Pregenerated sensors for RNF133 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051956

Ensembl transcript IDs: ENSMUST00000063548.4, ENSMUST00000115354.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCTGCTTCGGGAGGCTGGCTGCCAGCGTTCGCAGAAGAAGTAGGGTaGTCCTGCACGTGGGTCACTTTACTTGAAGTTCTTGCAGGAGGA	+
Preference number: 5 (lower is better) Translates to: SASGGWLPAFAEEVG*SCTWVTLLEVLAGG Trigger: TCCTCCTGCAAGAACTTCAAGTAAAGTGACCCACGTGCAGGAGCACCCTACTTCTTCTGCGAACGCTGGCAGCCAGCCTCCCGAAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS CCA 72 bp	CTGGTGGCACAACAACTCCTGCTACTCTCTTCAAGATaGAGCTTCTTCCGAAGACCCCGGTCTCCCCCAGCT	+
Preference number: 6 (lower is better) Translates to: LVAQQLLLLSSR*SFFRRPRSPPA Trigger: AGCTGGGGGAGACCGGGGTCTTCGGAAGAAGCTCCATCTTGAAGAGAGTAGCAGGAGTTGTTGTGCCACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS GCA 72 bp	GGAGGCTGGCTGCCAGCGTTCGCAGAAGAAGTAGGGTaGTCCTGCACGTGGGTCACTTTACTTGAAGTTCTT	+
Preference number: 6 (lower is better) Translates to: GGWLPAFAEEVG*SCTWVTLLEVL Trigger: AAGAACTTCAAGTAAAGTGACCCACGTGCAGGAGCACCCTACTTCTTCTGCGAACGCTGGCAGCCAGCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS CCA 72 bp	CCAGCGTTCGCAGAAGAAGTAGGGTGCTCCTGCACGTaGGTCACTTTACTTGAAGTTCTTGCAGGAGGAAGC	+
Preference number: 6 (lower is better) Translates to: PAFAEEVGCSCT*VTLLEVLAGGS Trigger: GCTTCCTCCTGCAAGAACTTCAAGTAAAGTGACCCACGTGCAGGAGCACCCTACTTCTTCTGCGAACGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS TCA 72 bp	GTCTCCCCCAGCTCTGACAGCATGCGGTTCCCCACATaGAATGATATGTTCATGTACGCAGTCCAAACTGCA	+
Preference number: 6 (lower is better) Translates to: VSPSSDSMRFPT*NDMFMYAVQTA Trigger: TGCAGTTTGGACTGCGTACATGAACATATCATTTCATGTGGGGAACCGCATGCTGTCAGAGCTGGGGGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS GCA 72 bp	TTTCTGTGTGAAGGCACAACCTCCCCGTTCAATGAGTaGGATCCAGGGCTCTTTGTTCCGTGGCAGGATAAA	+
Preference number: 6 (lower is better) Translates to: FLCEGTTSPFNE*DPGLFVPWQDK Trigger: TTTATCCTGCCACGGAACAAAGAGCCCTGGATCGCACTCATTGAACGGGGAGGTTGTGCCTTCACACAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS TCA 72 bp	CCAATCATAACTACAACGATGTCTTCAAACGCCTGGTaGGACATGGGGAAAACCTGGTTGCCAGTACCTGGG	+
Preference number: 6 (lower is better) Translates to: PIITTTMSSNAW*DMGKTWLPVPG Trigger: CCCAGGTACTGGCAACCAGGTTTTCCCCATGTCTCACCAGGCGTTTGAAGACATCGTTGTAGTTATGATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS CAA 72 bp	CTTCTTCCACGGGTGACAAGGTTCCGGGCAATTCATTaGACATCAGAACTTGCAGAGAGTCTGTCCCATCCT	+
Preference number: 6 (lower is better) Translates to: LLPRVTRFRAIH*TSELAESLSHP Trigger: AGGATGGGACAGACTCTCTGCAAGTTCTGATGTCAAATGAATTGCCCGGAACCTTGTCACCCGTGGAAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS CCA 72 bp	CCGTTCAATGAGTGCGATCCAGGGCTCTTTGTTCCGTaGCAGGATAAAAGTGGTATTGGGATCACAAGCATT	+
Preference number: 6 (lower is better) Translates to: PFNECDPGLFVP*QDKSGIGITSI Trigger: AATGCTTGTGATCCCAATACCACTTTTATCCTGCCACGGAACAAAGAGCCCTGGATCGCACTCATTGAACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS GCA 72 bp	ATTTTGAATTTTTCCCTCTGGTGGCACAACAACTCCTaGTACTCTCTTCAAGATGGAGCTTCTTCCGAAGAC	+
Preference number: 6 (lower is better) Translates to: ILNFSLWWHNNS*YSLQDGASSED Trigger: GTCTTCGGAAGAAGCTCCATCTTGAAGAGAGTAGCAGGAGTTGTTGTGCCACCAGAGGGAAAAATTCAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS CCA 72 bp	ATTGGGATCACAAGCATTTTGAATTTTTCCCTCTGGTaGCACAACAACTCCTGCTACTCTCTTCAAGATGGA	+
Preference number: 6 (lower is better) Translates to: IGITSILNFSLW*HNNSCYSLQDG Trigger: TCCATCTTGAAGAGAGTAGCAGGAGTTGTTGTGCCACCAGAGGGAAAAATTCAAAATGCTTGTGATCCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS CAA 72 bp	TTTAATACTCGAACTTGCAGCTGCCCAAAAGCTTTCTaGAGCTCTCTTGTTAATCGCTTCCATCTCCTGTTC	+
Preference number: 6 (lower is better) Translates to: FNTRTCSCPKAF*SSLVNRFHLLF Trigger: GAACAGGAGATGGAAGCGATTAACAAGAGAGCTCAAGAAAGCTTTTGGGCAGCTGCAAGTTCGAGTATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063548.4 ENSMUST00000115354.2
CDS CAA 72 bp	ACTCCCTTCCGAATTAAATGCAAAATCTCCATACCTTaGATGTTACCAATCATAACTACAACGATGTCTTCA	+
Preference number: 6 (lower is better) Translates to: TPFRIKCKISIP*MLPIITTTMSS Trigger: TGAAGACATCGTTGTAGTTATGATTGGTAACATCAAAGGTATGGAGATTTTGCATTTAATTCGGAAGGGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115354.2