAACTGTGGCGGAGAAGCTAGGTCGGAAGATCACCCTGCGGCAGAAGCCAGCATGCCTGTaGTTGGACAGTTGGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: EPDRTVAEKLGRKITLRQKPACL*LDSWWL Trigger: CAGCCACCAACTGTCCAAGCACAGGCATGCTGGCTT...CTGCCGCAGGGTGATCTTCCGACCTAGCTTCTCCGCCACAGTTCTGTCGGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGCGGAGAAGCTAGGTCGGAAGATCACCCTGCGGCAGGTGTTTGACAGCCCACAGAAGCCAGCATaGCTGTGCTTGGACAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: TVAEKLGRKITLRQVFDSPQKPA*LCLDSW Trigger: CCAACTGTCCAAGCACAGGCATGCTGGCTTCTGTGG...GCTGTCAAACACCTGCCGCAGGGTGATCTTCCGACCTAGCTTCTCCGCCACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTTCTGCCTGCATGTACGTATGTGCACCACATGTATGCCTGATGCCAGAGAGTGAGGCAGAGCACTaGGTTTCAGGACACCTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: QCSACMYVCAPHVCLMPESEAEH*VSGHLG Trigger: GCCTAGGTGTCCTGAAACTCAGTGCTCTGCCTCACT...CTCTGGCATCAGGCATACATGTGGTGCACATACGTACATGCAGGCAGAACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
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| 3UTR-3UTR TCA 90 bp | TCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGATGCCTGAATAGTGCACAGTCCCTCCCTCCCTaGAAAGCAGTAGTGTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SLRPHSCHGSLSRCLNSAQSLPP*KAVVSS Trigger: ACTTGACACTACTGCTTTTCAGGGAGGGAGGGACTG...TGCACTATTCAGGCATCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR CAA 90 bp | AACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTGCTTAGCCATTaGGTGTCACTGCCCTGTCCTTACAGTGAATGGACTATTGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: NSTVLARMLGRLLSH*VSLPCPYSEWTIDV Trigger: GACATCAATAGTCCATTCACTGTAAGGACAGGGCAGTGACACCAAATGGCTAAGCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCCTTACAGTGAATGGACTATTGATGTCTTCAGTATTTGGGGGCAGAATCCACTGTGGCTGTCACTaGGGCCGCACTCCTGTCACG | + |
|
Preference number: 2 (lower is better) Translates to: PVLTVNGLLMSSVFGGRIHCGCH*GRTPVT Trigger: CGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTG...GATTCTGCCCCCAAATACTGAAGACATCAATAGTCCATTCACTGTAAGGACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR GCA 90 bp | TCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGATGCCTGAATAGTGCATGGCTCAGGACTGGATaGCTCTGTGGAATCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SLRPHSCHGSLSRCLNSAWLRTG*LCGIWK Trigger: TTTCCAGATTCCACAGAGGCATCCAGTCCTGAGCCA...TGCACTATTCAGGCATCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR CCA 90 bp | GGTATGACAGACAACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTGCTTAGCGTAGCCCACCATACATaGAAGACATGGGAGTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: GMTDNSTVLARMLGRLLSVAHHT*KTWEFI Trigger: AATAAACTCCCATGTCTTCCATGTATGGTGGGCTAC...GCTAAGCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGTTGTCTGTCATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR GCA 90 bp | GGTATGACAGACAACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTGCTTAGCGGGACAGTTGAAACTTaGCAAAAATCTGTGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: GMTDNSTVLARMLGRLLSGTVET*QKSVRR Trigger: TCTTCTCACAGATTTTTGGCAAGTTTCAACTGTCCC...GCTAAGCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGTTGTCTGTCATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR CCA 90 bp | GGTATGACAGACAACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTGCTTAGCAAGCCAATCAAGGTCTaGAGTTTAGGGTTTTACAAC | + |
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Preference number: 2 (lower is better) Translates to: GMTDNSTVLARMLGRLLSKPIKV*SLGFYN Trigger: GTTGTAAAACCCTAAACTCCAGACCTTGATTGGCTT...GCTAAGCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGTTGTCTGTCATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTGTTCCAGGTAGACACACACATTCATGCAGCGGCCTGCATGAATCAGAAGACTTCAGTAGACACTTaGACTCCGCTGTCCATAGCA | + |
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Preference number: 2 (lower is better) Translates to: DVFQVDTHIHAAACMNQKTSVDT*TPLSIA Trigger: TGCTATGGACAGCGGAGTGCAAGTGTCTACTGAAGT...CTTCTGATTCATGCAGGCCGCTGCATGAATGTGTGTGTCTACCTGGAACACATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
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| 3UTR-3UTR CCA 90 bp | GGTATGACAGACAACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTGCTTAGCTGTCCTTACAGTGAATaGACTATTGATGTCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GMTDNSTVLARMLGRLLSCPYSE*TIDVFS Trigger: ACTGAAGACATCAATAGTCCATTCACTGTAAGGACA...GCTAAGCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGTTGTCTGTCATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTTGTAAACCACTAATGTGGGTGCTGGGGATTAAACTCTGGTCCTCTGCACTTGCCAAAAATCTGTaGGAAGACTTCTATGGAACG | + |
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Preference number: 2 (lower is better) Translates to: GGCKPLMWVLGIKLWSSALAKNL*EDFYGT Trigger: CGTTCCATAGAAGTCTTCTCACAGATTTTTGGCAAG...TGCAGAGGACCAGAGTTTAATCCCCAGCACCCACATTAGTGGTTTACAACCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
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| 3UTR CAA 90 bp | TCACCACCCAGTTCAATGGAATGCATAGAGAACTCTGCTTACTACTaGATAAGGCAGTTGGAGACACTGACGCTTCACAGTAGACCAGTT | + |
