Pregenerated sensors for RNF128 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031438Ensembl transcript IDs: ENSMUST00000113026.2, ENSMUST00000113027.8
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCATCAATATAAGCACCTaGAGACAAACCCCGACACAC | + |
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Preference number: 2 (lower is better) Translates to: CTGNKTQATQSRNKVRLFINIST*RQTPTH Trigger: GTGTGTCGGGGTTTGTCTCCAGGTGCTTATATTGAT...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| 3UTR-3UTR CCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACATCAATATAAGCACCTaGAGACAAACCCCGACACAC | + |
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Preference number: 2 (lower is better) Translates to: NTRLFYFCLNPVGICTGNINIST*RQTPTH Trigger: GTGTGTCGGGGTTTGTCTCCAGGTGCTTATATTGAT...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCTGTGGAAAACGGTACTaGGGTAAATATGTTAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: ANKNTRLFYFCLNPVGICCGKRY*GKYVKP Trigger: TGGCTTAACATATTTACCCCAGTACCGTTTTCCACA...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| 3UTR GCA 72 bp | CGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTaGACTGGGAACAAAACACAAGCCACACAAAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: RLFYFCLNPVGI*TGNKTQATQSR Trigger: TCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| 3UTR-3UTR CAA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACTCACCAAGAGGAAACTaGCCTATGAAAAACGTTATG | + |
|
Preference number: 3 (lower is better) Translates to: NTRLFYFCLNPVGICTGNSPRGN*PMKNVM Trigger: CATAACGTTTTTCATAGGCAAGTTTCCTCTTGGTGA...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| 3UTR-3UTR CAA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCTTCTATCCTGTGCTTTaGAAAACATCAAGCTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ANKNTRLFYFCLNPVGICFYPVL*KTSSLR Trigger: TCTCAAGCTTGATGTTTTCAAAAGCACAGGATAGAA...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| 3UTR TCA 72 bp | TGCGTCTTTTCAATAGCTCTATTTAACTTTGGTGGTTaGAGCTTCAAACTTTTTATTAAGGCACCTGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: CVFSIALFNFGG*SFKLFIKAPGI Trigger: GATTCCAGGTGCCTTAATAAAAAGTTTGAAGCTTCAACCACCAAAGTTAAATAGAGCTATTGAAAAGACGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR TCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGCCCGCCAGGACACGTTaGGGTACGCGGTCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGPARTR*GTRSTR Trigger: CCGTGTGGACCGCGTACCTCAACGTGTCCTGGCGGG...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR GCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGCGGGAACCGGGCGCGTaGGGACTCAGAGCCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGREPGA*GLRARR Trigger: CCTTCTGGCTCTGAGTCCGCACGCGCCCGGTTCCCG...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR GCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGCGGTTCACTCCGGTGTaGGGAACCCGCCAGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGRFTPV*GTRQDT Trigger: CGTGTCCTGGCGGGTTCCGCACACCGGAGTGAACCG...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR TCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCGCGGGTTACAGGCGTTaGGCGCCCCGGGCCCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ANKNTRLFYFCLNPVGICAGYRR*APRARR Trigger: CCGACGGGCCCGGGGCGCTCAACGCCTGTAACCCGC...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR TCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGGGTGAGACATGGGGATaGCCTCATTGCGGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGGETWG*PHCGSQ Trigger: CTGGGACCCGCAATGAGGTCATCCCCATGTCTCACC...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR CCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACTCCAGCGGCGAGTCCTaGCCGTACACGCCCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNSSGES*PYTPSS Trigger: CGAGGAGGGCGTGTACGGCCAGGACTCGCCGCTGGA...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR TCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGAAACCGTGGGCACCGTaGAATTGGTGTGCGGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGKPWAP*NWCAGY Trigger: GTAACCCGCACACCAATTTCACGGTGCCCACGGTTT...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR TCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGCTCCACCGCGTTGGATaGGGGCCAACCAAGATACTT | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGLHRVG*GPTKIL Trigger: AAGTATCTTGGTTGGCCCTCATCCAACGCGGTGGAG...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR GCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGAAGATACTTGCACCGTaGTCCCCCAAACCGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGKILAP*SPKPWA Trigger: TGCCCACGGTTTGGGGGAGCACGGTGCAAGTATCTT...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR CCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGGTTGGGTTGTCAACATaGGGAACAACATCCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGVGLST*GTTSTA Trigger: GGCCGTGGATGTTGTTCCCCATGTTGACAACCCAAC...