Pregenerated sensors for RNF130 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020376Ensembl transcript IDs: ENSMUST00000054684.14, ENSMUST00000102776.5, ENSMUST00000238748.2
Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGGCTGCACTCTTCCCTTCCACCCGTGCCCAGGGAACTGTCCCCTTaGGGCTCACCCTCATCTCACCTGCTCTCCCTCCGCAGAGTGCTG | + |
Preference number: 1 (lower is better) Translates to: RLHSSLPPVPRELSP*GSPSSHLLSLRRVL Trigger: CAGCACTCTGCGGAGGGAGAGCAGGTGAGATGAGGGTGAGCCTCAAGGGGACAGTTCCCTGGGCACGGGTGGAAGGGAAGAGTGCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | TGCACAGCGTCCCTCTCATCCCTCCAGGTGTCCCACCTTGCCGTCTaGCTAAGGCATGTTCTGAGCTTCCTCACCCCAAGTTACCTGTGC | + |
Preference number: 1 (lower is better) Translates to: CTASLSSLQVSHLAV*LRHVLSFLTPSYLC Trigger: GCACAGGTAACTTGGGGTGAGGAAGCTCAGAACATGCCTTAGGCAGACGGCAAGGTGGGACACCTGGAGGGATGAGAGGGACGCTGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 90 bp | CCCAAACAGACCCTAGAGCTTCCCTGGGCCCAGAAGCGGAGATGGTaGCTTCAGCCCAAGGAACCTGCCTTACTCCTGTTGCTCCTCATG | + |
Preference number: 1 (lower is better) Translates to: PKQTLELPWAQKRRW*LQPKEPALLLLLLM Trigger: CATGAGGAGCAACAGGAGTAAGGCAGGTTCCTTGGGCTGAAGTCACCATCTCCGCTTCTGGGCCCAGGGAAGCTCTAGGGTCTGTTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | TCCGCAGAGTGCTGCCAACATGCCAGTTTCCAGGACAGTCAAATATaGCCAACCACTGAAGGGCTTGAGTGCCGAGATGCACCCCCAGCC | + |
Preference number: 1 (lower is better) Translates to: SAECCQHASFQDSQI*PTTEGLECRDAPPA Trigger: GGCTGGGGGTGCATCTCGGCACTCAAGCCCTTCAGTGGTTGGGCATATTTGACTGTCCTGGAAACTGGCATGTTGGCAGCACTCTGCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | GGTCCCAAGCCAACCGCTAGGATACCAGCCCCAGCAGGGCCCATCTaGCTTCTGCCTCTCACACAGCCTGCAGCTTATAGTGTTCTTTTC | + |
Preference number: 1 (lower is better) Translates to: GPKPTARIPAPAGPI*LLPLTQPAAYSVLF Trigger: GAAAAGAACACTATAAGCTGCAGGCTGTGTGAGAGGCAGAAGGCAGATGGGCCCTGCTGGGGCTGGTATCCTAGCGGTTGGCTTGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | AGTCCAGTGCACAGCGTCCCTCTCATCCCTCCAGGTGTCCCACCTTaGCGTCTGCCTAAGGCATGTTCTGAGCTTCCTCACCCCAAGTTA | + |
Preference number: 1 (lower is better) Translates to: SPVHSVPLIPPGVPP*RLPKACSELPHPKL Trigger: TAACTTGGGGTGAGGAAGCTCAGAACATGCCTTAGGCAGACGGCAAGGTGGGACACCTGGAGGGATGAGAGGGACGCTGTGCACTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 90 bp | ACAGCAAGGCTCCTGAGGTGCCCATGCTCAGTGGTCAGCTCTGGGTaGTACCACGAGGCTCACTCGCGCAATAATGCTGCCATCAAACCT | + |
Preference number: 1 (lower is better) Translates to: TARLLRCPCSVVSSG*YHEAHSRNNAAIKP Trigger: AGGTTTGATGGCAGCATTATTGCGCGAGTGAGCCTCGTGGTACCACCCAGAGCTGACCACTGAGCATGGGCACCTCAGGAGCCTTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 90 bp | TGGTACCTAGCCCAGTTTCTCTCTGGCTGGCACCATCATTGGCACTaGGCATCTACTTCTGTCAGGGTGTGCATGCGCGCCCAGTGCACA | + |
Preference number: 1 (lower is better) Translates to: WYLAQFLSGWHHHWH*ASTSVRVCMRAQCT Trigger: TGTGCACTGGGCGCGCATGCACACCCTGACAGAAGTAGATGCTCAGTGCCAATGATGGTGCCAGCCAGAGAGAAACTGGGCTAGGTACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 90 bp | CCTCGGGAGAGGAGTGAGGATGTGAGGGAGGTGCTAACGGCTGGGTaGGGGCTCCACCAAGGCCTGAGAAAGATTCTACTTTTAGGCTGT | + |
Preference number: 1 (lower is better) Translates to: PRERSEDVREVLTAG*GLHQGLRKILLLGC Trigger: ACAGCCTAAAAGTAGAATCTTTCTCAGGCCTTGGTGGAGCCCTCACCCAGCCGTTAGCACCTCCCTCACATCCTCACTCCTCTCCCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | AGCTTTCTGGGAATACCCATAAAGAAGGGAGGAGCCCACCAACCCTaGCAGAGCCCAGGAGTTCCTTGGCTACAAAGGGGCTTCCTGACC | + |
Preference number: 1 (lower is better) Translates to: SFLGIPIKKGGAHQP*QSPGVPWLQRGFLT Trigger: GGTCAGGAAGCCCCTTTGTAGCCAAGGAACTCCTGGGCTCTGGCAGGGTTGGTGGGCTCCTCCCTTCTTTATGGGTATTCCCAGAAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 90 bp | TGTATTCTAGCTGGGTCAGCAAGCCAGCCAGGGCTGTCAGGGAGGTaGCATGTGCTGTGGCTGCCCCTAAAAGGTCTAGGTGTAGAACCA | + |
Preference number: 1 (lower is better) Translates to: CILAGSASQPGLSGR*HVLWLPLKGLGVEP Trigger: TGGTTCTACACCTAGACCTTTTAGGGGCAGCCACAGCACATGCCACCTCCCTGACAGCCCTGGCTGGCTTGCTGACCCAGCTAGAATACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | CTTGAGGCTCACCCTCATCTCACCTGCTCTCCCTCCGCAGAGTGCTaGCAACATGCCAGTTTCCAGGACAGTCAAATATGCCCAACCACT | + |
Preference number: 1 (lower is better) Translates to: LEAHPHLTCSPSAEC*QHASFQDSQICPTT Trigger: AGTGGTTGGGCATATTTGACTGTCCTGGAAACTGGCATGTTGGCAGCACTCTGCGGAGGGAGAGCAGGTGAGATGAGGGTGAGCCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | AGCCAACCGCTAGGATACCAGCCCCAGCAGGGCCCATCTGCCTTCTaGCTCTCACACAGCCTGCAGCTTATAGTGTTCTTTTCCCAAACA | + |
Preference number: 1 (lower is better) Translates to: SQPLGYQPQQGPSAF*LSHSLQLIVFFSQT Trigger: TGTTTGGGAAAAGAACACTATAAGCTGCAGGCTGTGTGAGAGGCAGAAGGCAGATGGGCCCTGCTGGGGCTGGTATCCTAGCGGTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | AGTGTCCACCATGCTGGCCACAGCATCCTCTTCTGTAAGTCTGGTTaGCAGCGCTCCAGTGTTTCTTTCATGTTGGTGCTGAGGCTGGCA | + |
Preference number: 1 (lower is better) Translates to: SVHHAGHSILFCKSG*QRSSVSFMLVLRLA Trigger: TGCCAGCCTCAGCACCAACATGAAAGAAACACTGGAGCGCTGGCAACCAGACTTACAGAAGAGGATGCTGTGGCCAGCATGGTGGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | CAAGGAGTCTGCAAGAGCAGCTTTCCCAACTACTTTGCTTTCCCCTaGTGTTTCCAGGAACACCAGGCAAGCAAGGTCCTAACACAGGCA | + |
Preference number: 1 (lower is better) Translates to: QGVCKSSFPNYFAFP*CFQEHQASKVLTQA Trigger: TGCCTGTGTTAGGACCTTGCTTGCCTGGTGTTCCTGGAAACAGCAGGGGAAAGCAAAGTAGTTGGGAAAGCTGCTCTTGCAGACTCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 90 bp | GTCTCTCGTGCCTCAGAGCAGATGAGAAGTAGAGGCTCAGCTTCATaGTGGATTGGCTTTCAGGGATGTGTCTTACGAGGGAACAACCAG | + |
Preference number: 1 (lower is better) Translates to: VSRASEQMRSRGSAS*WIGFQGCVLRGNNQ Trigger: CTGGTTGTTCCCTCGTAAGACACATCCCTGAAAGCCAATCCATCATGAAGCTGAGCCTCTACTTCTCATCTGCTCTGAGGCACGAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 90 bp | TCCAGTGTTTCTTTCATGTTGGTGCTGAGGCTGGCAGGATGGCACTaGATTGGACAATCAAGATGGAGAAGGAGGAGGCCCCATTTGGTA | + |
Preference number: 1 (lower is better) Translates to: SSVSFMLVLRLAGWH*IGQSRWRRRRPHLV Trigger: TACCAAATGGGGCCTCCTCCTTCTCCATCTTGATTGTCCAATCCAGTGCCATCCTGCCAGCCTCAGCACCAACATGAAAGAAACACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 90 bp | CAGGCCAGTCAGCTGTCCTTTCTCCCTGAAGTAATGGGACCAGAGTaGCCCCTCCACAAGGAAGCTAAATATCTCAAAGGCTTAAACCTC | + |
Preference number: 1 (lower is better) Translates to: QASQLSFLPEVMGPE*PLHKEAKYLKGLNL Trigger: GAGGTTTAAGCCTTTGAGATATTTAGCTTCCTTGTGGAGGGGCCACTCTGGTCCCATTACTTCAGGGAGAAAGGACAGCTGACTGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 90 bp | GAGGGGAACAAAGGTGGGACCCTGGATGGATACATTCATTACTTCTaGAGACACTCTGGGGACTTTATACCTGGATGTCCAGGCCAGTCA | + |
Preference number: 1 (lower is better) Translates to: EGNKGGTLDGYIHYF*RHSGDFIPGCPGQS Trigger: TGACTGGCCTGGACATCCAGGTATAAAGTCCCCAGAGTGTCTCCAGAAGTAATGAATGTATCCATCCAGGGTCCCACCTTTGTTCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 90 bp | TCAGGAGAAGGGGGTCAACTTGGATATCTGGAGAGCTATTCTGAGTaGATCCCTTCACAGGAACTGCCTCCTTGGCTGTTCTACAGTGAC | + |
Preference number: 1 (lower is better) Translates to: SGEGGQLGYLESYSE*IPSQELPPWLFYSD Trigger: GTCACTGTAGAACAGCCAAGGAGGCAGTTCCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCCTTCTCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | CAGATAGATACAAGGAGTCTGCAAGAGCAGCTTTCCCAACTACTTTaGTTTCCCCTGCTGTTTCCAGGAACACCAGGCAAGCAAGGTCCT | + |
Preference number: 1 (lower is better) Translates to: QIDTRSLQEQLSQLL*FPLLFPGTPGKQGP Trigger: AGGACCTTGCTTGCCTGGTGTTCCTGGAAACAGCAGGGGAAAGCAAAGTAGTTGGGAAAGCTGCTCTTGCAGACTCCTTGTATCTATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | GTGGGCTTGTGGGTGGCCAACATGTTCCTTCCAGGTGCATGTACCTaGTCAGAAAGTGGAGTTGAGATGGAGAGAAATGACATATGTCAG | + |
Preference number: 1 (lower is better) Translates to: VGLWVANMFLPGACT*SESGVEMERNDICQ Trigger: CTGACATATGTCATTTCTCTCCATCTCAACTCCACTTTCTGAGCAGGTACATGCACCTGGAAGGAACATGTTGGCCACCCACAAGCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 90 bp | ATGGTAGAGCCTGGCTTTCCCAAGAGGGGAACAAAGGTGGGACCCTaGATGGATACATTCATTACTTCTGGAGACACTCTGGGGACTTTA | + |
Preference number: 1 (lower is better) Translates to: MVEPGFPKRGTKVGP*MDTFITSGDTLGTL Trigger: TAAAGTCCCCAGAGTGTCTCCAGAAGTAATGAATGTATCCATCCAGGGTCCCACCTTTGTTCCCCTCTTGGGAAAGCCAGGCTCTACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 90 bp | CCTACAGTGAAGTCGCACATTGCATCAATGAGCACTCTTGCTATCTaGATACTTGATGTGTGCTCCTTCTGCCGCAAACCACCCACTGGT | + |
Preference number: 1 (lower is better) Translates to: PTVKSHIASMSTLAI*ILDVCSFCRKPPTG Trigger: ACCAGTGGGTGGTTTGCGGCAGAAGGAGCACACATCAAGTATTCAGATAGCAAGAGTGCTCATTGATGCAATGTGCGACTTCACTGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | CAGGGGCACCTGAGGCATCTTAGGATCTTGAGGGATGTTACAAGATaGTGTGACAGAGAAGAAGCCACACGTGGGAAGATGAAATGTATG | + |
Preference number: 1 (lower is better) Translates to: QGHLRHLRILRDVTR*CDREEATRGKMKCM Trigger: CATACATTTCATCTTCCCACGTGTGGCTTCTTCTCTGTCACAGCATCTTGTAACATCCCTCAAGATCCTAAGATGCCTCAGGTGCCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | TTGGATATCTGGAGAGCTATTCTGAGTGAATCCCTTCACAGGAACTaGCTCCTTGGCTGTTCTACAGTGACCACGTGTCCCAGTTTTTCC | + |
Preference number: 1 (lower is better) Translates to: LDIWRAILSESLHRN*LLGCSTVTTCPSFS Trigger: GGAAAAACTGGGACACGTGGTCACTGTAGAACAGCCAAGGAGGCAGTTCCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 90 bp | TTGGTGCTGAGGCTGGCAGGATGGCACTGGATTGGACAATCAAGATaGAGAAGGAGGAGGCCCCATTTGGTATTTAATAGTAGGATGTTG | + |
Preference number: 1 (lower is better) Translates to: LVLRLAGWHWIGQSR*RRRRPHLVFNSRML Trigger: CAACATCCTACTATTAAATACCAAATGGGGCCTCCTCCTTCTCCATCTTGATTGTCCAATCCAGTGCCATCCTGCCAGCCTCAGCACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 90 bp | CAGCTCTGGAAAACACAGGTGACTGTTTTTATCCCAGGGCTCACCTaGCCTGTCCTCATCAAAGGTCAGCTTTCTGGGAATACCCATAAA | + |
Preference number: 1 (lower is better) Translates to: QLWKTQVTVFIPGLT*PVLIKGQLSGNTHK Trigger: TTTATGGGTATTCCCAGAAAGCTGACCTTTGATGAGGACAGGCCAGGTGAGCCCTGGGATAAAAACAGTCACCTGTGTTTTCCAGAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 90 bp | ATTTTCAGGAGAAGGGGGTCAACTTGGATATCTGGAGAGCTATTCTaGGTGAATCCCTTCACAGGAACTGCCTCCTTGGCTGTTCTACAG | + |
Preference number: 1 (lower is better) Translates to: IFRRRGSTWISGELF*VNPFTGTASLAVLQ Trigger: CTGTAGAACAGCCAAGGAGGCAGTTCCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCCTTCTCCTGAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 90 bp | CCAGTTAGTAAGTCAGGGTCAGCAACCTTTGCTTTAATGCCTTTCTaGCCACATATTTTGGCATCTCAGTCTCTCGTGCCTCAGAGCAGA | + |
Preference number: 1 (lower is better) Translates to: PVSKSGSATFALMPF*PHILASQSLVPQSR Trigger: TCTGCTCTGAGGCACGAGAGACTGAGATGCCAAAATATGTGGTCAGAAAGGCATTAAAGCAAAGGTTGCTGACCCTGACTTACTAACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 90 bp | AAGGTGCTTGTTTTAAGCTGTGGGTATCAAGACAGTCGCCCTGTGTaGATGATTCCTTATTCTCACCTCCTCACGCTGCCTCTGAGTTTA | + |
