Pregenerated sensors for RNF139 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037075Ensembl transcript IDs: ENSMUST00000036904.7
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCTTTACCAAGCACCGGTGACGTTAACAAACATGAGCAGTAAATaGCTCTGCTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: VLYQAPVTLTNMSSK*LCCPSLSRAAVPLA Trigger: GGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAGCAGAGCCATTTACTGCTCATGTTTGTTAACGTCACCGGTGCTTGGTAAAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR GCA 90 bp | ACTGCTCATTTTGAGCAAAGAAATGAGTCTCTGAGCTCTTCTCTCTaGTCTAAGTACAAGCCTAGAGCCCCTCCCACAGCCACACCTAAC | + |
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Preference number: 1 (lower is better) Translates to: TAHFEQRNESLSSSL*SKYKPRAPPTATPN Trigger: GTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCTTGTACTTAGAGCAGAGAGAAGAGCTCAGAGACTCATTTCTTTGCTCAAAATGAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR GCA 90 bp | AGTGCAAGAGATCTCATTACAGATGGTTGTGAACCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTCTGGAATACCAGTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SARDLITDGCEPPCG*WDLNSGPLEYQSVL Trigger: GAGCACTGACTGGTATTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATCTCTTGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR GCA 90 bp | CACAAACATTCCTTGCTGCCTGTTAGAGACTATATGAATAAGCAGTaGCTTTCAAATTTTTGGCCCTATTCTCTTCAATACCATTTTATT | + |
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Preference number: 1 (lower is better) Translates to: HKHSLLPVRDYMNKQ*LSNFWPYSLQYHFI Trigger: AATAAAATGGTATTGAAGAGAATAGGGCCAAAAATTTGAAAGGCACTGCTTATTCATATAGTCTCTAACAGGCAGCAAGGAATGTTTGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCATTAGGGTCCTCAGAATaGGAGAAAAAGCTCGTGACC | + |
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Preference number: 2 (lower is better) Translates to: LPKSQQSSRALGHRPPAALGSSE*EKKLVT Trigger: GGTCACGAGCTTTTTCTCCCATTCTGAGGACCCTAA...TGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR CAA 90 bp | AGTAAATGGCTCTGCTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTaGGCCACCGTCCGCCAGCAGCAGCACTACTTACAGATGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SKWLCCPSLSRAAVP*ATVRQQQHYLQMQS Trigger: AGACTGCATCTGTAAGTAGTGCTGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAGCAGAGCCATTTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCACTTTTAAGATGCTCATaGTCCGGGAACAAAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LPKSQQSSRALGHRPPAALLRCS*SGNKSA Trigger: AGCACTTTTGTTCCCGGATCATGAGCATCTTAAAAG...TGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCAGTTTTATGCTCTCACTaGAAACACAGTGATGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LPKSQQSSRALGHRPPAAVLCSH*KHSDAS Trigger: AGAAGCATCACTGTGTTTGCAGTGAGAGCATAAAAC...TGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCAGTCAAGGATTTAGCATaGACACAAACATTCCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LPKSQQSSRALGHRPPAAVKDLA*TQTFLA Trigger: AGCAAGGAATGTTTGTGTGCATGCTAAATCCTTGAC...TGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCAGCACTAAGACACCCAGCAGAGTaGAAGAGATCTCATTACAGA | + |
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Preference number: 2 (lower is better) Translates to: KSQQSSRALGHRPPAAALRHPAE*KRSHYR Trigger: TCTGTAATGAGATCTCTTGCACTCTGCTGGGTGTCT...TAGTGCTGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCAGCACTATATATGAATAAGCAGTaGCTTTCAAATTTTTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: KSQQSSRALGHRPPAAALYMNKQ*LSNFWP Trigger: GGGCCAAAAATTTGAAAGGCACTGCTTATTCATATA...TAGTGCTGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTAAGTACAAGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTGCTTGGTTACACACTaGCGTGAAGCATATTACTCC | + |
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Preference number: 2 (lower is better) Translates to: CSKYKPRAPPTATPNLSYCLVTH*REAYYS Trigger: GGAGTAATATGCTTCACGTCAGTGTGTAACCAAGCA...ATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCTTGTACTTAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCAGGTTGCTGGCTTACTGGCTTACTAAACAGTGCTTTACCAAGCACCGGCTGAGCTCTTCTCTCTaGTCTAAGTACAAGCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: LFRLLAYWLTKQCFTKHRLSSSL*SKYKPR Trigger: TCTAGGCTTGTACTTAGAGCAGAGAGAAGAGCTCAG...CCGGTGCTTGGTAAAGCACTGTTTAGTAAGCCAGTAAGCCAGCAACCTGAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR CCA 90 bp | CTGTTCAGGTTGCTGGCTTACTGGCTTACTAAACAGTGCTTTACCAAGCACCGGAAGACCCACTGGAATTaGCCAACACGCTCTATAACA | + |
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Preference number: 2 (lower is better) Translates to: LFRLLAYWLTKQCFTKHRKTHWN*PTRSIT Trigger: TGTTATAGAGCGTGTTGGCCAATTCCAGTGGGTCTT...CCGGTGCTTGGTAAAGCACTGTTTAGTAAGCCAGTAAGCCAGCAACCTGAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR CAA 90 bp | GATCTCATTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTCTGGAATACCAGTCAGTGCTCTTAACTGCT | + |
