Pregenerated sensors for RNF14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060450Ensembl transcript IDs: ENSMUST00000072376.13, ENSMUST00000170811.8, ENSMUST00000171461.3, ENSMUST00000236116.2, ENSMUST00000236649.2, ENSMUST00000237667.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTaGGCAGTGTACAGAGAATGGATCAGGCTCCCAGGACAGTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: LVSYRAQAPPQHGWE*AVYREWIRLPGQCG Trigger: GCCACACTGTCCTGGGAGCCTGATCCATTCTCTGTACACTGCTCACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
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| 3UTR CCA 90 bp | GCAGAGAGCTGTGTTCTCTTCCCCCACACCCTCCTGTTCCTCTTTTaGATTAACTGTACTTCCTATAATAAATCTGAGTTGGTGACAGCC | + |
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Preference number: 1 (lower is better) Translates to: AESCVLFPHTLLFLF*INCTSYNKSELVTA Trigger: GGCTGTCACCAACTCAGATTTATTATAGGAAGTACAGTTAATCCAAAAGAGGAACAGGAGGGTGTGGGGGAAGAGAACACAGCTCTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237667.2 |
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| 3UTR CCA 90 bp | ATTGTGGCACTAAAAATACTTTTAATGTACTATAGACTTCTATTCTaGCAAGCACTAGAACAGAACGACACTGGGACAACTGGTCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: IVALKILLMYYRLLF*QALEQNDTGTTGQL Trigger: TAACTGACCAGTTGTCCCAGTGTCGTTCTGTTCTAGTGCTTGCCAGAATAGAAGTCTATAGTACATTAAAAGTATTTTTAGTGCCACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | ACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGAGTGTGGCTGGGGCTGTaGCTGTCCCCAGCTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: TTLGQLVSYRAQAPPQHGVWLGL*LSPAEG Trigger: TCCCTCAGCTGGGGACAGTCACAGCCCCAGCCACAC...TCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTCCCACACCAAGCTCTGTGCTGGAAGAGGCCTGGGCTGTTGCCCTTCTCCAAACAGCACCACTCTaGCTCGGTGTTCTTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: APPTPSSVLEEAWAVALLQTAPL*LGVLPT Trigger: TGTGGGAAGAACACCGAGGCAGAGTGGTGCTGTTTG...GAGAAGGGCAACAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTGTGGGAGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237667.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGCACCAAGCTCTGTGCTaGAAGAGGCCTGGGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LGQLVSYRAQAPPQHGWEHQALC*KRPGLL Trigger: CAACAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTG...CTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | GACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGCTGAGGGATGGAACTaGGAGTGCTCCAACAACGTG | + |
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Preference number: 2 (lower is better) Translates to: DTGTTGQLQSTGSSTARMAEGWN*ECSNNV Trigger: CACGTTGTTGGAGCACTCTCAGTTCCATCCCTCAGC...CATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | AACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGGCTGAGGGATGGAACTaGGAGTGCTCCAACAACGTG | + |
|
Preference number: 2 (lower is better) Translates to: NDTGTTGQLQSTGSSTARAEGWN*ECSNNV Trigger: CACGTTGTTGGAGCACTCTCAGTTCCATCCCTCAGC...CCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGACAGCACGGATGGGAGTaGGCAGTGTACAGAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: TGTTGQLQSTGSSTARMGQHGWE*AVYREW Trigger: CCATTCTCTGTACACTGCTCACTCCCATCCGTGCTG...TCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGTTGCAGCCGTCTAATTTCTGTATGGGTGTGCCACAGCAGGGGCAGCTCTCCACACCAAGCTCTGTaGTGGAAGAGGCCTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SCCSRLISVWVCHSRGSSPHQAL*WKRPGL Trigger: CAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTGTGG...AGAGCTGCCCCTGCTGTGGCACACCCATACAGAAATTAGACGGCTGCAACAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGGCAAGCACTAGAACAGAACGACACTGGGACAACTGGTCAGTTACAGAGGTGTGGCTGGGGCTGTaGCTGTCCCCAGCTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: ILASTRTERHWDNWSVTEVWLGL*LSPAEG Trigger: TCCCTCAGCTGGGGACAGTCACAGCCCCAGCCACAC...CTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGTTCTAGTGCTTGCCAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGCAGTGTACAGAGAATaGATCAGGCTCCCAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: TLGQLVSYRAQAPPQHGWAVYRE*IRLPGQ Trigger: CTGTCCTGGGAGCCTGATCCATTCTCTGTACACTGC...CCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | ACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGAGCAGTGTACAGAGAATaGATCAGGCTCCCAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: TTLGQLVSYRAQAPPQHGAVYRE*IRLPGQ Trigger: CTGTCCTGGGAGCCTGATCCATTCTCTGTACACTGC...TCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | AACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGCTTGCCCACAAGAGGTaGGAGGCAAAGGGAGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: NDTGTTGQLQSTGSSTARLAHKR*EAKGES Trigger: ACTTTCTCCCTTTGCCTCCCACCTCTTGTGGGCAAG...CCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | AACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGCGTCTAATTTCTGTATaGGTGTGCCACAGCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: NDTGTTGQLQSTGSSTARRLISV*VCHSRG Trigger: GCCCCTGCTGTGGCACACCCATACAGAAATTAGACG...CCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTGTTGCAGCCGTCTAATTTCTGTATGGGTGTGCCACAGCAGGGGCAGCTCTGCTGAGGGATGGAACTaGGAGTGCTCCAACAACGTG | + |