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR TCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCTCCCCAGCACCCGGGTaGGACATGGGGATGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ANKNTRLFYFCLNPVGICSPAPG*DMGMTS Trigger: TGAGGTCATCCCCATGTCTCACCCGGGTGCTGGGGA...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR GCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGATGATGCAGTCTCACTaGGACTGTCCTCTTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGMMQSH*DCPLHG Trigger: CCCATGAAGAGGACAGTCGCAGTGAGACTGCATCAT...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR GCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCTCAGCTCCCACACCGTaGGGTTCACTCCGGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ANKNTRLFYFCLNPVGICSAPTP*GSLRCA Trigger: CGCACACCGGAGTGAACCGCACGGTGTGGGAGCTGA...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR GCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCGCCAACCAAGATACTTaGACCGTGCTCCCCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFANQDT*TVLPQT Trigger: GGTTTGGGGGAGCACGGTGCAAGTATCTTGGTTGGC...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR CCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCGCCATCTGTATCGTCTaGTTGCCCGTCTCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFAICIV*LPVSGE Trigger: TTCCCCAGAGACGGGCAACCAGACGATACAGATGGC...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
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| CDS-3UTR TCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCAGAAGCCCCTCTCTCTaGAGCCAGATGGATCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFRSPSL*SQMDLV Trigger: GACAAGATCCATCTGGCTTCAGAGAGAGGGGCTTCT...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR GCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGCTCCTTGTTTCAAGGTaGGCAGCTGAAGCTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGLLVSR*AAEAFQ Trigger: TTGGAAAGCTTCAGCTGCGCACCTTGAAACAAGGAG...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR CCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGCTGGTTGCCCGTCTCTaGGGAATTGTAAATCACAAC | + |
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Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGLVARL*GIVNHN Trigger: GTTGTGATTTACAATTCCCCAGAGACGGGCAACCAG...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
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| CDS-3UTR CCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGCGACTGTCCTCTTCATaGGGAGAGGCAGTATTAGAT | + |
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Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGRLSSS*GEAVLD Trigger: ATCTAATACTGCCTCTCCCCATGAAGAGGACAGTCG...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR TCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGGAGCAGAATAAAAGATaGAATAGCCCACGGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGEQNKR*NSPRLL Trigger: CAGCAACCGTGGGCTATTTCATCTTTTATTCTGCTC...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR TCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGCTCTGCTTCCTGCTTTaGGCTCTTGCATTTCGTAAT | + |
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Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGLCFLL*ALAFRN Trigger: ATTACGAAATGCAAGAGCTCAAAGCAGGAAGCAGAG...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR GCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCTCTGTATCGTCTGGTTaGCCGTCTCTGGGGAATTGT | + |
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Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFSVSSG*PSLGNC Trigger: ACAATTCCCCAGAGACGGGCAACCAGACGATACAGA...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
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| CDS-3UTR GCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGGCTTATAGAGCTCAATaGACACAGCACAGCTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGAYRAQ*TQHSYL Trigger: GAGATAGCTGTGCTGTGTGCATTGAGCTCTATAAGC...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR GCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGGATTGCAGGTTAGGATaGGCACCAAATCATTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGDCRLG*APNHLA Trigger: AGCCAAATGATTTGGTGCGCATCCTAACCTGCAATC...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR GCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACACCGTGAAATTGGTGTaGGGGTTACAGGCGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNTVKLV*GLQALS Trigger: GCTCAACGCCTGTAACCCGCACACCAATTTCACGGT...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR CCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACCTCTCTGAAGCCAGATaGATCTTGTCCGCGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNLSEAR*ILSAKV Trigger: CACCTTCGCGGACAAGATCCATCTGGCTTCAGAGAG...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR TCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGCACATAGGCGTTCATTaGAAACGATGCTGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGHIGVH*KRCCTL Trigger: CAAAGTACAGCATCGTTTTCAATGAACGCCTATGTG...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