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Preference number: 2 (lower is better) Translates to: DLITDGCEPPCGCWD*NSGPLEYQSVLLTA Trigger: AGCAGTTAAGAGCACTGACTGGTATTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCAGGTTGCTGGCTTACTGGCTTACTAAACAGTGCTTTACCAAGCACCGGTCCAAAGTAGGAAGGTaGCTACTTAGCCTGTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: LFRLLAYWLTKQCFTKHRSKVGR*LLSLFY Trigger: GTAAAACAGGCTAAGTAGGCACCTTCCTACTTTGGA...CCGGTGCTTGGTAAAGCACTGTTTAGTAAGCCAGTAAGCCAGCAACCTGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGTCAGAGAAGAAGACCCACTGGAATTGGCCAACACGCTCTATAACAACACCATCTCATCAGAAGTCTaGAAGGACAGTTTTATGCTC | + |
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Preference number: 2 (lower is better) Translates to: AVREEDPLELANTLYNNTISSEV*KDSFML Trigger: GAGCATAAAACTGTCCTTTCAGACTTCTGATGAGAT...GGTGTTGTTATAGAGCGTGTTGGCCAATTCCAGTGGGTCTTCTTCTCTGACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCAGGTTGCTGGCTTACTGGCTTACTAAACAGTGCTTTACCAAGCACCGGCACACAAACATTCCTTaGTGCCTGTTAGAGACTATA | + |
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Preference number: 2 (lower is better) Translates to: LFRLLAYWLTKQCFTKHRHTNIP*CLLETI Trigger: TATAGTCTCTAACAGGCAGCAAGGAATGTTTGTGTG...CCGGTGCTTGGTAAAGCACTGTTTAGTAAGCCAGTAAGCCAGCAACCTGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR GCA 90 bp | TGCTCTAAGTACAAGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTCTAGCAGGTTATCTTaGCTTAGTTTTAGAAGACAT | + |
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Preference number: 2 (lower is better) Translates to: CSKYKPRAPPTATPNLSYSSRLS*LSFRRH Trigger: ATGTCTTCTAAAACTAAGGCAAGATAACCTGCTAGA...ATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCTTGTACTTAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR TCA 90 bp | GTGCAAGAGATCTCATTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTGGTTACACACTGACGTaGAGCATATTACTCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: VQEISLQMVVNHHVVAGIGYTLT*SILLHF Trigger: AAAATGGAGTAATATGCTTCACGTCAGTGTGTAACC...AATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATCTCTTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR TCA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATCTGTTAGAGACTATATaGATAAGCAGTGCCTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SLEPLPQPHLTCHICLFYLLETI*ISSAFQ Trigger: TTGAAAGGCACTGCTTATTCATATAGTCTCTAACAG...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR CAA 90 bp | AGTTTAGTTGATAACAAGCCTATTTCTCAATTCTGTCCCTGTTTTTaGACTTTTGAACCTAGCTCTAAGCTGCAGCTCAGGTTTCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SLVDNKPISQFCPCF*TFEPSSKLQLRFQV Trigger: AACTTGAAACCTGAGCTGCAGCTTAGAGCTAGGTTCAAAAGTCAAAAAACAGGGACAGAATTGAGAAATAGGCTTGTTATCAACTAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR CCA 72 bp | TCTGCTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTaGCCACCGTCCGCCAGCAGCAGCACTACTTACAGA | + |
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Preference number: 3 (lower is better) Translates to: SAAQVSAEQPCP*PPSASSSTTYR Trigger: TCTGTAAGTAGTGCTGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCAGTGCCTTTCAAATTTTaGGCCCTATTCTCTTCAATA | + |
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Preference number: 3 (lower is better) Translates to: LPKSQQSSRALGHRPPAAVPFKF*ALFSSI Trigger: TATTGAAGAGAATAGGGCCAAAAATTTGAAAGGCAC...TGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR GCA 72 bp | GTGACGTTAACAAACATGAGCAGTAAATGGCTCTGCTaGCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: VTLTNMSSKWLC*PSLSRAAVPLA Trigger: GGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAGCAGAGCCATTTACTGCTCATGTTTGTTAACGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR GCA 72 bp | CCGGTGACGTTAACAAACATGAGCAGTAAATGGCTCTaGTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: PVTLTNMSSKWL*CPSLSRAAVPL Trigger: CAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAGCAGAGCCATTTACTGCTCATGTTTGTTAACGTCACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR GCA 72 bp | TGGCCACCGTCCGCCAGCAGCAGCACTACTTACAGATaGAGTCTGAGTTCACTGCACAGACTGCATGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: WPPSASSSTTYR*SLSSLHRLHVN Trigger: ATTCACATGCAGTCTGTGCAGTGAACTCAGACTGCATCTGTAAGTAGTGCTGCTGCTGGCGGACGGTGGCCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR CCA 72 bp | CAAGCACCGGTGACGTTAACAAACATGAGCAGTAAATaGCTCTGCTGCCCAAGTCTCAGCAGAGCAGCCGTG | + |