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Preference number: 2 (lower is better) Translates to: SCCSRLISVWVCHSRGSSAEGWN*ECSNNV Trigger: CACGTTGTTGGAGCACTCTCAGTTCCATCCCTCAGC...AGAGCTGCCCCTGCTGTGGCACACCCATACAGAAATTAGACGGCTGCAACAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAAGCTCTGTGCTGGAAGAGGCCTGGGCTGTTGCCCTTCTCTGAACTTTTTGGTTGTCTAGGTGCTTaGAGAGAGCAGAGAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: HQALCWKRPGLLPFSELFGCLGA*REQRAV Trigger: CACAGCTCTCTGCTCTCTGCAAGCACCTAGACAACC...AAAAAGTTCAGAGAAGGGCAACAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237667.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAAGCTCTGTGCTGGAAGAGGCCTGGGCTGTTGCCCTTCTCTGAACTTTTTCACAGGTTGTCTAGGTaGTTGCAGAGAGCAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: HQALCWKRPGLLPFSELFHRLSR*LQRAES Trigger: GCTCTCTGCTCTCTGCAAGCACCTAGACAACCTGTG...AAAAAGTTCAGAGAAGGGCAACAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237667.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGTTGCAGCCGTCTAATTTCTGTATGGGTGTGCCACAGCAGGGGCAGCTCTGCAGTGTACAGAGAATaGATCAGGCTCCCAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: SCCSRLISVWVCHSRGSSAVYRE*IRLPGQ Trigger: CTGTCCTGGGAGCCTGATCCATTCTCTGTACACTGC...AGAGCTGCCCCTGCTGTGGCACACCCATACAGAAATTAGACGGCTGCAACAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | AGACACACACTGCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGCAGCACGGATGGGAGTaGGCAGTGTACAGAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: RHTLLGSTLKLSLPTRGGQHGWE*AVYREW Trigger: CCATTCTCTGTACACTGCTCACTCCCATCCGTGCTG...CCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGCAGTGTGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGAGGCAAAGGGAGCAGTGTACAGAGAATaGATCAGGCTCCCAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: AGINIKTVLAHKRWEAKGAVYRE*IRLPGQ Trigger: CTGTCCTGGGAGCCTGATCCATTCTCTGTACACTGC...TCCCTTTGCCTCCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTCCCACACCAAGCTCTGTGCTGGAAGAGGCCTGGGCTGTTGCCCTTCTCCTCCTGTTCCTCTTTTaGATTAACTGTACTTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: APPTPSSVLEEAWAVALLLLFLF*INCTSY Trigger: ATAGGAAGTACAGTTAATCCAAAAGAGGAACAGGAG...GAGAAGGGCAACAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTGTGGGAGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237667.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATGCTCTTCACAGGTTTAGAGAGCATTCATGAGGAATACACTGGGCTTTTTGTGTGGCTGGGGCTGTaGCTGTCCCCAGCTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: MMLFTGLESIHEEYTGLFVWLGL*LSPAEG Trigger: TCCCTCAGCTGGGGACAGTCACAGCCCCAGCCACAC...AAAAAGCCCAGTGTATTCCTCATGAATGCTCTCTAAACCTGTGAAGAGCATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTGCCATACCTCTGTTCCAAGAACCTCTTAGTAGCTTCATCTGCTTGTAGGAGGGAGCTGGCAGCATaGACGGGGACAATACACCAC | + |
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Preference number: 2 (lower is better) Translates to: LLPYLCSKNLLVASSACRRELAA*TGTIHH Trigger: GTGGTGTATTGTCCCCGTCCATGCTGCCAGCTCCCT...CCTACAAGCAGATGAAGCTACTAAGAGGTTCTTGGAACAGAGGTATGGCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACAATCCAGAAGCAGTCTGAGCTGACAGTTAAGCAATTCCTTAATTTTCAGGTGTGGCTGGGGCTGTaGCTGTCCCCAGCTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LTIQKQSELTVKQFLNFQVWLGL*LSPAEG Trigger: TCCCTCAGCTGGGGACAGTCACAGCCCCAGCCACAC...CTGAAAATTAAGGAATTGCTTAACTGTCAGCTCAGACTGCTTCTGGATTGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAATGAACTAGTCGTCGTCGTCGTCTTCATCATCGTCGTCCTCCTCAATTTCGGGCAGACACAGCTCTaGCTCTGTATCTGGAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RNELVVVVVFIIVVLLNFGQTQL*LCIWRN Trigger: ATTCCTCCAGATACAGAGTCAGAGCTGTGTCTGCCC...GAAATTGAGGAGGACGACGATGATGAAGACGACGACGACGACTAGTTCATTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | AACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGTATAGACTTCTATTCTaGCAAGCACTAGAACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: NDTGTTGQLQSTGSSTARYRLLF*QALEQN Trigger: GTTCTGTTCTAGTGCTTGCCAGAATAGAAGTCTATA...CCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCCACCAAGTAACTACCAAGGCTGAGGGATGGAACTaGGAGTGCTCCAACAACGTG | + |
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Preference number: 2 (lower is better) Translates to: QATGELLSLQNIHQVTTKAEGWN*ECSNNV Trigger: CACGTTGTTGGAGCACTCTCAGTTCCATCCCTCAGC...CTTGGTAGTTACTTGGTGGATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATGCTCTTCACAGGTTTAGAGAGCATTCATGAGGAATACACTGGGCTTTTTCAGCACGGATGGGAGTaGGCAGTGTACAGAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: MMLFTGLESIHEEYTGLFQHGWE*AVYREW Trigger: CCATTCTCTGTACACTGCTCACTCCCATCCGTGCTG...AAAAAGCCCAGTGTATTCCTCATGAATGCTCTCTAAACCTGTGAAGAGCATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR GCA 90 bp | TTGACAATCCAGAAGCAGTCTGAGCTGACAGTTAAGCAATTCCTTAATTTTCAGGTACCACCAGGCTCTTaGATCACAGGGAGCTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LTIQKQSELTVKQFLNFQVPPGS*ITGSWQ Trigger: CTGCCAGCTCCCTGTGATGCAAGAGCCTGGTGGTAC...CTGAAAATTAAGGAATTGCTTAACTGTCAGCTCAGACTGCTTCTGGATTGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTCTAATTTCTGTATGGGTGTGCCACAGCAGGGGCAGCTCTTGGAGTTCTTCTATAGACTTCTATTCTaGCAAGCACTAGAACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: PSNFCMGVPQQGQLLEFFYRLLF*QALEQN Trigger: GTTCTGTTCTAGTGCTTGCCAGAATAGAAGTCTATA...GAAGAACTCCAAGAGCTGCCCCTGCTGTGGCACACCCATACAGAAATTAGACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCCACCAAGTAACTACCAAGCTTGCCCACAAGAGGTaGGAGGCAAAGGGAGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: QATGELLSLQNIHQVTTKLAHKR*EAKGES Trigger: ACTTTCTCCCTTTGCCTCCCACCTCTTGTGGGCAAG...CTTGGTAGTTACTTGGTGGATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACAATCCAGAAGCAGTCTGAGCTGACAGTTAAGCAATTCCTTAATTTTCAGGCTGAGGGATGGAACTaGGAGTGCTCCAACAACGTG | + |
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Preference number: 2 (lower is better) Translates to: LTIQKQSELTVKQFLNFQAEGWN*ECSNNV Trigger: CACGTTGTTGGAGCACTCTCAGTTCCATCCCTCAGC...CTGAAAATTAAGGAATTGCTTAACTGTCAGCTCAGACTGCTTCTGGATTGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | AGACACACACTGCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGTATCTGGAGGAATTCTaGGCCAGAATCCTAAATTCT | + |