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| CDS-3UTR TCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGGTCTTATGGAAAATATaGTTGCAGGTTAGGATGCGC | + |
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Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGVLWKI*LQVRMR Trigger: GCGCATCCTAACCTGCAATCATATTTTCCATAAGAC...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR GCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCACTGCCTCTGCTTCCTaGTTTGAGCTCTTGCATTTC | + |
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Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFTASAS*FELLHF Trigger: GAAATGCAAGAGCTCAAAGCAGGAAGCAGAGGCAGT...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR GCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACATGATGCAGTCTCACTaGGACTGTCCTCTTCATGGG | + |
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Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNMMQSH*DCPLHG Trigger: CCCATGAAGAGGACAGTCGCAGTGAGACTGCATCAT...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR GCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCCACGGCCACAGAATTTaGTTCATGGTTTACCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFHGHRI*FMVYQL Trigger: CAGCTGGTAAACCATGAAGCAAATTCTGTGGCCGTG...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR CCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACATGTTCCTCCAGAGGTaGCTCATCTGCTCCTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNMFLQR*LICSLY Trigger: GTACAAGGAGCAGATGAGCCACCTCTGGAGGAACAT...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR CCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGATCTTCTTCAAAGGTTaGGTTGTCAACATGGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGIFFKG*VVNMGN Trigger: GTTCCCCATGTTGACAACCCAACCTTTGAAGAAGAT...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR TCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCTCAGATTGCCAATCATaGTTGCAACAATGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFSDCQS*LQQCPQ Trigger: CTGGGGACATTGTTGCAATCATGATTGGCAATCTGA...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR TCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCGAGCAGAATAAAAGATaGAATAGCCCACGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFEQNKR*NSPRLL Trigger: CAGCAACCGTGGGCTATTTCATCTTTTATTCTGCTC...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR TCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCCTCTGCTTCCTGCTTTaGGCTCTTGCATTTCGTAAT | + |
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Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFLCFLL*ALAFRN Trigger: ATTACGAAATGCAAGAGCTCAAAGCAGGAAGCAGAG...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR GCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACACTGCCTCTGCTTCCTaGTTTGAGCTCTTGCATTTC | + |
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Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNTASAS*FELLHF Trigger: GAAATGCAAGAGCTCAAAGCAGGAAGCAGAGGCAGT...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR GCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACCTCCTTGTTTCAAGGTaGGCAGCTGAAGCTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNLLVSR*AAEAFQ Trigger: TTGGAAAGCTTCAGCTGCGCACCTTGAAACAAGGAG...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCGCTTATAGAGCTCAATaGACACAGCACAGCTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFAYRAQ*TQHSYL Trigger: GAGATAGCTGTGCTGTGTGCATTGAGCTCTATAAGC...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCGTTGGGTTGTCAACATaGGGAACAACATCCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ANKNTRLFYFCLNPVGICVGLST*GTTSTA Trigger: GGCCGTGGATGTTGTTCCCCATGTTGACAACCCAAC...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR GCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACATTGCCAATCATGATTaGAACAATGTCCCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNIANHD*NNVPST Trigger: GGTGCTGGGGACATTGTTGCAATCATGATTGGCAAT...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR GCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACGATTGCAGGTTAGGATaGGCACCAAATCATTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNDCRLG*APNHLA Trigger: AGCCAAATGATTTGGTGCGCATCCTAACCTGCAATC...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCGCGCACCAAATCATTTaGCTTATAGAGCTCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFAHQII*LIELNA Trigger: TGCATTGAGCTCTATAAGCCAAATGATTTGGTGCGC...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCATGTTCCTCCAGAGGTaGCTCATCTGCTCCTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ANKNTRLFYFCLNPVGICMFLQR*LICSLY Trigger: GTACAAGGAGCAGATGAGCCACCTCTGGAGGAACAT...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR TCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACAGTTGCTGCTTTCGTTaGAGTAAGTCACAGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNSCCFR*SKSQSH Trigger: ATGTGACTGTGACTTACTTCAACGAAAGCAGCAACT...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