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Preference number: 3 (lower is better) Translates to: QAPVTLTNMSSK*LCCPSLSRAAV Trigger: CACGGCTGCTCTGCTGAGACTTGGGCAGCAGAGCCATTTACTGCTCATGTTTGTTAACGTCACCGGTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR GCA 72 bp | TTTGAGCAAAGAAATGAGTCTCTGAGCTCTTCTCTCTaGTCTAAGTACAAGCCTAGAGCCCCTCCCACAGCC | + |
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Preference number: 3 (lower is better) Translates to: FEQRNESLSSSL*SKYKPRAPPTA Trigger: GGCTGTGGGAGGGGCTCTAGGCTTGTACTTAGAGCAGAGAGAAGAGCTCAGAGACTCATTTCTTTGCTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR TCA 72 bp | CCAGCAGAGTGCAAGAGATCTCATTACAGATGGTTGTaGACCACCATGTGGTTGCTGGGATTTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PAECKRSHYRWL*TTMWLLGFELR Trigger: CCTGAGTTCAAATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATCTCTTGCACTCTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR CAA 90 bp | GCAGTCAGAGAAGAAGACCCACTGGAATTGGCCAACACGCTCTATAACAACACCTTCATGGAGGAATCTTaGGCACAATTGACGCACCAT | + |
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Preference number: 3 (lower is better) Translates to: AVREEDPLELANTLYNNTFMEES*AQLTHH Trigger: ATGGTGCGTCAATTGTGCCAAAGATTCCTCCATGAA...GGTGTTGTTATAGAGCGTGTTGGCCAATTCCAGTGGGTCTTCTTCTCTGACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR CCA 72 bp | CTCATTACAGATGGTTGTGAACCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTCTGGAATACCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LITDGCEPPCGC*DLNSGPLEYQS Trigger: TGACTGGTATTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCAGGTTGCTGGCTTACTGGCTTACTAAACAGTGCTTTACCAAGCACCGGGAATCTTTGGCACAATaGACGCACCATATGATCATT | + |
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Preference number: 3 (lower is better) Translates to: LFRLLAYWLTKQCFTKHRESLAQ*THHMII Trigger: AATGATCATATGGTGCGTCAATTGTGCCAAAGATTC...CCGGTGCTTGGTAAAGCACTGTTTAGTAAGCCAGTAAGCCAGCAACCTGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR-3UTR CAA 90 bp | GTGCAAGAGATCTCATTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTTTCTGTCCCTGTTTTTaGACTTTTGAACCTAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: VQEISLQMVVNHHVVAGIFCPCF*TFEPSS Trigger: AGAGCTAGGTTCAAAAGTCAAAAAACAGGGACAGAA...AATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATCTCTTGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR TCA 72 bp | TGTCCACCTTTTTATTGTGTAATCTCATCAGAAGTCTaGAAGGACAGTTTTATGCTCTCACTGCAAACACAG | + |
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Preference number: 3 (lower is better) Translates to: CPPFYCVISSEV*KDSFMLSLQTQ Trigger: CTGTGTTTGCAGTGAGAGCATAAAACTGTCCTTTCAGACTTCTGATGAGATTACACAATAAAAAGGTGGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| 3UTR TCA 72 bp | CTGCAGCTTTATTCCTCAAAGTACAGAAAAATGCACTaGATAAAAAGGTACTGTTCAGGTTGCTGGCTTACT | + |
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Preference number: 3 (lower is better) Translates to: LQLYSSKYRKMH*IKRYCSGCWLT Trigger: AGTAAGCCAGCAACCTGAACAGTACCTTTTTATTCAGTGCATTTTTCTGTACTTTGAGGAATAAAGCTGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR GCA 90 bp | CTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCATGGGCCATCCGCACCTaGTGCTGCGGGGGCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: LPKSQQSSRALGHRPPAAWAIRT*CCGGPT Trigger: GGTGGGGCCCCCGCAGCAGCAGGTGCGGATGGCCCA...TGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR GCA 90 bp | AAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCAGCACTAAGCGCCGCCCAGACCTaGTGCTGGGCCATCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: KSQQSSRALGHRPPAAALSAAQT*CWAIRT Trigger: GGTGCGGATGGCCCAGCAGCAGGTCTGGGCGGCGCT...TAGTGCTGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR TCA 90 bp | CTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCATTAGCTGCAGAACGATaGGTGCCATCCACAGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LPKSQQSSRALGHRPPAALAAER*VPSTVR Trigger: CCTCACTGTGGATGGCACTCATCGTTCTGCAGCTAA...TGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR CCA 90 bp | CTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCAGACCCGAAGTATGTCTaGGAAACGAATCCTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LPKSQQSSRALGHRPPAADPKYV*ETNPLP Trigger: TGGAAGAGGATTCGTTTCCCAGACATACTTCGGGTC...TGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR TCA 90 bp | AAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCAGCACTAGTGTCTATGGAAAGATaGCACATGGGAGGCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: KSQQSSRALGHRPPAAALVSMER*HMGGTE Trigger: CTCAGTGCCTCCCATGTGTCATCTTTCCATAGACAC...TAGTGCTGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR GCA 90 bp | GCAGTCAGAGAAGAAGACCCACTGGAATTGGCCAACACGCTCTATAACAACACCGCCGCCCAGACCTGCTaGTGGGCCATCCGCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: AVREEDPLELANTLYNNTAAQTC*WAIRTC Trigger: GCAGGTGCGGATGGCCCAGCAGCAGGTCTGGGCGGC...GGTGTTGTTATAGAGCGTGTTGGCCAATTCCAGTGGGTCTTCTTCTCTGACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR CCA 90 bp | CTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCACTGACTCAAACATCATaGTATAGGCCCCATTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: LPKSQQSSRALGHRPPAALTQTS*YRPHSQ Trigger: TTGGGAATGGGGCCTATACCATGATGTTTGAGTCAG...TGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR TCA 90 bp | CTGCCCAAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCACAGTTCTACGATTCATaGATGTCTTCCAGCCATTTT | + |