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Preference number: 2 (lower is better) Translates to: RHTLLGSTLKLSLPTRGGYLEEF*ARILNS Trigger: AGAATTTAGGATTCTGGCTCAGAATTCCTCCAGATA...CCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGCAGTGTGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCAAGTAACTACCAAGCCACTTACCGAATCATGAAGAAGACAGTTTTTCAACTTGCCCACAAGAGGTaGGAGGCAAAGGGAGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: PPSNYQATYRIMKKTVFQLAHKR*EAKGES Trigger: ACTTTCTCCCTTTGCCTCCCACCTCTTGTGGGCAAG...TTGAAAAACTGTCTTCTTCATGATTCGGTAAGTGGCTTGGTAGTTACTTGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGAAAACACATGTTCACAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCGGGCAGACACAGCTCTaGCTCTGTATCTGGAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: VENTCSQATGELLSLQNIGQTQL*LCIWRN Trigger: ATTCCTCCAGATACAGAGTCAGAGCTGTGTCTGCCC...GATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTGTGAACATGTGTTTTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCCTTCTACCAGCTCTTTaGCCTGACCAGGAGTCGCCA | + |
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Preference number: 2 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLLLPAL*PDQESP Trigger: TGGCGACTCCTGGTCAGGTCAAAGAGCTGGTAGAAG...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCCACCAAGTAACTACCAAGAGAACAGAACGACACTaGGACAACTGGTCAGTTACA | + |
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Preference number: 2 (lower is better) Translates to: QATGELLSLQNIHQVTTKRTERH*DNWSVT Trigger: TGTAACTGACCAGTTGTCCCAGTGTCGTTCTGTTCT...CTTGGTAGTTACTTGGTGGATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACAATCCAGAAGCAGTCTGAGCTGACAGTTAAGCAATTCCTTAATTTTCAGTCCACAGTTTCTTCTTaGTCTACATCCGCCGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LTIQKQSELTVKQFLNFQSTVSS*STSAAA Trigger: TGCTGCGGCGGATGTAGACCAAGAAGAAACTGTGGA...CTGAAAATTAAGGAATTGCTTAACTGTCAGCTCAGACTGCTTCTGGATTGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCGGGCAGACACAGCTCTaGCTCTGTATCTGGAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLGQTQL*LCIWRN Trigger: ATTCCTCCAGATACAGAGTCAGAGCTGTGTCTGCCC...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCGCAGTGTACAGAGAATaGATCAGGCTCCCAGGACAG | + |
|
Preference number: 2 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLAVYRE*IRLPGQ Trigger: CTGTCCTGGGAGCCTGATCCATTCTCTGTACACTGC...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCCACCAAGTAACTACCAAGTATCTGGAGGAATTCTaGGCCAGAATCCTAAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: QATGELLSLQNIHQVTTKYLEEF*ARILNS Trigger: AGAATTTAGGATTCTGGCTCAGAATTCCTCCAGATA...CTTGGTAGTTACTTGGTGGATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCGCAAAGGGAGAAAGTTaGGAACACAATGGGGCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLAKGES*EHNGAD Trigger: GTCTGCCCCATTGTGTTCTCAACTTTCTCCCTTTGC...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| 3UTR-3UTR GCA 90 bp | ATACTTTTAATGTACTATAGACTTCTATTCTGGCAAGCACTAGAACAGAACGACGCGAGCAAACAAGTCTaGTTCTACCAGCTCTTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: ILLMYYRLLFWQALEQNDASKQV*FYQLFD Trigger: GTCAAAGAGCTGGTAGAAGCAGACTTGTTTGCTCGC...GTCGTTCTGTTCTAGTGCTTGCCAGAATAGAAGTCTATAGTACATTAAAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGAAAACACATGTTCACAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCTTTAGAGAGCATTCATaGGGAATACACTGGGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: VENTCSQATGELLSLQNIFREHS*GIHWAF Trigger: AAAAGCCCAGTGTATTCCTCATGAATGCTCTCTAAA...GATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTGTGAACATGTGTTTTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCAGAACAGAACGACACTaGGACAACTGGTCAGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLRTERH*DNWSVT Trigger: TGTAACTGACCAGTTGTCCCAGTGTCGTTCTGTTCT...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCGAGACATGCAGTTACCTTACATaGAGAAAGCCCGTGATAGGT | + |
|
Preference number: 2 (lower is better) Translates to: IKLRIRNPAIKLLLSLETCSYLT*RKPVIG Trigger: ACCTATCACGGGCTTTCTCCATGTAAGGTAACTGCA...TGTCTCGAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
||
| 3UTR-3UTR TCA 90 bp | GTAGAAAACACATGTTCACAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCCCACTTACCGAATCATaGAGAAGACAGTTTTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VENTCSQATGELLSLQNIPLTES*RRQFFK Trigger: TTTGAAAAACTGTCTTCTTCATGATTCGGTAAGTGG...GATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTGTGAACATGTGTTTTCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGACAATCCAGAAGCAGTCTGAGCTGACAGTTAAGCAATTCCTTAATTTTCAGTATAGACTTCTATTCTaGCAAGCACTAGAACAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LTIQKQSELTVKQFLNFQYRLLF*QALEQN Trigger: GTTCTGTTCTAGTGCTTGCCAGAATAGAAGTCTATA...CTGAAAATTAAGGAATTGCTTAACTGTCAGCTCAGACTGCTTCTGGATTGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCGAGACATTTAGAGAGCATTCATaGGGAATACACTGGGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: IKLRIRNPAIKLLLSLETFREHS*GIHWAF Trigger: AAAAGCCCAGTGTATTCCTCATGAATGCTCTCTAAA...TGTCTCGAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| 3UTR TCA 72 bp | AGGGGAAGGGAGGGAAGGAAGCCCAGTTGCTGTAGGTaGCTAGAGAGGACCCGAGGGTTCGGAAGGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RGREGRKPSCCR*LERTRGFGRSG Trigger: CCCTGACCTTCCGAACCCTCGGGTCCTCTCTAGTCACCTACAGCAACTGGGCTTCCTTCCCTCCCTTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| 3UTR TCA 72 bp | TACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTaGGCAGTGTACAGAGAATGGATCAGGCTCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YRAQAPPQHGWE*AVYREWIRLPG Trigger: TCCTGGGAGCCTGATCCATTCTCTGTACACTGCTCACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
||
| 3UTR-3UTR CAA 90 bp | AACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGACATTAAAACTGTCCTaGCCCACAAGAGGTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NDTGTTGQLQSTGSSTARTLKLS*PTRGGR Trigger: CCTCCCACCTCTTGTGGGCAAGGACAGTTTTAATGT...CCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCTCCCACACCAAGCTCTGTGCTGGAAGAGGCCTGGGCTGTTGCCCTTCTCTATAATAAATCTGAGTaGGTGACAGCCATTTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: APPTPSSVLEEAWAVALLYNKSE*VTAICH Trigger: GTGGCAAATGGCTGTCACCAACTCAGATTTATTATA...GAGAAGGGCAACAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTGTGGGAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237667.2 |
||