Preference number: 1 (lower is better) Translates to: KVLVLSCGYQDSRPV*MIPYSHLLTLPLSL Trigger: TAAACTCAGAGGCAGCGTGAGGAGGTGAGAATAAGGAATCATTCACACAGGGCGACTGTCTTGATACCCACAGCTTAAAACAAGCACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | CACAATCATTTCTCTACATCAGAGTCTCCAATAGCCTTTTCTGTGTaGTGTACATCCCAGTCAGTGGTACCTAGCCCAGTTTCTCTCTGG | + |
Preference number: 1 (lower is better) Translates to: HNHFSTSESPIAFSV*CTSQSVVPSPVSLW Trigger: CCAGAGAGAAACTGGGCTAGGTACCACTGACTGGGATGTACAGCACACAGAAAAGGCTATTGGAGACTCTGATGTAGAGAAATGATTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 90 bp | TGTTCCTTCCAGGTGCATGTACCTGCTCAGAAAGTGGAGTTGAGATaGAGAGAAATGACATATGTCAGCATCAAATGTTTTGGGGATGCT | + |
Preference number: 1 (lower is better) Translates to: CSFQVHVPAQKVELR*REMTYVSIKCFGDA Trigger: AGCATCCCCAAAACATTTGATGCTGACATATGTCATTTCTCTCCATCTCAACTCCACTTTCTGAGCAGGTACATGCACCTGGAAGGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 90 bp | GGCACTGGATTGGACAATCAAGATGGAGAAGGAGGAGGCCCCATTTaGTATTTAATAGTAGGATGTTGGTTTGCACTTCCCAATAAAACA | + |
Preference number: 1 (lower is better) Translates to: GTGLDNQDGEGGGPI*YLIVGCWFALPNKT Trigger: TGTTTTATTGGGAAGTGCAAACCAACATCCTACTATTAAATACCAAATGGGGCCTCCTCCTTCTCCATCTTGATTGTCCAATCCAGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 90 bp | CCAGTTTTAAGTTCAGCCGTTTACTTTCTTGACATTTATGAGCAGTaGGCCCTTGTTAGGAAGACCCCTGATGTGAAATCACAGTCTTGT | + |
Preference number: 1 (lower is better) Translates to: PVLSSAVYFLDIYEQ*ALVRKTPDVKSQSC Trigger: ACAAGACTGTGATTTCACATCAGGGGTCTTCCTAACAAGGGCTCACTGCTCATAAATGTCAAGAAAGTAAACGGCTGAACTTAAAACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 90 bp | GCAAATTCCACACATACAGGTGTACACTATTGGCATAGAGGTTCATaGCAGACAATTTCACTACTTAATTATACTTACATCAACCATGTG | + |
Preference number: 1 (lower is better) Translates to: ANSTHTGVHYWHRGS*QTISLLNYTYINHV Trigger: CACATGGTTGATGTAAGTATAATTAAGTAGTGAAATTGTCTGGCATGAACCTCTATGCCAATAGTGTACACCTGTATGTGTGGAATTTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 90 bp | GAAACGGTTATATTAGCAAATTCCACACATACAGGTGTACACTATTaGCATAGAGGTTCATGCCAGACAATTTCACTACTTAATTATACT | + |
Preference number: 1 (lower is better) Translates to: ETVILANSTHTGVHY*HRGSCQTISLLNYT Trigger: AGTATAATTAAGTAGTGAAATTGTCTGGCATGAACCTCTATGCCAATAGTGTACACCTGTATGTGTGGAATTTGCTAATATAACCGTTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | CGTCTCTACCCAGACTTGGTAGGCTGCACTCTTCCCTTCCACCCGTGCCCAGGGCTTTCATGTTGGTGCTaGGGCTGGCAGGATGGCACT | + |
Preference number: 2 (lower is better) Translates to: RLYPDLVGCTLPFHPCPGLSCWC*GWQDGT Trigger: AGTGCCATCCTGCCAGCCTCAGCACCAACATGAAAG...CCCTGGGCACGGGTGGAAGGGAAGAGTGCAGCCTACCAAGTCTGGGTAGAGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGCACCTCTCACAGGGCTaGGGAGGGGAAGACGCAGGG | + |
Preference number: 2 (lower is better) Translates to: DVTCKYWNLQRAEGTASQHLSQG*GGEDAG Trigger: CCCTGCGTCTTCCCCTCCCCAGCCCTGTGAGAGGTG...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | CGTCTCTACCCAGACTTGGTAGGCTGCACTCTTCCCTTCCACCCGTGCCCAGGGCTCCTGGAAGGAAGCTaGTATCCTCTGTACTCCCAG | + |
Preference number: 2 (lower is better) Translates to: RLYPDLVGCTLPFHPCPGLLEGS*YPLYSQ Trigger: CTGGGAGTACAGAGGATAGCAGCTTCCTTCCAGGAG...CCCTGGGCACGGGTGGAAGGGAAGAGTGCAGCCTACCAAGTCTGGGTAGAGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | CCTCTCATCCCTCCAGGTGTCCCACCTTGCCGTCTGCCTAAGGCATGTTCTGAGCCCTCCGCAGAGTGCTaGCAACATGCCAGTTTCCAG | + |
Preference number: 2 (lower is better) Translates to: PLIPPGVPPCRLPKACSEPSAEC*QHASFQ Trigger: CTGGAAACTGGCATGTTGGCAGCACTCTGCGGAGGG...CTCAGAACATGCCTTAGGCAGACGGCAAGGTGGGACACCTGGAGGGATGAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | CCTCTGTACTCCCAGAGCACATGGCCCCCAACAAAGACGCCAATGACCTTCCGGCGCACCATTAACCGCTaGCCCCACCTCTTCTCTGGA | + |
Preference number: 2 (lower is better) Translates to: PLYSQSTWPPTKTPMTFRRTINR*PHLFSG Trigger: TCCAGAGAAGAGGTGGGGCCAGCGGTTAATGGTGCG...CCGGAAGGTCATTGGCGTCTTTGTTGGGGGCCATGTGCTCTGGGAGTACAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | GAGGAAAGTGTATCGAGCCTAGGAGGACTGCAGGAGGATAATCACAGGAGGAGCCCTGGGTATCCAGGGTaGCTCCGTGGCATGTCCCCT | + |
Preference number: 2 (lower is better) Translates to: EESVSSLGGLQEDNHRRSPGYPG*LRGMSP Trigger: AGGGGACATGCCACGGAGTCACCCTGGATACCCAGG...GCTCCTCCTGTGATTATCCTCCTGCAGTCCTCCTAGGCTCGATACACTTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | CCTCTCATCCCTCCAGGTGTCCCACCTTGCCGTCTGCCTAAGGCATGTTCTGAGCTAAGATGGCAGCTGTaGGCTTGTGGGTGGCCAACA | + |
Preference number: 2 (lower is better) Translates to: PLIPPGVPPCRLPKACSELRWQL*ACGWPT Trigger: TGTTGGCCACCCACAAGCCCACAGCTGCCATCTTAG...CTCAGAACATGCCTTAGGCAGACGGCAAGGTGGGACACCTGGAGGGATGAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | CCTCTCATCCCTCCAGGTGTCCCACCTTGCCGTCTGCCTAAGGCATGTTCTGAGCCAATAAAAGTGTCATaGTGGGAGCCTGTCCCCCTC | + |
Preference number: 2 (lower is better) Translates to: PLIPPGVPPCRLPKACSEPIKVS*WEPVPL Trigger: GAGGGGGACAGGCTCCCATCATGACACTTTTATTGG...CTCAGAACATGCCTTAGGCAGACGGCAAGGTGGGACACCTGGAGGGATGAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | GAGCACATGGCCCCCAACAAAGACGCCAATGACCTTCCGGACAAAGACAGGACACCAAACACTTCCACCTaGGCCTGTGACCCTGGGAGT | + |
Preference number: 2 (lower is better) Translates to: EHMAPNKDANDLPDKDRTPNTST*ACDPGS Trigger: ACTCCCAGGGTCACAGGCTCAGGTGGAAGTGTTTGG...TGTCCTGTCTTTGTCCGGAAGGTCATTGGCGTCTTTGTTGGGGGCCATGTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | CGTCTCTACCCAGACTTGGTAGGCTGCACTCTTCCCTTCCACCCGTGCCCAGGGCCTCTCAAGTCTTCATaGCTACTCTGTCTTCACTCC | + |
Preference number: 2 (lower is better) Translates to: RLYPDLVGCTLPFHPCPGPLKSS*LLCLHS Trigger: GGAGTGAAGACAGAGTAGTCATGAAGACTTGAGAGG...CCCTGGGCACGGGTGGAAGGGAAGAGTGCAGCCTACCAAGTCTGGGTAGAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | AAGCAAGGTCCTAACACAGGCACCTCAGTCCCAGCATTCCTTCTGGTCCTTTTCAGACTCTGGGCCCCATaGCCTGTGTCCTCCCAGCTC | + |
Preference number: 2 (lower is better) Translates to: KQGPNTGTSVPAFLLVLFRLWAP*PVSSQL Trigger: GAGCTGGGAGGACACAGGCCATGGGGCCCAGAGTCT...GAAAAGGACCAGAAGGAATGCTGGGACTGAGGTGCCTGTGTTAGGACCTTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | CGTCTCTACCCAGACTTGGTAGGCTGCACTCTTCCCTTCCACCCGTGCCCAGGGCCTTATCATAGCTCCTaGAAGGAAGCTGCTATCCTC | + |
Preference number: 2 (lower is better) Translates to: RLYPDLVGCTLPFHPCPGPYHSS*KEAAIL Trigger: GAGGATAGCAGCTTCCTTCCAGGAGCTATGATAAGG...CCCTGGGCACGGGTGGAAGGGAAGAGTGCAGCCTACCAAGTCTGGGTAGAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | CCTCTGTACTCCCAGAGCACATGGCCCCCAACAAAGACGCCAATGACCTTCCGGGTGGGACTGTTCATCTaGAGGCTTTCCTGTGCATGT | + |
Preference number: 2 (lower is better) Translates to: PLYSQSTWPPTKTPMTFRVGLFI*RLSCAC Trigger: ACATGCACAGGAAAGCCTGCAGATGAACAGTCCCAC...CCGGAAGGTCATTGGCGTCTTTGTTGGGGGCCATGTGCTCTGGGAGTACAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | CGTGCCCAGGGAACTGTCCCCTTGAGGCTCACCCTCATCTCACCTGCTCTCCCTAGGGATGTTACAAGATaGTGTGACAGAGAAGAAGCC | + |
Preference number: 2 (lower is better) Translates to: RAQGTVPLRLTLISPALPRDVTR*CDREEA Trigger: GGCTTCTTCTCTGTCACAGCATCTTGTAACATCCCT...AGGGAGAGCAGGTGAGATGAGGGTGAGCCTCAAGGGGACAGTTCCCTGGGCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | ATACTTGATGTGTGCTCCTTCTGCCGCAAACCACCCACTGGTGAGAGGAAGTCCCCAGACTTGGTAGGCTaGACTCTTCCCTTCCACCCG | + |
Preference number: 2 (lower is better) Translates to: ILDVCSFCRKPPTGERKSPDLVG*TLPFHP Trigger: CGGGTGGAAGGGAAGAGTGCAGCCTACCAAGTCTGG...GGACTTCCTCTCACCAGTGGGTGGTTTGCGGCAGAAGGAGCACACATCAAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | ATACTTGATGTGTGCTCCTTCTGCCGCAAACCACCCACTGGTGAGAGGAAGTCCCTCAGTGGTCAGCTCTaGGTGGTACCACGAGGCTCA | + |
Preference number: 2 (lower is better) Translates to: ILDVCSFCRKPPTGERKSLSGQL*VVPRGS Trigger: TGAGCCTCGTGGTACCACCCAGAGCTGACCACTGAG...GGACTTCCTCTCACCAGTGGGTGGTTTGCGGCAGAAGGAGCACACATCAAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | GCCTCTCAAGTCTTCATGACTACTCTGTCTTCACTCCGGGTGCACCAGTCAGATGTGTCCTCCCAGCTCTaGAGGACAACAGGAGGTCGG | + |
Preference number: 2 (lower is better) Translates to: ASQVFMTTLSSLRVHQSDVSSQL*RTTGGR Trigger: CCGACCTCCTGTTGTCCTCCAGAGCTGGGAGGACAC...ATCTGACTGGTGCACCCGGAGTGAAGACAGAGTAGTCATGAAGACTTGAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | CGTCTCTACCCAGACTTGGTAGGCTGCACTCTTCCCTTCCACCCGTGCCCAGGGAGGATGGCACTGGATTaGACAATCAAGATGGAGAAG | + |
Preference number: 2 (lower is better) Translates to: RLYPDLVGCTLPFHPCPGRMALD*TIKMEK Trigger: CTTCTCCATCTTGATTGTCCAATCCAGTGCCATCCT...CCCTGGGCACGGGTGGAAGGGAAGAGTGCAGCCTACCAAGTCTGGGTAGAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | CCTCTGTACTCCCAGAGCACATGGCCCCCAACAAAGACGCCAATGACCTTCCGGGTCATTCTGGATGTGTaGGAAGAGCACACATGTCCC | + |
Preference number: 2 (lower is better) Translates to: PLYSQSTWPPTKTPMTFRVILDV*EEHTCP Trigger: GGGACATGTGTGCTCTTCCCACACATCCAGAATGAC...CCGGAAGGTCATTGGCGTCTTTGTTGGGGGCCATGTGCTCTGGGAGTACAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGTACTCCCAGAGCACATaGCCCCCAACAAAGACGCCA | + |
Preference number: 2 (lower is better) Translates to: DVTCKYWNLQRAEGTASQYSQST*PPTKTP Trigger: TGGCGTCTTTGTTGGGGGCCATGTGCTCTGGGAGTA...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGGACAAAGCAGATGACTaGTCCTGTGACGGCAGACTC | + |
Preference number: 2 (lower is better) Translates to: DVTCKYWNLQRAEGTASQDKADD*SCDGRL Trigger: GAGTCTGCCGTCACAGGATCAGTCATCTGCTTTGTC...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | GAGGAAAGTGTATCGAGCCTAGGAGGACTGCAGGAGGATAATCACAGGAGGAGCACAGCCCTCCCATTCTaGACACTGGAGGATGAGAGC | + |
Preference number: 2 (lower is better) Translates to: EESVSSLGGLQEDNHRRSTALPF*TLEDES Trigger: GCTCTCATCCTCCAGTGTTCAGAATGGGAGGGCTGT...GCTCCTCCTGTGATTATCCTCCTGCAGTCCTCCTAGGCTCGATACACTTTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | CCTCTCATCCCTCCAGGTGTCCCACCTTGCCGTCTGCCTAAGGCATGTTCTGAGTCTGGAAAACACAGGTaGCTGTTTTTATCCCAGGGC | + |
Preference number: 2 (lower is better) Translates to: PLIPPGVPPCRLPKACSESGKHR*LFLSQG Trigger: GCCCTGGGATAAAAACAGTCACCTGTGTTTTCCAGA...CTCAGAACATGCCTTAGGCAGACGGCAAGGTGGGACACCTGGAGGGATGAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | AGCGGAGATGGTGACTTCAGCCCAAGGAACCTGCCTTACTCCTGTTGCTCCTCACTGACCCCACAGTCTTaGCTTTCCCTTCGAAATGCC | + |
Preference number: 2 (lower is better) Translates to: SGDGDFSPRNLPYSCCSSLTPQS*LSLRNA Trigger: GGCATTTCGAAGGGAAAGGCAAGACTGTGGGGTCAG...TGAGGAGCAACAGGAGTAAGGCAGGTTCCTTGGGCTGAAGTCACCATCTCCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | CCTCTCATCCCTCCAGGTGTCCCACCTTGCCGTCTGCCTAAGGCATGTTCTGAGCTTCTGGAGACACTCTaGGGACTTTATACCTGGATG | + |
Preference number: 2 (lower is better) Translates to: PLIPPGVPPCRLPKACSELLETL*GLYTWM Trigger: CATCCAGGTATAAAGTCCCCAGAGTGTCTCCAGAAG...CTCAGAACATGCCTTAGGCAGACGGCAAGGTGGGACACCTGGAGGGATGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGCTTGATGGTAGAGCCTaGCTTTCCCAAGAGGGGAAC | + |