||
| CDS-3UTR TCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACGTCTTATGGAAAATATaGTTGCAGGTTAGGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNVLWKI*LQVRMR Trigger: GCGCATCCTAACCTGCAATCATATTTTCCATAAGAC...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR TCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCCGAACAGCTGCCTCTTaGTCAGGAGTTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ANKNTRLFYFCLNPVGICRTAAS*SGVSSS Trigger: AGAAGATGAAACTCCTGATCAAGAGGCAGCTGTTCG...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCGAAATAGCCCACGGTTaGTGCCGTAATTATGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFEIAHG*CRNYEK Trigger: TTTTTCATAATTACGGCAGCAACCGTGGGCTATTTC...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCCGACTGTCCTCTTCATaGGGAGAGGCAGTATTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ANKNTRLFYFCLNPVGICRLSSS*GEAVLD Trigger: ATCTAATACTGCCTCTCCCCATGAAGAGGACAGTCG...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CCA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGACAGAATTTGCTTCATaGTTTACCAGCTGTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGTEFAS*FTSCRF Trigger: AAATCTACAGCTGGTAAACCATGAAGCAAATTCTGT...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR TCA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCAAAAATACCAGGAGCTaGAGAAAACTGTGTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTGNKTQATQSRNKVRLFKNTRS*RKLCLV Trigger: GACTAAACACAGTTTTCTTCAGCTCCTGGTATTTTT...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
||
| CDS-3UTR TCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCTTCAAGGTGCGCAGCTaGAGCTTTCCAATAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ANKNTRLFYFCLNPVGICFKVRS*SFPIAF Trigger: AAAAGCTATTGGAAAGCTTCAGCTGCGCACCTTGAA...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR GCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCATTGCCAATCATGATTaGAACAATGTCCCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ANKNTRLFYFCLNPVGICIANHD*NNVPST Trigger: GGTGCTGGGGACATTGTTGCAATCATGATTGGCAAT...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR TCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACACTTGGATGCCTCTTTaGATAGACTGCAGAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNTWMPL*IDCRIF Trigger: AAAAATTCTGCAGTCTATTCAAAGAGGCATCCAAGT...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCATCTTCTTCAAAGGTTaGGTTGTCAACATGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ANKNTRLFYFCLNPVGICIFFKG*VVNMGN Trigger: GTTCCCCATGTTGACAACCCAACCTTTGAAGAAGAT...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR GCA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCGAAATAGCCCACGGTTaGTGCCGTAATTATGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ANKNTRLFYFCLNPVGICEIAHG*CRNYEK Trigger: TTTTTCATAATTACGGCAGCAACCGTGGGCTATTTC...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CCA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACACAGAATTTGCTTCATaGTTTACCAGCTGTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: NTRLFYFCLNPVGICTGNTEFAS*FTSCRF Trigger: AAATCTACAGCTGGTAAACCATGAAGCAAATTCTGT...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| 3UTR CAA 72 bp | TTAAAAATGTTGCTATCACTATCACCAAGAGGAAACTaGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKMLLSLSPRGN*PMKNVMVSLWK Trigger: TTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCCTCTTGGTGATAGTGATAGCAACATTTTTAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS CCA 90 bp | TCGGGCGGTACCAGGACCCCGGAGACGGGCTCCAGCGGCGAGTCCTaGCCGTACACGCCCTCCTCGCTCAGCTCCCACACCGTGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGGTRTPETGSSGES*PYTPSSLSSHTVRF Trigger: GAACCGCACGGTGTGGGAGCTGAGCGAGGAGGGCGTGTACGGCCAGGACTCGCCGCTGGAGCCCGTCTCCGGGGTCCTGGTACCGCCCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS TCA 90 bp | ACACCGTGCGGTTCACTCCGGTGTGCGGAACCCGCCAGGACACGTTaGGGTACGCGGTCCACACGGCTTCGGCTCCCCGGGAACCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TPCGSLRCAEPARTR*GTRSTRLRLPGNRA Trigger: CGCCCGGTTCCCGGGGAGCCGAAGCCGTGTGGACCGCGTACCTCAACGTGTCCTGGCGGGTTCCGCACACCGGAGTGAACCGCACGGTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS GCA 90 bp | ACGCCCTCCTCGCTCAGCTCCCACACCGTGCGGTTCACTCCGGTGTaGGGAACCCGCCAGGACACGTTGAGGTACGCGGTCCACACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPSSLSSHTVRFTPV*GTRQDTLRYAVHTA Trigger: AGCCGTGTGGACCGCGTACCTCAACGTGTCCTGGCGGGTTCCGCACACCGGAGTGAACCGCACGGTGTGGGAGCTGAGCGAGGAGGGCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS TCA 90 bp | CCAGATGGATCTTGTCCGCGAAGGTGCAGCCTCCACCGCGTTGGATaGGGGCCAACCAAGATACTTGCACCGTGCTCCCCCAAACCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PDGSCPRRCSLHRVG*GPTKILAPCSPKPW Trigger: CCACGGTTTGGGGGAGCACGGTGCAAGTATCTTGGTTGGCCCTCATCCAACGCGGTGGAGGCTGCACCTTCGCGGACAAGATCCATCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS TCA 90 bp | GGTCCCAGGGAAGTTAAAGATGACCGCTCCAGAAGCCCCTCTCTCTaGAGCCAGATGGATCTTGTCCGCGAAGGTGCAGCCTCCACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: GPREVKDDRSRSPSL*SQMDLVREGAASTA Trigger: CGCGGTGGAGGCTGCACCTTCGCGGACAAGATCCATCTGGCTTCAGAGAGAGGGGCTTCTGGAGCGGTCATCTTTAACTTCCCTGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS GCA 90 bp | AAGGTGCAGCCTCCACCGCGTTGGATGAGGGCCAACCAAGATACTTaGACCGTGCTCCCCCAAACCGTGGGCACCGTGAAATTGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KVQPPPRWMRANQDT*TVLPQTVGTVKLVC Trigger: GCACACCAATTTCACGGTGCCCACGGTTTGGGGGAGCACGGTGCAAGTATCTTGGTTGGCCCTCATCCAACGCGGTGGAGGCTGCACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS CCA 90 bp | GAAGCCAGATGGATCTTGTCCGCGAAGGTGCAGCCTCCACCGCGTTaGATGAGGGCCAACCAAGATACTTGCACCGTGCTCCCCCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: EARWILSAKVQPPPR*MRANQDTCTVLPQT Trigger: GGTTTGGGGGAGCACGGTGCAAGTATCTTGGTTGGCCCTCATCCAACGCGGTGGAGGCTGCACCTTCGCGGACAAGATCCATCTGGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS-3UTR CAA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCTGCGGGTTACAGGCGTaGAGCGCCCCGGGCCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ANKNTRLFYFCLNPVGICCGLQA*SAPGPS Trigger: CGACGGGCCCGGGGCGCTCAACGCCTGTAACCCGCA...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS-3UTR CAA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACACCCGCCAGGACACGTaGAGGTACGCGGTCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: NTRLFYFCLNPVGICTGNTRQDT*RYAVHT Trigger: CGTGTGGACCGCGTACCTCAACGTGTCCTGGCGGGT...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS CCA 90 bp | CCGAACAGCTGCCTCTTGATCAGGAGTTTCATCTTCTTCAAAGGTTaGGTTGTCAACATGGGGAACAACATCCACGGCCACAGAATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PNSCLLIRSFIFFKG*VVNMGNNIHGHRIC Trigger: GCAAATTCTGTGGCCGTGGATGTTGTTCCCCATGTTGACAACCCAACCTTTGAAGAAGATGAAACTCCTGATCAAGAGGCAGCTGTTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS GCA 90 bp | TGCAGGTTAGGATGCGCACCAAATCATTTGGCTTATAGAGCTCAATaGACACAGCACAGCTATCTCCATCAGGGCCAATTTCCTTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CRLGCAPNHLAYRAQ*TQHSYLHQGQFPCL Trigger: GAGACAAGGAAATTGGCCCTGATGGAGATAGCTGTGCTGTGTGCATTGAGCTCTATAAGCCAAATGATTTGGTGCGCATCCTAACCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS CCA 90 bp | CCCAGCACCAAAATTTGCCATCTGTATCGTCTGGTTGCCCGTCTCTaGGGAATTGTAAATCACAACAGCATTGGCATTACTTCTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSTKICHLYRLVARL*GIVNHNSIGITSAC Trigger: GCAAGCAGAAGTAATGCCAATGCTGTTGTGATTTACAATTCCCCAGAGACGGGCAACCAGACGATACAGATGGCAAATTTTGGTGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
||
| CDS-3UTR CAA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGATCTGTATCGTCTGGTaGCCCGTCTCTGGGGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGICIVW*PVSGEL Trigger: CAATTCCCCAGAGACGGGCAACCAGACGATACAGAT...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
||
| CDS-3UTR CAA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACGTGGGCACCGTGAAATaGGTGTGCGGGTTACAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: NTRLFYFCLNPVGICTGNVGTVK*VCGLQA Trigger: CGCCTGTAACCCGCACACCAATTTCACGGTGCCCAC...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS-3UTR CAA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCGAAGCCAGATGGATCTaGTCCGCGAAGGTGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CTGNKTQATQSRNKVRLFEARWI*SAKVQP Trigger: AGGCTGCACCTTCGCGGACAAGATCCATCTGGCTTC...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS TCA 90 bp | CACCGCACTCACACCTTTCAGTCTTGGTGTAGTTGCTGCTTTCGTTaGAGTAAGTCACAGTCACATAGGCGTTCATTGAAAACGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HRTHTFQSWCSCCFR*SKSQSHRRSLKTML Trigger: CAGCATCGTTTTCAATGAACGCCTATGTGACTGTGACTTACTTCAACGAAAGCAGCAACTACACCAAGACTGAAAGGTGTGAGTGCGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
||