| 3UTR CCA 72 bp | ACTTCTATTCTGGCAAGCACTAGAACAGAACGACACTaGGACAACTGGTCAGTTACAGAGCACAGGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TSILASTRTERH*DNWSVTEHRLL Trigger: GAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGTTCTAGTGCTTGCCAGAATAGAAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAATGAACTAGTCGTCGTCGTCGTCTTCATCATCGTCGTCCTCCTCAATTTCGGCAAAGGGAGAAAGTaGAGAACACAATGGGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RNELVVVVVFIIVVLLNFGKGRK*RTQWGR Trigger: TCTGCCCCATTGTGTTCTCAACTTTCTCCCTTTGCC...GAAATTGAGGAGGACGACGATGATGAAGACGACGACGACGACTAGTTCATTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCCACCAAGTAACTACCAAGATCCACAGTTTCTTCTaGGTCTACATCCGCCGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QATGELLSLQNIHQVTTKIHSFF*VYIRRS Trigger: GCTGCGGCGGATGTAGACCAAGAAGAAACTGTGGAT...CTTGGTAGTTACTTGGTGGATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACACACACTGCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGAAGAACAGTTTACTATaGAAGCACTTCGTCTGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: RHTLLGSTLKLSLPTRGGKNSLL*KHFVCR Trigger: TCGGCAGACGAAGTGCTTCAATAGTAAACTGTTCTT...CCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGCAGTGTGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAATGAACTAGTCGTCGTCGTCGTCTTCATCATCGTCGTCCTCCTCAATTTCGTGCAAGTCATCTTGTaGCAGCCGTCTAATTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RNELVVVVVFIIVVLLNFVQVIL*QPSNFC Trigger: ACAGAAATTAGACGGCTGCAACAAGATGACTTGCAC...GAAATTGAGGAGGACGACGATGATGAAGACGACGACGACGACTAGTTCATTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGAAAACACATGTTCACAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCACATTAAAACTGTCCTaGCCCACAAGAGGTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VENTCSQATGELLSLQNITLKLS*PTRGGR Trigger: CCTCCCACCTCTTGTGGGCAAGGACAGTTTTAATGT...GATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTGTGAACATGTGTTTTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCGAGACACCAGTGCAAGTCATCTaGTTGCAGCCGTCTAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: IKLRIRNPAIKLLLSLETPVQVI*LQPSNF Trigger: GAAATTAGACGGCTGCAACAAGATGACTTGCACTGG...TGTCTCGAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
||
| 3UTR TCA 72 bp | TGTCAAAGTAGAAAACACATGTTCACAAGCTACAGGTaGATTACTGTCCCTTCAAAACATCCACCAAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: CQSRKHMFTSYR*ITVPSKHPPSN Trigger: GTTACTTGGTGGATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTGTGAACATGTGTTTTCTACTTTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
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| 3UTR CCA 72 bp | CTAAAAATACTTTTAATGTACTATAGACTTCTATTCTaGCAAGCACTAGAACAGAACGACACTGGGACAACT | + |
|
Preference number: 3 (lower is better) Translates to: LKILLMYYRLLF*QALEQNDTGTT Trigger: AGTTGTCCCAGTGTCGTTCTGTTCTAGTGCTTGCCAGAATAGAAGTCTATAGTACATTAAAAGTATTTTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
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| CDS-3UTR GCA 90 bp | CTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGCCACACCAAGCTCTGTaGTGGAAGAGGCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGQLVSYRAQAPPQHGWEPHQAL*WKRPGL Trigger: CAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTGTGG...CTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTACCACCAGGCTCTTaGATCACAGGGAGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGTTGQLQSTGSSTARMGVPPGS*ITGSWQ Trigger: CTGCCAGCTCCCTGTGATGCAAGAGCCTGGTGGTAC...TCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR GCA 90 bp | GACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGTACCACCAGGCTCTTaGATCACAGGGAGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTGTTGQLQSTGSSTARMVPPGS*ITGSWQ Trigger: CTGCCAGCTCCCTGTGATGCAAGAGCCTGGTGGTAC...CATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CCA 90 bp | TGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTTGCATCACAGGGAGCTaGCAGCATGGACGGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: WDNWSVTEHRLLHSTDGSCITGS*QHGRGQ Trigger: TTGTCCCCGTCCATGCTGCCAGCTCCCTGTGATGCA...ACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR TCA 90 bp | ACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGCTTCTACCAGCTCTTTaGCCTGACCAGGAGTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLGQLVSYRAQAPPQHGWLLPAL*PDQESP Trigger: TGGCGACTCCTGGTCAGGTCAAAGAGCTGGTAGAAG...CCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CCA 90 bp | ACAGAACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCAGGGAGCTGGCAGCATaGACGGGGACAATACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TERHWDNWSVTEHRLLHSRELAA*TGTIHH Trigger: GTGGTGTATTGTCCCCGTCCATGCTGCCAGCTCCCT...GCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CCA 90 bp | TGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTAGCAGGGGCAGCTCTTaGAGTTCTTCTCCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WDNWSVTEHRLLHSTDGSSRGSS*SSSPAS Trigger: ACTGGCTGGAGAAGAACTCCAAGAGCTGCCCCTGCT...ACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CCA 90 bp | ACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGAGCAGGGGCAGCTCTTaGAGTTCTTCTCCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLGQLVSYRAQAPPQHGWSRGSS*SSSPAS Trigger: ACTGGCTGGAGAAGAACTCCAAGAGCTGCCCCTGCT...CCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGACAGAGAGCAGAGAGCTaGGTTGGTGACAGCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGTTGQLQSTGSSTARMGQRAES*VGDSHL Trigger: CAAATGGCTGTCACCAACTCAGCTCTCTGCTCTCTG...TCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR TCA 90 bp | ACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGACAGAGAGCAGAGAGCTaGGTTGGTGACAGCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TTLGQLVSYRAQAPPQHGQRAES*VGDSHL Trigger: CAAATGGCTGTCACCAACTCAGCTCTCTGCTCTCTG...TCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCCTTCTACCAGCTCTTTaGCCTGACCAGGAGTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TERHWDNWSVTEHRLLHSLLPAL*PDQESP