Preference number: 2 (lower is better) Translates to: DVTCKYWNLQRAEGTASQLDGRA*LSQEGN Trigger: GTTCCCCTCTTGGGAAAGCCAGGCTCTACCATCAAG...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 90 bp | ATCAACCATGTGGACCTAGGAGTTGTGCTGCCCACTTCCAGGGGGTaGACACATCTGACCGTCAAGAAGTCGGCTCACACTGTACGTGAA | + |
Preference number: 2 (lower is better) Translates to: INHVDLGVVLPTSRG*THLTVKKSAHTVRE Trigger: TTCACGTACAGTGTGAGCCGACTTCTTGACGGTCAGATGTGTCAACCCCCTGGAAGTGGGCAGCACAACTCCTAGGTCCACATGGTTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | GAGCACATGGCCCCCAACAAAGACGCCAATGACCTTCCGGACAAAGACAGGACACATGCCCATCACAGATaGAGGAAAGGGACAAAGCAG | + |
Preference number: 2 (lower is better) Translates to: EHMAPNKDANDLPDKDRTHAHHR*RKGTKQ Trigger: CTGCTTTGTCCCTTTCCTGCATCTGTGATGGGCATG...TGTCCTGTCTTTGTCCGGAAGGTCATTGGCGTCTTTGTTGGGGGCCATGTGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | GAGCACATGGCCCCCAACAAAGACGCCAATGACCTTCCGGACAAAGACAGGACATCCCTTCACAGGAACTaGCTCCTTGGCTGTTCTACA | + |
Preference number: 2 (lower is better) Translates to: EHMAPNKDANDLPDKDRTSLHRN*LLGCST Trigger: TGTAGAACAGCCAAGGAGGCAGTTCCTGTGAAGGGA...TGTCCTGTCTTTGTCCGGAAGGTCATTGGCGTCTTTGTTGGGGGCCATGTGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | GAGGAAAGTGTATCGAGCCTAGGAGGACTGCAGGAGGATAATCACAGGAGGAGCCATACTCTGCACTGGTaGGACTGTTCATCTGCAGGC | + |
Preference number: 2 (lower is better) Translates to: EESVSSLGGLQEDNHRRSHTLHW*DCSSAG Trigger: GCCTGCAGATGAACAGTCCCACCAGTGCAGAGTATG...GCTCCTCCTGTGATTATCCTCCTGCAGTCCTCCTAGGCTCGATACACTTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | TTTCTGACCACATATTTTGGCATCTCAGTCTCTCGTGCCTCAGAGCAGATGAGATGTGACGGCAGACTCTaGGCCCCATGGCCTGTGTCC | + |
Preference number: 2 (lower is better) Translates to: FLTTYFGISVSRASEQMRCDGRL*APWPVS Trigger: GGACACAGGCCATGGGGCCCAGAGTCTGCCGTCACA...TCTCATCTGCTCTGAGGCACGAGAGACTGAGATGCCAAAATATGTGGTCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | ATCAACCATGTGGACCTAGGAGTTGTGCTGCCCACTTCCAGGGGGTTGACACATCTGAGGCTGGCAGGATaGCACTGGATTGGACAATCA | + |
Preference number: 2 (lower is better) Translates to: INHVDLGVVLPTSRGLTHLRLAG*HWIGQS Trigger: TGATTGTCCAATCCAGTGCCATCCTGCCAGCCTCAG...ATGTGTCAACCCCCTGGAAGTGGGCAGCACAACTCCTAGGTCCACATGGTTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 90 bp | ACCACGAGGCTCACTCGCGCAATAATGCTGCCATCAAACCTCACCTaGGGGGAACACTGTAATTTAACCCTGAACCCCAACTTGTGCCCA | + |
Preference number: 2 (lower is better) Translates to: TTRLTRAIMLPSNLT*GEHCNLTLNPNLCP Trigger: TGGGCACAAGTTGGGGTTCAGGGTTAAATTACAGTGTTCCCCCAAGGTGAGGTTTGATGGCAGCATTATTGCGCGAGTGAGCCTCGTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 90 bp | GAGGGTCTGCTTCAGGAACAGGGGCACCTGAGGCATCTTAGGATCTaGAGGGATGTTACAAGATGCTGTGACAGAGAAGAAGCCACACGT | + |
Preference number: 2 (lower is better) Translates to: EGLLQEQGHLRHLRI*RDVTRCCDREEATR Trigger: ACGTGTGGCTTCTTCTCTGTCACAGCATCTTGTAACATCCCTCAAGATCCTAAGATGCCTCAGGTGCCCCTGTTCCTGAAGCAGACCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | AAGGGGGTCAACTTGGATATCTGGAGAGCTATTCTGAGTGAATCCCTTCACAGGTTCCACCTGAGCCTGTaGCCCTGGGAGTCTAGTCTC | + |
Preference number: 2 (lower is better) Translates to: KGVNLDIWRAILSESLHRFHLSL*PWESSL Trigger: GAGACTAGACTCCCAGGGTCACAGGCTCAGGTGGAA...CCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | ATACTTGATGTGTGCTCCTTCTGCCGCAAACCACCCACTGGTGAGAGGAAGTCCAGAGGCTCAGCTTCATaGTGGATTGGCTTTCAGGGA | + |
Preference number: 2 (lower is better) Translates to: ILDVCSFCRKPPTGERKSRGSAS*WIGFQG Trigger: TCCCTGAAAGCCAATCCATCATGAAGCTGAGCCTCT...GGACTTCCTCTCACCAGTGGGTGGTTTGCGGCAGAAGGAGCACACATCAAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | AAGGGGGTCAACTTGGATATCTGGAGAGCTATTCTGAGTGAATCCCTTCACAGGGACAGCAGGGACAGATaGCTCCCATGTCCAGTGCCT | + |
Preference number: 2 (lower is better) Translates to: KGVNLDIWRAILSESLHRDSRDR*LPCPVP Trigger: AGGCACTGGACATGGGAGGCATCTGTCCCTGCTGTC...CCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | CTTTCTGACCACATATTTTGGCATCTCAGTCTCTCGTGCCTCAGAGCAGATGAGCCCCAGTGTCCACCATaGTGGCCACAGCATCCTCTT | + |
Preference number: 2 (lower is better) Translates to: LSDHIFWHLSLSCLRADEPQCPP*WPQHPL Trigger: AAGAGGATGCTGTGGCCAGCATGGTGGACACTGGGG...CTCATCTGCTCTGAGGCACGAGAGACTGAGATGCCAAAATATGTGGTCAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | CACTCCGGGTGCACCAGTCAGATACACAGTGAGAACTTTATAAAAAGACGGTCAGGCTCTCTGAGGGTCTaGTTCAGGAACAGGGGCACC | + |
Preference number: 2 (lower is better) Translates to: HSGCTSQIHSENFIKRRSGSLRV*FRNRGT Trigger: GGTGCCCCTGTTCCTGAAGCAGACCCTCAGAGAGCC...TGACCGTCTTTTTATAAAGTTCTCACTGTGTATCTGACTGGTGCACCCGGAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGTACTTTGCTTTCCCCTaGTGTTTCCAGGAACACCAG | + |
Preference number: 2 (lower is better) Translates to: DVTCKYWNLQRAEGTASQYFAFP*CFQEHQ Trigger: CTGGTGTTCCTGGAAACAGCAGGGGAAAGCAAAGTA...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | GAGGAAAGTGTATCGAGCCTAGGAGGACTGCAGGAGGATAATCACAGGAGGAGCGTAAATACTGGAATCTaGAGAGAGCCGAGGGGACAG | + |
Preference number: 2 (lower is better) Translates to: EESVSSLGGLQEDNHRRSVNTGI*REPRGQ Trigger: CTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTAC...GCTCCTCCTGTGATTATCCTCCTGCAGTCCTCCTAGGCTCGATACACTTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | AAGCAAGGTCCTAACACAGGCACCTCAGTCCCAGCATTCCTTCTGGTCCTTTTCAGCCCAGTTTCTCTCTaGCTGGCACCATCATTGGCA | + |
Preference number: 2 (lower is better) Translates to: KQGPNTGTSVPAFLLVLFSPVSL*LAPSLA Trigger: TGCCAATGATGGTGCCAGCCAGAGAGAAACTGGGCT...GAAAAGGACCAGAAGGAATGCTGGGACTGAGGTGCCTGTGTTAGGACCTTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 90 bp | CTCTTCTGTAAGTCTGGTTGCCAGCGCTCCAGTGTTTCTTTCATGTaGGTGCTGAGGCTGGCAGGATGGCACTGGATTGGACAATCAAGA | + |
Preference number: 2 (lower is better) Translates to: LFCKSGCQRSSVSFM*VLRLAGWHWIGQSR Trigger: TCTTGATTGTCCAATCCAGTGCCATCCTGCCAGCCTCAGCACCAACATGAAAGAAACACTGGAGCGCTGGCAACCAGACTTACAGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 90 bp | CCAGATAGATACAAGGAGTCTGCAAGAGCAGCTTTCCCAACTACTTaGCTTTCCCCTGCTGTTTCCAGGAACACCAGGCAAGCAAGGTCC | + |
Preference number: 2 (lower is better) Translates to: PDRYKESARAAFPTT*LSPAVSRNTRQARS Trigger: GGACCTTGCTTGCCTGGTGTTCCTGGAAACAGCAGGGGAAAGCAAAGTAGTTGGGAAAGCTGCTCTTGCAGACTCCTTGTATCTATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | CCAGGCCCACCTTTCTTGAGTGGGGAAACCTCGCACAATCATTTCTCTACATCACATACAGTAAGAGACTaGGGACAAAGGGAAGCGGGG | + |
Preference number: 2 (lower is better) Translates to: PGPPFLSGETSHNHFSTSHTVRD*GQREAG Trigger: CCCCGCTTCCCTTTGTCCTCAGTCTCTTACTGTATG...TGATGTAGAGAAATGATTGTGCGAGGTTTCCCCACTCAAGAAAGGTGGGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | GAGGAAAGTGTATCGAGCCTAGGAGGACTGCAGGAGGATAATCACAGGAGGAGCCCACACGTGGGAAGATaGAATGTATGTGCCTCAAAC | + |
Preference number: 2 (lower is better) Translates to: EESVSSLGGLQEDNHRRSPHVGR*NVCASN Trigger: GTTTGAGGCACATACATTTCATCTTCCCACGTGTGG...GCTCCTCCTGTGATTATCCTCCTGCAGTCCTCCTAGGCTCGATACACTTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | GAGGAAAGTGTATCGAGCCTAGGAGGACTGCAGGAGGATAATCACAGGAGGAGCGACAGTCGCCCTGTGTaGATGATTCCTTATTCTCAC | + |
Preference number: 2 (lower is better) Translates to: EESVSSLGGLQEDNHRRSDSRPV*MIPYSH Trigger: GTGAGAATAAGGAATCATTCACACAGGGCGACTGTC...GCTCCTCCTGTGATTATCCTCCTGCAGTCCTCCTAGGCTCGATACACTTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | GCATGTACCTGCTCAGAAAGTGGAGTTGAGATGGAGAGAAATGACATATGTCAGCTCCTGAGGTGCCCATaGTCAGTGGTCAGCTCTGGG | + |
Preference number: 2 (lower is better) Translates to: ACTCSESGVEMERNDICQLLRCP*SVVSSG Trigger: CCCAGAGCTGACCACTGAGCATGGGCACCTCAGGAG...CTGACATATGTCATTTCTCTCCATCTCAACTCCACTTTCTGAGCAGGTACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | GAGGAAAGTGTATCGAGCCTAGGAGGACTGCAGGAGGATAATCACAGGAGGAGCTTTACAAAACCCCCATaGCAACCCGACACAGAACAG | + |
Preference number: 2 (lower is better) Translates to: EESVSSLGGLQEDNHRRSFTKPP*QPDTEQ Trigger: CTGTTCTGTGTCGGGTTGGCATGGGGGTTTTGTAAA...GCTCCTCCTGTGATTATCCTCCTGCAGTCCTCCTAGGCTCGATACACTTTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | AGCGGAGATGGTGACTTCAGCCCAAGGAACCTGCCTTACTCCTGTTGCTCCTCATCTGACCACATATTTTaGCATCTCAGTCTCTCGTGC | + |
Preference number: 2 (lower is better) Translates to: SGDGDFSPRNLPYSCCSSSDHIF*HLSLSC Trigger: GCACGAGAGACTGAGATGCCAAAATATGTGGTCAGA...TGAGGAGCAACAGGAGTAAGGCAGGTTCCTTGGGCTGAAGTCACCATCTCCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | GCCTCTCAAGTCTTCATGACTACTCTGTCTTCACTCCGGGTGCACCAGTCAGATTCTGGAGAGCTATTCTaGGTGAATCCCTTCACAGGA | + |
Preference number: 2 (lower is better) Translates to: ASQVFMTTLSSLRVHQSDSGELF*VNPFTG Trigger: TCCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGA...ATCTGACTGGTGCACCCGGAGTGAAGACAGAGTAGTCATGAAGACTTGAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | AAGCAAGGTCCTAACACAGGCACCTCAGTCCCAGCATTCCTTCTGGTCCTTTTCATTGGACAATCAAGATaGAGAAGGAGGAGGCCCCAT | + |
Preference number: 2 (lower is better) Translates to: KQGPNTGTSVPAFLLVLFIGQSR*RRRRPH Trigger: ATGGGGCCTCCTCCTTCTCCATCTTGATTGTCCAAT...GAAAAGGACCAGAAGGAATGCTGGGACTGAGGTGCCTGTGTTAGGACCTTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGAGAAGAAGCCACACGTaGGAAGATGAAATGTATGTG | + |
Preference number: 2 (lower is better) Translates to: DVTCKYWNLQRAEGTASQRRSHT*EDEMYV Trigger: CACATACATTTCATCTTCCCACGTGTGGCTTCTTCT...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 90 bp | ACAGCAGGGACAGATGCCTCCCATGTCCAGTGCCTATGTAAATCCTaGTCATCTTATGTCATGCCCATCACAGATGCAGGAAAGGGACAA | + |
Preference number: 2 (lower is better) Translates to: TAGTDASHVQCLCKS*SSYVMPITDAGKGQ Trigger: TTGTCCCTTTCCTGCATCTGTGATGGGCATGACATAAGATGACAAGGATTTACATAGGCACTGGACATGGGAGGCATCTGTCCCTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | AAGCAAGGTCCTAACACAGGCACCTCAGTCCCAGCATTCCTTCTGGTCCTTTTCAGCACTGAGTGGATCTaGATGGAAAGGTGCTTGTTT | + |
Preference number: 2 (lower is better) Translates to: KQGPNTGTSVPAFLLVLFSTEWI*MERCLF Trigger: AAACAAGCACCTTTCCATGCAGATCCACTCAGTGCT...GAAAAGGACCAGAAGGAATGCTGGGACTGAGGTGCCTGTGTTAGGACCTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | ACTCTTGATGGTAGAGCCTGGCTTTCCCAAGAGGGGAACAAAGGTGGGACCCTGGTCAACTTGGATATCTaGAGAGCTATTCTGAGTGAA | + |
Preference number: 2 (lower is better) Translates to: TLDGRAWLSQEGNKGGTLVNLDI*RAILSE Trigger: TTCACTCAGAATAGCTCTCCAGATATCCAAGTTGAC...CAGGGTCCCACCTTTGTTCCCCTCTTGGGAAAGCCAGGCTCTACCATCAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR-3UTR CCA 90 bp | TTTCTGACCACATATTTTGGCATCTCAGTCTCTCGTGCCTCAGAGCAGATGAGATGGGGACTTTATACCTaGATGTCCAGGCCAGTCAGC | + |