| CDS-3UTR CAA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCGCAGCCTCCACCGCGTaGGATGAGGGCCAACCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ANKNTRLFYFCLNPVGICAASTA*DEGQPR Trigger: TCTTGGTTGGCCCTCATCCAACGCGGTGGAGGCTGC...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS CCA 90 bp | GAAGCATATCCAGATGATGCAGTCTCACTGCGACTGTCCTCTTCATaGGGAGAGGCAGTATTAGATGCTTCATTAGAAACAGGAACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: EAYPDDAVSLRLSSS*GEAVLDASLETGTC Trigger: ACAAGTTCCTGTTTCTAATGAAGCATCTAATACTGCCTCTCCCCATGAAGAGGACAGTCGCAGTGAGACTGCATCATCTGGATATGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS CCA 90 bp | TTGTCAACATGGGGAACAACATCCACGGCCACAGAATTTGCTTCATaGTTTACCAGCTGTAGATTTTCATTTGCTGACTGCGCATGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSTWGTTSTATEFAS*FTSCRFSFADCACS Trigger: GGAACATGCGCAGTCAGCAAATGAAAATCTACAGCTGGTAAACCATGAAGCAAATTCTGTGGCCGTGGATGTTGTTCCCCATGTTGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CAA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACATGGGGATGACCTCATaGCGGGTCCCAGGGAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: NTRLFYFCLNPVGICTGNMGMTS*RVPGKL Trigger: TAACTTCCCTGGGACCCGCAATGAGGTCATCCCCAT...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS-3UTR CAA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGTCCTGCTTTGAGCTCTaGCATTTCGTAATCTTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGSCFEL*HFVIFE Trigger: CTCGAAGATTACGAAATGCAAGAGCTCAAAGCAGGA...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CAA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCTTGAGAATGTCACACTaGCACATGGGGCAAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTGNKTQATQSRNKVRLFLRMSH*HMGQVL Trigger: CAGGACTTGCCCCATGTGCAAGTGTGACATTCTCAA...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CAA 90 bp | GGAAACTTGCCTATGAAAAACGTTATGGTGAGTTTGTGGAAAACGGTACTGGGGTCAATTCCCAGAGCTTaGAGAATGTCACACTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GNLPMKNVMVSLWKTVLGSIPRA*RMSHLH Trigger: GTGCAAGTGTGACATTCTCAAAGCTCTGGGAATTGA...CCCCAGTACCGTTTTCCACAAACTCACCATAACGTTTTTCATAGGCAAGTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CAA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCGGCCAACCAAGATACTaGCACCGTGCTCCCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ANKNTRLFYFCLNPVGICGQPRY*HRAPPN Trigger: GTTTGGGGGAGCACGGTGCAAGTATCTTGGTTGGCC...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS-3UTR CAA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACCCCCAGCACCAAAATTaGCCATCTGTATCGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NTRLFYFCLNPVGICTGNPQHQN*PSVSSG Trigger: ACCAGACGATACAGATGGCAAATTTTGGTGCTGGGG...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
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| CDS-3UTR CAA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACTTGAGAATGTCACACTaGCACATGGGGCAAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NTRLFYFCLNPVGICTGNLRMSH*HMGQVL Trigger: CAGGACTTGCCCCATGTGCAAGTGTGACATTCTCAA...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR CAA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACCCACGGCCACAGAATTaGCTTCATGGTTTACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NTRLFYFCLNPVGICTGNPRPQN*LHGLPA Trigger: AGCTGGTAAACCATGAAGCAAATTCTGTGGCCGTGG...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR CAA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCCATCTTCTTCAAAGGTaGGGTTGTCAACATGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CTGNKTQATQSRNKVRLFHLLQR*GCQHGE Trigger: TTCCCCATGTTGACAACCCAACCTTTGAAGAAGATG...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR CAA 90 bp | AATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCACTGGGAACTGCGCACCAAATCATTaGGCTTATAGAGCTCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: NTRLFYFCLNPVGICTGNCAPNH*AYRAQC Trigger: GCATTGAGCTCTATAAGCCAAATGATTTGGTGCGCA...GTTCCCAGTGCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR CAA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCCCACGGCCACAGAATTaGCTTCATGGTTTACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ANKNTRLFYFCLNPVGICPRPQN*LHGLPA Trigger: AGCTGGTAAACCATGAAGCAAATTCTGTGGCCGTGG...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR CAA 90 bp | TGCACTGGGAACAAAACACAAGCCACACAAAGTAGAAATAAAGTGCGTCTTTTCTTTGTTCCTTTCAGATaGCCAATCATGATTGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: CTGNKTQATQSRNKVRLFFVPFR*PIMIAT Trigger: TGTTGCAATCATGATTGGCAATCTGAAAGGAACAAA...GAAAAGACGCACTTTATTTCTACTTTGTGTGGCTTGTGTTTTGTTCCCAGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR CAA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCTCCTGCTTTGAGCTCTaGCATTTCGTAATCTTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ANKNTRLFYFCLNPVGICSCFEL*HFVIFE Trigger: CTCGAAGATTACGAAATGCAAGAGCTCAAAGCAGGA...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS-3UTR CAA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCTGCGCACCAAATCATTaGGCTTATAGAGCTCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: ANKNTRLFYFCLNPVGICCAPNH*AYRAQC Trigger: GCATTGAGCTCTATAAGCCAAATGATTTGGTGCGCA...