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Preference number: 4 (lower is better) Translates to: LPKSQQSSRALGHRPPAAQFYDS*MSSSHF Trigger: AAAATGGCTGGAAGACATTCATGAATCGTAGAACTG...TGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTTGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR TCA 90 bp | CTGTTCAGGTTGCTGGCTTACTGGCTTACTAAACAGTGCTTTACCAAGCACCGGGAGTGCCATCCACAGTaGGGGCCCTTTCCGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LFRLLAYWLTKQCFTKHRECHPQ*GPFPRK Trigger: CTTCCTCGGAAAGGGCCCTCACTGTGGATGGCACTC...CCGGTGCTTGGTAAAGCACTGTTTAGTAAGCCAGTAAGCCAGCAACCTGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR TCA 90 bp | AAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCAGCACTAGAATCTGCAGTAATGTaGCATATCCAATTCCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: KSQQSSRALGHRPPAAALESAVM*HIQFQR Trigger: CCTTTGGAATTGGATATGTCACATTACTGCAGATTC...TAGTGCTGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR TCA 90 bp | AAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCAGCACTAATTGGACAAGTATCTTaGATGTACAGCCATTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: KSQQSSRALGHRPPAAALIGQVS*MYSHFR Trigger: TCGGAAATGGCTGTACATTCAAGATACTTGTCCAAT...TAGTGCTGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS-3UTR TCA 90 bp | CTGTTCAGGTTGCTGGCTTACTGGCTTACTAAACAGTGCTTTACCAAGCACCGGAGCCGGAGAAAGATCTaGAGCCCGATGCAGAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFRLLAYWLTKQCFTKHRSRRKI*SPMQNR Trigger: CCGGTTCTGCATCGGGCTTCAGATCTTTCTCCGGCT...CCGGTGCTTGGTAAAGCACTGTTTAGTAAGCCAGTAAGCCAGCAACCTGAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | AAGTCTCAGCAGAGCAGCCGTGCCCTTGGCCACCGTCCGCCAGCAGCAGCACTACCGAATTTTACTTCCTaGCTCAAACATCATGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: KSQQSSRALGHRPPAAALPNFTS*LKHHGI Trigger: TATACCATGATGTTTGAGTCAGGAAGTAAAATTCGG...TAGTGCTGCTGCTGGCGGACGGTGGCCAAGGGCACGGCTGCTCTGCTGAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR GCA 90 bp | GTGCAAGAGATCTCATTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTTGCGGCTGCTGCTGCTaGGCCTGTGTGCTGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: VQEISLQMVVNHHVVAGICGCCC*ACVLNP Trigger: GGGATTCAGCACACAGGCGCAGCAGCAGCAGCCGCA...AATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATCTCTTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR GCA 90 bp | CTGTTCAGGTTGCTGGCTTACTGGCTTACTAAACAGTGCTTTACCAAGCACCGGAGATCTGAAGCCCGATaGAGAACCGGCTTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFRLLAYWLTKQCFTKHRRSEAR*RTGFGW Trigger: CCAGCCAAAGCCGGTTCTGCATCGGGCTTCAGATCT...CCGGTGCTTGGTAAAGCACTGTTTAGTAAGCCAGTAAGCCAGCAACCTGAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR GCA 90 bp | TGCTCTAAGTACAAGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATATTAAATTCTGCGGCTaGTGCTGCTGCGCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSKYKPRAPPTATPNLSYIKFCG*CCCACV Trigger: CACACAGGCGCAGCAGCAGCAGCCGCAGAATTTAAT...ATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCTTGTACTTAGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | TGCTCTAAGTACAAGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATCTCGATTCCAAACGCTaGCGTGTTGTAGGCACCATA | + |
|
Preference number: 4 (lower is better) Translates to: CSKYKPRAPPTATPNLSYLDSKR*RVVGTI Trigger: TATGGTGCCTACAACACGTCAGCGTTTGGAATCGAG...ATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCTTGTACTTAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CCA 90 bp | TGCTCTAAGTACAAGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTGGAAAGATGACACATaGGAGGCACTGAGCGACATT | + |
|