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Preference number: 2 (lower is better) Translates to: SPPSSMECIENSAYY*IRQLETLTLHSRPV Trigger: AACTGGTCTACTGTGAAGCGTCAGTGTCTCCAACTGCCTTATCAAGTAGTAAGCAGAGTTCTCTATGCATTCCATTGAACTGGGTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAACTGTAGCCCACCATACATGGAAGACATGGGAGTTTATTTAAGAACGGGAAGAGGGTGGGAAAACTaGTATTTCTGTGTGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: ANCSPPYMEDMGVYLRTGRGWEN*YFCVCH Trigger: GTGGCACACACAGAAATATCAGTTTTCCCACCCTCT...TCCCGTTCTTAAATAAACTCCCATGTCTTCCATGTATGGTGGGCTACAGTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175648.2 ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCCTTACAGTGAATGGACTATTGATGTCTTCAGTATTTGGGGGCAGAATCAGAGGGTGGGAAAACTaGTATTTCTGTGTGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: PVLTVNGLLMSSVFGGRIRGWEN*YFCVCH Trigger: GTGGCACACACAGAAATATCAGTTTTCCCACCCTCT...GATTCTGCCCCCAAATACTGAAGACATCAATAGTCCATTCACTGTAAGGACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCCTTACAGTGAATGGACTATTGATGTCTTCAGTATTTGGGGGCAGAATCTTTCTAAAGCAGCCATaGAGATCCCTCCGGTACAGT | + |
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Preference number: 2 (lower is better) Translates to: PVLTVNGLLMSSVFGGRIFLKQP*RSLRYS Trigger: ACTGTACCGGAGGGATCTTCATGGCTGCTTTAGAAA...GATTCTGCCCCCAAATACTGAAGACATCAATAGTCCATTCACTGTAAGGACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAATTGGGCCACAGTACTGAAGGATCCATAATGAACCACAAGGGGGCAGAGAGAATAGGTGGACTGTaGGAAATATGGCTAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: KQLGHSTEGSIMNHKGAERIGGL*EIWLNS Trigger: ACTGTTTAGCCATATTTCCCACAGTCCACCTATTCT...CTCTGCCCCCTTGTGGTTCATTATGGATCCTTCAGTACTGTGGCCCAATTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR CAA 90 bp | TCAATGGAATGCATAGAGAACTCTGCTTACTACTTGATAAGGCAGTaGGAGACACTGACGCTTCACAGTAGACCAGTTAGTATCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SMECIENSAYYLIRQ*ETLTLHSRPVSIPE Trigger: CTCTGGGATACTAACTGGTCTACTGTGAAGCGTCAGTGTCTCCAACTGCCTTATCAAGTAGTAAGCAGAGTTCTCTATGCATTCCATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGCAAACTGTAGCCCACCATACATGGAAGACATGGGAGTTTATTTAAGAACGAGAGGGTGGGAAAACTaGTATTTCTGTGTGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: VANCSPPYMEDMGVYLRTRGWEN*YFCVCH Trigger: GTGGCACACACAGAAATATCAGTTTTCCCACCCTCT...CGTTCTTAAATAAACTCCCATGTCTTCCATGTATGGTGGGCTACAGTTTGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175648.2 ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCATGCCTGTGCTTGGACAGTTGGTGGCTGGGGAAATCATCTTACTTTGCTTATAGAGACAGCAGAGTaGTCCTTTAAAATGTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: QHACAWTVGGWGNHLTLLIETAE*SFKMLA Trigger: AGCTAACATTTTAAAGGACCACTCTGCTGTCTCTAT...AAGCAAAGTAAGATGATTTCCCCAGCCACCAACTGTCCAAGCACAGGCATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAACCCAGGTCCTCTGCAAGAGCAACACGTATTCTTAACTGCTGAGTTCTCTGCCAAGTATTGGCTTTaGAAGATCCTTTGCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LNPGPLQEQHVFLTAEFSAKYWL*KILCKE Trigger: TTCTTTGCAAAGGATCTTCCAAAGCCAATACTTGGC...AGAGAACTCAGCAGTTAAGAATACGTGTTGCTCTTGCAGAGGACCTGGGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCCTTACAGTGAATGGACTATTGATGTCTTCAGTATTTGGGGGCAGAATCTTAGGGTTTTACAACTaGTTGGTGAGGAGGTTTACC | + |
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Preference number: 2 (lower is better) Translates to: PVLTVNGLLMSSVFGGRILGFYN*LVRRFT Trigger: GGTAAACCTCCTCACCAAGCAGTTGTAAAACCCTAA...GATTCTGCCCCCAAATACTGAAGACATCAATAGTCCATTCACTGTAAGGACAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCCTTACAGTGAATGGACTATTGATGTCTTCAGTATTTGGGGGCAGAATCGTAGCCCACCATACATaGAAGACATGGGAGTTTATT | + |
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Preference number: 2 (lower is better) Translates to: PVLTVNGLLMSSVFGGRIVAHHT*KTWEFI Trigger: AATAAACTCCCATGTCTTCCATGTATGGTGGGCTAC...GATTCTGCCCCCAAATACTGAAGACATCAATAGTCCATTCACTGTAAGGACAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCCTTACAGTGAATGGACTATTGATGTCTTCAGTATTTGGGGGCAGAATCAGGGGACTTATTTCATaGACTAGCACTTTTATAGGC | + |
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Preference number: 2 (lower is better) Translates to: PVLTVNGLLMSSVFGGRIRGLIS*TSTFIG Trigger: GCCTATAAAAGTGCTAGTGCATGAAATAAGTCCCCT...GATTCTGCCCCCAAATACTGAAGACATCAATAGTCCATTCACTGTAAGGACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCCTTACAGTGAATGGACTATTGATGTCTTCAGTATTTGGGGGCAGAATCGGGACAGTTGAAACTTaGCAAAAATCTGTGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PVLTVNGLLMSSVFGGRIGTVET*QKSVRR Trigger: TCTTCTCACAGATTTTTGGCAAGTTTCAACTGTCCC...GATTCTGCCCCCAAATACTGAAGACATCAATAGTCCATTCACTGTAAGGACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTCACTGGACTCACTTTCTATTCTTTCAAAAATGAAGGATTCTGGGGAATATGTAAACCACTAATGTaGGTGCTGGGGATTAAACTC | + |
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Preference number: 2 (lower is better) Translates to: QVTGLTFYSFKNEGFWGICKPLM*VLGIKL Trigger: GAGTTTAATCCCCAGCACCCACATTAGTGGTTTACA...TATTCCCCAGAATCCTTCATTTTTGAAAGAATAGAAAGTGAGTCCAGTGACTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTCACTGGACTCACTTTCTATTCTTTCAAAAATGAAGGATTCTGGGGAATAGAAAACAGGGACAGTTaGAACTTGCCAAAAATCTGT | + |