Preference number: 2 (lower is better) Translates to: FLTTYFGISVSRASEQMRWGLYT*MSRPVS Trigger: GCTGACTGGCCTGGACATCCAGGTATAAAGTCCCCA...TCTCATCTGCTCTGAGGCACGAGAGACTGAGATGCCAAAATATGTGGTCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR-3UTR TCA 90 bp | ATGGCCCCCAACAAAGACGCCAATGACCTTCCGGACAAAGACAGGACATCTGGATGTGCCTCAAACTTATaGCCCATAGAGCCAATAAAA | + |
Preference number: 2 (lower is better) Translates to: MAPNKDANDLPDKDRTSGCASNL*PIEPIK Trigger: TTTTATTGGCTCTATGGGTCATAAGTTTGAGGCACA...TCCAGATGTCCTGTCTTTGTCCGGAAGGTCATTGGCGTCTTTGTTGGGGGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR-3UTR TCA 90 bp | ATACTTGATGTGTGCTCCTTCTGCCGCAAACCACCCACTGGTGAGAGGAAGTCCGCTTTAATGCCTTTCTaGCCACATATTTTGGCATCT | + |
Preference number: 2 (lower is better) Translates to: ILDVCSFCRKPPTGERKSALMPF*PHILAS Trigger: AGATGCCAAAATATGTGGTCAGAAAGGCATTAAAGC...GGACTTCCTCTCACCAGTGGGTGGTTTGCGGCAGAAGGAGCACACATCAAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR-3UTR GCA 90 bp | GCATGTACCTGCTCAGAAAGTGGAGTTGAGATGGAGAGAAATGACATATGTCAGGCTGACAGCTCTCTCTaGCTCTGTGGTCACTACAGA | + |
Preference number: 2 (lower is better) Translates to: ACTCSESGVEMERNDICQADSSL*LCGHYR Trigger: TCTGTAGTGACCACAGAGGCAGAGAGAGCTGTCAGC...CTGACATATGTCATTTCTCTCCATCTCAACTCCACTTTCTGAGCAGGTACATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | GCCTCTCAAGTCTTCATGACTACTCTGTCTTCACTCCGGGTGCACCAGTCAGATGGAGGAGGCCCCATTTaGTATTTAATAGTAGGATGT | + |
Preference number: 2 (lower is better) Translates to: ASQVFMTTLSSLRVHQSDGGGPI*YLIVGC Trigger: ACATCCTACTATTAAATACCAAATGGGGCCTCCTCC...ATCTGACTGGTGCACCCGGAGTGAAGACAGAGTAGTCATGAAGACTTGAGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | GCCTCTCAAGTCTTCATGACTACTCTGTCTTCACTCCGGGTGCACCAGTCAGATAACTTGATGTCATTCTaGATGTGTGGGAAGAGCACA | + |
Preference number: 2 (lower is better) Translates to: ASQVFMTTLSSLRVHQSDNLMSF*MCGKST Trigger: TGTGCTCTTCCCACACATCCAGAATGACATCAAGTT...ATCTGACTGGTGCACCCGGAGTGAAGACAGAGTAGTCATGAAGACTTGAGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR-3UTR CCA 90 bp | GCATGTACCTGCTCAGAAAGTGGAGTTGAGATGGAGAGAAATGACATATGTCAGTCCCATTCTGAACACTaGAGGATGAGAGCTGCCAGG | + |
Preference number: 2 (lower is better) Translates to: ACTCSESGVEMERNDICQSHSEH*RMRAAR Trigger: CCTGGCAGCTCTCATCCTCCAGTGTTCAGAATGGGA...CTGACATATGTCATTTCTCTCCATCTCAACTCCACTTTCTGAGCAGGTACATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | CCAGGCCCACCTTTCTTGAGTGGGGAAACCTCGCACAATCATTTCTCTACATCAGCTTTCCTGTGCATGTaGGGACCACAAAATGTATTT | + |
Preference number: 2 (lower is better) Translates to: PGPPFLSGETSHNHFSTSAFLCM*GPQNVF Trigger: AAATACATTTTGTGGTCCTCACATGCACAGGAAAGC...TGATGTAGAGAAATGATTGTGCGAGGTTTCCCCACTCAAGAAAGGTGGGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | TGGGACCCTGGATGGATACATTCATTACTTCTGGAGACACTCTGGGGACTTTATTGTTACAAGATGCTGTaGCAGAGAAGAAGCCACACG | + |
Preference number: 2 (lower is better) Translates to: WDPGWIHSLLLETLWGLYCYKML*QRRSHT Trigger: CGTGTGGCTTCTTCTCTGTCACAGCATCTTGTAACA...ATAAAGTCCCCAGAGTGTCTCCAGAAGTAATGAATGTATCCATCCAGGGTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | AAGGGGGTCAACTTGGATATCTGGAGAGCTATTCTGAGTGAATCCCTTCACAGGTTTGAGTTTTGGTTATaGAGAAGACAAGGCCGGGCT | + |
Preference number: 2 (lower is better) Translates to: KGVNLDIWRAILSESLHRFEFWL*RRQGRA Trigger: AGCCCGGCCTTGTCTTCTCCATAACCAAAACTCAAA...CCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | GCATGTACCTGCTCAGAAAGTGGAGTTGAGATGGAGAGAAATGACATATGTCAGAGAGGGGAACAAAGGTaGGACCCTGGATGGATACAT | + |
Preference number: 2 (lower is better) Translates to: ACTCSESGVEMERNDICQRGEQR*DPGWIH Trigger: ATGTATCCATCCAGGGTCCCACCTTTGTTCCCCTCT...CTGACATATGTCATTTCTCTCCATCTCAACTCCACTTTCTGAGCAGGTACATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR TCA 90 bp | AAGGGGGTCAACTTGGATATCTGGAGAGCTATTCTGAGTGAATCCCTTCACAGGTTGAAATGCTCTCACTaGGAACCTGTCTTTCAGAAC | + |
Preference number: 2 (lower is better) Translates to: KGVNLDIWRAILSESLHRLKCSH*EPVFQN Trigger: GTTCTGAAAGACAGGTTCTCAGTGAGAGCATTTCAA...CCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR GCA 90 bp | ATGGCCCCCAACAAAGACGCCAATGACCTTCCGGACAAAGACAGGACATCTGGAAAGATGAAATGTATGTaGCTCAAACTTATGACCCAT | + |
Preference number: 2 (lower is better) Translates to: MAPNKDANDLPDKDRTSGKMKCM*LKLMTH Trigger: ATGGGTCATAAGTTTGAGGCACATACATTTCATCTT...TCCAGATGTCCTGTCTTTGTCCGGAAGGTCATTGGCGTCTTTGTTGGGGGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CCA 90 bp | GCATGTACCTGCTCAGAAAGTGGAGTTGAGATGGAGAGAAATGACATATGTCAGCTGAAGGACTCTCTATaGGAAGAGGCCTTTTACCAG | + |
Preference number: 2 (lower is better) Translates to: ACTCSESGVEMERNDICQLKDSL*EEAFYQ Trigger: CTGGTAAAAGGCCTCTTCCCATAGAGAGTCCTTCAG...CTGACATATGTCATTTCTCTCCATCTCAACTCCACTTTCTGAGCAGGTACATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | GCATCTACTTCTGTCAGGGTGTGCATGCGCGCCCAGTaGACACACCTCTCACAGGGCTGGGGAGGGGAAGAC | + |
Preference number: 3 (lower is better) Translates to: ASTSVRVCMRAQ*THLSQGWGGED Trigger: GTCTTCCCCTCCCCAGCCCTGTGAGAGGTGTGTGCACTGGGCGCGCATGCACACCCTGACAGAAGTAGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | CCAGACTTGGTAGGCTGCACTCTTCCCTTCCACCCGTaGCCAGGGAACTGTCCCCTTGAGGCTCACCCTCAT | + |
Preference number: 3 (lower is better) Translates to: PDLVGCTLPFHP*PGNCPLEAHPH Trigger: ATGAGGGTGAGCCTCAAGGGGACAGTTCCCTGGGCACGGGTGGAAGGGAAGAGTGCAGCCTACCAAGTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | CTCCTGAGGTGCCCATGCTCAGTGGTCAGCTCTGGGTaGTACCACGAGGCTCACTCGCGCAATAATGCTGCC | + |
Preference number: 3 (lower is better) Translates to: LLRCPCSVVSSG*YHEAHSRNNAA Trigger: GGCAGCATTATTGCGCGAGTGAGCCTCGTGGTACCACCCAGAGCTGACCACTGAGCATGGGCACCTCAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | ACCACGTTCTCACAGGCTGTCAGCACTCAGGCTCTCTaGGGGTCTGCTTCAGGAACAGGGGCACCTGAGGCA | + |
Preference number: 3 (lower is better) Translates to: TTFSQAVSTQAL*GSASGTGAPEA Trigger: TGCCTCAGGTGCCCCTGTTCCTGAAGCAGACCCTCAGAGAGCCTGAGTGCTGACAGCCTGTGAGAACGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | AATGGCTGGCACCCAGCTCCACCTGGGTATCCAGGGTaGCTCCGTGGCATGTCCCCTTATCATAGCTCCTGG | + |
Preference number: 3 (lower is better) Translates to: NGWHPAPPGYPG*LRGMSPYHSSW Trigger: CCAGGAGCTATGATAAGGGGACATGCCACGGAGTCACCCTGGATACCCAGGTGGAGCTGGGTGCCAGCCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | CTCCTCATGACCCGTCTCTACCCAGACTTGGTAGGCTaGACTCTTCCCTTCCACCCGTGCCCAGGGAACTGT | + |
Preference number: 3 (lower is better) Translates to: LLMTRLYPDLVG*TLPFHPCPGNC Trigger: ACAGTTCCCTGGGCACGGGTGGAAGGGAAGAGTGCAGCCTACCAAGTCTGGGTAGAGACGGGTCATGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | CACAGCGTCCCTCTCATCCCTCCAGGTGTCCCACCTTaGCGTCTGCCTAAGGCATGTTCTGAGCTTCCTCAC | + |
Preference number: 3 (lower is better) Translates to: HSVPLIPPGVPP*RLPKACSELPH Trigger: GTGAGGAAGCTCAGAACATGCCTTAGGCAGACGGCAAGGTGGGACACCTGGAGGGATGAGAGGGACGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CAA 90 bp | CGTCTCTACCCAGACTTGGTAGGCTGCACTCTTCCCTTCCACCCGTGCCCAGGGAGTGTTTCTTTCATGTaGGTGCTGAGGCTGGCAGGA | + |
Preference number: 3 (lower is better) Translates to: RLYPDLVGCTLPFHPCPGSVSFM*VLRLAG Trigger: TCCTGCCAGCCTCAGCACCAACATGAAAGAAACACT...CCCTGGGCACGGGTGGAAGGGAAGAGTGCAGCCTACCAAGTCTGGGTAGAGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | CCTGGATGTCCAGGCCAGTCAGCTGTCCTTTCTCCCTaGAGTAATGGGACCAGAGTGGCCCCTCCACAAGGA | + |
Preference number: 3 (lower is better) Translates to: PGCPGQSAVLSP*SNGTRVAPPQG Trigger: TCCTTGTGGAGGGGCCACTCTGGTCCCATTACTTCAGGGAGAAAGGACAGCTGACTGGCCTGGACATCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | ACCCTAGAGCTTCCCTGGGCCCAGAAGCGGAGATGGTaGCTTCAGCCCAAGGAACCTGCCTTACTCCTGTTG | + |
Preference number: 3 (lower is better) Translates to: TLELPWAQKRRW*LQPKEPALLLL Trigger: CAACAGGAGTAAGGCAGGTTCCTTGGGCTGAAGTCACCATCTCCGCTTCTGGGCCCAGGGAAGCTCTAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | GCCCAGTTTCTCTCTGGCTGGCACCATCATTGGCACTaGGCATCTACTTCTGTCAGGGTGTGCATGCGCGCC | + |
Preference number: 3 (lower is better) Translates to: AQFLSGWHHHWH*ASTSVRVCMRA Trigger: GGCGCGCATGCACACCCTGACAGAAGTAGATGCTCAGTGCCAATGATGGTGCCAGCCAGAGAGAAACTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | TCCCTCTCATCCCTCCAGGTGTCCCACCTTGCCGTCTaGCTAAGGCATGTTCTGAGCTTCCTCACCCCAAGT | + |
Preference number: 3 (lower is better) Translates to: SLSSLQVSHLAV*LRHVLSFLTPS Trigger: ACTTGGGGTGAGGAAGCTCAGAACATGCCTTAGGCAGACGGCAAGGTGGGACACCTGGAGGGATGAGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | TTGCCAGTCTGGGAGGAGGGTCTAAGATGGCAGCTGTaGGCTTGTGGGTGGCCAACATGTTCCTTCCAGGTG | + |
Preference number: 3 (lower is better) Translates to: LPVWEEGLRWQL*ACGWPTCSFQV Trigger: CACCTGGAAGGAACATGTTGGCCACCCACAAGCCCACAGCTGCCATCTTAGACCCTCCTCCCAGACTGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | CACCCCAAGTACCAGACAAGAGAGCTGTATTCTAGCTaGGTCAGCAAGCCAGCCAGGGCTGTCAGGGAGGTG | + |
Preference number: 3 (lower is better) Translates to: HPKYQTRELYSS*VSKPARAVREV Trigger: CACCTCCCTGACAGCCCTGGCTGGCTTGCTGACCCAGCTAGAATACAGCTCTCTTGTCTGGTACTTGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CAA 90 bp | ATACTTGATGTGTGCTCCTTCTGCCGCAAACCACCCACTGGTGAGAGGAAGTCCCAACCACTGAAGGGCTaGAGTGCCGAGATGCACCCC | + |
Preference number: 3 (lower is better) Translates to: ILDVCSFCRKPPTGERKSQPLKG*SAEMHP Trigger: GGGGTGCATCTCGGCACTCAAGCCCTTCAGTGGTTG...GGACTTCCTCTCACCAGTGGGTGGTTTGCGGCAGAAGGAGCACACATCAAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CAA 90 bp | ATACTTGATGTGTGCTCCTTCTGCCGCAAACCACCCACTGGTGAGAGGAAGTCCCCAGGCCCACCTTTCTaGAGTGGGGAAACCTCGCAC | + |
Preference number: 3 (lower is better) Translates to: ILDVCSFCRKPPTGERKSPGPPF*SGETSH Trigger: GTGCGAGGTTTCCCCACTCAAGAAAGGTGGGCCTGG...GGACTTCCTCTCACCAGTGGGTGGTTTGCGGCAGAAGGAGCACACATCAAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | CCATCACAGATGCAGGAAAGGGACAAAGCAGATGACTaGTCCTGTGACGGCAGACTCTGGGCCCCATGGCCT | + |
Preference number: 3 (lower is better) Translates to: PSQMQERDKADD*SCDGRLWAPWP Trigger: AGGCCATGGGGCCCAGAGTCTGCCGTCACAGGATCAGTCATCTGCTTTGTCCCTTTCCTGCATCTGTGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | AGTGCCGAGATGCACCCCCAGCCTCTCAAGTCTTCATaGCTACTCTGTCTTCACTCCGGGTGCACCAGTCAG | + |
Preference number: 3 (lower is better) Translates to: SAEMHPQPLKSS*LLCLHSGCTSQ Trigger: CTGACTGGTGCACCCGGAGTGAAGACAGAGTAGTCATGAAGACTTGAGAGGCTGGGGGTGCATCTCGGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | GAGGAGGGTCTAAGATGGCAGCTGTGGGCTTGTGGGTaGCCAACATGTTCCTTCCAGGTGCATGTACCTGCT | + |
Preference number: 3 (lower is better) Translates to: EEGLRWQLWACG*PTCSFQVHVPA Trigger: AGCAGGTACATGCACCTGGAAGGAACATGTTGGCCACCCACAAGCCCACAGCTGCCATCTTAGACCCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | CTGGTCCGCCACACCAAACACTTCCACCTGAGCCTGTaGCCCTGGGAGTCTAGTCTCCTGTTGAAATGCTCT | + |