Preference number: 4 (lower is better) Translates to: CSKYKPRAPPTATPNLSYWKDDT*EALSDI Trigger: AATGTCGCTCAGTGCCTCCCATGTGTCATCTTTCCA...ATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCTTGTACTTAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | GTGCAAGAGATCTCATTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTGCACTACTGTCTCTCTaGTGTGTAATGGCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQEISLQMVVNHHVVAGIALLSL*CVMAAL Trigger: CAGAGCTGCCATTACACATCAGAGAGACAGTAGTGC...AATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATCTCTTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATACACATGGGAGGCACTaGGCGACATTAATACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLEPLPQPHLTCHICLFYTHGRH*ATLIQG Trigger: ACCCTGTATTAATGTCGCTCAGTGCCTCCCATGTGT...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CCA 90 bp | GTGCAAGAGATCTCATTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTGGGTCTGTCATCCCATaGATGAAATGCAGGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQEISLQMVVNHHVVAGIGSVIP*MKCRTA Trigger: TGCAGTCCTGCATTTCATCCATGGGATGACAGACCC...AATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATCTCTTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | GTGCAAGAGATCTCATTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTGTAAGACAGGGAGAATaGACAGGCAAGCAGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: VQEISLQMVVNHHVVAGIVRQGE*TGKQRQ Trigger: TTGTCTCTGCTTGCCTGTTCATTCTCCCTGTCTTAC...AATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATCTCTTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR GCA 90 bp | TGCTCTAAGTACAAGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATACATCATCTATTTCTTaGAAGTGGCTCCCTTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: CSKYKPRAPPTATPNLSYTSSIS*KWLPFI Trigger: GATAAAAGGGAGCCACTTGCAAGAAATAGATGATGT...ATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCTTGTACTTAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CCA 90 bp | GCAGTCAGAGAAGAAGACCCACTGGAATTGGCCAACACGCTCTATAACAACACCTCTATTTCTTGCAAGTaGCTCCCTTTTATCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVREEDPLELANTLYNNTSISCK*LPFISG Trigger: TCCTGAGATAAAAGGGAGCCACTTGCAAGAAATAGA...GGTGTTGTTATAGAGCGTGTTGGCCAATTCCAGTGGGTCTTCTTCTCTGACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | CTGTTCAGGTTGCTGGCTTACTGGCTTACTAAACAGTGCTTTACCAAGCACCGGGTCATCTTCTTCAGTTaGTCCAATAAAGGCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LFRLLAYWLTKQCFTKHRVIFFS*SNKGQY Trigger: ATATTGGCCTTTATTGGATCAACTGAAGAAGATGAC...CCGGTGCTTGGTAAAGCACTGTTTAGTAAGCCAGTAAGCCAGCAACCTGAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATTACGAGCAGATGTTGTaGACTCATGATAGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SLEPLPQPHLTCHICLFYYEQML*THDSRL Trigger: CAATCTGCTATCATGAGTTCACAACATCTGCTCGTA...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATTCGATGTACACTTTCTaGTGGCACATTGGACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLEPLPQPHLTCHICLFYSMYTF*WHIGQV Trigger: TACTTGTCCAATGTGCCATCAGAAAGTGTACATCGA...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | CTGTTCAGGTTGCTGGCTTACTGGCTTACTAAACAGTGCTTTACCAAGCACCGGGTTGTTAGATGCATTTaGGTTATCCTTGATCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LFRLLAYWLTKQCFTKHRVVRCI*VILDLI Trigger: GATGAGATCAAGGATAACTCAAATGCATCTAACAAC...CCGGTGCTTGGTAAAGCACTGTTTAGTAAGCCAGTAAGCCAGCAACCTGAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATCCGTTTCTTTCTCTTTaGGCATCATCATCACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLEPLPQPHLTCHICLFYPFLSL*ASSSQS Trigger: AGACTGTGATGATGATGCTCAAAGAGAAAGAAACGG...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR GCA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATCCACTTAAGTTTCACTaGCAAGACAAGCACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLEPLPQPHLTCHICLFYPLKFH*QDKHCV Trigger: AACACAGTGCTTGTCTTGGCAGTGAAACTTAAGTGG...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR GCA 90 bp | GCAGTCAGAGAAGAAGACCCACTGGAATTGGCCAACACGCTCTATAACAACACCCTCATGATAGCAGATTaGACAGACATCATCTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVREEDPLELANTLYNNTLMIAD*TDIIYF Trigger: GAAATAGATGATGTCTGTGCAATCTGCTATCATGAG...GGTGTTGTTATAGAGCGTGTTGGCCAATTCCAGTGGGTCTTCTTCTCTGACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR GCA 90 bp | TGCTCTAAGTACAAGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTGGATTTTCATTGGGTaGAATAAATCCGTTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSKYKPRAPPTATPNLSYWIFIG*NKSVVV Trigger: AACAACAACGGATTTATTGCACCCAATGAAAATCCA...ATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCTTGTACTTAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATTTATTAGATTGCAAATaGCGTCCCAGAAATCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLEPLPQPHLTCHICLFYLLDCK*RPRNHP Trigger: GGGATGATTTCTGGGACGTCATTTGCAATCTAATAA...