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Preference number: 2 (lower is better) Translates to: QVTGLTFYSFKNEGFWGIENRDS*NLPKIC Trigger: ACAGATTTTTGGCAAGTTTCAACTGTCCCTGTTTTC...TATTCCCCAGAATCCTTCATTTTTGAAAGAATAGAAAGTGAGTCCAGTGACTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTCACTGGACTCACTTTCTATTCTTTCAAAAATGAAGGATTCTGGGGAATAAAGCCAATCAAGGTCTaGAGTTTAGGGTTTTACAAC | + |
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Preference number: 2 (lower is better) Translates to: QVTGLTFYSFKNEGFWGIKPIKV*SLGFYN Trigger: GTTGTAAAACCCTAAACTCCAGACCTTGATTGGCTT...TATTCCCCAGAATCCTTCATTTTTGAAAGAATAGAAAGTGAGTCCAGTGACTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
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| 3UTR GCA 72 bp | GTCGGAAGATCACCCTGCGGCAGGTGTTTGACAGCCTaGACATGGACCCCTACGACCTCACGGTGGACTCGC | + |
|
Preference number: 3 (lower is better) Translates to: VGRSPCGRCLTA*TWTPTTSRWTR Trigger: GCGAGTCCACCGTGAGGTCGTAGGGGTCCATGTGCAGGCTGTCAAACACCTGCCGCAGGGTGATCTTCCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
||
| 3UTR TCA 72 bp | GAAGCTAGGTCGGAAGATCACCCTGCGGCAGGTGTTTaGCAGCCTGCACATGGACCCCTACGACCTCACGGT | + |
|
Preference number: 3 (lower is better) Translates to: EARSEDHPAAGV*QPAHGPLRPHG Trigger: ACCGTGAGGTCGTAGGGGTCCATGTGCAGGCTGTCAAACACCTGCCGCAGGGTGATCTTCCGACCTAGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
||
| 3UTR TCA 72 bp | CCCAGGCTATCCTTGAACTCACTCTGTGATGGAGGATaGCCTGGGCCTTCTGGTCTTCCTGCTTCCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PRLSLNSLCDGG*PGPSGLPASSS Trigger: AGAGGAGGAAGCAGGAAGACCAGAAGGCCCAGGTCATCCTCCATCACAGAGTGAGTTCAAGGATAGCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| 3UTR GCA 72 bp | CCCCTACGACCTCACGGTGGACTCGCTGGATGTTCATaGAGTAAGCTAGCTCTGCCCTGGGTACTTCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: PLRPHGGLAGCS*SKLALPWVLLS Trigger: TGATAGAAGTACCCAGGGCAGAGCTAGCTTACTGCATGAACATCCAGCGAGTCCACCGTGAGGTCGTAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
||
| 3UTR GCA 72 bp | ACAACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTaGTTAGCCATTTGGTGTCACTGCCCTGTCCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: TTALCLPACSAD*LAIWCHCPVLT Trigger: TGTAAGGACAGGGCAGTGACACCAAATGGCTAAGCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR CCA 72 bp | GGCCTTCTGGTCTTCCTGCTTCCTCCTCTCAAGTGCTaGGGTAGGAGGGGTGCACCAGCATCACTGTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GLLVFLLPPLKC*GRRGAPASLFL Trigger: TAAAAACAGTGATGCTGGTGCACCCCTCCTACCCCAGCACTTGAGAGGAGGAAGCAGGAAGACCAGAAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| 3UTR CCA 72 bp | TGCTTGCCCGCATGCTCGGCAGACTGCTTAGCCATTTaGTGTCACTGCCCTGTCCTTACAGTGAATGGACTA | + |
|
Preference number: 3 (lower is better) Translates to: CLPACSADCLAI*CHCPVLTVNGL Trigger: TAGTCCATTCACTGTAAGGACAGGGCAGTGACACCAAATGGCTAAGCAGTCTGCCGAGCATGCGGGCAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR TCA 72 bp | CTGCCTGCATGTACGTATGTGCACCACATGTATGCCTaGTGCCAGAGAGGCTTGGAAGAGGCCATTGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: LPACTYVHHMYA*CQRGLEEAIGF Trigger: GAATCCAATGGCCTCTTCCAAGCCTCTCTGGCATCAGGCATACATGTGGTGCACATACGTACATGCAGGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
||
| 3UTR GCA 72 bp | TGTTCTGCCTGCATGTACGTATGTGCACCACATGTATaGCTGATGCCAGAGAGGCTTGGAAGAGGCCATTGG | + |
|
Preference number: 3 (lower is better) Translates to: CSACMYVCAPHV*LMPERLGRGHW Trigger: CCAATGGCCTCTTCCAAGCCTCTCTGGCATCAGGCATACATGTGGTGCACATACGTACATGCAGGCAGAACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
||
| 3UTR CCA 72 bp | CTCGCTGGATGTTCATGCAGTAAGCTAGCTCTGCCCTaGGTACTTCTATCAGGAGTGCTCTGTCCACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LAGCSCSKLALP*VLLSGVLCPQK Trigger: CTTCTGTGGACAGAGCACTCCTGATAGAAGTACCCAGGGCAGAGCTAGCTTACTGCATGAACATCCAGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTTCCAGGTAGACACACACATTCATGCAGCGGCCTGCATGAATCAGAAGCACCTGTGCTTGGACAGTaGGTGGCTGGGGAAATCATC | + |
|
Preference number: 3 (lower is better) Translates to: CVPGRHTHSCSGLHESEAPVLGQ*VAGEII Trigger: GATGATTTCCCCAGCCACCAACTGTCCAAGCACAGG...TGCTTCTGATTCATGCAGGCCGCTGCATGAATGTGTGTGTCTACCTGGAACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGATGCCTGAATAGTGCAAACATCAGGAAGCAATaGGGCCACAGTACTGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLRPHSCHGSLSRCLNSANIRKQ*GHSTEG Trigger: TCCTTCAGTACTGTGGCCCAATTGCTTCCTGATGTT...TGCACTATTCAGGCATCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR TCA 72 bp | CTATCCAGGTCCGGGGATGCCTTTCTAAAGCAGCCATaGAGATCCCTCCGGTACAGTCCATTTTCGAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: LSRSGDAFLKQP*RSLRYSPFSRQ Trigger: TTGTCTCGAAAATGGACTGTACCGGAGGGATCTTCATGGCTGCTTTAGAAAGGCATCCCCGGACCTGGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR CCA 72 bp | AGAAGCCAGCATGCCTGTGCTTGGACAGTTGGTGGCTaGGGAAATCATCTTACTTTGCTTGTAGTAGAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: RSQHACAWTVGG*GNHLTLLVVEP Trigger: CGGCTCTACTACAAGCAAAGTAAGATGATTTCCCCAGCCACCAACTGTCCAAGCACAGGCATGCTGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTATGACAGACAACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTGCTTAGCACAGTGAATGGACTATaGATGTCTTCAGTATTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GMTDNSTVLARMLGRLLSTVNGL*MSSVFG Trigger: CCCAAATACTGAAGACATCAATAGTCCATTCACTGT...GCTAAGCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGTTGTCTGTCATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR TCA 72 bp | GGCCGCACTCCTGTCACGGTTCTCTCTCTAGATGCCTaGATAGTGCAGAGAAATGGGAAGAAAGCCAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: GRTPVTVLSLDA*IVQRNGKKANQ Trigger: TTGATTGGCTTTCTTCCCATTTCTCTGCACTATTCAGGCATCTAGAGAGAGAACCGTGACAGGAGTGCGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR GCA 72 bp | GCATGCTCGGCAGACTGCTTAGCCATTTGGTGTCACTaGCCTGTCCTTACAGTGAATGGACTATTGATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ACSADCLAIWCH*PVLTVNGLLMS Trigger: AGACATCAATAGTCCATTCACTGTAAGGACAGGGCAGTGACACCAAATGGCTAAGCAGTCTGCCGAGCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR CCA 72 bp | CCTTGGAGAGATACAGGTGGTTGTAAACCACTAATGTaGGTGCTGGGGATTAAACTCTGGTCCTCTGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PWRDTGGCKPLM*VLGIKLWSSAR Trigger: TCTTGCAGAGGACCAGAGTTTAATCCCCAGCACCCACATTAGTGGTTTACAACCACCTGTATCTCTCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| 3UTR TCA 72 bp | ACAAGGGGGCAGAGCACACACACCTCAGGTTCCAACTaGGACATTAGTTTCAGTCATTTATCTCAGATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TRGQSTHTSGSN*DISFSHLSQMA Trigger: AGCCATCTGAGATAAATGACTGAAACTAATGTCTCAGTTGGAACCTGAGGTGTGTGTGCTCTGCCCCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR CCA 72 bp | CTCAGAAAGGCGTCTTTACCTAAAATAAACGCTGTCTaGCTCAGGACTGGATGCCTCTGTGGAATCTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LRKASLPKINAV*LRTGCLCGIWK Trigger: TTTCCAGATTCCACAGAGGCATCCAGTCCTGAGCCAGACAGCGTTTATTTTAGGTAAAGACGCCTTTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR CCA 72 bp | GAGGGGTGCACCAGCATCACTGTTTTTACGCAGTGCTaGGATGGAACCCAGGCTTTATATATATTAGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: EGCTSITVFTQC*DGTQALYILGK Trigger: CTTACCTAATATATATAAAGCCTGGGTTCCATCCCAGCACTGCGTAAAAACAGTGATGCTGGTGCACCCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| 3UTR TCA 72 bp | CCTACTAAAAAGATGCCAGAACAGTCCCTCCCTCCCTaGAAAGCAGTAGTGTCAAGTATTGCTGCTATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PTKKMPEQSLPP*KAVVSSIAAIC Trigger: ACAGATAGCAGCAATACTTGACACTACTGCTTTTCAGGGAGGGAGGGACTGTTCTGGCATCTTTTTAGTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR GCA 72 bp | GTCACCACCCAGTTCAATGGAATGCATAGAGAACTCTaGTTACTACTTGATAAGGCAGTTGGAGACACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VTTQFNGMHREL*LLLDKAVGDTD Trigger: GTCAGTGTCTCCAACTGCCTTATCAAGTAGTAAGCAGAGTTCTCTATGCATTCCATTGAACTGGGTGGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTCACTGGACTCACTTTCTATTCTTTCAAAAATGAAGGATTCTGGGGAATAGGTCAGATGAGGGTGTaGGAGCCCTTGGAGAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: QVTGLTFYSFKNEGFWGIGQMRV*EPLERY Trigger: GTATCTCTCCAAGGGCTCCAACACCCTCATCTGACC...TATTCCCCAGAATCCTTCATTTTTGAAAGAATAGAAAGTGAGTCCAGTGACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| 3UTR TCA 72 bp | CCAACGTTTCCAGCATTTGAGCCAACCTGCTGTTACTaGGTGAGCACAGCACTAACATACAATTTACAACAA | + |
|
Preference number: 3 (lower is better) Translates to: PTFPAFEPTCCY*VSTALTYNLQQ Trigger: TTGTTGTAAATTGTATGTTAGTGCTGTGCTCACTCAGTAACAGCAGGTTGGCTCAAATGCTGGAAACGTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| 3UTR GCA 72 bp | ACAATTTACAACAATTCCCTAAAGCAGGAGGCAATTTaGACATCACTGAAGGCACACAATTTCCTACCATGG | + |
|
Preference number: 3 (lower is better) Translates to: TIYNNSLKQEAI*TSLKAHNFLPW Trigger: CCATGGTAGGAAATTGTGTGCCTTCAGTGATGTGCAAATTGCCTCCTGCTTTAGGGAATTGTTGTAAATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| 3UTR GCA 72 bp | TTACCTAAAATAAACGCTGTCTGGCTCAGGACTGGATaGCTCTGTGGAATCTGGAAATATAAAATGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LPKINAVWLRTG*LCGIWKYKMCV Trigger: AACACACATTTTATATTTCCAGATTCCACAGAGGCATCCAGTCCTGAGCCAGACAGCGTTTATTTTAGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR CCA 72 bp | CTGAATGATGGTGCAGTTGCTATAGAGACAGCAGAGTaGTCCTTTAAAATGTTAGCTGTAGAATTCCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: LNDGAVAIETAE*SFKMLAVEFHR Trigger: TCTATGGAATTCTACAGCTAACATTTTAAAGGACCACTCTGCTGTCTCTATAGCAACTGCACCATCATTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
||
| 3UTR TCA 72 bp | TCAAGTCACTGGACTCACTTTCTATTCTTTCAAAAATaGAGGATTCTGGGGAATAGAGGTATTGGCTATTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSHWTHFLFFQK*RILGNRGIGYC Trigger: GCAATAGCCAATACCTCTATTCCCCAGAATCCTTCATTTTTGAAAGAATAGAAAGTGAGTCCAGTGACTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| 3UTR GCA 72 bp | ACATCTATACTTAGGAAAACAGGGACAGTTGAAACTTaGCAAAAATCTGTGAGAAGACTTCTATGGAACGCT | + |
|