Trigger: TGGCGACTCCTGGTCAGGTCAAAGAGCTGGTAGAAG...GCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR GCA 90 bp | AACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGGGTTGTCTAGGTGCTTaGAGAGAGCAGAGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NDTGTTGQLQSTGSSTARGCLGA*REQRAE Trigger: CTCAGCTCTCTGCTCTCTGCAAGCACCTAGACAACC...CCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGGTTGTCTAGGTGCTTaGAGAGAGCAGAGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGTTGQLQSTGSSTARMGGCLGA*REQRAE Trigger: CTCAGCTCTCTGCTCTCTGCAAGCACCTAGACAACC...TCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGGTTGTCTAGGTGCTTaGAGAGAGCAGAGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLGQLVSYRAQAPPQHGWGCLGA*REQRAE Trigger: CTCAGCTCTCTGCTCTCTGCAAGCACCTAGACAACC...CCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGCAAACAGCACCACTCTaGCTCGGTGTTCTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TLGQLVSYRAQAPPQHGWQTAPL*LGVLPT Trigger: TGTGGGAAGAACACCGAGGCAGAGTGGTGCTGTTTG...CCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
||
| CDS-3UTR GCA 90 bp | TGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTCAAACAGCACCACTCTaGCTCGGTGTTCTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: WDNWSVTEHRLLHSTDGSQTAPL*LGVLPT Trigger: TGTGGGAAGAACACCGAGGCAGAGTGGTGCTGTTTG...ACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236116.2 ENSMUST00000236649.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGAGGCAAAGGGACCACACCAAGCTCTGTaGTGGAAGAGGCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGINIKTVLAHKRWEAKGPHQAL*WKRPGL Trigger: CAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTGTGG...TCCCTTTGCCTCCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR GCA 90 bp | ACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAATTTCTGTATGGGTGTaGCACAGCAGGGGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGTTGQLQSTGSSTARMGISVWV*HSRGSS Trigger: AGAGCTGCCCCTGCTGTGGCACACCCATACAGAAAT...TCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR GCA 90 bp | TGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTATTTCTGTATGGGTGTaGCACAGCAGGGGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WDNWSVTEHRLLHSTDGSISVWV*HSRGSS Trigger: AGAGCTGCCCCTGCTGTGGCACACCCATACAGAAAT...ACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTGAGCAGTGTACAGAGAATGCGTCTAATTTCTGTATaGGTGTGCCACAGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSTGSSTARMGVSSVQRMRLISV*VCHSRG Trigger: GCCCCTGCTGTGGCACACCCATACAGAAATTAGACG...CATTCTCTGTACACTGCTCACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCATTTCTGTATGGGTGTaGCACAGCAGGGGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TERHWDNWSVTEHRLLHSISVWV*HSRGSS Trigger: AGAGCTGCCCCTGCTGTGGCACACCCATACAGAAAT...GCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGAGGCAAAGGGACACCAAGCTCTGTGCTaGAAGAGGCCTGGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGINIKTVLAHKRWEAKGHQALC*KRPGLL Trigger: CAACAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTG...TCCCTTTGCCTCCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR CCA 90 bp | ACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGATCCACAGTTTCTTCTTaGTCTACATCCGCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGTTGQLQSTGSSTARMGSTVSS*STSAAA Trigger: TGCTGCGGCGGATGTAGACCAAGAAGAAACTGTGGA...TCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGTCCACAGTTTCTTCTTaGTCTACATCCGCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLGQLVSYRAQAPPQHGWSTVSS*STSAAA Trigger: TGCTGCGGCGGATGTAGACCAAGAAGAAACTGTGGA...CCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGAGGCAAAGGGAAGGGAGCTGGCAGCATaGACGGGGACAATACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGINIKTVLAHKRWEAKGRELAA*TGTIHH Trigger: GTGGTGTATTGTCCCCGTCCATGCTGCCAGCTCCCT...TCCCTTTGCCTCCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR GCA 90 bp | ACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGCGAGCAAACAAGTCTaGTTCTACCAGCTCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLGQLVSYRAQAPPQHGWASKQV*FYQLFD Trigger: GTCAAAGAGCTGGTAGAAGCAGACTTGTTTGCTCGC...CCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCGCGAGCAAACAAGTCTaGTTCTACCAGCTCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TERHWDNWSVTEHRLLHSASKQV*FYQLFD Trigger: GTCAAAGAGCTGGTAGAAGCAGACTTGTTTGCTCGC...GCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTGGCAAGCACTAGAACAGAACGACACTGGGACAACTGGTCAGTTACAGAGCACCAAGCTCTGTGCTaGAAGAGGCCTGGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILASTRTERHWDNWSVTEHQALC*KRPGLL Trigger: CAACAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTG...CTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGTTCTAGTGCTTGCCAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR GCA 90 bp | AGACACACACTGCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGCACAGGTTGTCTAGGTaGTTGCAGAGAGCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHTLLGSTLKLSLPTRGGHRLSR*LQRAES Trigger: GCTCTCTGCTCTCTGCAAGCACCTAGACAACCTGTG...CCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGCAGTGTGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| CDS-3UTR GCA 90 bp | AGACACACACTGCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGCAAACAGCACCACTCTaGCTCGGTGTTCTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RHTLLGSTLKLSLPTRGGQTAPL*LGVLPT Trigger: TGTGGGAAGAACACCGAGGCAGAGTGGTGCTGTTTG...CCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGCAGTGTGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGAGGCAAAGGGATCCACAGTTTCTTCTTaGTCTACATCCGCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGINIKTVLAHKRWEAKGSTVSS*STSAAA Trigger: TGCTGCGGCGGATGTAGACCAAGAAGAAACTGTGGA...TCCCTTTGCCTCCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR CCA 90 bp | ACAGAACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCTGCAGTTACCTTACATaGAGAAAGCCCGTGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TERHWDNWSVTEHRLLHSCSYLT*RKPVIG Trigger: ACCTATCACGGGCTTTCTCCATGTAAGGTAACTGCA...GCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTGGCAAGCACTAGAACAGAACGACACTGGGACAACTGGTCAGTTACAGAGAGCAGGGGCAGCTCTTaGAGTTCTTCTCCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILASTRTERHWDNWSVTESRGSS*SSSPAS Trigger: ACTGGCTGGAGAAGAACTCCAAGAGCTGCCCCTGCT...CTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGTTCTAGTGCTTGCCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTGAGCAGTGTACAGAGAATGGAGACTCAGAATCAGTaGAATGTCTGTAAGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSTGSSTARMGVSSVQRMETQNQ*NVCKDL Trigger: CAAATCCTTACAGACATTTCACTGATTCTGAGTCTC...CATTCTCTGTACACTGCTCACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CCA 90 bp | ACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGACAACCTGTTAAAGCATaGAGACTCAGAATCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TTLGQLVSYRAQAPPQHGQPVKA*RLRISE Trigger: TTCACTGATTCTGAGTCTCCATGCTTTAACAGGTTG...TCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCGAGACTCAGAATCAGTaGAATGTCTGTAAGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TERHWDNWSVTEHRLLHSETQNQ*NVCKDL Trigger: CAAATCCTTACAGACATTTCACTGATTCTGAGTCTC...GCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTGAGCAGTGTACAGAGAATGTCAAAGCCACTATTCTaGAGAGACTCATTTGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: QSTGSSTARMGVSSVQRMSKPLF*RDSFEL Trigger: CAATTCAAATGAGTCTCTCCAGAATAGTGGCTTTGA...CATTCTCTGTACACTGCTCACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCCACCAAGTAACTACCAAGTGCATCACAGGGAGCTaGCAGCATGGACGGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: QATGELLSLQNIHQVTTKCITGS*QHGRGQ Trigger: TTGTCCCCGTCCATGCTGCCAGCTCCCTGTGATGCA...CTTGGTAGTTACTTGGTGGATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
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| 3UTR CAA 72 bp | AGACACACACTGCTGGGATCAACATTAAAACTGTCCTaGCCCACAAGAGGTGGGAGGCAAAGGGAGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RHTLLGSTLKLS*PTRGGRQREKV Trigger: AACTTTCTCCCTTTGCCTCCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGCAGTGTGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| CDS-3UTR GCA 90 bp | ATTCTGGCAAGCACTAGAACAGAACGACACTGGGACAACTGGTCAGTTACAGAGGCGAGCAAACAAGTCTaGTTCTACCAGCTCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILASTRTERHWDNWSVTEASKQV*FYQLFD Trigger: GTCAAAGAGCTGGTAGAAGCAGACTTGTTTGCTCGC...CTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGTTCTAGTGCTTGCCAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CCA 90 bp | ACAGAACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCTCAAAGCCACTATTCTaGAGAGACTCATTTGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: TERHWDNWSVTEHRLLHSSKPLF*RDSFEL Trigger: CAATTCAAATGAGTCTCTCCAGAATAGTGGCTTTGA...GCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CCA 90 bp | CACACCAAGCTCTGTGCTGGAAGAGGCCTGGGCTGTTGCCCTTCTCTGAACTTTTCAAAGCCACTATTCTaGAGAGACTCATTTGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: HTKLCAGRGLGCCPSLNFSKPLF*RDSFEL Trigger: CAATTCAAATGAGTCTCTCCAGAATAGTGGCTTTGA...AAAGTTCAGAGAAGGGCAACAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237667.2 |
||
| CDS-3UTR CCA 90 bp | CCACCAAGTAACTACCAAGCCACTTACCGAATCATGAAGAAGACAGTTTTTCAAAGGGAGCTGGCAGCATaGACGGGGACAATACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPSNYQATYRIMKKTVFQRELAA*TGTIHH Trigger: GTGGTGTATTGTCCCCGTCCATGCTGCCAGCTCCCT...TTGAAAAACTGTCTTCTTCATGATTCGGTAAGTGGCTTGGTAGTTACTTGGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR CCA 90 bp | AGACACACACTGCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGTGCAGTTACCTTACATaGAGAAAGCCCGTGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHTLLGSTLKLSLPTRGGCSYLT*RKPVIG Trigger: ACCTATCACGGGCTTTCTCCATGTAAGGTAACTGCA...CCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGCAGTGTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
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| CDS-3UTR GCA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCCCACACCAAGCTCTGTaGTGGAAGAGGCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLPHQAL*WKRPGL Trigger: CAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTGTGG...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
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| CDS-3UTR GCA 90 bp | GTAGAAAACACATGTTCACAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCGGTTGTCTAGGTGCTTaGAGAGAGCAGAGAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VENTCSQATGELLSLQNIGCLGA*REQRAL Trigger: GAGCGCTCTCTGCTCTCTGCAAGCACCTAGACAACC...GATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTGTGAACATGTGTTTTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCCACCAAGTAACTACCAAGTCCACAGTTTCTTCTTaGTCTACATCCGCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QATGELLSLQNIHQVTTKSTVSS*STSAAA Trigger: TGCTGCGGCGGATGTAGACCAAGAAGAAACTGTGGA...CTTGGTAGTTACTTGGTGGATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR GCA 90 bp | TTGACAATCCAGAAGCAGTCTGAGCTGACAGTTAAGCAATTCCTTAATTTTCAGATTTCTGTATGGGTGTaGCACAGCAGGGGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTIQKQSELTVKQFLNFQISVWV*HSRGSS Trigger: AGAGCTGCCCCTGCTGTGGCACACCCATACAGAAAT...CTGAAAATTAAGGAATTGCTTAACTGTCAGCTCAGACTGCTTCTGGATTGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR CCA 90 bp | ATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCGAGACATGCATCACAGGGAGCTaGCAGCATGGACGGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: IKLRIRNPAIKLLLSLETCITGS*QHGRGQ Trigger: TTGTCCCCGTCCATGCTGCCAGCTCCCTGTGATGCA...TGTCTCGAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR CCA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCTGCATCACAGGGAGCTaGCAGCATGGACGGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLCITGS*QHGRGQ Trigger: TTGTCCCCGTCCATGCTGCCAGCTCCCTGTGATGCA...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR TCA 90 bp | ATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCGAGACACAGAGAGCAGAGAGCTaGGTTGGTGACAGCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKLRIRNPAIKLLLSLETQRAES*VGDSHL Trigger: CAAATGGCTGTCACCAACTCAGCTCTCTGCTCTCTG...TGTCTCGAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 |