Preference number: 3 (lower is better) Translates to: LVRHTKHFHLSL*PWESSLLLKCS Trigger: AGAGCATTTCAACAGGAGACTAGACTCCCAGGGTCACAGGCTCAGGTGGAAGTGTTTGGTGTGGCGGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | TCTCACCTGCTCTCCCTCCGCAGAGTGCTGCCAACATaGCAGTTTCCAGGACAGTCAAATATGCCCAACCAC | + |
Preference number: 3 (lower is better) Translates to: SHLLSLRRVLPT*QFPGQSNMPNH Trigger: GTGGTTGGGCATATTTGACTGTCCTGGAAACTGGCATGTTGGCAGCACTCTGCGGAGGGAGAGCAGGTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | GCTCACCCTCATCTCACCTGCTCTCCCTCCGCAGAGTaGTGCCAACATGCCAGTTTCCAGGACAGTCAAATA | + |
Preference number: 3 (lower is better) Translates to: AHPHLTCSPSAE*CQHASFQDSQI Trigger: TATTTGACTGTCCTGGAAACTGGCATGTTGGCAGCACTCTGCGGAGGGAGAGCAGGTGAGATGAGGGTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | GTCACCCTTTTAGCAGCCAAGGCTGACAGCTCTCTCTaGCTCTGTGGTCACTACAGACTGATGGGGGTCACA | + |
Preference number: 3 (lower is better) Translates to: VTLLAAKADSSL*LCGHYRLMGVT Trigger: TGTGACCCCCATCAGTCTGTAGTGACCACAGAGGCAGAGAGAGCTGTCAGCCTTGGCTGCTAAAAGGGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | GAAGGAAGCTGCTATCCTCTGTACTCCCAGAGCACATaGCCCCCAACAAAGACGCCAATGACCTTCCGGACA | + |
Preference number: 3 (lower is better) Translates to: EGSCYPLYSQST*PPTKTPMTFRT Trigger: TGTCCGGAAGGTCATTGGCGTCTTTGTTGGGGGCCATGTGCTCTGGGAGTACAGAGGATAGCAGCTTCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | CTGAGTTTAAGGGCACAGCCCTCCCATTCTGAACACTaGAGGATGAGAGCTGCCAGGCCCACCTTTCTTGAG | + |
Preference number: 3 (lower is better) Translates to: LSLRAQPSHSEH*RMRAARPTFLE Trigger: CTCAAGAAAGGTGGGCCTGGCAGCTCTCATCCTCCAGTGTTCAGAATGGGAGGGCTGTGCCCTTAAACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | CTGACAGCTCTCTCTGCCTCTGTGGTCACTACAGACTaGTGGGGGTCACAGCTCTGGAAAACACAGGTGACT | + |
Preference number: 3 (lower is better) Translates to: LTALSASVVTTD*WGSQLWKTQVT Trigger: AGTCACCTGTGTTTTCCAGAGCTGTGACCCCCATCAGTCTGTAGTGACCACAGAGGCAGAGAGAGCTGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | TCTTTCATGTTGGTGCTGAGGCTGGCAGGATGGCACTaGATTGGACAATCAAGATGGAGAAGGAGGAGGCCC | + |
Preference number: 3 (lower is better) Translates to: SFMLVLRLAGWH*IGQSRWRRRRP Trigger: GGGCCTCCTCCTTCTCCATCTTGATTGTCCAATCCAGTGCCATCCTGCCAGCCTCAGCACCAACATGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | GTTGCCAGCGCTCCAGTGTTTCTTTCATGTTGGTGCTaGGGCTGGCAGGATGGCACTGGATTGGACAATCAA | + |
Preference number: 3 (lower is better) Translates to: VASAPVFLSCWC*GWQDGTGLDNQ Trigger: TTGATTGTCCAATCCAGTGCCATCCTGCCAGCCTCAGCACCAACATGAAAGAAACACTGGAGCGCTGGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | CATGCTGGCCACAGCATCCTCTTCTGTAAGTCTGGTTaGCAGCGCTCCAGTGTTTCTTTCATGTTGGTGCTG | + |
Preference number: 3 (lower is better) Translates to: HAGHSILFCKSG*QRSSVSFMLVL Trigger: CAGCACCAACATGAAAGAAACACTGGAGCGCTGGCAACCAGACTTACAGAAGAGGATGCTGTGGCCAGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | TGGAGAGCTATTCTGAGTGAATCCCTTCACAGGAACTaGCTCCTTGGCTGTTCTACAGTGACCACGTGTCCC | + |
Preference number: 3 (lower is better) Translates to: WRAILSESLHRN*LLGCSTVTTCP Trigger: GGGACACGTGGTCACTGTAGAACAGCCAAGGAGGCAGTTCCTGTGAAGGGATTCACTCAGAATAGCTCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | TGCTGCCAACATGCCAGTTTCCAGGACAGTCAAATATaGCCAACCACTGAAGGGCTTGAGTGCCGAGATGCA | + |
Preference number: 3 (lower is better) Translates to: CCQHASFQDSQI*PTTEGLECRDA Trigger: TGCATCTCGGCACTCAAGCCCTTCAGTGGTTGGGCATATTTGACTGTCCTGGAAACTGGCATGTTGGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | GGGGGTCAACTTGGATATCTGGAGAGCTATTCTGAGTaGATCCCTTCACAGGAACTGCCTCCTTGGCTGTTC | + |
Preference number: 3 (lower is better) Translates to: GGQLGYLESYSE*IPSQELPPWLF Trigger: GAACAGCCAAGGAGGCAGTTCCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | GCCTCAGAGCAGATGAGAAGTAGAGGCTCAGCTTCATaGTGGATTGGCTTTCAGGGATGTGTCTTACGAGGG | + |
Preference number: 3 (lower is better) Translates to: ASEQMRSRGSAS*WIGFQGCVLRG Trigger: CCCTCGTAAGACACATCCCTGAAAGCCAATCCATCATGAAGCTGAGCCTCTACTTCTCATCTGCTCTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | ACACTGGAGGATGAGAGCTGCCAGGCCCACCTTTCTTaGGTGGGGAAACCTCGCACAATCATTTCTCTACAT | + |
Preference number: 3 (lower is better) Translates to: TLEDESCQAHLS*VGKPRTIISLH Trigger: ATGTAGAGAAATGATTGTGCGAGGTTTCCCCACTCAAGAAAGGTGGGCCTGGCAGCTCTCATCCTCCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | CGTGACTCATACTCTGCACTGGTGGGACTGTTCATCTaGAGGCTTTCCTGTGCATGTGAGGACCACAAAATG | + |
Preference number: 3 (lower is better) Translates to: RDSYSALVGLFI*RLSCACEDHKM Trigger: CATTTTGTGGTCCTCACATGCACAGGAAAGCCTGCAGATGAACAGTCCCACCAGTGCAGAGTATGAGTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | CCACAGACAGCAGGGACAGATGCCTCCCATGTCCAGTaGCTATGTAAATCCTTGTCATCTTATGTCATGCCC | + |
Preference number: 3 (lower is better) Translates to: PQTAGTDASHVQ*LCKSLSSYVMP Trigger: GGGCATGACATAAGATGACAAGGATTTACATAGGCACTGGACATGGGAGGCATCTGTCCCTGCTGTCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | CAGCTGTCCTTTCTCCCTGAAGTAATGGGACCAGAGTaGCCCCTCCACAAGGAAGCTAAATATCTCAAAGGC | + |
Preference number: 3 (lower is better) Translates to: QLSFLPEVMGPE*PLHKEAKYLKG Trigger: GCCTTTGAGATATTTAGCTTCCTTGTGGAGGGGCCACTCTGGTCCCATTACTTCAGGGAGAAAGGACAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR CCA 72 bp | TCATTACTTCTGGAGACACTCTGGGGACTTTATACCTaGATGTCCAGGCCAGTCAGCTGTCCTTTCTCCCTG | + |
Preference number: 3 (lower is better) Translates to: SLLLETLWGLYT*MSRPVSCPFSL Trigger: CAGGGAGAAAGGACAGCTGACTGGCCTGGACATCCAGGTATAAAGTCCCCAGAGTGTCTCCAGAAGTAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR CCA 72 bp | CCTGGCTTTCCCAAGAGGGGAACAAAGGTGGGACCCTaGATGGATACATTCATTACTTCTGGAGACACTCTG | + |
Preference number: 3 (lower is better) Translates to: PGFPKRGTKVGP*MDTFITSGDTL Trigger: CAGAGTGTCTCCAGAAGTAATGAATGTATCCATCCAGGGTCCCACCTTTGTTCCCCTCTTGGGAAAGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR CCA 72 bp | GTGTCTTACGAGGGAACAACCAGAAGGTCCAGGAGATaGAGGCTGATTCAAAAGCAAGGCTTAGTGGGCCTT | + |
Preference number: 3 (lower is better) Translates to: VSYEGTTRRSRR*RLIQKQGLVGL Trigger: AAGGCCCACTAAGCCTTGCTTTTGAATCAGCCTCCATCTCCTGGACCTTCTGGTTGTTCCCTCGTAAGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CAA 90 bp | GCATGTACCTGCTCAGAAAGTGGAGTTGAGATGGAGAGAAATGACATATGTCAGACCCTGAACCCCAACTaGTGCCCAGAGGTACTGCCA | + |
Preference number: 3 (lower is better) Translates to: ACTCSESGVEMERNDICQTLNPN*CPEVLP Trigger: TGGCAGTACCTCTGGGCACAAGTTGGGGTTCAGGGT...CTGACATATGTCATTTCTCTCCATCTCAACTCCACTTTCTGAGCAGGTACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR-3UTR CAA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGTGCCTATGTAAATCCTaGTCATCTTATGTCATGCCC | + |
Preference number: 3 (lower is better) Translates to: DVTCKYWNLQRAEGTASQCLCKS*SSYVMP Trigger: GGGCATGACATAAGATGACAAGGATTTACATAGGCA...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR TCA 72 bp | AGAAGGGGGTCAACTTGGATATCTGGAGAGCTATTCTaGGTGAATCCCTTCACAGGAACTGCCTCCTTGGCT | + |
Preference number: 3 (lower is better) Translates to: RRGSTWISGELF*VNPFTGTASLA Trigger: AGCCAAGGAGGCAGTTCCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR GCA 72 bp | TGGGTGGCCAACATGTTCCTTCCAGGTGCATGTACCTaGTCAGAAAGTGGAGTTGAGATGGAGAGAAATGAC | + |
Preference number: 3 (lower is better) Translates to: WVANMFLPGACT*SESGVEMERND Trigger: GTCATTTCTCTCCATCTCAACTCCACTTTCTGAGCAGGTACATGCACCTGGAAGGAACATGTTGGCCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR CCA 72 bp | AGTGTTTCTTTCATGTTGGTGCTGAGGCTGGCAGGATaGCACTGGATTGGACAATCAAGATGGAGAAGGAGG | + |
Preference number: 3 (lower is better) Translates to: SVSFMLVLRLAG*HWIGQSRWRRR Trigger: CCTCCTTCTCCATCTTGATTGTCCAATCCAGTGCCATCCTGCCAGCCTCAGCACCAACATGAAAGAAACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR-3UTR CAA 90 bp | AAGCAAGGTCCTAACACAGGCACCTCAGTCCCAGCATTCCTTCTGGTCCTTTTCAGGCATCTTAGGATCTaGAGGGATGTTACAAGATGC | + |
Preference number: 3 (lower is better) Translates to: KQGPNTGTSVPAFLLVLFRHLRI*RDVTRC Trigger: GCATCTTGTAACATCCCTCAAGATCCTAAGATGCCT...GAAAAGGACCAGAAGGAATGCTGGGACTGAGGTGCCTGTGTTAGGACCTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR TCA 72 bp | ATTTTGGCATCTCAGTCTCTCGTGCCTCAGAGCAGATaGGAAGTAGAGGCTCAGCTTCATGATGGATTGGCT | + |
Preference number: 3 (lower is better) Translates to: ILASQSLVPQSR*EVEAQLHDGLA Trigger: AGCCAATCCATCATGAAGCTGAGCCTCTACTTCTCATCTGCTCTGAGGCACGAGAGACTGAGATGCCAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR TCA 72 bp | CACAGGGCTCAAACCCCATGGACTGTTTGTAAGCACTaGGTGGATCTGCATGGAAAGGTGCTTGTTTTAAGC | + |
Preference number: 3 (lower is better) Translates to: HRAQTPWTVCKH*VDLHGKVLVLS Trigger: GCTTAAAACAAGCACCTTTCCATGCAGATCCACTCAGTGCTTACAAACAGTCCATGGGGTTTGAGCCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR TCA 72 bp | CATTGCATCAATGAGCACTCTTGCTATCTGAATACTTaGTGTGTGCTCCTTCTGCCGCAAACCACCCACTGG | + |
Preference number: 3 (lower is better) Translates to: HCINEHSCYLNT*CVLLLPQTTHW Trigger: CCAGTGGGTGGTTTGCGGCAGAAGGAGCACACATCAAGTATTCAGATAGCAAGAGTGCTCATTGATGCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | AGAAATGACATATGTCAGCATCAAATGTTTTGGGGATaGTGGAAGGTAAGGAGATGGAGGGCCACCACAGGG | + |
Preference number: 3 (lower is better) Translates to: RNDICQHQMFWG*WKVRRWRATTG Trigger: CCCTGTGGTGGCCCTCCATCTCCTTACCTTCCAGCATCCCCAAAACATTTGATGCTGACATATGTCATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
||
3UTR CCA 72 bp | AGGCTGGCAGGATGGCACTGGATTGGACAATCAAGATaGAGAAGGAGGAGGCCCCATTTGGTATTTAATAGT | + |
Preference number: 3 (lower is better) Translates to: RLAGWHWIGQSR*RRRRPHLVFNS Trigger: ACTATTAAATACCAAATGGGGCCTCCTCCTTCTCCATCTTGATTGTCCAATCCAGTGCCATCCTGCCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | AAAACACAGGTGACTGTTTTTATCCCAGGGCTCACCTaGCCTGTCCTCATCAAAGGTCAGCTTTCTGGGAAT | + |
Preference number: 3 (lower is better) Translates to: KTQVTVFIPGLT*PVLIKGQLSGN Trigger: ATTCCCAGAAAGCTGACCTTTGATGAGGACAGGCCAGGTGAGCCCTGGGATAAAAACAGTCACCTGTGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | TCTGGAGGCCATGAATACTCCTGGAATCTCAATGCTTaGGTTGCACAGAGTTTAACGGCTGTTCTGCCCTTT | + |
Preference number: 3 (lower is better) Translates to: SGGHEYSWNLNA*VAQSLTAVLPF Trigger: AAAGGGCAGAACAGCCGTTAAACTCTGTGCAACCCAAGCATTGAGATTCCAGGAGTATTCATGGCCTCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CAA 90 bp | GAGCACATGGCCCCCAACAAAGACGCCAATGACCTTCCGGACAAAGACAGGACAATGATTAGCTGGGATTaGAGTTTTGGTTATGGAGAA | + |
Preference number: 3 (lower is better) Translates to: EHMAPNKDANDLPDKDRTMISWD*SFGYGE Trigger: TTCTCCATAACCAAAACTCAAATCCCAGCTAATCAT...TGTCCTGTCTTTGTCCGGAAGGTCATTGGCGTCTTTGTTGGGGGCCATGTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CAA 90 bp | GCCTCTCAAGTCTTCATGACTACTCTGTCTTCACTCCGGGTGCACCAGTCAGATGAAAGACAAAAGCCCTaGGTAAGCAGTAAAAGTGAA | + |