Preference number: 3 (lower is better) Translates to: TSILRKTGTVET*QKSVRRLLWNA Trigger: AGCGTTCCATAGAAGTCTTCTCACAGATTTTTGGCAAGTTTCAACTGTCCCTGTTTTCCTAAGTATAGATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| 3UTR TCA 72 bp | CAGGCTTTATATATATTAGGTAAGCACTCTACCAACTaGGTTACACCTCTAGCCCTGAATTGTTATTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: QALYILGKHSTN*VTPLALNCYYF Trigger: AAAATAATAACAATTCAGGGCTAGAGGTGTAACTCAGTTGGTAGAGTGCTTACCTAATATATATAAAGCCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCACTGTGGCTGTCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGACAGCTCGCCCGTCCATaGAGATACAACACTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPLWLSLRPHSCHGSLSRQLARP*RYNTPP Trigger: AGGAGGAGTGTTGTATCTGCATGGACGGGCGAGCTG...TCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS-3UTR GCA 90 bp | TCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGATGCCTGAATAGTGCACAGCTCGCCCGTCCATaGAGATACAACACTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRPHSCHGSLSRCLNSAQLARP*RYNTPP Trigger: AGGAGGAGTGTTGTATCTGCATGGACGGGCGAGCTG...TGCACTATTCAGGCATCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCACTGTGGCTGTCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGAAGAAGATGCTTTTCCTaGCCAGCAGCCACCTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPLWLSLRPHSCHGSLSRRRCFS*PAATLA Trigger: TGCTAAGGTGGCTGCTGGCCAGGAAAAGCATCTTCT...TCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCACTGTGGCTGTCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGATCTGTAGGCGACAAATaGGGCAGTTCCTGTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPLWLSLRPHSCHGSLSRSVGDK*GSSCVD Trigger: ATCGACACAGGAACTGCCCCATTTGTCGCCTACAGA...TCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR TCA 90 bp | GGTATGACAGACAACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTGCTTAGCATAACCAACTGCGTCTaGTCCGAAATTTGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GMTDNSTVLARMLGRLLSITNCV*SEICCP Trigger: GGGACAGCAAATTTCGGATCAGACGCAGTTGGTTAT...GCTAAGCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGTTGTCTGTCATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCACTGTGGCTGTCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGAATAACCAACTGCGTCTaGTCCGAAATTTGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KPLWLSLRPHSCHGSLSRITNCV*SEICCP Trigger: GGGACAGCAAATTTCGGATCAGACGCAGTTGGTTAT...TCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCACTGTGGCTGTCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGAATCCATAGACTAGCCTaGCAAGATGTGACCGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPLWLSLRPHSCHGSLSRIHRLA*QDVTED Trigger: ATCCTCGGTCACATCTTGCCAGGCTAGTCTATGGAT...TCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTGGCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS-3UTR CCA 90 bp | GGTATGACAGACAACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTGCTTAGCATCCATAGACTAGCCTaGCAAGATGTGACCGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GMTDNSTVLARMLGRLLSIHRLA*QDVTED Trigger: ATCCTCGGTCACATCTTGCCAGGCTAGTCTATGGAT...GCTAAGCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGTTGTCTGTCATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCACTGTGGCTGTCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGACAGCAGCTTGGCTTGTaGTGTCTTTATAGAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPLWLSLRPHSCHGSLSRQQLGL*CLYRAE Trigger: TTCAGCTCTATAAAGACATCACAAGCCAAGCTGCTG...TCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTCCTTACAGTGAATGGACTATTGATGTCTTCAGTATTTGGGGGCAGAATCCATGGCCTGTGGGGCTaGCCTGCCTCATCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PVLTVNGLLMSSVFGGRIHGLWG*PASSAM Trigger: CATGGCTGATGAGGCAGGCCAGCCCCACAGGCCATG...GATTCTGCCCCCAAATACTGAAGACATCAATAGTCCATTCACTGTAAGGACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAATTGGGCCACAGTACTGAAGGATCCATAATGAACCACAAGGGGGCAGAGCCATGTCATCTTCAGTaGGTGCATCTGACACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: KQLGHSTEGSIMNHKGAEPCHLQ*VHLTPP Trigger: GGGTGGTGTCAGATGCACCCACTGAAGATGACATGG...CTCTGCCCCCTTGTGGTTCATTATGGATCCTTCAGTACTGTGGCCCAATTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCAAACTGTAGCCCACCATACATGGAAGACATGGGAGTTTATTTAAGAACGCATGGCCTGTGGGGCTaGCCTGCCTCATCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VANCSPPYMEDMGVYLRTHGLWG*PASSAM Trigger: CATGGCTGATGAGGCAGGCCAGCCCCACAGGCCATG...CGTTCTTAAATAAACTCCCATGTCTTCCATGTATGGTGGGCTACAGTTTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175648.2 ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR CAA 72 bp | GCTTGGACAGTTGGTGGCTGGGGAAATCATCTTACTTaGCTTGTAGTAGAGCCGTGGAAGGAATCCGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AWTVGGWGNHLT*LVVEPWKESGG Trigger: ACCACCGGATTCCTTCCACGGCTCTACTACAAGCAAAGTAAGATGATTTCCCCAGCCACCAACTGTCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176210.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTCCTTACAGTGAATGGACTATTGATGTCTTCAGTATTTGGGGGCAGAATCCCTGTGGGGCTGGCCTaGCTCATCAGCCATGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVLTVNGLLMSSVFGGRIPVGLA*LISHVK Trigger: CTTAACATGGCTGATGAGGCAGGCCAGCCCCACAGG...GATTCTGCCCCCAAATACTGAAGACATCAATAGTCCATTCACTGTAAGGACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCTCTGCAAGAGCAACACGTATTCTTAACTGCTGAGTTCTCTCCAGTCCCCTTTCTCGAACCAAGGTaGCGTGCTTTGCTACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPLQEQHVFLTAEFSPVPFLEPR*RALLPF Trigger: AAAAGGTAGCAAAGCACGTCACCTTGGTTCGAGAAA...GGGGACTGGAGAGAACTCAGCAGTTAAGAATACGTGTTGCTCTTGCAGAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