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR GCA 90 bp | GTGCAAGAGATCTCATTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTTTTCCGAAGGCAGAGTaGATGGAAATAATGGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: VQEISLQMVVNHHVVAGIFPKAE*MEIMVT Trigger: TGTAACCATTATTTCCATGCACTCTGCCTTCGGAAA...AATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATCTCTTGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR TCA 90 bp | GTGCAAGAGATCTCATTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTCATTTGAGTTATCCTTaGTCTCATCTTCGATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VQEISLQMVVNHHVVAGIHLSYP*SHLRCT Trigger: TGTACATCGAAGATGAGATCAAGGATAACTCAAATG...AATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATCTCTTGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR GCA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATATCCCATGGATGAAATaGAGGACTGCAGTTAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLEPLPQPHLTCHICLFYIPWMK*RTAVNK Trigger: TTTATTAACTGCAGTCCTGCATTTCATCCATGGGAT...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| 3UTR CAA 72 bp | GATAACAAGCCTATTTCTCAATTCTGTCCCTGTTTTTaGACTTTTGAACCTAGCTCTAAGCTGCAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DNKPISQFCPCF*TFEPSSKLQLR Trigger: CCTGAGCTGCAGCTTAGAGCTAGGTTCAAAAGTCAAAAAACAGGGACAGAATTGAGAAATAGGCTTGTTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CAA 90 bp | GCAGTCAGAGAAGAAGACCCACTGGAATTGGCCAACACGCTCTATAACAACACCGATGCAGAACCGGCTTaGGCTGGAATCGTAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVREEDPLELANTLYNNTDAEPA*AGIVVG Trigger: TCCTACTACGATTCCAGCCAAAGCCGGTTCTGCATC...GGTGTTGTTATAGAGCGTGTTGGCCAATTCCAGTGGGTCTTCTTCTCTGACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CAA 90 bp | TGCTCTAAGTACAAGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATCATTGGACAAGTATCTaGAATGTACAGCCATTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CSKYKPRAPPTATPNLSYHWTSI*NVQPFP Trigger: CGGAAATGGCTGTACATTCAAGATACTTGTCCAATG...ATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCTTGTACTTAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CAA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATTCACCAACACTGAAGTaGCAGCTAATAGAAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLEPLPQPHLTCHICLFYSPTLK*QLIERL Trigger: CAGCCTTTCTATTAGCTGCAACTTCAGTGTTGGTGA...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CAA 90 bp | TGCTCTAAGTACAAGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATCCAAATAATGGGCTATaGAAGAAATTACAGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSKYKPRAPPTATPNLSYPNNGL*KKLQHS Trigger: TGAGTGCTGTAATTTCTTCAATAGCCCATTATTTGG...ATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCTTGTACTTAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS CCA 90 bp | ACATGGGAGGCACTGAGCGACATTAATACAGGGTCTGTCATCCCATaGATGAAATGCAGGACTGCAGTTAATAAAAGGCACATGTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TWEALSDINTGSVIP*MKCRTAVNKRHMFL Trigger: TAGAAACATGTGCCTTTTATTAACTGCAGTCCTGCATTTCATCCATGGGATGACAGACCCTGTATTAATGTCGCTCAGTGCCTCCCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CAA 90 bp | GCAGTCAGAGAAGAAGACCCACTGGAATTGGCCAACACGCTCTATAACAACACCACTCATGATAGCAGATaGCACAGACATCATCTATTT | + |
|
Preference number: 5 (lower is better) Translates to: AVREEDPLELANTLYNNTTHDSR*HRHHLF Trigger: AAATAGATGATGTCTGTGCAATCTGCTATCATGAGT...GGTGTTGTTATAGAGCGTGTTGGCCAATTCCAGTGGGTCTTCTTCTCTGACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CAA 90 bp | GTGCAAGAGATCTCATTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTGGGTTTGGATTTTCATaGGGTGCAATAAATCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VQEISLQMVVNHHVVAGIGFGFS*GAINPL Trigger: CAACGGATTTATTGCACCCAATGAAAATCCAAACCC...AATCCCAGCAACCACATGGTGGTTCACAACCATCTGTAATGAGATCTCTTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS GCA 90 bp | GCACTGAGCGACATTAATACAGGGTCTGTCATCCCATGGATGAAATaGAGGACTGCAGTTAATAAAAGGCACATGTTTCTACTTAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ALSDINTGSVIPWMK*RTAVNKRHMFLLKR Trigger: TCGCTTAAGTAGAAACATGTGCCTTTTATTAACTGCAGTCCTGCATTTCATCCATGGGATGACAGACCCTGTATTAATGTCGCTCAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CAA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATGACATCATCTATTTCTaGCAAGTGGCTCCCTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SLEPLPQPHLTCHICLFYDIIYF*QVAPFY Trigger: ATAAAAGGGAGCCACTTGCAAGAAATAGATGATGTC...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CAA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATGCATTTGAGTTATCCTaGATCTCATCTTCGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLEPLPQPHLTCHICLFYAFELS*ISSSMY Trigger: GTACATCGAAGATGAGATCAAGGATAACTCAAATGC...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS GCA 90 bp | ACACGGTGTTATACGAGCAGATGTTGTGAACTCATGATAGCAGATTaGACAGACATCATCTATTTCTTGCAAGTGGCTCCCTTTTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: TRCYTSRCCELMIAD*TDIIYFLQVAPFYL Trigger: GAGATAAAAGGGAGCCACTTGCAAGAAATAGATGATGTCTGTGCAATCTGCTATCATGAGTTCACAACATCTGCTCGTATAACACCGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CAA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATAGGACTCAGTTTCATTaGCCATCCTTAAAATGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SLEPLPQPHLTCHICLFYRTQFH*PSLKCT Trigger: TGTACATTTTAAGGATGGCAAATGAAACTGAGTCCT...