Preference number: 3 (lower is better) Translates to: ASQVFMTTLSSLRVHQSDERQKP*VSSKSE Trigger: TTCACTTTTACTGCTTACCAAGGGCTTTTGTCTTTC...ATCTGACTGGTGCACCCGGAGTGAAGACAGAGTAGTCATGAAGACTTGAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR-3UTR CAA 90 bp | CCAGGCCCACCTTTCTTGAGTGGGGAAACCTCGCACAATCATTTCTCTACATCATGTGAAATCACAGTCTaGTTTTCTTGCAGCAGGACA | + |
Preference number: 3 (lower is better) Translates to: PGPPFLSGETSHNHFSTSCEITV*FSCSRT Trigger: TGTCCTGCTGCAAGAAAACAAGACTGTGATTTCACA...TGATGTAGAGAAATGATTGTGCGAGGTTTCCCCACTCAAGAAAGGTGGGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | CTGATCCTGGTCCCACAAGTTCCTCATCTGTTAACTTaGTGTCATTCTGGATGTGTGGGAAGAGCACACATG | + |
Preference number: 3 (lower is better) Translates to: LILVPQVPHLLT*CHSGCVGRAHM Trigger: CATGTGTGCTCTTCCCACACATCCAGAATGACATCAAGTTAACAGATGAGGAACTTGTGGGACCAGGATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | TGTCCCCGTAAACAACATTGGTGCAGTTTACTTGGGTaGGGTATGGCCACTCAAGAGTCTATCTTACTTCCC | + |
Preference number: 3 (lower is better) Translates to: CPRKQHWCSLLG*GMATQESILLP Trigger: GGGAAGTAAGATAGACTCTTGAGTGGCCATACCTCACCCAAGTAAACTGCACCAATGTTGTTTACGGGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | AAAGGTGGGACCCTGGATGGATACATTCATTACTTCTaGAGACACTCTGGGGACTTTATACCTGGATGTCCA | + |
Preference number: 3 (lower is better) Translates to: KGGTLDGYIHYF*RHSGDFIPGCP Trigger: TGGACATCCAGGTATAAAGTCCCCAGAGTGTCTCCAGAAGTAATGAATGTATCCATCCAGGGTCCCACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | AGTGGATCTGCATGGAAAGGTGCTTGTTTTAAGCTGTaGGTATCAAGACAGTCGCCCTGTGTGAATGATTCC | + |
Preference number: 3 (lower is better) Translates to: SGSAWKGACFKL*VSRQSPCVNDS Trigger: GGAATCATTCACACAGGGCGACTGTCTTGATACCCACAGCTTAAAACAAGCACCTTTCCATGCAGATCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | ATGGAGAGAAATGACATATGTCAGCATCAAATGTTTTaGGGATGCTGGAAGGTAAGGAGATGGAGGGCCACC | + |
Preference number: 3 (lower is better) Translates to: MERNDICQHQMF*GCWKVRRWRAT Trigger: GGTGGCCCTCCATCTCCTTACCTTCCAGCATCCCCAAAACATTTGATGCTGACATATGTCATTTCTCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | AAGTCAGGGTCAGCAACCTTTGCTTTAATGCCTTTCTaGCCACATATTTTGGCATCTCAGTCTCTCGTGCCT | + |
Preference number: 3 (lower is better) Translates to: KSGSATFALMPF*PHILASQSLVP Trigger: AGGCACGAGAGACTGAGATGCCAAAATATGTGGTCAGAAAGGCATTAAAGCAAAGGTTGCTGACCCTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | AAGTCGCACATTGCATCAATGAGCACTCTTGCTATCTaGATACTTGATGTGTGCTCCTTCTGCCGCAAACCA | + |
Preference number: 3 (lower is better) Translates to: KSHIASMSTLAI*ILDVCSFCRKP Trigger: TGGTTTGCGGCAGAAGGAGCACACATCAAGTATTCAGATAGCAAGAGTGCTCATTGATGCAATGTGCGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | TTGGACAATCAAGATGGAGAAGGAGGAGGCCCCATTTaGTATTTAATAGTAGGATGTTGGTTTGCACTTCCC | + |
Preference number: 3 (lower is better) Translates to: LDNQDGEGGGPI*YLIVGCWFALP Trigger: GGGAAGTGCAAACCAACATCCTACTATTAAATACCAAATGGGGCCTCCTCCTTCTCCATCTTGATTGTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR TCA 72 bp | AGTTCAGCCGTTTACTTTCTTGACATTTATGAGCAGTaGGCCCTTGTTAGGAAGACCCCTGATGTGAAATCA | + |
Preference number: 3 (lower is better) Translates to: SSAVYFLDIYEQ*ALVRKTPDVKS Trigger: TGATTTCACATCAGGGGTCTTCCTAACAAGGGCTCACTGCTCATAAATGTCAAGAAAGTAAACGGCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR GCA 72 bp | AGAGAAGAAGCCACACGTGGGAAGATGAAATGTATGTaGCTCAAACTTATGACCCATAGAGCCAATAAAAGT | + |
Preference number: 3 (lower is better) Translates to: REEATRGKMKCM*LKLMTHRANKS Trigger: ACTTTTATTGGCTCTATGGGTCATAAGTTTGAGGCACATACATTTCATCTTCCCACGTGTGGCTTCTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CCA 72 bp | ATATTAGCAAATTCCACACATACAGGTGTACACTATTaGCATAGAGGTTCATGCCAGACAATTTCACTACTT | + |
Preference number: 3 (lower is better) Translates to: ILANSTHTGVHY*HRGSCQTISLL Trigger: AAGTAGTGAAATTGTCTGGCATGAACCTCTATGCCAATAGTGTACACCTGTATGTGTGGAATTTGCTAATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR GCA 90 bp | CGTCTCTACCCAGACTTGGTAGGCTGCACTCTTCCCTTCCACCCGTGCCCAGGGCCGCGGCCGGGCTCCTaGACCGTCACGTTGATGAGC | + |
Preference number: 4 (lower is better) Translates to: RLYPDLVGCTLPFHPCPGPRPGS*TVTLMS Trigger: GCTCATCAACGTGACGGTGCAGGAGCCCGGCCGCGG...CCCTGGGCACGGGTGGAAGGGAAGAGTGCAGCCTACCAAGTCTGGGTAGAGACG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR TCA 90 bp | TGCAGGAAAGGGACAAAGCAGATGACTGATCCTGTGACGGCAGACTCTGGGCCCGACCTCGGCCTTGGGTaGGTCGAGCCCGTAGCGCCC | + |
Preference number: 4 (lower is better) Translates to: CRKGTKQMTDPVTADSGPDLGLG*VEPVAP Trigger: GGGCGCTACGGGCTCGACTCACCCAAGGCCGAGGTC...GGGCCCAGAGTCTGCCGTCACAGGATCAGTCATCTGCTTTGTCCCTTTCCTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CCA 90 bp | ACTCTTGATGGTAGAGCCTGGCTTTCCCAAGAGGGGAACAAAGGTGGGACCCTGAGCGGTGCCAGCACCTaGCCGCGGACCTCGGCCTTG | + |
Preference number: 4 (lower is better) Translates to: TLDGRAWLSQEGNKGGTLSGAST*PRTSAL Trigger: CAAGGCCGAGGTCCGCGGCCAGGTGCTGGCACCGCT...CAGGGTCCCACCTTTGTTCCCCTCTTGGGAAAGCCAGGCTCTACCATCAAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CCA 90 bp | AGCGGAGATGGTGACTTCAGCCCAAGGAACCTGCCTTACTCCTGTTGCTCCTCACGCGGACCTCGGCCTTaGGTGAGTCGAGCCCGTAGC | + |
Preference number: 4 (lower is better) Translates to: SGDGDFSPRNLPYSCCSSRGPRP*VSRARS Trigger: GCTACGGGCTCGACTCACCCAAGGCCGAGGTCCGCG...TGAGGAGCAACAGGAGTAAGGCAGGTTCCTTGGGCTGAAGTCACCATCTCCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR TCA 90 bp | CGTGCCCAGGGAACTGTCCCCTTGAGGCTCACCCTCATCTCACCTGCTCTCCCTAGGTACAGTGTTCACTaGGCCAGGGATCCACACAGG | + |
Preference number: 4 (lower is better) Translates to: RAQGTVPLRLTLISPALPRYSVH*ARDPHR Trigger: CCTGTGTGGATCCCTGGCTCAGTGAACACTGTACCT...AGGGAGAGCAGGTGAGATGAGGGTGAGCCTCAAGGGGACAGTTCCCTGGGCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CCA 90 bp | TGCAGGAAAGGGACAAAGCAGATGACTGATCCTGTGACGGCAGACTCTGGGCCCCAGCAACTCCGTGGATaGGCAGCGGTGCCAGCACCT | + |
Preference number: 4 (lower is better) Translates to: CRKGTKQMTDPVTADSGPQQLRG*AAVPAP Trigger: AGGTGCTGGCACCGCTGCCCATCCACGGAGTTGCTG...GGGCCCAGAGTCTGCCGTCACAGGATCAGTCATCTGCTTTGTCCCTTTCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 72 bp | CTCCTGTTGCTCCTCATGACCCGTCTCTACCCAGACTaGGTAGGCTGCACTCTTCCCTTCCACCCGTGCCCA | + |
Preference number: 4 (lower is better) Translates to: LLLLLMTRLYPD*VGCTLPFHPCP Trigger: TGGGCACGGGTGGAAGGGAAGAGTGCAGCCTACCAAGTCTGGGTAGAGACGGGTCATGAGGAGCAACAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR TCA 90 bp | TTTCTGACCACATATTTTGGCATCTCAGTCTCTCGTGCCTCAGAGCAGATGAGAGGTCGATGCGGAACGTaGGCGGGGTGCCGCGGCCGG | + |
Preference number: 4 (lower is better) Translates to: FLTTYFGISVSRASEQMRGRCGT*AGCRGR Trigger: CCGGCCGCGGCACCCCGCTCACGTTCCGCATCGACC...TCTCATCTGCTCTGAGGCACGAGAGACTGAGATGCCAAAATATGTGGTCAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR GCA 90 bp | CCAGGCCCACCTTTCTTGAGTGGGGAAACCTCGCACAATCATTTCTCTACATCAGCGTCGGCCACAGGCTaGAAGTCAGCAGGGCCAGCG | + |
Preference number: 4 (lower is better) Translates to: PGPPFLSGETSHNHFSTSASATG*KSAGPA Trigger: CGCTGGCCCTGCTGACTTGCAGCCTGTGGCCGACGC...TGATGTAGAGAAATGATTGTGCGAGGTTTCCCCACTCAAGAAAGGTGGGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 72 bp | GTGGACCTAGGAGTTGTGCTGCCCACTTCCAGGGGGTaGACACATCTGACCGTCAAGAAGTCGGCTCACACT | + |
Preference number: 4 (lower is better) Translates to: VDLGVVLPTSRG*THLTVKKSAHT Trigger: AGTGTGAGCCGACTTCTTGACGGTCAGATGTGTCAACCCCCTGGAAGTGGGCAGCACAACTCCTAGGTCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR TCA 90 bp | AGCGGAGATGGTGACTTCAGCCCAAGGAACCTGCCTTACTCCTGTTGCTCCTCACTAGAGAGCCACGGCTaGAGTTCTTTGGCGGCATTC | + |
Preference number: 4 (lower is better) Translates to: SGDGDFSPRNLPYSCCSSLESHG*SSLAAF Trigger: GAATGCCGCCAAAGAACTTCAGCCGTGGCTCTCTAG...TGAGGAGCAACAGGAGTAAGGCAGGTTCCTTGGGCTGAAGTCACCATCTCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CCA 90 bp | ATCAACCATGTGGACCTAGGAGTTGTGCTGCCCACTTCCAGGGGGTTGACACATATACACCAGGCTGCGTaGCGACAGGGAGTTCTGGTG | + |
Preference number: 4 (lower is better) Translates to: INHVDLGVVLPTSRGLTHIHQAA*RQGVLV Trigger: CACCAGAACTCCCTGTCGCCACGCAGCCTGGTGTAT...ATGTGTCAACCCCCTGGAAGTGGGCAGCACAACTCCTAGGTCCACATGGTTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 72 bp | TCCAGGACAGTCAAATATGCCCAACCACTGAAGGGCTaGAGTGCCGAGATGCACCCCCAGCCTCTCAAGTCT | + |
Preference number: 4 (lower is better) Translates to: SRTVKYAQPLKG*SAEMHPQPLKS Trigger: AGACTTGAGAGGCTGGGGGTGCATCTCGGCACTCAAGCCCTTCAGTGGTTGGGCATATTTGACTGTCCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR GCA 90 bp | ATACTTGATGTGTGCTCCTTCTGCCGCAAACCACCCACTGGTGAGAGGAAGTCCGATGGCTTTCTTGGCTaGGTCTCCAAGACGACGCTG | + |
Preference number: 4 (lower is better) Translates to: ILDVCSFCRKPPTGERKSDGFLG*VSKTTL Trigger: CAGCGTCGTCTTGGAGACGCAGCCAAGAAAGCCATC...GGACTTCCTCTCACCAGTGGGTGGTTTGCGGCAGAAGGAGCACACATCAAGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR GCA 90 bp | ACTCTTGATGGTAGAGCCTGGCTTTCCCAAGAGGGGAACAAAGGTGGGACCCTGTTTCATACACCAGGCTaGGTGGCGACAGGGAGTTCT | + |
Preference number: 4 (lower is better) Translates to: TLDGRAWLSQEGNKGGTLFHTPG*VATGSS Trigger: AGAACTCCCTGTCGCCACGCAGCCTGGTGTATGAAA...CAGGGTCCCACCTTTGTTCCCCTCTTGGGAAAGCCAGGCTCTACCATCAAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 72 bp | AAGTCTGGTTGCCAGCGCTCCAGTGTTTCTTTCATGTaGGTGCTGAGGCTGGCAGGATGGCACTGGATTGGA | + |
Preference number: 4 (lower is better) Translates to: KSGCQRSSVSFM*VLRLAGWHWIG Trigger: TCCAATCCAGTGCCATCCTGCCAGCCTCAGCACCAACATGAAAGAAACACTGGAGCGCTGGCAACCAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR GCA 90 bp | TGCAGGAAAGGGACAAAGCAGATGACTGATCCTGTGACGGCAGACTCTGGGCCCGCTTTCTATGCAGACTaGACAGTGATCGAAGTCTGG | + |
Preference number: 4 (lower is better) Translates to: CRKGTKQMTDPVTADSGPAFYAD*TVIEVW Trigger: CCAGACTTCGATCACTGTGCAGTCTGCATAGAAAGC...GGGCCCAGAGTCTGCCGTCACAGGATCAGTCATCTGCTTTGTCCCTTTCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR TCA 90 bp | CTTTCTGACCACATATTTTGGCATCTCAGTCTCTCGTGCCTCAGAGCAGATGAGGTGAGCTCCCCATCTTaGGGAAGAGGCGATATCCCC | + |
Preference number: 4 (lower is better) Translates to: LSDHIFWHLSLSCLRADEVSSPS*GRGDIP Trigger: GGGGATATCGCCTCTTCCTCAAGATGGGGAGCTCAC...CTCATCTGCTCTGAGGCACGAGAGACTGAGATGCCAAAATATGTGGTCAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR GCA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGTGTGGAAAACATGCTTaGAGGGGAGAACCCGAACAA | + |
Preference number: 4 (lower is better) Translates to: DVTCKYWNLQRAEGTASQCGKHA*RGEPEQ Trigger: TTGTTCGGGTTCTCCCCTGCAAGCATGTTTTCCACA...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR GCA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGGTGCCCACTTGTTACTaGAATGTTGATTTCACCCGT | + |