||
| CDS-3UTR GCA 90 bp | GTAGCAAACTGTAGCCCACCATACATGGAAGACATGGGAGTTTATTTAAGAACGCCTGTGGGGCTGGCCTaGCTCATCAGCCATGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VANCSPPYMEDMGVYLRTPVGLA*LISHVK Trigger: CTTAACATGGCTGATGAGGCAGGCCAGCCCCACAGG...CGTTCTTAAATAAACTCCCATGTCTTCCATGTATGGTGGGCTACAGTTTGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175648.2 ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGCAACACGTATTCTTAACTGCTGAGTTCTCTCCAGTCCCCTTAGCACATAGAAGATGCTTTTCCTaGCCAGCAGCCACCTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QEQHVFLTAEFSPVPLAHRRCFS*PAATLA Trigger: TGCTAAGGTGGCTGCTGGCCAGGAAAAGCATCTTCT...ATGTGCTAAGGGGACTGGAGAGAACTCAGCAGTTAAGAATACGTGTTGCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
||
| CDS-3UTR CCA 90 bp | GCAAACTGTAGCCCACCATACATGGAAGACATGGGAGTTTATTTAAGAACGGGACCATGTCATCTTCAGTaGGTGCATCTGACACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: ANCSPPYMEDMGVYLRTGPCHLQ*VHLTPP Trigger: GGGTGGTGTCAGATGCACCCACTGAAGATGACATGG...TCCCGTTCTTAAATAAACTCCCATGTCTTCCATGTATGGTGGGCTACAGTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175648.2 ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCACCATACATGGAAGACATGGGAGTTTATTTAAGAACGGGACATACCAGATCTGTAGGCGACAAATaGGGCAGTTCCTGTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPPYMEDMGVYLRTGHTRSVGDK*GSSCVD Trigger: ATCGACACAGGAACTGCCCCATTTGTCGCCTACAGA...TCTGGTATGTCCCGTTCTTAAATAAACTCCCATGTCTTCCATGTATGGTGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175648.2 ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGTTGTAAACCACTAATGTGGGTGCTGGGGATTAAACTCTGGTCCTCTGCACACTCCATTTATCAATaGACTTCTGACAGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGCKPLMWVLGIKLWSSAHSIYQ*TSDRSC Trigger: ACAGCTTCTGTCAGAAGTGCATTGATAAATGGAGTG...TGCAGAGGACCAGAGTTTAATCCCCAGCACCCACATTAGTGGTTTACAACCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| 3UTR CAA 72 bp | TGGTGTCACTGCCCTGTCCTTACAGTGAATGGACTATaGATGTCTTCAGTATTTGGGGGCAGAATCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WCHCPVLTVNGL*MSSVFGGRIKS Trigger: TGACTTGATTCTGCCCCCAAATACTGAAGACATCAATAGTCCATTCACTGTAAGGACAGGGCAGTGACACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTCACTGGACTCACTTTCTATTCTTTCAAAAATGAAGGATTCTGGGGAATACAGCTCGCCCGTCCATaGAGATACAACACTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVTGLTFYSFKNEGFWGIQLARP*RYNTPP Trigger: AGGAGGAGTGTTGTATCTGCATGGACGGGCGAGCTG...TATTCCCCAGAATCCTTCATTTTTGAAAGAATAGAAAGTGAGTCCAGTGACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCTACAACTGTCAACACTCTAAAACTTAAACCTACTAAAAAGATGCCAGAACCTGTGGGGCTGGCCTaGCTCATCAGCCATGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: MATTVNTLKLKPTKKMPEPVGLA*LISHVK Trigger: CTTAACATGGCTGATGAGGCAGGCCAGCCCCACAGG...TTCTGGCATCTTTTTAGTAGGTTTAAGTTTTAGAGTGTTGACAGTTGTAGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| 3UTR CAA 72 bp | TGCATAGAGAACTCTGCTTACTACTTGATAAGGCAGTaGGAGACACTGACGCTTCACAGTAGACCAGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CIENSAYYLIRQ*ETLTLHSRPVS Trigger: ACTAACTGGTCTACTGTGAAGCGTCAGTGTCTCCAACTGCCTTATCAAGTAGTAAGCAGAGTTCTCTATGCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| CDS-3UTR TCA 90 bp | CATATCAGACTTCACTTTTTCTCAGCCAAGTATTGGCTTTGGAAGATCCTTTGCATAACCAACTGCGTCTaGTCCGAAATTTGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HIRLHFFSAKYWLWKILCITNCV*SEICCP Trigger: GGGACAGCAAATTTCGGATCAGACGCAGTTGGTTAT...GCAAAGGATCTTCCAAAGCCAATACTTGGCTGAGAAAAAGTGAAGTCTGATATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
||
| CDS-3UTR TCA 90 bp | GTAGCAAACTGTAGCCCACCATACATGGAAGACATGGGAGTTTATTTAAGAACGCAGCAGCTTGGCTTGTaGTGTCTTTATAGAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VANCSPPYMEDMGVYLRTQQLGL*CLYRAE Trigger: TTCAGCTCTATAAAGACATCACAAGCCAAGCTGCTG...CGTTCTTAAATAAACTCCCATGTCTTCCATGTATGGTGGGCTACAGTTTGCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTCACTGGACTCACTTTCTATTCTTTCAAAAATGAAGGATTCTGGGGAATACCATGTCATCTTCAGTaGGTGCATCTGACACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QVTGLTFYSFKNEGFWGIPCHLQ*VHLTPP Trigger: GGGTGGTGTCAGATGCACCCACTGAAGATGACATGG...TATTCCCCAGAATCCTTCATTTTTGAAAGAATAGAAAGTGAGTCCAGTGACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| 3UTR CAA 72 bp | AGTTCAATGGAATGCATAGAGAACTCTGCTTACTACTaGATAAGGCAGTTGGAGACACTGACGCTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSMECIENSAYY*IRQLETLTLHS Trigger: ACTGTGAAGCGTCAGTGTCTCCAACTGCCTTATCAAGTAGTAAGCAGAGTTCTCTATGCATTCCATTGAACT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCAAACTGTAGCCCACCATACATGGAAGACATGGGAGTTTATTTAAGAACGCACTCCATTTATCAATaGACTTCTGACAGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VANCSPPYMEDMGVYLRTHSIYQ*TSDRSC Trigger: ACAGCTTCTGTCAGAAGTGCATTGATAAATGGAGTG...CGTTCTTAAATAAACTCCCATGTCTTCCATGTATGGTGGGCTACAGTTTGCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCTACAACTGTCAACACTCTAAAACTTAAACCTACTAAAAAGATGCCAGAAAGAAGATGCTTTTCCTaGCCAGCAGCCACCTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MATTVNTLKLKPTKKMPERRCFS*PAATLA Trigger: TGCTAAGGTGGCTGCTGGCCAGGAAAAGCATCTTCT...TTCTGGCATCTTTTTAGTAGGTTTAAGTTTTAGAGTGTTGACAGTTGTAGCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTCACTGGACTCACTTTCTATTCTTTCAAAAATGAAGGATTCTGGGGAATATTTCTCGAACCAAGGTaGCGTGCTTTGCTACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVTGLTFYSFKNEGFWGIFLEPR*RALLPF Trigger: AAAAGGTAGCAAAGCACGTCACCTTGGTTCGAGAAA...TATTCCCCAGAATCCTTCATTTTTGAAAGAATAGAAAGTGAGTCCAGTGACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| CDS CCA 90 bp | TCCTCATCAGTCAGCTGCTTCACCCTGCCCATCCATAGACTAGCCTaGCAAGATGTGACCGAGGATGGGTTCTCATCAGGCTCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSVSCFTLPIHRLA*QDVTEDGFSSGSSE Trigger: CTCTGAAGAGCCTGATGAGAACCCATCCTCGGTCACATCTTGCCAGGCTAGTCTATGGATGGGCAGGGTGAAGCAGCTGACTGATGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106682.10 ENSMUST00000175981.8 ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCACTGTGGCTGTCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGAGGAGTCAGACCCAGGTaGTACCTCAAAGAGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KPLWLSLRPHSCHGSLSRGVRPR*YLKEKM Trigger: CATCTTCTCTTTGAGGTACAACCTGGGTCTGACTCC...TCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCACTGTGGCTGTCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGACCACCCATGATTCATTaGCTCCAGTCATCTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPLWLSLRPHSCHGSLSRPPMIH*LQSSVG Trigger: GCCTACAGATGACTGGAGCAAATGAATCATGGGTGG...TCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCACTGTGGCTGTCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGACTGCTTTTGTTAATCTaGGTACAGACCACCCGTACA | + |
|
Preference number: 5 (lower is better) Translates to: KPLWLSLRPHSCHGSLSRLLLLI*VQTTRT Trigger: TGTACGGGTGGTCTGTACCAAGATTAACAAAAGCAG...TCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS TCA 90 bp | ATTTATCAATGCACTTCTGACAGAAGCTGTGAGCACAGGGCAGGATaGGGTCAGCTCGCCCGTCCATGCAGATACAACACTCCTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IYQCTSDRSCEHRAG*GQLARPCRYNTPPH Trigger: ATGAGGAGGAGTGTTGTATCTGCATGGACGGGCGAGCTGACCTCATCCTGCCCTGTGCTCACAGCTTCTGTCAGAAGTGCATTGATAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106682.10 ENSMUST00000175981.8 ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS-3UTR CAA 90 bp | GGTATGACAGACAACAGCACTGTGCTTGCCCGCATGCTCGGCAGACTGCTTAGCACAATGCCACTGCTTTaGTTAATCTTGGTACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: GMTDNSTVLARMLGRLLSTMPLL*LILVQT Trigger: GGTCTGTACCAAGATTAACAAAAGCAGTGGCATTGT...GCTAAGCAGTCTGCCGAGCATGCGGGCAAGCACAGTGCTGTTGTCTGTCATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCACTGTGGCTGTCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGAACAATGCCACTGCTTTaGTTAATCTTGGTACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: KPLWLSLRPHSCHGSLSRTMPLL*LILVQT Trigger: GGTCTGTACCAAGATTAACAAAAGCAGTGGCATTGT...TCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCACTGTGGCTGTCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGAACCTTTTCTGGTAACTaGTTAATAACCAACTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KPLWLSLRPHSCHGSLSRTFSGN*LITNCV Trigger: GACGCAGTTGGTTATTAACAAGTTACCAGAAAAGGT...TCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGACAGCCACAGTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAATTGGGCCACAGTACTGAAGGATCCATAATGAACCACAAGGGGGCAGAGGGAGTCAGACCCAGGTaGTACCTCAAAGAGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KQLGHSTEGSIMNHKGAEGVRPR*YLKEKM Trigger: CATCTTCTCTTTGAGGTACAACCTGGGTCTGACTCC...CTCTGCCCCCTTGTGGTTCATTATGGATCCTTCAGTACTGTGGCCCAATTGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| CDS-3UTR CAA 90 bp | TCACTGAGGCCGCACTCCTGTCACGGTTCTCTCTCTAGATGCCTGAATAGTGCAACCTTTTCTGGTAACTaGTTAATAACCAACTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLRPHSCHGSLSRCLNSATFSGN*LITNCV Trigger: GACGCAGTTGGTTATTAACAAGTTACCAGAAAAGGT...TGCACTATTCAGGCATCTAGAGAGAGAACCGTGACAGGAGTGCGGCCTCAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| CDS CCA 90 bp | ACACCACCCATGATTCATTTGCTCCAGTCATCTGTAGGCGACAAATaGGGCAGTTCCTGTGTCGATCACTCCATTTATCAATGCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TPPMIHLLQSSVGDK*GSSCVDHSIYQCTS Trigger: AGAAGTGCATTGATAAATGGAGTGATCGACACAGGAACTGCCCCATTTGTCGCCTACAGATGACTGGAGCAAATGAATCATGGGTGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106682.10 ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| CDS CCA 90 bp | ACACCACCCATGATTCATTTGCTCCAGTCATCTGTAGGCGACAAATaGGGCAGTTCCTGTGTCGATCACATTTATCAATGCACTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TPPMIHLLQSSVGDK*GSSCVDHIYQCTSD Trigger: GTCAGAAGTGCATTGATAAATGTGATCGACACAGGAACTGCCCCATTTGTCGCCTACAGATGACTGGAGCAAATGAATCATGGGTGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175648.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCTCTGCAAGAGCAACACGTATTCTTAACTGCTGAGTTCTCTCCAGTCCCCACCTTTTCTGGTAACTaGTTAATAACCAACTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GPLQEQHVFLTAEFSPVPTFSGN*LITNCV Trigger: GACGCAGTTGGTTATTAACAAGTTACCAGAAAAGGT...GGGGACTGGAGAGAACTCAGCAGTTAAGAATACGTGTTGCTCTTGCAGAGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