||
| CDS-3UTR GCA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCCACAGGTTGTCTAGGTaGTTGCAGAGAGCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLHRLSR*LQRAES Trigger: GCTCTCTGCTCTCTGCAAGCACCTAGACAACCTGTG...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCGAGACACAAACAGCACCACTCTaGCTCGGTGTTCTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IKLRIRNPAIKLLLSLETQTAPL*LGVLPT Trigger: TGTGGGAAGAACACCGAGGCAGAGTGGTGCTGTTTG...TGTCTCGAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236649.2 |
||
| CDS-3UTR CCA 90 bp | ATACTTTTAATGTACTATAGACTTCTATTCTGGCAAGCACTAGAACAGAACGACCGTCTAATTTCTGTATaGGTGTGCCACAGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLMYYRLLFWQALEQNDRLISV*VCHSRG Trigger: GCCCCTGCTGTGGCACACCCATACAGAAATTAGACG...GTCGTTCTGTTCTAGTGCTTGCCAGAATAGAAGTCTATAGTACATTAAAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCCGTCTAATTTCTGTATaGGTGTGCCACAGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLRLISV*VCHSRG Trigger: GCCCCTGCTGTGGCACACCCATACAGAAATTAGACG...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR TCA 90 bp | CAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCCACCAAGTAACTACCAAGGAGACTCAGAATCAGTaGAATGTCTGTAAGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QATGELLSLQNIHQVTTKETQNQ*NVCKDL Trigger: CAAATCCTTACAGACATTTCACTGATTCTGAGTCTC...CTTGGTAGTTACTTGGTGGATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR CCA 90 bp | GTAGAAAACACATGTTCACAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCTGCAGTTACCTTACATaGAGAAAGCCCGTGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VENTCSQATGELLSLQNICSYLT*RKPVIG Trigger: ACCTATCACGGGCTTTCTCCATGTAAGGTAACTGCA...GATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTGTGAACATGTGTTTTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR GCA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCGCGAGCAAACAAGTCTaGTTCTACCAGCTCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLASKQV*FYQLFD Trigger: GTCAAAGAGCTGGTAGAAGCAGACTTGTTTGCTCGC...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
||
| CDS-3UTR CCA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCTGCAGTTACCTTACATaGAGAAAGCCCGTGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLCSYLT*RKPVIG Trigger: ACCTATCACGGGCTTTCTCCATGTAAGGTAACTGCA...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
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| CDS-3UTR CCA 90 bp | GTAGAAAACACATGTTCACAAGCTACAGGTGAATTACTGTCCCTTCAAAACATCCAACCTGTTAAAGCATaGAGACTCAGAATCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VENTCSQATGELLSLQNIQPVKA*RLRISE Trigger: TTCACTGATTCTGAGTCTCCATGCTTTAACAGGTTG...GATGTTTTGAAGGGACAGTAATTCACCTGTAGCTTGTGAACATGTGTTTTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
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| CDS-3UTR CCA 90 bp | ATACTTTTAATGTACTATAGACTTCTATTCTGGCAAGCACTAGAACAGAACGACCAACCTGTTAAAGCATaGAGACTCAGAATCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILLMYYRLLFWQALEQNDQPVKA*RLRISE Trigger: TTCACTGATTCTGAGTCTCCATGCTTTAACAGGTTG...GTCGTTCTGTTCTAGTGCTTGCCAGAATAGAAGTCTATAGTACATTAAAAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | ACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGACAGCAGGGGCAGCTCTaGGAGTTCTTCTCCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TTLGQLVSYRAQAPPQHGQQGQL*EFFSSQ Trigger: CTGGCTGGAGAAGAACTCCAAGAGCTGCCCCTGCTG...TCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | ACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGCAGCAGGGGCAGCTCTaGGAGTTCTTCTCCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TLGQLVSYRAQAPPQHGWQQGQL*EFFSSQ Trigger: CTGGCTGGAGAAGAACTCCAAGAGCTGCCCCTGCTG...CCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | GACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGAGGTTGTCTAGGTGCTaGCAGAGAGCAGAGAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: DTGTTGQLQSTGSSTARMRLSRC*QRAESA Trigger: AGCGCTCTCTGCTCTCTGCAAGCACCTAGACAACCT...CATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236649.2 |
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| CDS-3UTR CAA 90 bp | CAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTGAGCAGTGTACAGAGAATGATCCACAGTTTCTTCTaGGTCTACATCCGCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: QSTGSSTARMGVSSVQRMIHSFF*VYIRRS Trigger: GCTGCGGCGGATGTAGACCAAGAAGAAACTGTGGAT...CATTCTCTGTACACTGCTCACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | GACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGATCCACAGTTTCTTCTaGGTCTACATCCGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DTGTTGQLQSTGSSTARMIHSFF*VYIRRS Trigger: GCTGCGGCGGATGTAGACCAAGAAGAAACTGTGGAT...CATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | CTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGCCAGTGCAAGTCATCTaGTTGCAGCCGTCTAATTTC | + |
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Preference number: 5 (lower is better) Translates to: LGQLVSYRAQAPPQHGWEPVQVI*LQPSNF Trigger: GAAATTAGACGGCTGCAACAAGATGACTTGCACTGG...CTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | CTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTCTGGAGAGACTCATTaGAATTGCCGCTCACGAATA | + |
|