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS-3UTR CAA 90 bp | GCAAACAAAAATACACGTCTGTTCTATTTTTGTCTAAATCCTGTGGGAATTTGCCATCTTCTTCAAAGGTaGGGTTGTCAACATGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ANKNTRLFYFCLNPVGICHLLQR*GCQHGE Trigger: TTCCCCATGTTGACAACCCAACCTTTGAAGAAGATG...GCAAATTCCCACAGGATTTAGACAAAAATAGAACAGACGTGTATTTTTGTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS CAA 90 bp | CACACCGTGCGGTTCACTCCGGTGTGCGGAACCCGCCAGGACACGTaGAGGTACGCGGTCCACACGGCTTCGGCTCCCCGGGAACCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HTVRFTPVCGTRQDT*RYAVHTASAPREPG Trigger: GCCCGGTTCCCGGGGAGCCGAAGCCGTGTGGACCGCGTACCTCAACGTGTCCTGGCGGGTTCCGCACACCGGAGTGAACCGCACGGTGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS TCA 72 bp | GGTTCACTCCGGTGTGCGGAACCCGCCAGGACACGTTaGGGTACGCGGTCCACACGGCTTCGGCTCCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSLRCAEPARTR*GTRSTRLRLPG Trigger: CCCGGGGAGCCGAAGCCGTGTGGACCGCGTACCTCAACGTGTCCTGGCGGGTTCCGCACACCGGAGTGAACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS CAA 72 bp | CGGTTCACTCCGGTGTGCGGAACCCGCCAGGACACGTaGAGGTACGCGGTCCACACGGCTTCGGCTCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RFTPVCGTRQDT*RYAVHTASAPR Trigger: CCGGGGAGCCGAAGCCGTGTGGACCGCGTACCTCAACGTGTCCTGGCGGGTTCCGCACACCGGAGTGAACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS CAA 72 bp | GTGGGCACCGTGAAATTGGTGTGCGGGTTACAGGCGTaGAGCGCCCCGGGCCCGTCGGGCGGTACCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: VGTVKLVCGLQA*SAPGPSGGTRT Trigger: GGTCCTGGTACCGCCCGACGGGCCCGGGGCGCTCAACGCCTGTAACCCGCACACCAATTTCACGGTGCCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS GCA 72 bp | TCGCTCAGCTCCCACACCGTGCGGTTCACTCCGGTGTaGGGAACCCGCCAGGACACGTTGAGGTACGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLSSHTVRFTPV*GTRQDTLRYAV Trigger: GACCGCGTACCTCAACGTGTCCTGGCGGGTTCCGCACACCGGAGTGAACCGCACGGTGTGGGAGCTGAGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS CAA 72 bp | TGCACCGTGCTCCCCCAAACCGTGGGCACCGTGAAATaGGTGTGCGGGTTACAGGCGTTGAGCGCCCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CTVLPQTVGTVK*VCGLQALSAPG Trigger: GCCCGGGGCGCTCAACGCCTGTAACCCGCACACCAATTTCACGGTGCCCACGGTTTGGGGGAGCACGGTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS CAA 90 bp | CAAGATACTTGCACCGTGCTCCCCCAAACCGTGGGCACCGTGAAATaGGTGTGCGGGTTACAGGCGTTGAGCGCCCCGGGCCCGTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QDTCTVLPQTVGTVK*VCGLQALSAPGPSG Trigger: GCCCGACGGGCCCGGGGCGCTCAACGCCTGTAACCCGCACACCAATTTCACGGTGCCCACGGTTTGGGGGAGCACGGTGCAAGTATCTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS TCA 72 bp | TCTTGTCCGCGAAGGTGCAGCCTCCACCGCGTTGGATaGGGGCCAACCAAGATACTTGCACCGTGCTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SCPRRCSLHRVG*GPTKILAPCSP Trigger: GGGGGAGCACGGTGCAAGTATCTTGGTTGGCCCTCATCCAACGCGGTGGAGGCTGCACCTTCGCGGACAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS CAA 72 bp | GCCTCCACCGCGTTGGATGAGGGCCAACCAAGATACTaGCACCGTGCTCCCCCAAACCGTGGGCACCGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASTALDEGQPRY*HRAPPNRGHRE Trigger: TTCACGGTGCCCACGGTTTGGGGGAGCACGGTGCAAGTATCTTGGTTGGCCCTCATCCAACGCGGTGGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
||
| CDS GCA 72 bp | CCTCCACCGCGTTGGATGAGGGCCAACCAAGATACTTaGACCGTGCTCCCCCAAACCGTGGGCACCGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PPPRWMRANQDT*TVLPQTVGTVK Trigger: TTTCACGGTGCCCACGGTTTGGGGGAGCACGGTGCAAGTATCTTGGTTGGCCCTCATCCAACGCGGTGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS CAA 72 bp | GCTCCAGAAGCCCCTCTCTCTGAAGCCAGATGGATCTaGTCCGCGAAGGTGCAGCCTCCACCGCGTTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: APEAPLSEARWI*SAKVQPPPRWM Trigger: CATCCAACGCGGTGGAGGCTGCACCTTCGCGGACAAGATCCATCTGGCTTCAGAGAGAGGGGCTTCTGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS CAA 90 bp | GAAGGTGCAGCCTCCACCGCGTTGGATGAGGGCCAACCAAGATACTaGCACCGTGCTCCCCCAAACCGTGGGCACCGTGAAATTGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: EGAASTALDEGQPRY*HRAPPNRGHREIGV Trigger: CACACCAATTTCACGGTGCCCACGGTTTGGGGGAGCACGGTGCAAGTATCTTGGTTGGCCCTCATCCAACGCGGTGGAGGCTGCACCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS CAA 90 bp | AAGATGACCGCTCCAGAAGCCCCTCTCTCTGAAGCCAGATGGATCTaGTCCGCGAAGGTGCAGCCTCCACCGCGTTGGATGAGGGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: KMTAPEAPLSEARWI*SAKVQPPPRWMRAN Trigger: GTTGGCCCTCATCCAACGCGGTGGAGGCTGCACCTTCGCGGACAAGATCCATCTGGCTTCAGAGAGAGGGGCTTCTGGAGCGGTCATCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS CAA 72 bp | ATGGATCTTGTCCGCGAAGGTGCAGCCTCCACCGCGTaGGATGAGGGCCAACCAAGATACTTGCACCGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: MDLVREGAASTA*DEGQPRYLHRA Trigger: AGCACGGTGCAAGTATCTTGGTTGGCCCTCATCCAACGCGGTGGAGGCTGCACCTTCGCGGACAAGATCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS CAA 90 bp | CCCGAACAGCTGCCTCTTGATCAGGAGTTTCATCTTCTTCAAAGGTaGGGTTGTCAACATGGGGAACAACATCCACGGCCACAGAATTTG | + |
|