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS-3UTR CAA 90 bp | AGCCTAGAGCCCCTCCCACAGCCACACCTAACCTGTCATATTTGTTTGTTTTATCCACTAATTATTAGATaGCAAATGACGTCCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLEPLPQPHLTCHICLFYPLIIR*QMTSQK Trigger: TTTCTGGGACGTCATTTGCAATCTAATAATTAGTGG...ATAAAACAAACAAATATGACAGGTTAGGTGTGGCTGTGGGAGGGGCTCTAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS TCA 90 bp | GTGCATGGAAATAATGGTTACACGGTGTTATACGAGCAGATGTTGTaGACTCATGATAGCAGATTGCACAGACATCATCTATTTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VHGNNGYTVLYEQML*THDSRLHRHHLFLA Trigger: TGCAAGAAATAGATGATGTCTGTGCAATCTGCTATCATGAGTTCACAACATCTGCTCGTATAACACCGTGTAACCATTATTTCCATGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS GCA 90 bp | CAAGTACACATACCGAGTAGAGTAGTAAAACCACTTAAGTTTCACTaGCAAGACAAGCACTGTGTTAAATATGAGAATCAAGGACGACAT | + |
|
Preference number: 5 (lower is better) Translates to: QVHIPSRVVKPLKFH*QDKHCVKYENQGRH Trigger: ATGTCGTCCTTGATTCTCATATTTAACACAGTGCTTGTCTTGGCAGTGAAACTTAAGTGGTTTTACTACTCTACTCGGTATGTGTACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS TCA 90 bp | TGGATTTTCATTGGGTGCAATAAATCCGTTGTTGTTAGATGCATTTaGGTTATCCTTGATCTCATCTTCGATGTACACTTTCTGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WIFIGCNKSVVVRCI*VILDLIFDVHFLMA Trigger: TGCCATCAGAAAGTGTACATCGAAGATGAGATCAAGGATAACTCAAATGCATCTAACAACAACGGATTTATTGCACCCAATGAAAATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS TCA 90 bp | GACATCATCTATTTCTTGCAAGTGGCTCCCTTTTATCTCAGGAAGTaGATTAATTTTCTTAACAGCAGTTCTACGATTCATGAATGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DIIYFLQVAPFYLRK*INFLNSSSTIHECL Trigger: AAGACATTCATGAATCGTAGAACTGCTGTTAAGAAAATTAATTCACTTCCTGAGATAAAAGGGAGCCACTTGCAAGAAATAGATGATGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS GCA 72 bp | ACCCGGAGCGCCACTTCGAGCGCCGCCCAGACCTGCTaGTGGGCCATCCGCACCTGCTGCTGCGGGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TRSATSSAAQTC*WAIRTCCCGGP Trigger: GGGGCCCCCGCAGCAGCAGGTGCGGATGGCCCAGCAGCAGGTCTGGGCGGCGCTCGAAGTGGCGCTCCGGGT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS CAA 72 bp | CCGGAGAAAGATCTGAAGCCCGATGCAGAACCGGCTTaGGCTGGAATCGTAGTAGGAGTTGAAGATGGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PEKDLKPDAEPA*AGIVVGVEDGV Trigger: GACGCCATCTTCAACTCCTACTACGATTCCAGCCAAAGCCGGTTCTGCATCGGGCTTCAGATCTTTCTCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
||
| CDS CAA 90 bp | ACCAAGGAGCCGGAGAAAGATCTGAAGCCCGATGCAGAACCGGCTTaGGCTGGAATCGTAGTAGGAGTTGAAGATGGCGTCGATGATGTA | + |
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Preference number: 6 (lower is better) Translates to: TKEPEKDLKPDAEPA*AGIVVGVEDGVDDV Trigger: TACATCATCGACGCCATCTTCAACTCCTACTACGATTCCAGCCAAAGCCGGTTCTGCATCGGGCTTCAGATCTTTCTCCGGCTCCTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS TCA 72 bp | GGGCCCTTTCCGAGGAAGCAACTCGATTCCAAACGCTaGCGTGTTGTAGGCACCATAGAAGTCAATGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GPFPRKQLDSKR*RVVGTIEVNVQ Trigger: TTGCACATTGACTTCTATGGTGCCTACAACACGTCAGCGTTTGGAATCGAGTTGCTTCCTCGGAAAGGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS GCA 72 bp | TGCAGTAATGTGACATATCCAATTCCAAAGGTTAGCTaGAGAACGATGAGTGCCATCCACAGTGAGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: CSNVTYPIPKVS*RTMSAIHSEGP Trigger: AGGGCCCTCACTGTGGATGGCACTCATCGTTCTGCAGCTAACCTTTGGAATTGGATATGTCACATTACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS TCA 72 bp | GAAAGTGTCTATGGAAAGATGACACATGGGAGGCACTaGGCGACATTAATACAGGGTCTGTCATCCCATGGA | + |
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Preference number: 6 (lower is better) Translates to: ESVYGKMTHGRH*ATLIQGLSSHG Trigger: TCCATGGGATGACAGACCCTGTATTAATGTCGCTCAGTGCCTCCCATGTGTCATCTTTCCATAGACACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS CCA 72 bp | AACAGCACAGGAAAGTGTCTATGGAAAGATGACACATaGGAGGCACTGAGCGACATTAATACAGGGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: NSTGKCLWKDDT*EALSDINTGSV Trigger: GACAGACCCTGTATTAATGTCGCTCAGTGCCTCCCATGTGTCATCTTTCCATAGACACTTTCCTGTGCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS CCA 72 bp | GCACTGAGCGACATTAATACAGGGTCTGTCATCCCATaGATGAAATGCAGGACTGCAGTTAATAAAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ALSDINTGSVIP*MKCRTAVNKRH Trigger: GTGCCTTTTATTAACTGCAGTCCTGCATTTCATCCATGGGATGACAGACCCTGTATTAATGTCGCTCAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS CAA 72 bp | GATGTACACTTTCTGATGGCACATTGGACAAGTATCTaGAATGTACAGCCATTTCCGAAGGCAGAGTGCATG | + |