Preference number: 5 (lower is better) Translates to: LGQLVSYRAQAPPQHGWESGETH*NCRSRI Trigger: TATTCGTGAGCGGCAATTCAAATGAGTCTCTCCAGA...CTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | CTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGGTGCAAGTCATCTTGTaGCAGCCGTCTAATTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LGQLVSYRAQAPPQHGWEVQVIL*QPSNFC Trigger: ACAGAAATTAGACGGCTGCAACAAGATGACTTGCAC...CTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | CAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTGAGCAGTGTACAGAGAATGCCAGTGCAAGTCATCTaGTTGCAGCCGTCTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSTGSSTARMGVSSVQRMPVQVI*LQPSNF Trigger: GAAATTAGACGGCTGCAACAAGATGACTTGCACTGG...CATTCTCTGTACACTGCTCACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | AACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGTCTGGAGAGACTCATTaGAATTGCCGCTCACGAATA | + |
|
Preference number: 5 (lower is better) Translates to: NDTGTTGQLQSTGSSTARSGETH*NCRSRI Trigger: TATTCGTGAGCGGCAATTCAAATGAGTCTCTCCAGA...CCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | TGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTGTGCAAGTCATCTTGTaGCAGCCGTCTAATTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: WDNWSVTEHRLLHSTDGSVQVIL*QPSNFC Trigger: ACAGAAATTAGACGGCTGCAACAAGATGACTTGCAC...ACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | TGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGATGGGAGTAAGAACAGTTTACTATaGAAGCACTTCGTCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: WDNWSVTEHRLLHSTDGSKNSLL*KHFVCR Trigger: TCGGCAGACGAAGTGCTTCAATAGTAAACTGTTCTT...ACTCCCATCCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | AACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCACGGAAGAACAGTTTACTATaGAAGCACTTCGTCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: NDTGTTGQLQSTGSSTARKNSLL*KHFVCR Trigger: TCGGCAGACGAAGTGCTTCAATAGTAAACTGTTCTT...CCGTGCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | ACAGAACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCGTGCAAGTCATCTTGTaGCAGCCGTCTAATTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: TERHWDNWSVTEHRLLHSVQVIL*QPSNFC Trigger: ACAGAAATTAGACGGCTGCAACAAGATGACTTGCAC...GCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | ACAGAACGACACTGGGACAACTGGTCAGTTACAGAGCACAGGCTCCTCCACAGCAAGAACAGTTTACTATaGAAGCACTTCGTCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: TERHWDNWSVTEHRLLHSKNSLL*KHFVCR Trigger: TCGGCAGACGAAGTGCTTCAATAGTAAACTGTTCTT...GCTGTGGAGGAGCCTGTGCTCTGTAACTGACCAGTTGTCCCAGTGTCGTTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | GCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGAGGCAAAGGGACCAGTGCAAGTCATCTaGTTGCAGCCGTCTAATTTC | + |
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Preference number: 5 (lower is better) Translates to: AGINIKTVLAHKRWEAKGPVQVI*LQPSNF Trigger: GAAATTAGACGGCTGCAACAAGATGACTTGCACTGG...TCCCTTTGCCTCCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
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| CDS-3UTR CAA 90 bp | CACCAAGCTCTGTGCTGGAAGAGGCCTGGGCTGTTGCCCTTCTCTGAACTTTTTAGAGACTCATTTGAATaGCCAGGGCCAGTAGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: HQALCWKRPGLLPFSELFRDSFE*PGPVVH Trigger: ATGAACTACTGGCCCTGGCAATTCAAATGAGTCTCT...AAAAAGTTCAGAGAAGGGCAACAGCCCAGGCCTCTTCCAGCACAGAGCTTGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237667.2 |
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| CDS-3UTR CAA 90 bp | GCTGGGATCAACATTAAAACTGTCCTTGCCCACAAGAGGTGGGAGGCAAAGGGATCTGGAGAGACTCATTaGAATTGCCGCTCACGAATA | + |
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Preference number: 5 (lower is better) Translates to: AGINIKTVLAHKRWEAKGSGETH*NCRSRI Trigger: TATTCGTGAGCGGCAATTCAAATGAGTCTCTCCAGA...TCCCTTTGCCTCCCACCTCTTGTGGGCAAGGACAGTTTTAATGTTGATCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072376.13 ENSMUST00000171461.3 |
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| CDS-3UTR CAA 90 bp | AAGCCAATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCCAGCAGGGGCAGCTCTaGGAGTTCTTCTCCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: KPIKLRIRNPAIKLLLSLQQGQL*EFFSSQ Trigger: CTGGCTGGAGAAGAACTCCAAGAGCTGCCCCTGCTG...GAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTATTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
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| CDS-3UTR CAA 90 bp | ATACTTTTAATGTACTATAGACTTCTATTCTGGCAAGCACTAGAACAGAACGACCAGCAGGGGCAGCTCTaGGAGTTCTTCTCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILLMYYRLLFWQALEQNDQQGQL*EFFSSQ Trigger: CTGGCTGGAGAAGAACTCCAAGAGCTGCCCCTGCTG...GTCGTTCTGTTCTAGTGCTTGCCAGAATAGAAGTCTATAGTACATTAAAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 ENSMUST00000236116.2 |
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| CDS-3UTR CAA 90 bp | ATGATGCTCTTCACAGGTTTAGAGAGCATTCATGAGGAATACACTGGGCTTTTTCCAGTGCAAGTCATCTaGTTGCAGCCGTCTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: MMLFTGLESIHEEYTGLFPVQVI*LQPSNF Trigger: GAAATTAGACGGCTGCAACAAGATGACTTGCACTGG...AAAAAGCCCAGTGTATTCCTCATGAATGCTCTCTAAACCTGTGAAGAGCATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
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| CDS-3UTR CAA 90 bp | CCACCAAGTAACTACCAAGCCACTTACCGAATCATGAAGAAGACAGTTTTTCAAGTGCAAGTCATCTTGTaGCAGCCGTCTAATTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PPSNYQATYRIMKKTVFQVQVIL*QPSNFC Trigger: ACAGAAATTAGACGGCTGCAACAAGATGACTTGCAC...TTGAAAAACTGTCTTCTTCATGATTCGGTAAGTGGCTTGGTAGTTACTTGGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
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| CDS-3UTR CAA 90 bp | ATAAAACTCAGAATTAGGAATCCAGCTATCAAGCTACTATTATCACTCGAGACAAAGAACAGTTTACTATaGAAGCACTTCGTCTGCCGA | + |
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Preference number: 5 (lower is better) Translates to: IKLRIRNPAIKLLLSLETKNSLL*KHFVCR Trigger: TCGGCAGACGAAGTGCTTCAATAGTAAACTGTTCTT...TGTCTCGAGTGATAATAGTAGCTTGATAGCTGGATTCCTAATTCTGAGTTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072376.13 ENSMUST00000170811.8 ENSMUST00000171461.3 |
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