Preference number: 6 (lower is better) Translates to: PEQLPLDQEFHLLQR*GCQHGEQHPRPQNL Trigger: CAAATTCTGTGGCCGTGGATGTTGTTCCCCATGTTGACAACCCAACCTTTGAAGAAGATGAAACTCCTGATCAAGAGGCAGCTGTTCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS CCA 72 bp | TGCCTCTTGATCAGGAGTTTCATCTTCTTCAAAGGTTaGGTTGTCAACATGGGGAACAACATCCACGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CLLIRSFIFFKG*VVNMGNNIHGH Trigger: GTGGCCGTGGATGTTGTTCCCCATGTTGACAACCCAACCTTTGAAGAAGATGAAACTCCTGATCAAGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS CAA 72 bp | CTGCCTCTTGATCAGGAGTTTCATCTTCTTCAAAGGTaGGGTTGTCAACATGGGGAACAACATCCACGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPLDQEFHLLQR*GCQHGEQHPRP Trigger: TGGCCGTGGATGTTGTTCCCCATGTTGACAACCCAACCTTTGAAGAAGATGAAACTCCTGATCAAGAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS CAA 90 bp | CCAAGGCTTAGCAGTGTTGGTAAACTCAGTGTTGTAATCACAAGCTaGGTAGTTACCGTTCTTAGGGATACCCACCACTCCCATAGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: PRLSSVGKLSVVITS*VVTVLRDTHHSHSV Trigger: AACGCTATGGGAGTGGTGGGTATCCCTAAGAACGGTAACTACCAAGCTTGTGATTACAACACTGAGTTTACCAACACTGCTAAGCCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
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| CDS CAA 90 bp | AGGTTGGGTTGTCAACATGGGGAACAACATCCACGGCCACAGAATTaGCTTCATGGTTTACCAGCTGTAGATTTTCATTTGCTGACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLGCQHGEQHPRPQN*LHGLPAVDFHLLTA Trigger: CGCAGTCAGCAAATGAAAATCTACAGCTGGTAAACCATGAAGCAAATTCTGTGGCCGTGGATGTTGTTCCCCATGTTGACAACCCAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS GCA 72 bp | GGATGCGCACCAAATCATTTGGCTTATAGAGCTCAATaGACACAGCACAGCTATCTCCATCAGGGCCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: GCAPNHLAYRAQ*TQHSYLHQGQF Trigger: AAATTGGCCCTGATGGAGATAGCTGTGCTGTGTGCATTGAGCTCTATAAGCCAAATGATTTGGTGCGCATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS GCA 72 bp | CAGAATTTTTGTTCCTTTCAGATTGCCAATCATGATTaGAACAATGTCCCCAGCACCCGGGTGAGACATGGG | + |
|
Preference number: 6 (lower is better) Translates to: QNFCSFQIANHD*NNVPSTRVRHG Trigger: CCCATGTCTCACCCGGGTGCTGGGGACATTGTTGCAATCATGATTGGCAATCTGAAAGGAACAAAAATTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS CCA 72 bp | CCAGATGATGCAGTCTCACTGCGACTGTCCTCTTCATaGGGAGAGGCAGTATTAGATGCTTCATTAGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: PDDAVSLRLSSS*GEAVLDASLET Trigger: TGTTTCTAATGAAGCATCTAATACTGCCTCTCCCCATGAAGAGGACAGTCGCAGTGAGACTGCATCATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS TCA 72 bp | ACTGCAGAATTTTTGTTCCTTTCAGATTGCCAATCATaGTTGCAACAATGTCCCCAGCACCCGGGTGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: TAEFLFLSDCQS*LQQCPQHPGET Trigger: TGTCTCACCCGGGTGCTGGGGACATTGTTGCAATCATGATTGGCAATCTGAAAGGAACAAAAATTCTGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113026.2 |
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| CDS CCA 72 bp | GGAGTTTCATCTTCTTCAAAGGTTGGGTTGTCAACATaGGGAACAACATCCACGGCCACAGAATTTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GVSSSSKVGLST*GTTSTATEFAS Trigger: TGAAGCAAATTCTGTGGCCGTGGATGTTGTTCCCCATGTTGACAACCCAACCTTTGAAGAAGATGAAACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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| CDS CAA 72 bp | AGCAGTGTTGGTAAACTCAGTGTTGTAATCACAAGCTaGGTAGTTACCGTTCTTAGGGATACCCACCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSVGKLSVVITS*VVTVLRDTHHS Trigger: GGAGTGGTGGGTATCCCTAAGAACGGTAACTACCAAGCTTGTGATTACAACACTGAGTTTACCAACACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
||
| CDS TCA 72 bp | CACACCTTTCAGTCTTGGTGTAGTTGCTGCTTTCGTTaGAGTAAGTCACAGTCACATAGGCGTTCATTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HTFQSWCSCCFR*SKSQSHRRSLK Trigger: TTTCAATGAACGCCTATGTGACTGTGACTTACTTCAACGAAAGCAGCAACTACACCAAGACTGAAAGGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
||
| CDS CCA 72 bp | AAAATTTGCCATCTGTATCGTCTGGTTGCCCGTCTCTaGGGAATTGTAAATCACAACAGCATTGGCATTACT | + |
|
Preference number: 6 (lower is better) Translates to: KICHLYRLVARL*GIVNHNSIGIT Trigger: AGTAATGCCAATGCTGTTGTGATTTACAATTCCCCAGAGACGGGCAACCAGACGATACAGATGGCAAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113027.8 |
||
| CDS CAA 72 bp | TGTCAACATGGGGAACAACATCCACGGCCACAGAATTaGCTTCATGGTTTACCAGCTGTAGATTTTCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: CQHGEQHPRPQN*LHGLPAVDFHL Trigger: CAAATGAAAATCTACAGCTGGTAAACCATGAAGCAAATTCTGTGGCCGTGGATGTTGTTCCCCATGTTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS TCA 72 bp | CCTACTTCGATGACCATTGTGACTTGGATGCCTCTTTaGATAGACTGCAGAATTTTTGTTCCTTTCAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: PTSMTIVTWMPL*IDCRIFVPFRL Trigger: CAATCTGAAAGGAACAAAAATTCTGCAGTCTATTCAAAGAGGCATCCAAGTCACAATGGTCATCGAAGTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
||
| CDS GCA 72 bp | TCGAGCAGAATAAAAGATGAAATAGCCCACGGTTGCTaGCGTAATTATGAAAAAGGACACAGAAACGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSRIKDEIAHGC*RNYEKGHRNEE Trigger: TTCTTCGTTTCTGTGTCCTTTTTCATAATTACGGCAGCAACCGTGGGCTATTTCATCTTTTATTCTGCTCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113026.2 ENSMUST00000113027.8 |
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