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Preference number: 6 (lower is better) Translates to: DVHFLMAHWTSI*NVQPFPKAECM Trigger: CATGCACTCTGCCTTCGGAAATGGCTGTACATTCAAGATACTTGTCCAATGTGCCATCAGAAAGTGTACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS CCA 72 bp | TACAAGCCCGAATTTTACTTCCTGACTCAAACATCATaGTATAGGCCCCATTCCCAAACATTACTACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: YKPEFYFLTQTS*YRPHSQTLLLQ Trigger: TTGGAGTAGTAATGTTTGGGAATGGGGCCTATACCATGATGTTTGAGTCAGGAAGTAAAATTCGGGCTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS CAA 90 bp | GCCTCCTCTGGGTTTGGATTTTCATTGGGTGCAATAAATCCGTTGTaGTTAGATGCATTTGAGTTATCCTTGATCTCATCTTCGATGTAC | + |
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Preference number: 6 (lower is better) Translates to: ASSGFGFSLGAINPL*LDAFELSLISSSMY Trigger: GTACATCGAAGATGAGATCAAGGATAACTCAAATGCATCTAACAACAACGGATTTATTGCACCCAATGAAAATCCAAACCCAGAGGAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS CAA 90 bp | AAAGCCTCCTCTGGGTTTGGATTTTCATTGGGTGCAATAAATCCGTaGTTGTTAGATGCATTTGAGTTATCCTTGATCTCATCTTCGATG | + |
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Preference number: 6 (lower is better) Translates to: KASSGFGFSLGAINP*LLDAFELSLISSSM Trigger: CATCGAAGATGAGATCAAGGATAACTCAAATGCATCTAACAACAACGGATTTATTGCACCCAATGAAAATCCAAACCCAGAGGAGGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS GCA 72 bp | GACATTAATACAGGGTCTGTCATCCCATGGATGAAATaGAGGACTGCAGTTAATAAAAGGCACATGTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: DINTGSVIPWMK*RTAVNKRHMFL Trigger: TAGAAACATGTGCCTTTTATTAACTGCAGTCCTGCATTTCATCCATGGGATGACAGACCCTGTATTAATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS CAA 72 bp | TGTGCAAAGCAGCATAGTAATTCACCAACACTGAAGTaGCAGCTAATAGAAAGGCTGAGCTGTACATGTAAA | + |
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Preference number: 6 (lower is better) Translates to: CAKQHSNSPTLK*QLIERLSCTCK Trigger: TTTACATGTACAGCTCAGCCTTTCTATTAGCTGCAACTTCAGTGTTGGTGAATTACTATGCTGCTTTGCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS TCA 72 bp | TTAACTGTGAATAGATGGACTGAATCTGCAGTAATGTaGCATATCCAATTCCAAAGGTTAGCTGCAGAACGA | + |
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Preference number: 6 (lower is better) Translates to: LTVNRWTESAVM*HIQFQRLAAER Trigger: TCGTTCTGCAGCTAACCTTTGGAATTGGATATGTCACATTACTGCAGATTCAGTCCATCTATTCACAGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS TCA 72 bp | AATAATGGTTACACGGTGTTATACGAGCAGATGTTGTaGACTCATGATAGCAGATTGCACAGACATCATCTA | + |
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Preference number: 6 (lower is better) Translates to: NNGYTVLYEQML*THDSRLHRHHL Trigger: TAGATGATGTCTGTGCAATCTGCTATCATGAGTTCACAACATCTGCTCGTATAACACCGTGTAACCATTATT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS CAA 90 bp | ATGCCTAGTACAGTTAGTGTAGAATCACACCCACTAATTATTAGATaGCAAATGACGTCCCAGAAATCATCCCAAGAAATAAAGAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: MPSTVSVESHPLIIR*QMTSQKSSQEIKKD Trigger: GTCCTTCTTTATTTCTTGGGATGATTTCTGGGACGTCATTTGCAATCTAATAATTAGTGGGTGTGATTCTACACTAACTGTACTAGGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS CAA 72 bp | GGGTTTGGATTTTCATTGGGTGCAATAAATCCGTTGTaGTTAGATGCATTTGAGTTATCCTTGATCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: GFGFSLGAINPL*LDAFELSLISS Trigger: AGATGAGATCAAGGATAACTCAAATGCATCTAACAACAACGGATTTATTGCACCCAATGAAAATCCAAACCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS CAA 72 bp | TCTGGGTTTGGATTTTCATTGGGTGCAATAAATCCGTaGTTGTTAGATGCATTTGAGTTATCCTTGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: SGFGFSLGAINP*LLDAFELSLIS Trigger: TGAGATCAAGGATAACTCAAATGCATCTAACAACAACGGATTTATTGCACCCAATGAAAATCCAAACCCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS TCA 72 bp | ATTGGGTGCAATAAATCCGTTGTTGTTAGATGCATTTaGGTTATCCTTGATCTCATCTTCGATGTACACTTT | + |
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Preference number: 6 (lower is better) Translates to: IGCNKSVVVRCI*VILDLIFDVHF Trigger: AAAGTGTACATCGAAGATGAGATCAAGGATAACTCAAATGCATCTAACAACAACGGATTTATTGCACCCAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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| CDS CAA 72 bp | ACAGTTAGTGTAGAATCACACCCACTAATTATTAGATaGCAAATGACGTCCCAGAAATCATCCCAAGAAATA | + |
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Preference number: 6 (lower is better) Translates to: TVSVESHPLIIR*QMTSQKSSQEI Trigger: TATTTCTTGGGATGATTTCTGGGACGTCATTTGCAATCTAATAATTAGTGGGTGTGATTCTACACTAACTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036904.7 |
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