Preference number: 4 (lower is better) Translates to: DVTCKYWNLQRAEGTASQVPTCY*NVDFTR Trigger: ACGGGTGAAATCAACATTGCAGTAACAAGTGGGCAC...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CCA 90 bp | GCCTCTCAAGTCTTCATGACTACTCTGTCTTCACTCCGGGTGCACCAGTCAGATACGGCTGAAGTTCTTTaGCGGCATTCGAGTTCCAAC | + |
Preference number: 4 (lower is better) Translates to: ASQVFMTTLSSLRVHQSDTAEVL*RHSSSN Trigger: GTTGGAACTCGAATGCCGCCAAAGAACTTCAGCCGT...ATCTGACTGGTGCACCCGGAGTGAAGACAGAGTAGTCATGAAGACTTGAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR TCA 90 bp | TGGGACCCTGGATGGATACATTCATTACTTCTGGAGACACTCTGGGGACTTTATGGATCACAGCCCAGATaGTCAGCAACTCCGTGGATG | + |
Preference number: 4 (lower is better) Translates to: WDPGWIHSLLLETLWGLYGSQPR*SATPWM Trigger: CATCCACGGAGTTGCTGATCATCTGGGCTGTGATCC...ATAAAGTCCCCAGAGTGTCTCCAGAAGTAATGAATGTATCCATCCAGGGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR TCA 90 bp | AAGGGGGTCAACTTGGATATCTGGAGAGCTATTCTGAGTGAATCCCTTCACAGGCTGGATGAGTCATGGTaGCCGGCTCCTCTTTGGATT | + |
Preference number: 4 (lower is better) Translates to: KGVNLDIWRAILSESLHRLDESW*PAPLWI Trigger: AATCCAAAGAGGAGCCGGTCACCATGACTCATCCAG...CCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CCA 90 bp | CACTCCGGGTGCACCAGTCAGATACACAGTGAGAACTTTATAAAAAGACGGTCACCCCGAAGTTCTCAGTaGCTCAAGGCCAAGGGAACT | + |
Preference number: 4 (lower is better) Translates to: HSGCTSQIHSENFIKRRSPRSSQ*LKAKGT Trigger: AGTTCCCTTGGCCTTGAGCCACTGAGAACTTCGGGG...TGACCGTCTTTTTATAAAGTTCTCACTGTGTATCTGACTGGTGCACCCGGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 72 bp | TTGGGGGAACACTGTAATTTAACCCTGAACCCCAACTaGTGCCCAGAGGTACTGCCATTCTTCCCAGATGGA | + |
Preference number: 4 (lower is better) Translates to: LGEHCNLTLNPN*CPEVLPFFPDG Trigger: TCCATCTGGGAAGAATGGCAGTACCTCTGGGCACAAGTTGGGGTTCAGGGTTAAATTACAGTGTTCCCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 72 bp | CTCACTCGCGCAATAATGCTGCCATCAAACCTCACCTaGGGGGAACACTGTAATTTAACCCTGAACCCCAAC | + |
Preference number: 4 (lower is better) Translates to: LTRAIMLPSNLT*GEHCNLTLNPN Trigger: GTTGGGGTTCAGGGTTAAATTACAGTGTTCCCCCAAGGTGAGGTTTGATGGCAGCATTATTGCGCGAGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 72 bp | AAGCAAGGCTTAGTGGGCCTTGGGAGTTTTAAACTCTaGATGGTAGAGCCTGGCTTTCCCAAGAGGGGAACA | + |
Preference number: 4 (lower is better) Translates to: KQGLVGLGSFKL*MVEPGFPKRGT Trigger: TGTTCCCCTCTTGGGAAAGCCAGGCTCTACCATCAAGAGTTTAAAACTCCCAAGGCCCACTAAGCCTTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR TCA 90 bp | CCAGGCCCACCTTTCTTGAGTGGGGAAACCTCGCACAATCATTTCTCTACATCAACAGCAACCGCATTGTaGAAAGCAGCCCGTGATATT | + |
Preference number: 4 (lower is better) Translates to: PGPPFLSGETSHNHFSTSTATAL*KAARDI Trigger: AATATCACGGGCTGCTTTTCACAATGCGGTTGCTGT...TGATGTAGAGAAATGATTGTGCGAGGTTTCCCCACTCAAGAAAGGTGGGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR TCA 90 bp | CTTTCTGACCACATATTTTGGCATCTCAGTCTCTCGTGCCTCAGAGCAGATGAGATGCAGACTGCACAGTaGTCGAAGTCTGGGTCTGTT | + |
Preference number: 4 (lower is better) Translates to: LSDHIFWHLSLSCLRADEMQTAQ*SKSGSV Trigger: AACAGACCCAGACTTCGATCACTGTGCAGTCTGCAT...CTCATCTGCTCTGAGGCACGAGAGACTGAGATGCCAAAATATGTGGTCAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CCA 90 bp | TGCAGGAAAGGGACAAAGCAGATGACTGATCCTGTGACGGCAGACTCTGGGCCCTACATTATCAGTACATaGCAGATTTGGCACAATTCC | + |
Preference number: 4 (lower is better) Translates to: CRKGTKQMTDPVTADSGPYIIST*QIWHNS Trigger: GGAATTGTGCCAAATCTGCCATGTACTGATAATGTA...GGGCCCAGAGTCTGCCGTCACAGGATCAGTCATCTGCTTTGTCCCTTTCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR GCA 90 bp | AAGGGGGTCAACTTGGATATCTGGAGAGCTATTCTGAGTGAATCCCTTCACAGGGATTTGTGGAAAACATaGTTGCAGGGGAGAACCCGA | + |
Preference number: 4 (lower is better) Translates to: KGVNLDIWRAILSESLHRDLWKT*LQGRTR Trigger: TCGGGTTCTCCCCTGCAAGCATGTTTTCCACAAATC...CCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CCA 90 bp | TGGGACCCTGGATGGATACATTCATTACTTCTGGAGACACTCTGGGGACTTTATTCCACACAGGATTTGTaGAAAACATGCTTGCAGGGG | + |
Preference number: 4 (lower is better) Translates to: WDPGWIHSLLLETLWGLYSTQDL*KTCLQG Trigger: CCCCTGCAAGCATGTTTTCCACAAATCCTGTGTGGA...ATAAAGTCCCCAGAGTGTCTCCAGAAGTAATGAATGTATCCATCCAGGGTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 72 bp | ACAGATGCCTCCCATGTCCAGTGCCTATGTAAATCCTaGTCATCTTATGTCATGCCCATCACAGATGCAGGA | + |
Preference number: 4 (lower is better) Translates to: TDASHVQCLCKS*SSYVMPITDAG Trigger: TCCTGCATCTGTGATGGGCATGACATAAGATGACAAGGATTTACATAGGCACTGGACATGGGAGGCATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 72 bp | GCTGATCCTGGTCCCACAAGTTCCTCATCTGTTAACTaGATGTCATTCTGGATGTGTGGGAAGAGCACACAT | + |
Preference number: 4 (lower is better) Translates to: ADPGPTSSSSVN*MSFWMCGKSTH Trigger: ATGTGTGCTCTTCCCACACATCCAGAATGACATCAAGTTAACAGATGAGGAACTTGTGGGACCAGGATCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR TCA 90 bp | AAGGGGGTCAACTTGGATATCTGGAGAGCTATTCTGAGTGAATCCCTTCACAGGGTGAAAAGCAGCCCGTaGTATTTTCTCTTTAAAGGT | + |
Preference number: 4 (lower is better) Translates to: KGVNLDIWRAILSESLHRVKSSP*YFLFKG Trigger: ACCTTTAAAGAGAAAATATCACGGGCTGCTTTTCAC...CCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 72 bp | TTTTCTGTCCCCGTAAACAACATTGGTGCAGTTTACTaGGGTGAGGTATGGCCACTCAAGAGTCTATCTTAC | + |
Preference number: 4 (lower is better) Translates to: FSVPVNNIGAVY*GEVWPLKSLSY Trigger: GTAAGATAGACTCTTGAGTGGCCATACCTCACCCAAGTAAACTGCACCAATGTTGTTTACGGGGACAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR TCA 90 bp | AAGGGGGTCAACTTGGATATCTGGAGAGCTATTCTGAGTGAATCCCTTCACAGGGAATATGAGCCACGCTaGAGAAATAATCATCAAAAC | + |
Preference number: 4 (lower is better) Translates to: KGVNLDIWRAILSESLHREYEPR*RNNHQN Trigger: GTTTTGATGATTATTTCTTCAGCGTGGCTCATATTC...CCTGTGAAGGGATTCACTCAGAATAGCTCTCCAGATATCCAAGTTGACCCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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3UTR CAA 72 bp | GACAGATTAGACATGAAGAAAATGATTAGCTGGGATTaGAGTTTTGGTTATGGAGAAGACAAGGCCGGGCTT | + |
Preference number: 4 (lower is better) Translates to: DRLDMKKMISWD*SFGYGEDKAGL Trigger: AAGCCCGGCCTTGTCTTCTCCATAACCAAAACTCAAATCCCAGCTAATCATTTTCTTCATGTCTAATCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS TCA 90 bp | GATGGGCAGCGGTGCCAGCACCTGGCCGCGGACCTCGGCCTTGGGTaGGTCGAGCCCGTAGCGCCCGCGGTCGATGCGGAACGTGAGCGG | + |
Preference number: 5 (lower is better) Translates to: DGQRCQHLAADLGLG*VEPVAPAVDAERER Trigger: CCGCTCACGTTCCGCATCGACCGCGGGCGCTACGGGCTCGACTCACCCAAGGCCGAGGTCCGCGGCCAGGTGCTGGCACCGCTGCCCATC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS GCA 90 bp | TGTAGTACTCCTGGCTCGCGTTGTCCGCTCGCGTCGGCCACAGGCTaGAAGTCAGCAGGGCCAGCGCCGCGAGCCGGGCCGGGCCCGCTC | + |
Preference number: 5 (lower is better) Translates to: CSTPGSRCPLASATG*KSAGPAPRAGPGPL Trigger: GAGCGGGCCCGGCCCGGCTCGCGGCGCTGGCCCTGCTGACTTGCAGCCTGTGGCCGACGCGAGCGGACAACGCGAGCCAGGAGTACTACA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS-3UTR CAA 90 bp | ACTCTTGATGGTAGAGCCTGGCTTTCCCAAGAGGGGAACAAAGGTGGGACCCTGTACTCCTGGCTCGCGTaGTCCGCTCGCGTCGGCCAC | + |
Preference number: 5 (lower is better) Translates to: TLDGRAWLSQEGNKGGTLYSWLA*SARVGH Trigger: GTGGCCGACGCGAGCGGACAACGCGAGCCAGGAGTA...CAGGGTCCCACCTTTGTTCCCCTCTTGGGAAAGCCAGGCTCTACCATCAAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS CCA 90 bp | GAGCTCCCCATCTTGAGGAAGAGGCGATATCCCCGAAGTTCTCAGTaGCTCAAGGCCAAGGGAACTGTCACCGGCAAGGTCACCAAGGGC | + |
Preference number: 5 (lower is better) Translates to: ELPILRKRRYPRSSQ*LKAKGTVTGKVTKG Trigger: GCCCTTGGTGACCTTGCCGGTGACAGTTCCCTTGGCCTTGAGCCACTGAGAACTTCGGGGATATCGCCTCTTCCTCAAGATGGGGAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS GCA 90 bp | TGGCTCAAGGCCAAGGGAACTGTCACCGGCAAGGTCACCAAGGGCTaGTCTCCGGTTAACCGCTTGGGTTCTGGTCAGCCTTTCCATATC | + |
Preference number: 5 (lower is better) Translates to: WLKAKGTVTGKVTKG*SPVNRLGSGQPFHI Trigger: GATATGGAAAGGCTGACCAGAACCCAAGCGGTTAACCGGAGAGCAGCCCTTGGTGACCTTGCCGGTGACAGTTCCCTTGGCCTTGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS GCA 90 bp | GCGTGGCGACAGGGAGTTCTGGTGAAAGACGTGCCCACTTGTTACTaGAATGTTGATTTCACCCGTGCGAGGAGTGAGCTCCCCATCTTG | + |
Preference number: 5 (lower is better) Translates to: AWRQGVLVKDVPTCY*NVDFTRARSELPIL Trigger: CAAGATGGGGAGCTCACTCCTCGCACGGGTGAAATCAACATTGCAGTAACAAGTGGGCACGTCTTTCACCAGAACTCCCTGTCGCCACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CAA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGTCTCCGGTTAACCGCTaGGGTTCTGGTCAGCCTTTC | + |
Preference number: 5 (lower is better) Translates to: DVTCKYWNLQRAEGTASQSPVNR*GSGQPF Trigger: GAAAGGCTGACCAGAACCCAAGCGGTTAACCGGAGA...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CAA 90 bp | AGCGGAGATGGTGACTTCAGCCCAAGGAACCTGCCTTACTCCTGTTGCTCCTCAAGTGAGCTCCCCATCTaGAGGAAGAGGCGATATCCC | + |
Preference number: 5 (lower is better) Translates to: SGDGDFSPRNLPYSCCSSSELPI*RKRRYP Trigger: GGGATATCGCCTCTTCCTCAAGATGGGGAGCTCACT...TGAGGAGCAACAGGAGTAAGGCAGGTTCCTTGGGCTGAAGTCACCATCTCCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS TCA 90 bp | ACTGCAATGTTGATTTCACCCGTGCGAGGAGTGAGCTCCCCATCTTaGGGAAGAGGCGATATCCCCGAAGTTCTCAGTGGCTCAAGGCCA | + |
Preference number: 5 (lower is better) Translates to: TAMLISPVRGVSSPS*GRGDIPEVLSGSRP Trigger: TGGCCTTGAGCCACTGAGAACTTCGGGGATATCGCCTCTTCCTCAAGATGGGGAGCTCACTCCTCGCACGGGTGAAATCAACATTGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS-3UTR CAA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGGACAAAGAACCGTGTTaGAGGATCACAGCCCAGATG | + |
Preference number: 5 (lower is better) Translates to: DVTCKYWNLQRAEGTASQDKEPC*RITAQM Trigger: CATCTGGGCTGTGATCCTCAAACACGGTTCTTTGTC...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CAA 90 bp | GATGTGACCTGTAAATACTGGAATCTGCAGAGAGCCGAGGGGACAGCCAGCCAGCTTGTTACTGCAATGTaGATTTCACCCGTGCGAGGA | + |
Preference number: 5 (lower is better) Translates to: DVTCKYWNLQRAEGTASQLVTAM*ISPVRG Trigger: TCCTCGCACGGGTGAAATCAACATTGCAGTAACAAG...CTGGCTGGCTGTCCCCTCGGCTCTCTGCAGATTCCAGTATTTACAGGTCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CAA 90 bp | CCTCTCATCCCTCCAGGTGTCCCACCTTGCCGTCTGCCTAAGGCATGTTCTGAGGAGTTCCAACAGCTATaGTCATTTGTACAGAGATGT | + |
Preference number: 5 (lower is better) Translates to: PLIPPGVPPCRLPKACSEEFQQL*SFVQRC Trigger: ACATCTCTGTACAAATGACAATAGCTGTTGGAACTC...CTCAGAACATGCCTTAGGCAGACGGCAAGGTGGGACACCTGGAGGGATGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CAA 90 bp | ATCAACCATGTGGACCTAGGAGTTGTGCTGCCCACTTCCAGGGGGTTGACACATGGATCCACACAGGATTaGTGGAAAACATGCTTGCAG | + |
Preference number: 5 (lower is better) Translates to: INHVDLGVVLPTSRGLTHGSTQD*WKTCLQ Trigger: CTGCAAGCATGTTTTCCACAAATCCTGTGTGGATCC...ATGTGTCAACCCCCTGGAAGTGGGCAGCACAACTCCTAGGTCCACATGGTTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS CCA 90 bp | AGAAGGTTCAATTGTGGAGAATTCACTTTCATACACCAGGCTGCGTaGCGACAGGGAGTTCTGGTGAAAGACGTGCCCACTTGTTACTGC | + |