||
| CDS-3UTR CAA 90 bp | GCAAACTGTAGCCCACCATACATGGAAGACATGGGAGTTTATTTAAGAACGGGACCACCCATGATTCATTaGCTCCAGTCATCTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ANCSPPYMEDMGVYLRTGPPMIH*LQSSVG Trigger: GCCTACAGATGACTGGAGCAAATGAATCATGGGTGG...TCCCGTTCTTAAATAAACTCCCATGTCTTCCATGTATGGTGGGCTACAGTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175648.2 ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS-3UTR CAA 90 bp | GTAGCAAACTGTAGCCCACCATACATGGAAGACATGGGAGTTTATTTAAGAACGCCACCCATGATTCATTaGCTCCAGTCATCTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VANCSPPYMEDMGVYLRTPPMIH*LQSSVG Trigger: GCCTACAGATGACTGGAGCAAATGAATCATGGGTGG...CGTTCTTAAATAAACTCCCATGTCTTCCATGTATGGTGGGCTACAGTTTGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175648.2 ENSMUST00000175981.8 ENSMUST00000177236.8 |
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| CDS-3UTR CAA 90 bp | CAAGAGCAACACGTATTCTTAACTGCTGAGTTCTCTCCAGTCCCCTTAGCACATTTAGCAGTTACATCATaGAGTTCAGCTACTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QEQHVFLTAEFSPVPLAHLAVTS*SSATLP Trigger: TGGGAGAGTAGCTGAACTCAATGATGTAACTGCTAA...ATGTGCTAAGGGGACTGGAGAGAACTCAGCAGTTAAGAATACGTGTTGCTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
||
| CDS-3UTR CAA 90 bp | CATATCAGACTTCACTTTTTCTCAGCCAAGTATTGGCTTTGGAAGATCCTTTGCGGAGTCAGACCCAGGTaGTACCTCAAAGAGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: HIRLHFFSAKYWLWKILCGVRPR*YLKEKM Trigger: CATCTTCTCTTTGAGGTACAACCTGGGTCTGACTCC...GCAAAGGATCTTCCAAAGCCAATACTTGGCTGAGAAAAAGTGAAGTCTGATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176716.3 |
||
| CDS-3UTR CAA 90 bp | GTAGCAAACTGTAGCCCACCATACATGGAAGACATGGGAGTTTATTTAAGAACGTTAGCAGTTACATCATaGAGTTCAGCTACTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VANCSPPYMEDMGVYLRTLAVTS*SSATLP Trigger: TGGGAGAGTAGCTGAACTCAATGATGTAACTGCTAA...CGTTCTTAAATAAACTCCCATGTCTTCCATGTATGGTGGGCTACAGTTTGCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177236.8 |
||
| CDS TCA 72 bp | TGCACTTCTGACAGAAGCTGTGAGCACAGGGCAGGATaGGGTCAGCTCGCCCGTCCATGCAGATACAACACT | + |
|
Preference number: 6 (lower is better) Translates to: CTSDRSCEHRAG*GQLARPCRYNT Trigger: AGTGTTGTATCTGCATGGACGGGCGAGCTGACCTCATCCTGCCCTGTGCTCACAGCTTCTGTCAGAAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106682.10 ENSMUST00000175981.8 ENSMUST00000176210.2 ENSMUST00000177236.8 ENSMUST00000177462.8 |
||
| CDS CAA 90 bp | CCATGTCATCTTCAGTGGGTGCATCTGACACCACCCATGATTCATTaGCTCCAGTCATCTGTAGGCGACAAATGGGGCAGTTCCTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PCHLQWVHLTPPMIH*LQSSVGDKWGSSCV Trigger: GACACAGGAACTGCCCCATTTGTCGCCTACAGATGACTGGAGCAAATGAATCATGGGTGGTGTCAGATGCACCCACTGAAGATGACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106682.10 ENSMUST00000175648.2 ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS GCA 72 bp | TGGGGCAGTTCCTGTGTCGATCACTCCATTTATCAATaGACTTCTGACAGAAGCTGTGAGCACAGGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WGSSCVDHSIYQ*TSDRSCEHRAG Trigger: TCCTGCCCTGTGCTCACAGCTTCTGTCAGAAGTGCATTGATAAATGGAGTGATCGACACAGGAACTGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106682.10 ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS CAA 72 bp | CTTCAGTGGGTGCATCTGACACCACCCATGATTCATTaGCTCCAGTCATCTGTAGGCGACAAATGGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LQWVHLTPPMIH*LQSSVGDKWGS Trigger: ACTGCCCCATTTGTCGCCTACAGATGACTGGAGCAAATGAATCATGGGTGGTGTCAGATGCACCCACTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106682.10 ENSMUST00000175648.2 ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS CCA 72 bp | ATGATTCATTTGCTCCAGTCATCTGTAGGCGACAAATaGGGCAGTTCCTGTGTCGATCACTCCATTTATCAA | + |
|
Preference number: 6 (lower is better) Translates to: MIHLLQSSVGDK*GSSCVDHSIYQ Trigger: TTGATAAATGGAGTGATCGACACAGGAACTGCCCCATTTGTCGCCTACAGATGACTGGAGCAAATGAATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106682.10 ENSMUST00000175981.8 ENSMUST00000177236.8 |
||
| CDS CCA 72 bp | ATGATTCATTTGCTCCAGTCATCTGTAGGCGACAAATaGGGCAGTTCCTGTGTCGATCACATTTATCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: MIHLLQSSVGDK*GSSCVDHIYQC Trigger: GCATTGATAAATGTGATCGACACAGGAACTGCCCCATTTGTCGCCTACAGATGACTGGAGCAAATGAATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175648.2 |
||
| CDS GCA 72 bp | GAGCTGAATAAACTGGTACAAATTCATGATCCGCGATaGTTCCACAATGCCACTGCTTTTGTTAATCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ELNKLVQIHDPR*FHNATAFVNLG Trigger: ACCAAGATTAACAAAAGCAGTGGCATTGTGGAAGCATCGCGGATCATGAATTTGTACCAGTTTATTCAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106682.10 ENSMUST00000177236.8 ENSMUST00000177462.8 |
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