Preference number: 5 (lower is better) Translates to: RRFNCGEFTFIHQAA*RQGVLVKDVPTCYC Trigger: GCAGTAACAAGTGGGCACGTCTTTCACCAGAACTCCCTGTCGCCACGCAGCCTGGTGTATGAAAGTGAATTCTCCACAATTGAACCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CAA 90 bp | ATCAACCATGTGGACCTAGGAGTTGTGCTGCCCACTTCCAGGGGGTTGACACATAAGGCGATCCACTGTTaGATATTAGGAGGGACAAAG | + |
Preference number: 5 (lower is better) Translates to: INHVDLGVVLPTSRGLTHKAIHC*ILGGTK Trigger: CTTTGTCCCTCCTAATATCAAACAGTGGATCGCCTT...ATGTGTCAACCCCCTGGAAGTGGGCAGCACAACTCCTAGGTCCACATGGTTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS GCA 90 bp | CCAAAGAAGGTTCAATTGTGGAGAATTCACTTTCATACACCAGGCTaGGTGGCGACAGGGAGTTCTGGTGAAAGACGTGCCCACTTGTTA | + |
Preference number: 5 (lower is better) Translates to: PKKVQLWRIHFHTPG*VATGSSGERRAHLL Trigger: TAACAAGTGGGCACGTCTTTCACCAGAACTCCCTGTCGCCACGCAGCCTGGTGTATGAAAGTGAATTCTCCACAATTGAACCTTCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS-3UTR CAA 90 bp | CTTTCTGACCACATATTTTGGCATCTCAGTCTCTCGTGCCTCAGAGCAGATGAGTTACTGATGGCTTTCTaGGCTGCGTCTCCAAGACGA | + |
Preference number: 5 (lower is better) Translates to: LSDHIFWHLSLSCLRADELLMAF*AASPRR Trigger: TCGTCTTGGAGACGCAGCCAAGAAAGCCATCAGTAA...CTCATCTGCTCTGAGGCACGAGAGACTGAGATGCCAAAATATGTGGTCAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS GCA 90 bp | TGCAGGGGAGAACCCGAACAACATCATTCTGCTTATAGCTTTCTATaGAGACTGCACAGTGATCGAAGTCTGGGTCTGTTTCCTTATCGC | + |
Preference number: 5 (lower is better) Translates to: CRGEPEQHHSAYSFL*RLHSDRSLGLFPYR Trigger: GCGATAAGGAAACAGACCCAGACTTCGATCACTGTGCAGTCTGCATAGAAAGCTATAAGCAGAATGATGTTGTTCGGGTTCTCCCCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS-3UTR CAA 90 bp | AAGCAAGGTCCTAACACAGGCACCTCAGTCCCAGCATTCCTTCTGGTCCTTTTCCCAAAGAAGGTTCAATaGTGGAGAATTCACTTTCAT | + |
Preference number: 5 (lower is better) Translates to: KQGPNTGTSVPAFLLVLFPKKVQ*WRIHFH Trigger: ATGAAAGTGAATTCTCCACAATTGAACCTTCTTTGG...GAAAAGGACCAGAAGGAATGCTGGGACTGAGGTGCCTGTGTTAGGACCTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS GCA 90 bp | GAGAACCCGAACAACATCATTCTGCTTATAGCTTTCTATGCAGACTaGACAGTGATCGAAGTCTGGGTCTGTTTCCTTATCGCCCTTTTT | + |
Preference number: 5 (lower is better) Translates to: ENPNNIILLIAFYAD*TVIEVWVCFLIALF Trigger: AAAAAGGGCGATAAGGAAACAGACCCAGACTTCGATCACTGTGCAGTCTGCATAGAAAGCTATAAGCAGAATGATGTTGTTCGGGTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CCA 90 bp | ATTCTGCTTATAGCTTTCTATGCAGACTGCACAGTGATCGAAGTCTaGGTCTGTTTCCTTATCGCCCTTTTTCACCGTTCTAGTTGTCAA | + |
Preference number: 5 (lower is better) Translates to: ILLIAFYADCTVIEV*VCFLIALFHRSSCQ Trigger: TTGACAACTAGAACGGTGAAAAAGGGCGATAAGGAAACAGACCCAGACTTCGATCACTGTGCAGTCTGCATAGAAAGCTATAAGCAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS GCA 72 bp | CCTGGCTCGCGTTGTCCGCTCGCGTCGGCCACAGGCTaGAAGTCAGCAGGGCCAGCGCCGCGAGCCGGGCCG | + |
Preference number: 6 (lower is better) Translates to: PGSRCPLASATG*KSAGPAPRAGP Trigger: CGGCCCGGCTCGCGGCGCTGGCCCTGCTGACTTGCAGCCTGTGGCCGACGCGAGCGGACAACGCGAGCCAGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS TCA 72 bp | AGTCGAGCCCGTAGCGCCCGCGGTCGATGCGGAACGTaGGCGGGGTGCCGCGGCCGGGCTCCTGCACCGTCA | + |
Preference number: 6 (lower is better) Translates to: SRARSARGRCGT*AGCRGRAPAPS Trigger: TGACGGTGCAGGAGCCCGGCCGCGGCACCCCGCTCACGTTCCGCATCGACCGCGGGCGCTACGGGCTCGACT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CCA 72 bp | GCAGCGGTGCCAGCACCTGGCCGCGGACCTCGGCCTTaGGTGAGTCGAGCCCGTAGCGCCCGCGGTCGATGC | + |
Preference number: 6 (lower is better) Translates to: AAVPAPGRGPRP*VSRARSARGRC Trigger: GCATCGACCGCGGGCGCTACGGGCTCGACTCACCCAAGGCCGAGGTCCGCGGCCAGGTGCTGGCACCGCTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS TCA 72 bp | CGGTGCCAGCACCTGGCCGCGGACCTCGGCCTTGGGTaGGTCGAGCCCGTAGCGCCCGCGGTCGATGCGGAA | + |
Preference number: 6 (lower is better) Translates to: RCQHLAADLGLG*VEPVAPAVDAE Trigger: TTCCGCATCGACCGCGGGCGCTACGGGCTCGACTCACCCAAGGCCGAGGTCCGCGGCCAGGTGCTGGCACCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CCA 72 bp | TCAGCAACTCCGTGGATGGGCAGCGGTGCCAGCACCTaGCCGCGGACCTCGGCCTTGGGTGAGTCGAGCCCG | + |
Preference number: 6 (lower is better) Translates to: SATPWMGSGAST*PRTSALGESSP Trigger: CGGGCTCGACTCACCCAAGGCCGAGGTCCGCGGCCAGGTGCTGGCACCGCTGCCCATCCACGGAGTTGCTGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS GCA 72 bp | GCCAAGGGAACTGTCACCGGCAAGGTCACCAAGGGCTaGTCTCCGGTTAACCGCTTGGGTTCTGGTCAGCCT | + |
Preference number: 6 (lower is better) Translates to: AKGTVTGKVTKG*SPVNRLGSGQP Trigger: AGGCTGACCAGAACCCAAGCGGTTAACCGGAGAGCAGCCCTTGGTGACCTTGCCGGTGACAGTTCCCTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CCA 72 bp | ATCTTGAGGAAGAGGCGATATCCCCGAAGTTCTCAGTaGCTCAAGGCCAAGGGAACTGTCACCGGCAAGGTC | + |
Preference number: 6 (lower is better) Translates to: ILRKRRYPRSSQ*LKAKGTVTGKV Trigger: GACCTTGCCGGTGACAGTTCCCTTGGCCTTGAGCCACTGAGAACTTCGGGGATATCGCCTCTTCCTCAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CAA 72 bp | GGCAAGGTCACCAAGGGCTGCTCTCCGGTTAACCGCTaGGGTTCTGGTCAGCCTTTCCATATCAAAGGCTAC | + |
Preference number: 6 (lower is better) Translates to: GKVTKGCSPVNR*GSGQPFHIKGY Trigger: GTAGCCTTTGATATGGAAAGGCTGACCAGAACCCAAGCGGTTAACCGGAGAGCAGCCCTTGGTGACCTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CAA 72 bp | GTTGATTTCACCCGTGCGAGGAGTGAGCTCCCCATCTaGAGGAAGAGGCGATATCCCCGAAGTTCTCAGTGG | + |
Preference number: 6 (lower is better) Translates to: VDFTRARSELPI*RKRRYPRSSQW Trigger: CCACTGAGAACTTCGGGGATATCGCCTCTTCCTCAAGATGGGGAGCTCACTCCTCGCACGGGTGAAATCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CAA 90 bp | TACTGCAATGTTGATTTCACCCGTGCGAGGAGTGAGCTCCCCATCTaGAGGAAGAGGCGATATCCCCGAAGTTCTCAGTGGCTCAAGGCC | + |
Preference number: 6 (lower is better) Translates to: YCNVDFTRARSELPI*RKRRYPRSSQWLKA Trigger: GGCCTTGAGCCACTGAGAACTTCGGGGATATCGCCTCTTCCTCAAGATGGGGAGCTCACTCCTCGCACGGGTGAAATCAACATTGCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CCA 72 bp | GCAAGGTCACCAAGGGCTGCTCTCCGGTTAACCGCTTaGGTTCTGGTCAGCCTTTCCATATCAAAGGCTACA | + |
Preference number: 6 (lower is better) Translates to: ARSPRAALRLTA*VLVSLSISKAT Trigger: TGTAGCCTTTGATATGGAAAGGCTGACCAGAACCCAAGCGGTTAACCGGAGAGCAGCCCTTGGTGACCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS GCA 72 bp | CGTTCTAGTTGTCAATTTACTGATGGCTTTCTTGGCTaGGTCTCCAAGACGACGCTGGTTCCTGTCCCGAGC | + |
Preference number: 6 (lower is better) Translates to: RSSCQFTDGFLG*VSKTTLVPVPS Trigger: GCTCGGGACAGGAACCAGCGTCGTCTTGGAGACGCAGCCAAGAAAGCCATCAGTAAATTGACAACTAGAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS GCA 72 bp | CAGGGAGTTCTGGTGAAAGACGTGCCCACTTGTTACTaGAATGTTGATTTCACCCGTGCGAGGAGTGAGCTC | + |
Preference number: 6 (lower is better) Translates to: QGVLVKDVPTCY*NVDFTRARSEL Trigger: GAGCTCACTCCTCGCACGGGTGAAATCAACATTGCAGTAACAAGTGGGCACGTCTTTCACCAGAACTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS CAA 90 bp | ACTGTCACCGGCAAGGTCACCAAGGGCTGCTCTCCGGTTAACCGCTaGGGTTCTGGTCAGCCTTTCCATATCAAAGGCTACATTATCAGT | + |
Preference number: 6 (lower is better) Translates to: TVTGKVTKGCSPVNR*GSGQPFHIKGYIIS Trigger: ACTGATAATGTAGCCTTTGATATGGAAAGGCTGACCAGAACCCAAGCGGTTAACCGGAGAGCAGCCCTTGGTGACCTTGCCGGTGACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CAA 90 bp | CAAGGCGATCCACTGTTTGATATTAGGAGGGACAAAGAACCGTGTTaGAGGATCACAGCCCAGATGATCAGCAACTCCGTGGATGGGCAG | + |
Preference number: 6 (lower is better) Translates to: QGDPLFDIRRDKEPC*RITAQMISNSVDGQ Trigger: CTGCCCATCCACGGAGTTGCTGATCATCTGGGCTGTGATCCTCAAACACGGTTCTTTGTCCCTCCTAATATCAAACAGTGGATCGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS TCA 72 bp | TCATACACCAGGCTGCGTGGCGACAGGGAGTTCTGGTaGAAGACGTGCCCACTTGTTACTGCAATGTTGATT | + |
Preference number: 6 (lower is better) Translates to: SYTRLRGDREFW*KTCPLVTAMLI Trigger: AATCAACATTGCAGTAACAAGTGGGCACGTCTTTCACCAGAACTCCCTGTCGCCACGCAGCCTGGTGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS GCA 72 bp | GTTCAATTGTGGAGAATTCACTTTCATACACCAGGCTaGGTGGCGACAGGGAGTTCTGGTGAAAGACGTGCC | + |
Preference number: 6 (lower is better) Translates to: VQLWRIHFHTPG*VATGSSGERRA Trigger: GGCACGTCTTTCACCAGAACTCCCTGTCGCCACGCAGCCTGGTGTATGAAAGTGAATTCTCCACAATTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS CCA 72 bp | AATTGTGGAGAATTCACTTTCATACACCAGGCTGCGTaGCGACAGGGAGTTCTGGTGAAAGACGTGCCCACT | + |
Preference number: 6 (lower is better) Translates to: NCGEFTFIHQAA*RQGVLVKDVPT Trigger: AGTGGGCACGTCTTTCACCAGAACTCCCTGTCGCCACGCAGCCTGGTGTATGAAAGTGAATTCTCCACAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS CAA 72 bp | GTACAGTGTTCACTGAGCCAGGGATCCACACAGGATTaGTGGAAAACATGCTTGCAGGGGAGAACCCGAACA | + |
Preference number: 6 (lower is better) Translates to: VQCSLSQGSTQD*WKTCLQGRTRT Trigger: TGTTCGGGTTCTCCCCTGCAAGCATGTTTTCCACAAATCCTGTGTGGATCCCTGGCTCAGTGAACACTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CCA 72 bp | ATAGCTTTCTATGCAGACTGCACAGTGATCGAAGTCTaGGTCTGTTTCCTTATCGCCCTTTTTCACCGTTCT | + |
Preference number: 6 (lower is better) Translates to: IAFYADCTVIEV*VCFLIALFHRS Trigger: AGAACGGTGAAAAAGGGCGATAAGGAAACAGACCCAGACTTCGATCACTGTGCAGTCTGCATAGAAAGCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS GCA 72 bp | GAACCCGAACAACATCATTCTGCTTATAGCTTTCTATaGAGACTGCACAGTGATCGAAGTCTGGGTCTGTTT | + |
Preference number: 6 (lower is better) Translates to: EPEQHHSAYSFL*RLHSDRSLGLF Trigger: AAACAGACCCAGACTTCGATCACTGTGCAGTCTGCATAGAAAGCTATAAGCAGAATGATGTTGTTCGGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CCA 72 bp | TGTTCTCATCATACATGTCCAAAGAAGGTTCAATTGTaGAGAATTCACTTTCATACACCAGGCTGCGTGGCG | + |
Preference number: 6 (lower is better) Translates to: CSHHTCPKKVQL*RIHFHTPGCVA Trigger: CGCCACGCAGCCTGGTGTATGAAAGTGAATTCTCCACAATTGAACCTTCTTTGGACATGTATGATGAGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238748.2 |
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CDS GCA 72 bp | AACAACATCATTCTGCTTATAGCTTTCTATGCAGACTaGACAGTGATCGAAGTCTGGGTCTGTTTCCTTATC | + |
Preference number: 6 (lower is better) Translates to: NNIILLIAFYAD*TVIEVWVCFLI Trigger: GATAAGGAAACAGACCCAGACTTCGATCACTGTGCAGTCTGCATAGAAAGCTATAAGCAGAATGATGTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |
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CDS CAA 90 bp | GCTGAAGTTCTTTGGCGGCATTCGAGTTCCAACAGCTATTGTCATTaGTACAGAGATGTTTTTCTCCAGATAACTCAAAATATCCTTACC | + |
Preference number: 6 (lower is better) Translates to: AEVLWRHSSSNSYCH*YRDVFLQITQNILT Trigger: GGTAAGGATATTTTGAGTTATCTGGAGAAAAACATCTCTGTACAAATGACAATAGCTGTTGGAACTCGAATGCCGCCAAAGAACTTCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054684.14 ENSMUST00000102776.5 ENSMUST00000238748.2 |